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File Transfer
File Transfer Joon Kim PICSciE Research Computing Workshop Department of Chemistry 10/30/2017 Introduction Hyojoon (Joon) Kim. Ph.D. Cyber Infrastructure Engineer Role: Design & build a campus network and infrastructure that will better support our researchers 2 Our goal today • Overview of widely used tools • Learn about data transfer basics • Pick the right tool for your job • Know what to expect • Learn about Globus • Q&A 3 Data transfer Data Data source destination This part is our topic! 4 Why do we care? Without good practice, you will waste time and effort 1. Start data transfer using SCP at 10pm. Usually takes 10 hours. 2. At 2am, there was a brief 1-minute network outage. Transfer job aborted. 3. Arrive 8am in the morning. See the damage. Start again, which will take 10 hours. 4. Lost a day of work. Time Effort 5 Why do we care? Without good practice, you will waste time and effort 1. Start data transfer using SCP at 10pm. Usually takes 10 hours. Really? Are you SURE that’s the best? Time Effort 6 We want you to Focus on your research, not on transferring data around Time Effort 7 Data Transfer Tools 8 Transfer tools What transfer tool do you use? 9 What we normally see 10 Secure Copy (SCP) • Secure Copy (SCP) • Uses SSH for authentication and data transfer (TCP port 22) • Unix-based systems (including Mac OS X): Should have it by default • Windows: WinSCP (https://winscp.net/eng/download.php) 11 Secure Copy (SCP) • Secure Copy (SCP) • Uses SSH for authentication and data transfer (TCP port 22) • Unix-based systems (including Mac OS X): Should have it by default • Windows: WinSCP (https://winscp.net/eng/download.php) 12 rsync • rsync (rsync over SSH) • Sync files and directories between two endpoints. -
IRIX® 6.5.19 Update Guide
IRIX® 6.5.19 Update Guide 1600 Amphitheatre Pkwy. Mountain View, CA 94043-1351 Telephone (650) 960-1980 FAX (650) 961-0595 February 2003 Dear Valued Customer, SGI® is pleased to present the new IRIX® 6.5.19 maintenance and feature release. Starting with IRIX® 6.5, SGI created a new software upgrade strategy, which delivers both the maintenance (6.5.19m) and feature (6.5.19f) streams to our support contract customers. This upgrade is part of a family of releases that periodically enhances IRIX 6.5. There are several benefits to this release strategy: it provides periodic fixes to IRIX, it assists in managing upgrades, and it supports all platforms. Additional information on this strategy and how it affects you is included in the updated Installation Instructions manual contained in this package. If you need assistance, please visit the Supportfolio™ online website at http://support.sgi.com/ or contact your local support provider. In conjunction with the release of IRIX® 6.5.15, SGI added to the existing life cycle management categories the Limited Support Mode that customizes services we deliver to our users. This new support mode is targeted for open source products. We now offer eight modes of service 2 for software supported by SGI: Active, Maintenance, Limited, Legacy, Courtesy, Divested, Retired, and Expired. Active Mode is our highest level of service. It applies to products that are being actively developed and maintained and are orderable through general distribution. Software fixes for all levels of problems can be expected. Maintenance Mode software is maintained and is still an important part of our product mix. -
File Transfer: Basics and Best Practices
File Transfer: Basics and Best Practices Joon Kim. Ph.D. PICSciE Research Computing Workshop @Chemistry 09/07/2018 Our goal today • Learn about data transfer basics • Pick the right tool for your job • Know what to expect • Overview of widely used tools • Learn about RC’s resources • Globus and Data Transfer Nodes • Q&A 2 Why do we care? Without good practice, you will waste time and effort 1. Start data transfer using SCP at 10pm. Usually takes 10 hours. 2. At 2am, there was a brief 1-minute network outage. Transfer job aborted. 3. Arrive 8am in the morning. See the damage. Start again, which will take 10 hours. Time 4. Lost a day of work. Effort 3 Why do we care? Without good practice, you will waste time and effort 1. Start data transfer using SCP at 10pm. Usually takes 10 hours. Is that really the best? Time Effort 4 We want you to Focus on your research, not on transferring data X X Time Effort 5 Use case 1 • I have data at Argonne National Lab that I want to process & analyze at Princeton HPC clusters Argonne’s Chemical Sciences and Engineering (CSE) division Princeton HPC Clusters 6 Use case 2 • I have data on my workstation/laptop that I want to process & analyze at Princeton HPC clusters workstation/laptop Princeton HPC Clusters 7 Data Transfer Basics 8 Data transfer: Overview Three key elements • Endpoints 1/10/100 Gbps • Network Source Destination SCP • Transfer tool FTP SFTP rsync rsync over ssh These will determine how you transfer data and how fast it will be 9 Why is my data transfer slow? Where are the bottlenecks? scp scp ftp ftp Source Destination 10 1. -
Lftp Certificate Verification Not Trusted
Lftp Certificate Verification Not Trusted Unversed Jed rupture navigably. If agential or alveated Mitchael usually spool his entirety wedging ravishingly or holings impavidly and unamusingly, how well-heeled is Constantin? Sometimes mock Yacov encircled her silks acquiescently, but self-repeating Tobit befriend unwieldily or debarks somnolently. The server is only providing the leaf certificate and not big chain. Lftp is a command-line file transfer program FTP client for UNIX and Unix-like systems. Lftp support ftps different from sftp ftps is ftp over the explicit TLS. Solution Nov 03 2020 Plesk does he manage FTPS mode settings implicit support explicit FTP. Vim lftprc set sslverify-certificate no step 2 lftp userwwwabccom Password userwwwabccom ls. 679902 ls Fatal error Certificate verification Not trusted. In lftp you edge the message Fatal error Certificate verification Not trusted It can consequence in adult directory see FILES section anon For implicit TLS SSL using lftp. Lftpftps GPJtag. Verification certificate not trusted WARNING Certificate verification unable to equip the first certificate. Sudden lftp problem poss authorisation related Networking. I do besides have a certificate specifically for this hostname so the verification fails. Lftp Kevin Bertoldi. LFTP as been compiled like real net-ftplftp-346 gnutls nls socks5 ssl Errors and issues. If your site will council allow keys you may be tedious to allow FTP from a fixed IP. From the compose page ftpssl-force boolean if for refuse and send password in point when server does water support SSL Default is air So their option isn't going. The web is ratio of suggestions to make this by disabling certificate verification or. -
OSS Alphabetical List and Software Identification
Annex: OSS Alphabetical list and Software identification Software Short description Page A2ps a2ps formats files for printing on a PostScript printer. 149 AbiWord Open source word processor. 122 AIDE Advanced Intrusion Detection Environment. Free replacement for Tripwire(tm). It does the same 53 things are Tripwire(tm) and more. Alliance Complete set of CAD tools for the specification, design and validation of digital VLSI circuits. 114 Amanda Backup utility. 134 Apache Free HTTP (Web) server which is used by over 50% of all web servers worldwide. 106 Balsa Balsa is the official GNOME mail client. 96 Bash The Bourne Again Shell. It's compatible with the Unix `sh' and offers many extensions found in 147 `csh' and `ksh'. Bayonne Multi-line voice telephony server. 58 Bind BIND "Berkeley Internet Name Daemon", and is the Internet de-facto standard program for 95 turning host names into IP addresses. Bison General-purpose parser generator. 77 BSD operating FreeBSD is an advanced BSD UNIX operating system. 144 systems C Library The GNU C library is used as the C library in the GNU system and most newer systems with the 68 Linux kernel. CAPA Computer Aided Personal Approach. Network system for learning, teaching, assessment and 131 administration. CVS A version control system keeps a history of the changes made to a set of files. 78 DDD DDD is a graphical front-end for GDB and other command-line debuggers. 79 Diald Diald is an intelligent link management tool originally named for its ability to control dial-on- 50 demand network connections. Dosemu DOSEMU stands for DOS Emulation, and is a linux application that enables the Linux OS to run 138 many DOS programs - including some Electric Sophisticated electrical CAD system that can handle many forms of circuit design. -
WIPO PCT Electronic Data Interchange (PCT-EDI) June 2020
WIPO PCT Electronic Data Interchange (PCT-EDI) PCT Technical Cooperation June 2020 WIPO PCT Electronic Data Interchange (PCT-EDI) June 2020 Table of Contents I. INTRODUCTION ........................................................................................................... 2 II. SERVICE OVERVIEW ................................................................................................... 2 A. Why SSH? .................................................................................................................. 2 B. The WIPO Server ....................................................................................................... 3 C. Client Software ........................................................................................................... 3 III. OFFICE ACCOUNTS ................................................................................................. 3 A. Introduction ................................................................................................................ 3 B. Office account and Directory structure ........................................................................ 3 C. Maintenance ............................................................................................................... 4 D. Examples in this document ......................................................................................... 4 IV. CLIENT SOFTWARE CONFIGURATION ................................................................... 5 A. Introduction ............................................................................................................... -
Linux Fundamentals (L-120)
Linux Fundamentals (L-120) Modality: Virtual Classroom Duration: 5 Days About this course: The Linux Fundamentals course by QuickStart provides foundational knowledge about the workflow, concepts, and tools used in Linux and Unix. The importance of Linux cannot be overstated when it comes to network architecture and professional development, which is why this course is essential for individuals who want a better grasp over Linux, an operating system most people do not have experience in. The course will help beginners get comfortable with Unix systems and learn critical workflows about managing directories and files, using the vi editor, complying with the excellent security mechanisms built into Linux, and understand how data is processed and flows across Linux pipelines. The course also covers shell programs, how they are designed, how they are written, and how system engineers can increase efficiency by running concurrent processes. The average annual income of a Linux Systems Engineer is $102,367. Course Objectives: Completing the Linux Fundamentals course will give students knowledge in: Linus file manipulation Useful filesystem features I/O pipes and redirection Regular expressions and text manipulations Managing processes and jobs Vi, the Unix editor Task automation through shell scrips Software application management Remote administration Audience: This course is aimed at students and professionals who want to build a solid foundation in Linux and Unix, as well as professionals who want to hone their skills. The information taught in this course is applicable to Fedore Core, SUDE Linux Professional, Red Had Enterprise Linux, and SUSE Linus Enterprise Server. Prerequisites: This is a basic level course which only requires proficiency in using computers. -
FTP and Beyond NASA
LINUX USER GFTP File Transfer with the Versatile GFTP FTP and Beyond NASA Whether you like your file transfers with a GUI or from a command prompt, GFTP has the right tool for every job.The GFTP client also supports advanced features such as secure file transfer with SSH. BY MARTIN STEIGERWALD FTP is a versatile and efficient installed automatically. See the box area shows the current action for a pro- File Transfer Protocol (FTP) labeled “Installing GFTP” for more on tocol. Gclient for Linux systems. GFTP, installing GFTP with Suse or Debian, as Enter the name of the FTP server to which was written by Brian Masney, per- well as details for building GFTP from which you wish to connect in the box forms all the standard chores associated source code. labeled Host at the top of the main win- with downloading and uploading files to dow. You can also enter an FTP FTP servers, and it also offers additional Working with GFTP username and password, and you can services, such as HTTP file transfer, SSH- GFTP launches a classical FTP-style split specify the port number to use for the based file transfer, and simultaneous window, with panels showing the local connection. The split window displays download from multiple servers. The and remote directories (see Figure 1). A the local directory structure on the left GFTP program provides several useful status area below provides information and the remote directories on the right. features that add efficiency to your FTP on the current transfers, and another When you find the file you wish to trans- sessions, such as drag and drop, intelli- gent prompting for existing files, direct Installing GFTP input for FTP commands, and direct If you have Suse Linux,you can run YaST | also means that the menu items created by transfer between two FTP servers. -
Migration from Windows to Linux for a Small Engineering Firm "A&G Associates"
Rochester Institute of Technology RIT Scholar Works Theses 2004 Migration from Windows to Linux for a small engineering firm "A&G Associates" Trimbak Vohra Follow this and additional works at: https://scholarworks.rit.edu/theses Recommended Citation Vohra, Trimbak, "Migration from Windows to Linux for a small engineering firm A&G" Associates"" (2004). Thesis. Rochester Institute of Technology. Accessed from This Thesis is brought to you for free and open access by RIT Scholar Works. It has been accepted for inclusion in Theses by an authorized administrator of RIT Scholar Works. For more information, please contact [email protected]. Migration from Windows to Linux for a Small Engineering Firm "A&G Associates" (H ' _T ^^L. WBBmBmBBBBmb- Windows Linux by Trimbak Vohra Thesis submitted in partial fulfillment of the requirements for the degree of Master of Science in Information Technology Rochester Institute of Technology B. Thomas Golisano College of Computing and Information Sciences Date: December 2, 2004 12/B2/28B2 14:46 5854752181 RIT INFORMATION TECH PAGE 02 Rochester Institute of Teehnology B. Thomas Golisano College of Computing and Information Sciences Master of Science in Information Technology Thesis Approval Form Student Name: Trimbak Vohra Thesis Title: Migration from Windows to Unux for a Small Engineeriog Firm "A&G Associates" Thesis Committee Name Signature Date Luther Troell luther IrQell, Ph.D ttL ",j7/Uy Chair G. L. Barido Prof. ~~orge Barido ? - Dec:. -cl7' Committee Member Thomas Oxford Mr. Thomas OxfocQ \ 2. L~( Q~ Committee Member Thesis Reproduction Permission Form Rochester Institute of Technology B. Thomas Golisano College of Computing and Information Sciences Master of Science in Information Technology Migration from Windows to Linux for a Small Engineering Firm "A&G Associates" I,Trimbak Vohra, hereby grant permission to the Wallace Library of the Rochester Institute of Technology to reproduce my thesis in whole or in part. -
Data Transfer Basics and Best Practices
Data Transfer Basics and Best Practices Joon Kim, Ph.D. PICSciE, Research Computing Research Computing Bootcamp 2018 10/29/2018 – 11/01/2018 Why do we care? Without good practice, you will waste time and effort 1. Start data transfer using SCP at 10pm. Usually takes 10 hours. 2. At 2am, there was a brief 1-minute network outage. Transfer job aborted. 3. Arrive 8am in the morning. See the damage. Start again, which will take 10 hours. Time 4. Lost a day of work. Effort 2 Why do we care? Without good practice, you will waste time and effort 1. Start data transfer using SCP at 10pm. Usually takes 10 hours. Is that really the best? Time Effort 3 We want you to Focus on your research, not on transferring data X X Time Effort 4 Use case 1 • I have data at Argonne National LaB that I want to process & analyze at Princeton HPC clusters Argonne National Lab Princeton RC HPC Clusters 5 Use case 2 • I have data on my workstation/laptop that I want to process & analyze at Princeton HPC clusters workstation/laptop Princeton RC HPC Clusters 6 Data Transfer Basics 7 Data transfer: Overview Three key elements • Endpoints 1/10/100 Gbps • Network Source Destination SCP • Transfer tool FTP SFTP rsync rsync over ssh These will determine how you transfer data and how fast it will be 8 Why is my data transfer slow? Where are the bottlenecks? scp scp ftp ftp Source Destination e.g., Server machine with 10 Gb/s connection will not guarantee 10 Gb/s transfer speed 9 Endpoint Examples SMB file mount NFS file mount Z: drive \\plabs.princeton.edu\data\ 10 1. -
Linux Command Line Basics II: Downloading Data and Controlling Files Yanbin Yin
Linux command line basics II: downloading data and controlling files Yanbin Yin 1 Things you should know about programming Learning programming has to go through the hands-on practice, a lot of practice Hearing what I describe about a command or a program helps, but you will not be able to do it unless you type in the codes and run it to see what happens Reading others’ codes helps but often is harder than writing it by yourself from scratch Although painful and frustrating, trouble-shooting is normal and part of the learning experience (ask experienced people or google) To avoid errors, you have to follow rules; most errors occurred in programming are because of not knowing rules or forgetting rules Use comments in case you forget what you’ve written means write-> run -> errors -> edit-> errors -> ………………………………….. -> run -> success Good news: finished scripts could be reused or edited for later use 2 Homework #7 1. Create a folder under your home called hw7 2. Change directory to hw7 3. Go to NCBI ftp site, find the genome, bacteria, ecoli MG1655 folder, and download the ptt file and the faa file in there 4. Create a copy of the ppt file, if the original file is called A.ptt, name the copied file A.ptt.bak Do the same thing for the faa file 5. Go to https://edu.isb-sib.ch/pluginfile.php/2878/mod_resource/content/4/couselab- html/content.html and finish all quizzes in Chapters 3 to 5. 6. Use what you learned in chapter 5 to count how many protein sequences are in the faa file of step 4. -
Remote File Transfer Protocol by Using Multithreding
BIOINFO Computer Engineering ISSN: 2249-3980 & E-ISSN: 2249-3999, Volume 2, Issue 1, 2012, pp.-31-35. Available online at http://www.bioinfo.in/contents.php?id=322 REMOTE FILE TRANSFER PROTOCOL BY USING MULTITHREDING GAMPAWAR A.D., BHAKTI JAIN, GABANE P. AND NARSWANI A.B. Department of Computer Science & Engineering, J.D.I.E.T., Yavatmal, India *Corresponding Author: Email- [email protected] Received: February 21, 2012; Accepted: March 15, 2012 Abstract- First module (FTP) of our framework would provide a user friendly FTP client application which would help even novice user to retrieve the file from remote destination server. Here users fall into two categories: A: Anonymous Users and B: Server Account Holder. In the first category the user can be anyone with no right to update, delete or upload the files on the server thus having limited capabilities. In case of the user having the account he/she has the privilege of writing, reading, update, delete or upload file on to the server. Following implementations would be involved in complete project – Creating a FTP Client Application with all functionalities and capabilities for executing various FTP commands and related functions. Config- uring DNS Server. This application provides a portal to the user through which the user has to specify the keywords along with the frequen- cy. The FTP Client will allow user to download, upload, update, delete and execute various FTP Commands. Keywords- FTP client, FTP server, DNS, TCP/IP Citation: Gampawar A.D., et al. (2012) Remote File Transfer Protocol by using Multithreding. BIOINFO Computer Engineering, ISSN: 2249- 3980 & E-ISSN: 2249-3999, Volume 2, Issue 1, pp.-31-35.