Evaluation of Medicinal Uses, Phytochemistry and Pharmacological Properties of Dioscorea Sylvatica (Dioscoreaceae)
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Diversification Into Novel Habitats in the Africa Clade of Dioscorea (Dioscoreaceae): Erect Habit and Elephant’S Foot Tubers Olivier Maurin1,2, A
Maurin et al. BMC Evolutionary Biology (2016) 16:238 DOI 10.1186/s12862-016-0812-z RESEARCHARTICLE Open Access Diversification into novel habitats in the Africa clade of Dioscorea (Dioscoreaceae): erect habit and elephant’s foot tubers Olivier Maurin1,2, A. Muthama Muasya3*, Pilar Catalan4,5, Eugene Z. Shongwe1, Juan Viruel 6,7, Paul Wilkin 2 and Michelle van der Bank1 Abstract Background: Dioscorea is a widely distributed and highly diversified genus in tropical regions where it is represented by ten main clades, one of which diversified exclusively in Africa. In southern Africa it is characterised by a distinct group of species with a pachycaul or “elephant’sfoot” structure that is partially to fully exposed above the substrate. In contrast to African representatives of the genus from other clades, occurring mainly in forest or woodland, the pachycaul taxa and their southern African relatives occur in diverse habitats ranging from woodland to open vegetation. Here we investigate patterns of diversification in the African clade, time of transition from forest to more open habitat, and morphological traits associated with each habitat and evaluate if such transitions have led to modification of reproductive organs and mode of dispersal. Results: The Africa clade originated in the Oligocene and comprises four subclades. The Dioscorea buchananii subclade (southeastern tropical Africa and South Africa) is sister to the East African subclade, which is respectively sister to the recently evolved sister South African (e. g., Cape and Pachycaul) subclades. The Cape and Pachycaul subclades diversified in the east of the Cape Peninsula in the mid Miocene, in an area with complex geomorphology and climate, where the fynbos, thicket, succulent karoo and forest biomes meet. -
Zimbabwe-Mozambique)
A peer-reviewed open-access journal PhytoKeys 145: 93–129 (2020) Plant checklist for the Bvumba Mountains 93 doi: 10.3897/phytokeys.145.49257 RESEARCH ARTICLE http://phytokeys.pensoft.net Launched to accelerate biodiversity research Mountains of the Mist: A first plant checklist for the Bvumba Mountains, Manica Highlands (Zimbabwe-Mozambique) Jonathan Timberlake1, Petra Ballings2,3, João de Deus Vidal Jr4, Bart Wursten2, Mark Hyde2, Anthony Mapaura4,5, Susan Childes6, Meg Coates Palgrave2, Vincent Ralph Clark4 1 Biodiversity Foundation for Africa, 30 Warren Lane, East Dean, E. Sussex, BN20 0EW, UK 2 Flora of Zimbabwe & Flora of Mozambique projects, 29 Harry Pichanick Drive, Alexandra Park, Harare, Zimbabwe 3 Meise Botanic Garden, Bouchout Domain, Nieuwelaan 38, 1860, Meise, Belgium 4 Afromontane Research Unit & Department of Geography, University of the Free State, Phuthaditjhaba, South Africa 5 National Her- barium of Zimbabwe, Box A889, Avondale, Harare, Zimbabwe 6 Box BW53 Borrowdale, Harare, Zimbabwe Corresponding author: Vincent Ralph Clark ([email protected]) Academic editor: R. Riina | Received 10 December 2019 | Accepted 18 February 2020 | Published 10 April 2020 Citation: Timberlake J, Ballings P, Vidal Jr JD, Wursten B, Hyde M, Mapaura A, Childes S, Palgrave MC, Clark VR (2020) Mountains of the Mist: A first plant checklist for the Bvumba Mountains, Manica Highlands (Zimbabwe- Mozambique). PhytoKeys 145: 93–129. https://doi.org/10.3897/phytokeys.145.49257 Abstract The first comprehensive plant checklist for the Bvumba massif, situated in the Manica Highlands along the Zimbabwe-Mozambique border, is presented. Although covering only 276 km2, the flora is rich with 1250 taxa (1127 native taxa and 123 naturalised introductions). -
Metabolomics of Dioscorea Spp. (Yam): Biochemical Diversity of an Understudied and Underutilised Crop Elliott J. Price
Metabolomics of Dioscorea spp. (Yam): Biochemical diversity of an understudied and underutilised crop Elliott J. Price This thesis was submitted for the degree of Doctor of Philosophy at Royal Holloway University of London, December 2016 Declaration of Authorship I, Elliott Price, hereby declare that the work presented in this thesis is original work of the author unless otherwise stated. Original material used in the creation of this thesis has not been previously submitted either in part or whole for a degree of any description from any institution. Signed: Abstract The genus Dioscorea comprises over 600 monocot plants commonly termed “yam”. Of these, five to ten species are cultivated; their edible tubers providing livelihood for ~100 million people. Production occurs almost exclusively in Low Income Food Deficit Countries (LIFDCs) and as such yams are vital for food security. A further fifteen to thirty species are grown, or harvested from the wild, to provide precursors for the industrial production of steroids, with an annual turnover estimated at ~$500-1000 million. In addition, numerous species are widely used in traditional medicines and over-harvesting has endangered many species. Yams have high-yield potential and high market value potential yet current breeding of yam is hindered by a lack of genomic information and genetic resources. New tools are needed to modernise breeding strategies and unlock the potential of yam to improve livelihood in LIFDCs. Furthermore, whilst the steroidal precursors of yams have been widely studied, limited research has been conducted on central metabolism of the crop. Recent literature highlighted that experimental flaws, analytical miscalculations and technical imprecision plagues historic studies providing impetus for re-investigation of Dioscorea using modern biochemical techniques. -
A Plastid Gene Phylogeny of the Yam Genus, Dioscorea: Roots, Fruits and Madagascar
Systematic Botany (2005), 30(4): pp. 736–749 ᭧ Copyright 2005 by the American Society of Plant Taxonomists A Plastid Gene Phylogeny of the Yam Genus, Dioscorea: Roots, Fruits and Madagascar PAUL WILKIN,1,6 PETER SCHOLS,2 MARK W. C HASE,1 KONGKANDA CHAYAMARIT,3 CAROL A. FURNESS,1 SUZY HUYSMANS,2 FRANCK RAKOTONASOLO,4 ERIK SMETS,2 and CHIRDSAK THAPYAI5 1Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AB, U.K.; 2Laboratory of Plant Systematics, Institute of Botany and Microbiology, K.U.Leuven, Kasteelpark Arenberg 31, B-3001 Leuven, Belgium; 3Forest Herbarium, 61 Phahonyothin Rd., Chatuchak, Bangkok 10900 Thailand; 4Parc Botanique et Zoologique de Tsimbazaza, BP 4096, Antananarivo, Madagascar; 5Biology Department, Faculty of Science, Naresuan University, Muang District, Phitsanulok 65000, Thailand 6Author for correspondence ([email protected]) Communicating Editor: Alan W. Meerow ABSTRACT. Following recent phylogenetic studies of the families and genera of Dioscoreales, the identification of mono- phyletic infrageneric taxa in the pantropical genus Dioscorea is a priority. A phylogenetic analysis based on sequence data from the plastid genes rbcL and matK is presented, using 67 species of Dioscorea and covering all the main Old World and selected New World lineages. The analysis used 14 outgroup taxa, including Trichopus Gaertn., Tacca J.R. & G. Forster, Stenomeris Planch., Burmannia L. and Thismia Griff. The main findings are: a) that a clade of rhizomatous taxa is sister to the rest of Dioscorea; b) the main Old World groups (such as the right-twining D. sect. Enantiophyllum) are monophyletic and c) there are two distinct lineages among the endemic Malagasy taxa. -
Dioscorea, Dioscoreaceae
Journal of Biogeography (J. Biogeogr.) (2016) 43, 750–762 – ORIGINAL Late Cretaceous Early Eocene origin of ARTICLE yams (Dioscorea, Dioscoreaceae) in the Laurasian Palaearctic and their subsequent Oligocene–Miocene diversification Juan Viruel1,2, Jose Gabriel Segarra-Moragues3, Lauren Raz4,Felix Forest5, Paul Wilkin5, Isabel Sanmartın6 and Pilar Catalan2,7* 1Departamento Biologıa Vegetal y Ecologıa, ABSTRACT Facultad de Biologıa, Universidad de Sevilla, Aim Dioscorea (Dioscoreaceae) is a predominantly pantropical genus (< 600 Sevilla 41012, Spain, 2Departamento de species) that includes the third most important tropical tuber crop and species Ciencias Agrarias y del Medio Natural, Escuela Politecnica Superior-Huesca, of pharmacological value. Fossil records from both the Northern and Southern Universidad de Zaragoza, 22071 Huesca, Hemispheres were used to test hypotheses about the origin of the genus Dios- Spain, 3Departamento de Biologıa Vegetal, corea, and to examine potential macroevolutionary processes that led to its Facultad de Ciencias Biologicas, Universitat current distribution. de Valencia, E-46100 Valencia, Spain, Location Pantropical distribution. 4Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogota, Colombia, Methods Divergence times were estimated using the most comprehensive 5Royal Botanic Gardens, Kew, Richmond, phylogeny of the group published to date based on plastid sequences and fossil Surrey, TW9 3AB, UK, 6Real Jardın Botanico calibrations, applying a relaxed-clock model approach. Ancestral areas and (RJB-CSIC), 28014 Madrid, Spain, 7Institute range shifts were reconstructed using time-stratified likelihood-based models, of Biology, Tomsk State University, Tomsk reflecting past continental connectivity and biogeographical models incorporat- 634050, Russia ing the spatial range of fossils. Results Fossil-informed biogeographical analysis supported colonization of the Nearctic by ancient yam lineages from the western Palaearctic and subsequent migration to the South. -
An Inventory of Useful Threatened Plant Species in Vhembe Biosphere Reserve, Limpopo Province, South Africa
BIODIVERSITAS ISSN: 1412-033X Volume 21, Number 5, May 2020 E-ISSN: 2085-4722 Pages: 2146-2158 DOI: 10.13057/biodiv/d210543 An inventory of useful threatened plant species in Vhembe Biosphere Reserve, Limpopo Province, South Africa LUAMBO JEFFREY RAMARUMO♥, ALFRED MAROYI Department of Botany, Faculty of Sciences and Agriculture, University of Fort Hare. Private Bag X1314, Alice, 5700, South Africa. Tel.: +27-72-550 5589, email: [email protected] Manuscript received: 10 April 2020. Revision accepted: 22 April 2020. Abstract. Ramarumo LJ, Maroyi A. 2020. An inventory of useful threatened plant species in Vhembe Biosphere Reserve, Limpopo Province, South Africa. Biodiversitas 21: 2146-2158. Scientists and conservation managers are seeking to understand and monitor plant species that are likely to be on the verge of extinction risk. Monitoring of threatened plants’ extinction risk can be better achieved through insights about indigenous knowledge dynamics associated with those species. This study aimed to document detailed information about useful threatened plant species in the Vhembe Biosphere Reserve, Limpopo Province, South Africa. Data was collected through interviews with 203 participants and literally counting of individuals as per the IUCN’s Red List Criteria. A total of 13 useful and native threatened plants belonging to 12 families were recorded. The majority of the threatened plant species were being used for medicinal purposes only (46.0%) followed by the mixture of medicinal and ornamentals (23.0%). The frequently cited useful threatened species with UV > 0.024, RFC > 0.059 and FL > 5.911%, includes Asparagus sekukuniensis, Bowiea volubilis, Brackenridgea zanguebarica, Ocotea bullata, Rhynchosia vendae, Siphonochilus aethiopicus and Warburgia salutaris. -
000000874.Sbu.Pdf
SSStttooonnnyyy BBBrrrooooookkk UUUnnniiivvveeerrrsssiiitttyyy The official electronic file of this thesis or dissertation is maintained by the University Libraries on behalf of The Graduate School at Stony Brook University. ©©© AAAllllll RRRiiiggghhhtttsss RRReeessseeerrrvvveeeddd bbbyyy AAAuuuttthhhooorrr... Form, Function, and Phylogeny: Angiosperm Leaf Trait Evolution, with a Case Study in the Genus Dioscorea A Dissertation Presented by Ramona Lynn Walls to The Graduate School in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Ecology and Evolution Stony Brook University December 2009 Copyright by Ramona Lynn Walls 2009 Stony Brook University The Graduate School Ramona Lynn Walls We, the dissertation committee for the above candidate for the Doctor of Philosophy Degree, hereby recommend acceptance of this dissertation. R. Geeta - Dissertation Advisor Associate Professor, Department of Ecology and Evolution, Stony Brook University Massimo Pigliucci - Chairperson of the Defense Professor, Department of Ecology and Evolution, Stony Brook University Catherine Graham Assistant Professor, Department of Ecology and Evolution, Stony Brook University Manuel Lerdau Professor, Departments of Environmental Sciences and Biology, University of Virginia Noel Michele Holbrook Professor, Department of Organismic and Evolutionary Biology, Harvard University This dissertation is accepted by the Graduate School Lawrence Martin Dean of the Graduate School ii Abstract of the Dissertation Form, function, and phylogeny: Angiosperm leaf trait evolution, with a case study in the genus Dioscorea By Ramona Lynn Walls Doctor of Philosophy in Ecology and Evolution Stony Brook University 2009 Broad-scale correlations among leaf traits or between leaf traits and the environment support the hypothesis that natural selection in response to climate has played a major role in plant diversification. -
Growing Rare Plants: a Practical Handbook on Propagating the Threatened Plants of Southern Africa
GROWINGGROWING RARERARE PLANTSPLANTS a practical handbook on propagating the threatened plants of southern Africa GROWINGGROWING RARERARE PLANTSPLANTS a practical handbook on propagating the threatened plants of southern Africa by Geoff Nichols with contributions by Mike Bingham, Neville Brown, John and Sandie Burrows, Gareth Chittenden, Neil Crouch, Graham Duncan, Trevor Edwards, Mark Gillmer, Anthony Hitchcock, Isabel Johnson, Alex Manana, Gavin Macdonald, Ian Oliver, Koos Roux, Guy Upfold, Ernst van Jaarsveld, Deon Viljoen, and Werner Voigt Southern African Botanical Diversity Network Report No. 36 •2005• Recommended citation format NICHOLS, G. 2005. Growing rare plants: a practical handbook on propagating the threatened plants of southern Africa. Southern African Botanical Diversity Network Report No. 36. SABONET, Pretoria. Citation of special features and quotations JOHNSON, I. & TARR, B. 2005. Gerbera aurantiaca: The Hilton daisy. In G. Nichols, Growing rare plants: a practical hand- book on propagating the threatened plants of southern Africa. Southern African Botanical Diversity Network Report No. 36. SABONET, Pretoria. pp. 78–79. Produced and published by Southern African Botanical Diversity Network (SABONET) c/o South African National Biodiversity Institute, Private Bag X101, 0001, Pretoria and Etwekwini Municipality Parks, Leisure & Cemeteries Department Parks, Recreation & Culture Unit P O Box 3740 Durban 4000 Printed in 2005 in the Republic of South Africa by Capture Press, Pretoria, (27) 12 349-1802 ISBN 1-919976-17-5 © 2005 SABONET. All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means without the permission of the copyright holder. Editor-in-chief: Marthina Mössmer Subeditors: Lidia Gibson, Hanlie van Heerden and Alexis Symonds Text design and layout: Suzanne Olivier, Antworks Layout and Design, Pretoria Cover design: Suzanne Olivier, Antworks Layout and Design Front cover: Back cover: Photo credits: All photographs © 2005 Geoff Nichols, except where noted otherwise in captions. -
Red Listed Medicinal Plants of South Africa: Status, Trends, and Assessment Challenges
South African Journal of Botany 86 (2013) 23–35 Contents lists available at SciVerse ScienceDirect South African Journal of Botany journal homepage: www.elsevier.com/locate/sajb Red Listed medicinal plants of South Africa: Status, trends, and assessment challenges V.L. Williams a,⁎, J.E. Victor b, N.R. Crouch c,d a School of Animal Plant and Environmental Sciences, University of the Witwatersrand, Private Bag 3, Wits 2050, South Africa b National Herbarium, SANBI, Private Bag X101, Pretoria 0001, South Africa c Ethnobotany Unit, SANBI, PO Box 52099, Berea Road, 4007, South Africa d School of Chemistry and Physics, University of KwaZulu-Natal, 4041 Durban, South Africa article info abstract Article history: In 2009, South Africa completed the IUCN Red List assessments of 20,456 indigenous vascular plant taxa. During Received 8 March 2012 that process, medicinal plant species (especially those sold in informal muthi markets) were identified so that Received in revised form 22 September 2012 potential extinction risks posed to these species could be assessed. The present study examines and analyses Accepted 24 January 2013 the recently documented threat statuses of South African ethnomedicinal taxa, including the number of species Available online 28 February 2013 used, revealing family richness and the degree of endemism, and calculates the Red List Index (RLI) of species Edited by B-E Van Wyk survival to measure the relative degree of threat to medicinal species. Approximately 2062 indigenous plant spe- cies (10% of the total flora) have been recorded as being used for traditional medicine in South Africa, of which it Keywords: has been determined that 82 species (0.4% of the total national flora) are threatened with extinction at a national Extinction level in the short and medium terms and a further 100 species are of conservation concern (including two species GSPC already extinct in the wild). -
Dioscoreaceae) Indicate Four Origins of Yams in 2 the Neotropics Since the Eocene
bioRxiv preprint doi: https://doi.org/10.1101/224790; this version posted November 29, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Title: Time calibrated tree of Dioscorea (Dioscoreaceae) indicate four origins of yams in 2 the Neotropics since the Eocene 3 4 Ricardo S. Couto1,5, Aline C. Martins2, Mônica Bolson2, Rosana C. Lopes3, Eric C. Smidt2 & 5 João M. A. Braga4 6 1. Museu Nacional, Universidade Federal do Rio de Janeiro. Quinta da Boa Vista s.n., São 7 Cristovão, 20940-040, Rio de Janeiro, RJ, Brazil. 8 2. Department of Botany, Universidade Federal do Paraná, Curitiba-PR, Brazil 9 3. Universidade Federal do Rio de Janeiro. Rua Prof. Rodolfo Paulo Rocco, 21941-490, Rio de 10 Janeiro, RJ, Brazil. 11 4. Instituto de Pesquisas Jardim Botânico do Rio de Janeiro. Rua Pacheco Leão 915, 22460-030, 12 Rio de Janeiro, RJ, Brazil. 13 5. Current adress: Universidade Iguaçu, Faculdade de Ciências Biológicas e da Saúde, Nova 14 Iguaçu, RJ, Brazil. 15 Correspondence author: [email protected] 16 17 Running head: Origins of yams in the Neotropics 18 19 20 21 22 23 24 25 26 27 1 bioRxiv preprint doi: https://doi.org/10.1101/224790; this version posted November 29, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 28 ABSTRACT 29 30 The yam genus Dioscorea comprises circa 650 species of tropical vines with starch rich tubers, 31 usefull as an energy source and often containing secondary metabolites. -
In Vitro Propagation of Wild Yams, Dioscorea Oppositifolia (Linn) and Dioscorea Pentaphylla (Linn)
African Journal of Biotechnology Vol. 6 (20), pp. 2348-2352, 18 October 2007 Available online at http://www.academicjournals.org/AJB ISSN 1684–5315 © 2007 Academic Journals Full Length Research Paper In vitro propagation of wild yams, Dioscorea oppositifolia (Linn) and Dioscorea pentaphylla (Linn) Poornima G. N. and Ravishankar Rai. V.* Department of Studies in Applied Botany and Biotechnology, University of Mysore, Manasagagotri Mysore-570006 India. Accepted 30 August, 2007 In vitro propagation of two wild yams, Dioscorea oppositifolia and Dioscorea pentaphylla, is reported. Multiple shoots were initiated from nodal explants on Murashige and Skoog (MS) medium supplemented with 8.8 µM 6-benzylaminopurine (BAP) and 0.3% (w/v) activated charcoal. Root induction was also achieved simultaneously from the base of the shoots in the same medium. Individual shoots with a minimum of one node were excised and rooted in vitro on MS medium with 2.67 µM -naphthaleneacetic acid (NAA) or ex vitro rooted on by treatment with 49 µM indole-3-butyric acid (IBA) for 30 min. Regenerants acclimatized in soil-rite showed vigorous shoot growth (within 2 weeks) and after 5 - 6 months were suitable for planting. Plantlets also developed tubers on MS medium with 8.8 µM 6-benzylaminopurine (BAP). Key words: Dioscorea, diosgenin, microtuber, nodal culture. INTRODUCTION The genus Dioscorea includes over 600 species (Ayensu, the clonal propagation through in vitro production of 1972), and is of considerable economic importance. A microtubers in D. abyssinica (Martine and Cappadocia, number of Dioscorea wild species are the source of 1991), D. alata (Mantell and Hugo, 1989; Martine and compounds used in the synthesis of sex hormones and Cappadocia, 1991; John et al., 1993; Jasik and Mantell, corticosteroids (Coursey, 1967) and cultivated species 2000), D. -
Sina Morufu Omosowon
THE ENANTIOPHYLLUM CLADE OF DIOSCOREA IN AFRICA: SYSTEMATICS, DISTRIBUTION AND CONSERVATION ASSESSMENT Sina Morufu Omosowon A thesis submitted for the degree of Doctor of Philosophy from the Department of Life Sciences, Imperial College London March 2018 1 Copyright Statement The copyright of this thesis rests with the author and is made available under a Creative Commons Attribution-Non-Commercial-No Derivatives licence. Researchers are free to copy, distribute or transmit the thesis on the condition that they attribute it, that they do not use it for commercial purposes and that they do not alter, transform or build upon it. For any reuse or distribution, researchers must make clear to others the licence terms of this work. 2 ABSTRACT Yams belong to the Dioscorea L. which is by far the largest genus in Dioscoreaceae with over 600 species and the fourth most important tuber crop in economic terms after potatoes, cassava and sweet potatoes. Yams are important food plants in many parts of the world, especially in West Africa, which produces about 93% of the World production. Dioscorea cayennensis and D. rotundata, which are collectively referred to as Guinea yams, are the most important cultivated yams native to Africa. Guinea yams belong to the Enantiophyllum clade which contains species with stems twining to the right. Despite the importance of Guinea yams, their relationship within the clade is poorly understood. In order trace the wild ancestors of the Guinea yams, a phylogenetic analysis based on sequence data from six plastid genes using 46 accessions of Dioscorea containing 12 of the 21 species of Enantiophyllum in Africa was carried out.