Journal of Biological Rhythms Official Publication of the Society for Research on Biological Rhythms

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Journal of Biological Rhythms Official Publication of the Society for Research on Biological Rhythms Journal of Biological Rhythms Official Publication of the Society for Research on Biological Rhythms Volume 16, Issue 6 December 2001 EDITORIAL Pebbles of Truth 515 Martin Zatz FEATURE Review Clockless Yeast and the Gears of the Clock: How Do They Mesh? 516 Ruben Baler ARTICLES Resetting of the Circadian Clock by Phytochromes 523 and Cryptochromes in Arabidopsis Marcelo J. Yanovsky, M. Agustina Mazzella, Garry C. Whitelam, and Jorge J. Casal Distinct Pharmacological Mechanisms Leading to c-fos 531 Gene Expression in the Fetal Suprachiasmatic Nucleus Lauren P. Shearman and David R. Weaver Daily Novel Wheel Running Reorganizes and 541 Splits Hamster Circadian Activity Rhythms Michael R. Gorman and Theresa M. Lee Temporal Reorganization of the Suprachiasmatic Nuclei 552 in Hamsters with Split Circadian Rhythms Michael R. Gorman, Steven M. Yellon, and Theresa M. Lee Light-Induced Resetting of the Circadian Pacemaker: 564 Quantitative Analysis of Transient versus Steady-State Phase Shifts Kazuto Watanabe, Tom Deboer, and Johanna H. Meijer Temperature Cycles Induce a Bimodal Activity Pattern in Ruin Lizards: 574 Masking or Clock-Controlled Event? A Seasonal Problem Augusto Foà and Cristiano Bertolucci LETTER Persistence of Masking Responses to Light in Mice Lacking Rods and Cones 585 N. Mrosovsky, Robert J. Lucas, and Russell G. Foster MEETING Eighth Meeting of the Society for Research on Biological Rythms 588 Index 589 Journal of Biological Rhythms Official Publication of the Society for Research on Biological Rhythms EDITOR-IN-CHIEF Martin Zatz FEATURES EDITORS ASSOCIATE EDITORS Larry Morin Michael Hastings SUNY, Stony Brook University of Cambridge Anna Wirz-Justice Ken-Ichi Honma University of Basel Hokkaido Univ School Medicine Michael Young Rockefeller University EDITORIAL BOARD Josephine Arendt Terry Page University of Surrey Vanderbilt University Charles A. Czeisler Ueli Schibler Harvard Medical School University of Geneva Serge Daan William J. Schwartz University of Groningen U Mass Medical School ADVISORY BOARD Deborah Bell-Pedersen Jennifer J. Loros Texas A&M University Dartmouth Medical School Gene D. Block Robert Y. Moore University of Virginia University of Pittsburgh Vincent M. Cassone Steven M. Reppert Texas A&M University Harvard Medical School Jay C. Dunlap Till Roenneberg Dartmouth Medical School University of Munich Russell G. Foster Mark D. Rollag Imperial College of Science Uniformed Services University Albert Goldbeter Benjamin Rusak University of Brussels Dalhousie University Carla B. Green Rae Silver University of Virginia Columbia University Paul E. Hardin Kathleen King Siwicki University of Houston Swarthmore College William J. M. Hrushesky Fred W. Turek Albany VAMedical Center Northwestern University Helena Illnerova David R. Weaver Czech Academy of Sciences Harvard Medical School Carl Johnson Irving Zucker Vanderbilt University UC, Berkeley Steve Kay The Scripps Research Institute Journal of Biological Rhythms Official Publication of the Society for Research on Biological Rhythms The JOURNAL OF BIOLOGICAL RHYTHMS (JBR) publishes original, full-length reports in English of empirical inves- tigations into all aspects of biological rhythmicity.Of particular interest are submissions that focus on rhythms related to the major environmental cycles, including daily (circadian) rhythms, tidal rhythms, annual rhythms (including photo- periodism), and biological rhythms that interact with those rhythms influenced by the environment. Studies using ge- netic, biochemical, physiological, behavioral, and modeling approaches to understand the nature, mechanisms, and functions of biological rhythms in all species are welcome. A major objective of JBR is to serve as a vehicle for transmit- ting information about biological rhythms in plants and animals, as well as those studying human rhythms in both the clinical and real world setting. Preliminary or incomplete studies will not be considered. Research reported in the journal must meet the highest standards of experimental design and data analysis. Opinion papers and reviews of significant, timely issues will also be considered. JOURNAL OF BIOLOGICAL RHYTHMS (ISSN 0748-7304) is published bimonthly in February, April, June, August, October, and December by Sage Science Press, an imprint of Sage Publications, 2455 Teller Road, Thousand Oaks, CA 91320; telephone (800) 818-SAGE(7243) and (805) 499-9774; fax/order line (805) 375-1700; e-mail [email protected]; http://www.sagepub. com. Copyright © 2001 by Sage Publications. All rights reserved. No portion of the contents may be reproduced in any form without written permission of the publisher. Disclaimer: The authors, editors, and publisher will not accept any legal responsibility for any errors or omissions that may be made in this publication. The publisher makes no warranty, express or implied, with respect to the material con- tained herein. Subscriptions: Annual subscription rates for institutions and individuals are based on the current frequency.Prices quoted are in U.S. dollars and are subject to change without notice. Canadian subscribers add 7% GST (and HST as appropriate). Outside U.S. subscription rates include shipping via air-speeded delivery. Institutions: $550 (within the U.S.) / $574 (outside the U.S.) / single issue: $105 (worldwide). Individuals: $130 (within the U.S.) / $154 (out- side the U.S.) / single issue: $33 (worldwide). Orders by MasterCard or Visa can be placed by phone at (805) 499-9774; fax/order line (805) 375-1700. Payment must be made in U.S. dollars. Indexed in Academic Search, Agricola, Biological Abstracts, Biosciences Citation Index, BIOSIS Previews, Chemical Ab- ® stracts, Comprehensive MEDLINE with FullTEXT, Corporate ResourceNET, Current Citations Express, Current Contents : Life Sciences, Elsevier BIOBASE/Current Awareness in Biological Sciences, Ergonomics Abstracts, Health Source Plus, Index Medicus, INSPEC, International Aerospace Abstracts, ISI Basic Science Index, MasterFILE FullTEXT, MEDLINE, Neurosciences Abstracts, Periodical Abstracts, Psychological Abstracts, PsycINFO, PsycLIT, Science ® Citation Index , Science Citation Index Expanded, and TOPICsearch. Back issues: Information about availability and prices of back issues may be obtained from the publisher’s order depart- ment (address below). Single-issue orders for 5 or more copies will receive a special adoption discount. Contact the order department for details. Inquiries: Address all correspondence and permissions requests to Sage Publications, 2455 TellerRoad, Thousand Oaks, California 91320; e-mail [email protected]; http://www.sagepub.com. Authorization to photocopy material for internal or personal use under circumstances not falling within the fair use pro- visions of the Copyright Act is granted by Sage Publications to libraries and other users registered with the Copyright Clearance Center Transactional Reporting Service, provided that the fee of $.50 per copy plus $.10 per copy page is paid directly to the CCC, 21 Congress Street, Salem, MA 01970. The identification code for JOURNAL OF BIOLOGICAL RHYTHMS is 0748-7304/2001/$.50 +.10. Advertising: Current rates and specifications may be obtained by writing to the Advertising Manager at the Thousand Oaks office (address above). Claims: Claims for undelivered copies must be made no later than 6 months following month of publication. The pub- lisher will supply missing copies when losses have been sustained in transit and when the reserve stock will permit. Changes of address: Please inform the publisher at least 6 weeks prior to move. Enclose present mailing label with change of address. Effective with the 1986 volume, this journal is printed on acid-free paper. Cover photo: Plamen D. Penev, Northwestern University For Sage Science Press: Ben Sztajnkrycer, Production Editor Eric Law, Copy Editor Paul Doebler, Designer Katinka Baltazar, Designer PRINTED IN THE UNITED STATES OF AMERICA. COPYRIGHT © 2001 SAGE PUBLICATIONS ZatzJOURNAL / EDITORIAL OF BIOLOGICAL RHYTHMS / December 2001 EDITORIAL Pebbles of Truth Science has gotten such a good reputation for How true is it? Is it the whole truth? Is it entirely true or answering questions that just about everybody claims just partially true? Is it strictly true, necessarily true, the adjective “scientific” for what they say. An impec- generally true, often true, true under certain circum- cable scientific approach is, however, useless for most stances? Is it conditionally true, likely true, possibly of life’s important questions like “Wherein lies the true? We thereby bypass some of the deeper, more Good?” “Why me?” “Hold ‘em or fold ‘em?” “Shall intractable, issues of truth and causality and compen- we send troops?” Scientists are no better than any- sate with the benefits of open-mindedness, disinterest body else at making most personal and political deci- (not fooling ourselves), and small hard truths. sions and can be a real pain when it comes to provid- The ability to declare a question presently unan- ing clear answers to simple questions—especially if swerable, no matter how important, and to accept their defensive scientific cloaking device is turned on. interim and partial truths without commitment, is The way we scientists deal with questions and perhaps the greatest strength of science and a hall- answers often frustrates the people who consult us mark of its different worldview. We have had the priv- and support us. ilege, so far, of choosing our questions. Although There are two reasons for this. First,
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