Deletion of Densin-180 Results in Abnormal Behaviors Associated with Mental Illness and Reduces Mglur5 and DISC1 in the Postsynaptic Density Fraction
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A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
DISC1 a Key Molecular Lead in Psychiatry and Neurodevelopment: No-More Disrupted-In-Schizophrenia 1
Molecular Psychiatry (2016) 21, 1488–1489 © 2016 Macmillan Publishers Limited, part of Springer Nature. All rights reserved 1359-4184/16 www.nature.com/mp NEWS AND COMMENTARY DISC1 a key molecular lead in psychiatry and neurodevelopment: No-More Disrupted-in-Schizophrenia 1 M Niwa1, T Cash-Padgett1,4, K-I Kubo2,4, A Saito1,4, K Ishii1,4, A Sumitomo3, Y Taniguchi1, K Ishizuka1, H Jaaro-Peled1, T Tomoda3, K Nakajima2, A Sawa1 and A Kamiya1 Molecular Psychiatry (2016) 21, 1488–1489; doi:10.1038/ second, although DISC1 is a multifunctional intracellular hub mp.2016.154; published online 6 September 2016 protein, we still do not know which specific function of DISC1 underlies each endophenotype or phenotype in mental conditions. Since the middle of the past century, we have serendipitously To address the first question on genetic validity, Sullivan7 come across treatment regimens that can partially ameliorate pointed out that DISC1 is unlikely to be an important ‘genetic’ psychosis and depression. Nonetheless, the mechanisms under- factor for schizophrenia defined by the Diagnostic and Statistical lying such severe mental conditions still remain elusive. Such lack Manual of Mental Disorders (DSM). This discussion is fairly valid, of mechanistic insight into major mental illnesses has hampered and we agree with this statement and conclude as ‘No-More the establishment of precise diagnostic framework, precluding Disrupted-in-Schizophrenia 1.’ Regarding the second question, Tsuboi further discovery of fundamental treatments for these disorders. et al.8 have recently encouraged the field to reinforce the evidence Meanwhile, understanding of the brain at the molecular level that supports the role for DISC1 in early development. -
Circular RNA Hsa Circ 0005114‑Mir‑142‑3P/Mir‑590‑5P‑ Adenomatous
ONCOLOGY LETTERS 21: 58, 2021 Circular RNA hsa_circ_0005114‑miR‑142‑3p/miR‑590‑5p‑ adenomatous polyposis coli protein axis as a potential target for treatment of glioma BO WEI1*, LE WANG2* and JINGWEI ZHAO1 1Department of Neurosurgery, China‑Japan Union Hospital of Jilin University, Changchun, Jilin 130033; 2Department of Ophthalmology, The First Hospital of Jilin University, Jilin University, Changchun, Jilin 130021, P.R. China Received September 12, 2019; Accepted October 22, 2020 DOI: 10.3892/ol.2020.12320 Abstract. Glioma is the most common type of brain tumor APC expression with a good overall survival rate. UALCAN and is associated with a high mortality rate. Despite recent analysis using TCGA data of glioblastoma multiforme and the advances in treatment options, the overall prognosis in patients GSE25632 and GSE103229 microarray datasets showed that with glioma remains poor. Studies have suggested that circular hsa‑miR‑142‑3p/hsa‑miR‑590‑5p was upregulated and APC (circ)RNAs serve important roles in the development and was downregulated. Thus, hsa‑miR‑142‑3p/hsa‑miR‑590‑5p‑ progression of glioma and may have potential as therapeutic APC‑related circ/ceRNA axes may be important in glioma, targets. However, the expression profiles of circRNAs and their and hsa_circ_0005114 interacted with both of these miRNAs. functions in glioma have rarely been studied. The present study Functional analysis showed that hsa_circ_0005114 was aimed to screen differentially expressed circRNAs (DECs) involved in insulin secretion, while APC was associated with between glioma and normal brain tissues using sequencing the Wnt signaling pathway. In conclusion, hsa_circ_0005114‑ data collected from the Gene Expression Omnibus database miR‑142‑3p/miR‑590‑5p‑APC ceRNA axes may be potential (GSE86202 and GSE92322 datasets) and explain their mecha‑ targets for the treatment of glioma. -
Genome-Wide DNA Methylation Analysis of KRAS Mutant Cell Lines Ben Yi Tew1,5, Joel K
www.nature.com/scientificreports OPEN Genome-wide DNA methylation analysis of KRAS mutant cell lines Ben Yi Tew1,5, Joel K. Durand2,5, Kirsten L. Bryant2, Tikvah K. Hayes2, Sen Peng3, Nhan L. Tran4, Gerald C. Gooden1, David N. Buckley1, Channing J. Der2, Albert S. Baldwin2 ✉ & Bodour Salhia1 ✉ Oncogenic RAS mutations are associated with DNA methylation changes that alter gene expression to drive cancer. Recent studies suggest that DNA methylation changes may be stochastic in nature, while other groups propose distinct signaling pathways responsible for aberrant methylation. Better understanding of DNA methylation events associated with oncogenic KRAS expression could enhance therapeutic approaches. Here we analyzed the basal CpG methylation of 11 KRAS-mutant and dependent pancreatic cancer cell lines and observed strikingly similar methylation patterns. KRAS knockdown resulted in unique methylation changes with limited overlap between each cell line. In KRAS-mutant Pa16C pancreatic cancer cells, while KRAS knockdown resulted in over 8,000 diferentially methylated (DM) CpGs, treatment with the ERK1/2-selective inhibitor SCH772984 showed less than 40 DM CpGs, suggesting that ERK is not a broadly active driver of KRAS-associated DNA methylation. KRAS G12V overexpression in an isogenic lung model reveals >50,600 DM CpGs compared to non-transformed controls. In lung and pancreatic cells, gene ontology analyses of DM promoters show an enrichment for genes involved in diferentiation and development. Taken all together, KRAS-mediated DNA methylation are stochastic and independent of canonical downstream efector signaling. These epigenetically altered genes associated with KRAS expression could represent potential therapeutic targets in KRAS-driven cancer. Activating KRAS mutations can be found in nearly 25 percent of all cancers1. -
The TRAX, DISC1, and GSK3 Complex in Mental Disorders and Therapeutic Interventions Yu-Ting Weng1,2, Ting Chien1, I-I Kuan1 and Yijuang Chern1,2*
Weng et al. Journal of Biomedical Science (2018) 25:71 https://doi.org/10.1186/s12929-018-0473-x REVIEW Open Access The TRAX, DISC1, and GSK3 complex in mental disorders and therapeutic interventions Yu-Ting Weng1,2, Ting Chien1, I-I Kuan1 and Yijuang Chern1,2* Abstract Psychiatric disorders (such as bipolar disorder, depression, and schizophrenia) affect the lives of millions of individuals worldwide. Despite the tremendous efforts devoted to various types of psychiatric studies and rapidly accumulating genetic information, the molecular mechanisms underlying psychiatric disorder development remain elusive. Among the genes that have been implicated in schizophrenia and other mental disorders, disrupted in schizophrenia 1 (DISC1) and glycogen synthase kinase 3 (GSK3) have been intensively investigated. DISC1 binds directly to GSK3 and modulates many cellular functions by negatively inhibiting GSK3 activity. The human DISC1 gene is located on chromosome 1 and is highly associated with schizophrenia and other mental disorders. A recent study demonstrated that a neighboring gene of DISC1, translin-associated factor X (TRAX), binds to the DISC1/GSK3β complex and at least partly mediates the actions of the DISC1/GSK3β complex. Previous studies also demonstrate that TRAX and most of its interacting proteins that have been identified so far are risk genes and/or markers of mental disorders. In the present review, we will focus on the emerging roles of TRAX and its interacting proteins (including DISC1 and GSK3β) in psychiatric disorders and the potential implications for developing therapeutic interventions. Keywords: TRAX, DISC1, GSK3β, Mental disorders, DNA damage, DNA repair, Oxidative stress, A2AR, PKA Background DNA repair) by interacting with various proteins [4–12]. -
Supplementary Materials
Supplementary materials Supplementary Table S1: MGNC compound library Ingredien Molecule Caco- Mol ID MW AlogP OB (%) BBB DL FASA- HL t Name Name 2 shengdi MOL012254 campesterol 400.8 7.63 37.58 1.34 0.98 0.7 0.21 20.2 shengdi MOL000519 coniferin 314.4 3.16 31.11 0.42 -0.2 0.3 0.27 74.6 beta- shengdi MOL000359 414.8 8.08 36.91 1.32 0.99 0.8 0.23 20.2 sitosterol pachymic shengdi MOL000289 528.9 6.54 33.63 0.1 -0.6 0.8 0 9.27 acid Poricoic acid shengdi MOL000291 484.7 5.64 30.52 -0.08 -0.9 0.8 0 8.67 B Chrysanthem shengdi MOL004492 585 8.24 38.72 0.51 -1 0.6 0.3 17.5 axanthin 20- shengdi MOL011455 Hexadecano 418.6 1.91 32.7 -0.24 -0.4 0.7 0.29 104 ylingenol huanglian MOL001454 berberine 336.4 3.45 36.86 1.24 0.57 0.8 0.19 6.57 huanglian MOL013352 Obacunone 454.6 2.68 43.29 0.01 -0.4 0.8 0.31 -13 huanglian MOL002894 berberrubine 322.4 3.2 35.74 1.07 0.17 0.7 0.24 6.46 huanglian MOL002897 epiberberine 336.4 3.45 43.09 1.17 0.4 0.8 0.19 6.1 huanglian MOL002903 (R)-Canadine 339.4 3.4 55.37 1.04 0.57 0.8 0.2 6.41 huanglian MOL002904 Berlambine 351.4 2.49 36.68 0.97 0.17 0.8 0.28 7.33 Corchorosid huanglian MOL002907 404.6 1.34 105 -0.91 -1.3 0.8 0.29 6.68 e A_qt Magnogrand huanglian MOL000622 266.4 1.18 63.71 0.02 -0.2 0.2 0.3 3.17 iolide huanglian MOL000762 Palmidin A 510.5 4.52 35.36 -0.38 -1.5 0.7 0.39 33.2 huanglian MOL000785 palmatine 352.4 3.65 64.6 1.33 0.37 0.7 0.13 2.25 huanglian MOL000098 quercetin 302.3 1.5 46.43 0.05 -0.8 0.3 0.38 14.4 huanglian MOL001458 coptisine 320.3 3.25 30.67 1.21 0.32 0.9 0.26 9.33 huanglian MOL002668 Worenine -
DISC1-Binding Proteins in Neural Development, Signalling and Schizophrenia
Edinburgh Research Explorer DISC1-binding proteins in neural development, signalling and schizophrenia Citation for published version: Bradshaw, NJ & Porteous, DJ 2012, 'DISC1-binding proteins in neural development, signalling and schizophrenia', Neuropharmacology, vol. 62, no. 3, pp. 1230-41. https://doi.org/10.1016/j.neuropharm.2010.12.027 Digital Object Identifier (DOI): 10.1016/j.neuropharm.2010.12.027 Link: Link to publication record in Edinburgh Research Explorer Document Version: Publisher's PDF, also known as Version of record Published In: Neuropharmacology Publisher Rights Statement: Available under Open Access General rights Copyright for the publications made accessible via the Edinburgh Research Explorer is retained by the author(s) and / or other copyright owners and it is a condition of accessing these publications that users recognise and abide by the legal requirements associated with these rights. Take down policy The University of Edinburgh has made every reasonable effort to ensure that Edinburgh Research Explorer content complies with UK legislation. If you believe that the public display of this file breaches copyright please contact [email protected] providing details, and we will remove access to the work immediately and investigate your claim. Download date: 25. Sep. 2021 Neuropharmacology 62 (2012) 1230e1241 Contents lists available at ScienceDirect Neuropharmacology journal homepage: www.elsevier.com/locate/neuropharm DISC1-binding proteins in neural development, signalling and schizophrenia Nicholas J. Bradshaw*, David J. Porteous Medical Genetics Section, Molecular Medicine Centre, Institute of Genetics & Molecular Medicine, University of Edinburgh, Western General Hospital, Crewe Road South, Edinburgh, Midlothian EH4 2XU, UK article info abstract Article history: In the decade since Disrupted in Schizophrenia 1 (DISC1)wasfirst identified it has become one of the most Received 29 October 2010 convincing risk genes for major mental illness. -
Changes in Synaptic Protein Content and Signaling in a Mouse Model of Fragile X Syndrome Kelly Birch University of San Diego
University of San Diego Digital USD Undergraduate Honors Theses Theses and Dissertations Summer 5-22-2016 Changes in Synaptic Protein Content and Signaling in a Mouse Model of Fragile X Syndrome Kelly Birch University of San Diego Peter W. Vanderklish PhD The Scripps Research Institute Follow this and additional works at: https://digital.sandiego.edu/honors_theses Part of the Genetics Commons, and the Molecular and Cellular Neuroscience Commons Digital USD Citation Birch, Kelly and Vanderklish, Peter W. PhD, "Changes in Synaptic Protein Content and Signaling in a Mouse Model of Fragile X Syndrome" (2016). Undergraduate Honors Theses. 20. https://digital.sandiego.edu/honors_theses/20 This Undergraduate Honors Thesis is brought to you for free and open access by the Theses and Dissertations at Digital USD. It has been accepted for inclusion in Undergraduate Honors Theses by an authorized administrator of Digital USD. For more information, please contact [email protected]. Running head: CHANGES IN SYNAPTIC PROTEIN CONTENT 1 Changes in synaptic protein content and signaling in a mouse model of Fragile X Syndrome ______________________ A Thesis Presented to The Faculty and the Honors Program Of the University of San Diego ______________________ By Kelly A. Birch Department of Psychological Sciences 2016 CHANGES IN SYNAPTIC PROTEIN CONTENT 2 Changes in synaptic protein content and signaling in a mouse model of Fragile X Syndrome Fragile X Syndrome (FXS) is the most common inherited cause of intellectual disability (ID) in males and a significant cause of ID in females. In addition to ID, affected children may also exhibit hyperactivity, extreme anxiety in multiple forms, poor social communication (including poor eye contact and poor pragmatics), and other autism spectrum behaviors such as restricted interests and repetitive patterns of behavior. -
Structural and Functional Analysis of Translocation in DISC1 Gene and Impact on Schizophrenia
CAPITAL UNIVERSITY OF SCIENCE AND TECHNOLOGY, ISLAMABAD Structural and Functional Analysis of Translocation in DISC1 gene and Impact on Schizophrenia by Jaweria Zia A thesis submitted in partial fulfillment for the degree of Master of Science in the Faculty of Health and Life Sciences Department of Bioinformatics and Biosciences 2021 i Copyright © 2021 by Jaweria Zia All rights reserved. No part of this thesis may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, by any information storage and retrieval system without the prior written permission of the author. ii I dedicate this thesis to my parents and my teachers. CERTIFICATE OF APPROVAL Structural and Functional Analysis of Translocation in DISC1 gene and Impact on Schizophrenia by Jaweria Zia (MBS191024) THESIS EXAMINING COMMITTEE S. No. Examiner Name Organization (a) External Examiner Dr. Mazhar Qayyam PMAS-UAAR, Rawalpindi (b) Internal Examiner Dr. Erum Dilshad CUST, Islamabad (c) Supervisor Dr. Syeda Marriam Bakhtiar CUST, Islamabad Dr. Syeda Marriam Bakhtiar Thesis Supervisor April, 2021 Dr. Sahar Fazal Dr. Muhammad Abdul Qadir Head Dean Dept. of Biosciences & Bioinformatics Faculty of Health & Life Sciences April, 2021 April, 2021 iv Author's Declaration I, Jaweria Zia hereby state that my MS thesis titled \Structural and Func- tional Analysis of Translocation in DISC1 gene and Impact on Schizophre- nia" is my own work and has not been submitted previously by me for taking any degree from Capital University of Science and Technology, Islamabad or anywhere else in the country/abroad. At any time if my statement is found to be incorrect even after my graduation, the University has the right to withdraw my MS Degree. -
Abnormalities Induced by a Disc1 Mutation Modelling a Translocation Linked to Major Mental Illness Elise L
Malavasi et al. Translational Psychiatry (2018) 8:184 DOI 10.1038/s41398-018-0228-1 Translational Psychiatry ARTICLE Open Access DISC1 regulates N-methyl-D-aspartate receptor dynamics: abnormalities induced by a Disc1 mutation modelling a translocation linked to major mental illness Elise L. V. Malavasi1,KyriakosD.Economides2, Ellen Grünewald1, Paraskevi Makedonopoulou1, Philippe Gautier3, Shaun Mackie1, Laura C. Murphy1,HannahMurdoch4,DarraghCrummie1, Fumiaki Ogawa1,DanielL.McCartney1, Shane T. O’Sullivan1,KarenBurr5, Helen S. Torrance1, Jonathan Phillips1, Marion Bonneau1,SusanM.Anderson1, Paul Perry3, Matthew Pearson3, Costas Constantinides1, Hazel Davidson-Smith1, Mostafa Kabiri6, Barbara Duff7, Mandy Johnstone 1,7,H.GregPolites8,StephenM.Lawrie 7, Douglas H. Blackwood 7, Colin A. Semple3, Kathryn L. Evans1, Michel Didier9, Siddharthan Chandran5,AndrewM.McIntosh 7, David J. Price10,MilesD.Houslay11, David J. Porteous 1 and J. Kirsty Millar1 Abstract The neuromodulatory gene DISC1 is disrupted by a t(1;11) translocation that is highly penetrant for schizophrenia and affective disorders, but how this translocation affects DISC1 function is incompletely understood. N-methyl-D-aspartate receptors (NMDAR) play a central role in synaptic plasticity and cognition, and are implicated in the pathophysiology 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; of schizophrenia through genetic and functional studies. We show that the NMDAR subunit GluN2B complexes with DISC1-associated trafficking factor TRAK1, while DISC1 interacts with the GluN1 subunit and regulates dendritic NMDAR motility in cultured mouse neurons. Moreover, in the first mutant mouse that models DISC1 disruption by the translocation, the pool of NMDAR transport vesicles and surface/synaptic NMDAR expression are increased. Since NMDAR cell surface/synaptic expression is tightly regulated to ensure correct function, these changes in the mutant mouse are likely to affect NMDAR signalling and synaptic plasticity. -
DISC1 As a Genetic Risk Factor for Schizophrenia and Related Major Mental Illness: Response to Sullivan
Molecular Psychiatry (2014) 19, 141–143 © 2014 Macmillan Publishers Limited All rights reserved 1359-4184/14 www.nature.com/mp GUEST EDITORIAL DISC1 as a genetic risk factor for schizophrenia and related major mental illness: response to Sullivan Molecular Psychiatry (2014) 19, 141–143; doi:10.1038/mp.2013.160 t(1;11); the t(1;11) shows unequivocal linkage to the high burden of major mental illness in this family, and the t(1;11) has been scored both by classical chromosome banding and by fluores- cence in situ hybridisation16. The molecular cloning of the t(1;11) breakpoint4 with sequence confirmation has more recently In a recent guest editorial,1 Patrick Sullivan questioned several allowed us to develop a PCR-based assay spanning the break- aspects of the original Scottish t(1;11) family in which the DISC1 point; we routinely apply this test to validate samples in gene was discovered.2–4 He challenged the wider significance of contemporary studies (Thomson, unpublished). Finally, regarding the original genetic finding and questioned the relevance of DISC1 the Scottish t(1;11) pedigree, a major third wave of follow-up has biology to psychiatry, casting doubt on the validity of the recently been completed with brain imaging added to the clinical ‘integrative’ approach. Sullivan prefaced his strong views on phenotype: this will be submitted shortly for publication. DISC1 by welcoming the ‘uncompromising statistical rigour and Sullivan finds the spectrum of psychiatric diagnoses seen in the replication’ that is now being applied to his area of expertise in t(1;11) family ‘worrying’, but what the t(1;11) family showed par genome-wide association studies (GWAS). -
PAK7) Is a Risk Factor for Psychosis
Provided by the author(s) and NUI Galway in accordance with publisher policies. Please cite the published version when available. Title An inherited duplication at the gene p21 Protein-Activated Kinase 7 (PAK7) is a risk factor for psychosis Author(s) Morris, Derek W. Publication Date 2014-01-28 Morris, D. W.,Pearson, R. D.,Cormican, P.,Kenny, E. M.,O'Dushlaine, C. T.,Perreault, L. P.,Giannoulatou, E.,Tropea, D.,Maher, B. S.,Wormley, B.,Kelleher, E.,Fahey, C.,Molinos, I.,Bellini, S.,Pirinen, M.,Strange, A.,Freeman, C.,Thiselton, D. L.,Elves, R. L.,Regan, R.,Ennis, S.,Dinan, T. G.,McDonald, C.,Murphy, K. C.,O'Callaghan, E.,Waddington, J. L.,Walsh, Publication D.,O'Donovan, M.,Grozeva, D.,Craddock, N.,Stone, Information J.,Scolnick, E.,Purcell, S.,Sklar, P.,Coe, B.,Eichler, E. E.,Ophoff, R.,Buizer, J.,Szatkiewicz, J.,Hultman, C.,Sullivan, P.,Gurling, H.,McQuillin, A.,St Clair, D.,Rees, E.,Kirov, G.,Walters, J.,Blackwood, D.,Johnstone, M.,Donohoe, G.,O'Neill, F. A.,Kendler, K. S.,Gill, M.,Riley, B. P.,Spencer, C. C.,Corvin, A. (2014) 'An inherited duplication at the gene p21 Protein-Activated Kinase 7 (PAK7) is a risk factor for psychosis'. Hum Mol Genet, 23 (1212):3316-26. Publisher Oxford University Press (OUP) Link to publisher's https://doi.org/10.1093/hmg/ddu025 version Item record http://hdl.handle.net/10379/16270 DOI http://dx.doi.org/10.1093/hmg/ddu025 Downloaded 2021-09-24T13:08:42Z Some rights reserved. For more information, please see the item record link above.