Evolution of Olfaction in Lepidoptera and Trichoptera Gene Families and Antennal Morphology Yuvaraj, Jothi Kumar
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Milkweed Bug (Oncopeltus Fasciatus)
Milkweed Bug (Oncopeltus fasciatus) Genome Consortium [Logo by Chiaki Ueda] Supplementary Information Table of Contents 1. Genome and transcriptome sequencing and assembly ............................................ 4 1.1 Source materials, DNA and RNA purification ..................................................... 4 1.2 Library preparation ............................................................................................... 4 1.3 Sequencing ............................................................................................................ 5 2. Genome characteristics, quality control, expression analyses ................................ 6 2.1 Genome size .......................................................................................................... 6 2.1.a Flow cytometry estimation ..................................................................... 6 2.1.b k-mer estimation .................................................................................... 8 2.2 Lateral gene transfer events and bacterial contamination ................................... 13 2.3 Repeat content ..................................................................................................... 19 2.4 Comparative transcriptomic assessments of hemipteroid reproductive biology 23 3. Automated gene annotation using a Maker 2.0 pipeline tuned for arthropods ..... 26 4. Community curation and generating the official gene set .................................... 28 1 5. Curation and comparative analysis of specific gene families -
Use of Microhabitats Affects Butterfly Assemblages in a Rural Landscape
ARTICLE Use of microhabitats affects butterfly assemblages in a rural landscape Elton Orlandin¹³; Mônica Piovesan¹⁴; Fernanda Maurer D’Agostini²⁵ & Eduardo Carneiro¹⁶ ¹ Universidade Federal do Paraná (UFPR), Departamento de Zoologia (DZOO), Laboratório de Estudos de Lepidoptera Neotropical (LABLEPNEO). Curitiba, PR, Brasil. ² Universidade do Oeste de Santa Catarina (UNOESC), Departamento de Ciências Biológicas e da Saúde. Joaçaba, SC, Brasil. ³ ORCID: http://orcid.org/0000-0002-1987-9727. E-mail: [email protected] ⁴ ORCID: http://orcid.org/0000-0003-3367-9358. E-mail: [email protected] ⁵ ORCID: http://orcid.org/0000-0002-1115-6153. E-mail: [email protected] ⁶ ORCID: http://orcid.org/0000-0002-4796-0020. E-mail: [email protected] Abstract. Landscapes composed of small rural properties may support highly heterogeneous habitat, because they often cover distinct types of land uses adjacent to surrounding forest fragments. Many butterfly species may benefit from this kind of landscape, as very distinct microhabitats can be found in a very restricted spatial scale. To better understand how different microhabitats are related to fragmentation in rural landscapes the present study collected the butterfly fauna in 18 sampling point sites, representing distinct types of forest edges and forest interiors. Although closely located, these sites showed no spatial autocorrelation. Instead, a major distinction in species richness and composition was found among forest interior and edge habitats while no significant difference was found in species composition among distinct edge types. Therefore, the high segregation of butterfly assemblages found in a very restricted geographic scale suggests the presence of two different groups of butterflies that respond independently to forest fragmentation, the forest interior assemblages and forest edge assemblages. -
Considerations for Insect Learning in Integrated Pest Management
Journal of Insect Science, (2019) 19(4): 6; 1–14 doi: 10.1093/jisesa/iez064 Review Considerations for Insect Learning in Integrated Pest Management Catherine M. Little,1,2,3, Thomas W. Chapman,2 and N. Kirk Hillier1, 1Department of Biology, Acadia University, Wolfville, NS B4P2R6, Canada, 2Department of Biology, Memorial University of Newfoundland and Labrador, St. John’s, NL A1C5S7, Canada, and 3Corresponding author, e-mail: [email protected] Subject Editor: Phyllis Weintraub Received 22 March 2019; Editorial decision 31 May 2019 Abstract The past 100 yr have seen dramatic philosophical shifts in our approach to controlling or managing pest species. The introduction of integrated pest management in the 1970s resulted in the incorporation of biological and behavioral approaches to preserve ecosystems and reduce reliance on synthetic chemical pesticides. Increased understanding of the local ecosystem, including its structure and the biology of its species, can improve efficacy of integrated pest management strategies. Pest management strategies incorporating insect learning paradigms to control insect pests or to use insects to control other pests can mediate risk to nontarget insects, including pollinators. Although our understanding of insect learning is in its early stages, efforts to integrate insect learning into pest management strategies have been promising. Due to considerable differences in cognitive abilities among insect species, a case- by-case assessment is needed for each potential application of insect learning within a pest management strategy. Key words: conditioning, aversive, associative, learned behavior, memory Learning and memory are ubiquitous among animals, including in- environmental, physiological, or social cues (Papaj and Prokopy sects (Capaldi et al. -
Genome Consortium Supplementary Information
Milkweed Bug (Oncopeltus fasciatus) Genome Consortium [Logo by Chiaki Ueda] Supplementary Information Table of Contents 1. Genome and transcriptome sequencing and assembly ............................................ 4 1.1 Source materials, DNA and RNA purification ..................................................... 4 1.2 Library preparation ............................................................................................... 4 1.3 Sequencing ............................................................................................................ 5 2. Genome characteristics, quality control, expression analyses ................................ 6 2.1 Genome size .......................................................................................................... 6 2.1.a Flow cytometry estimation ..................................................................... 6 2.1.b k-mer estimation .................................................................................... 8 2.2 Lateral gene transfer events and bacterial contamination ................................... 13 2.3 Repeat content ..................................................................................................... 19 2.4 Comparative transcriptomic assessments of hemipteroid reproductive biology 23 3. Automated gene annotation using a Maker 2.0 pipeline tuned for arthropods ..... 26 4. Community curation and generating the official gene set .................................... 28 1 5. Curation and comparative analysis of specific gene families -
Linea En Sistematica Efrain
FACULTAD DE CIENCIAS PROGRAMA BIOLOGIA DOCTORADO EN BIOLOGIA- LINEA EN SISTEMATICA EFRAIN REINEL HENAO BAÑOL ANÁLISIS FILOGENÉTICO DEL GRUPO DALLA CYPSELUS EVANS (1955) (HESPERIIDAE: HETEROPTERINAE) CON BASE EN CARACTERES MORFOLÓGICOS Y MOLECULARES BOGOTA 25 DE NOVIEMBRE DE 2016 EFRAIN REINEL HENAO BAÑOL ANÁLISIS FILOGENÉTICO DEL GRUPO DALLA CYPSELUS EVANS (1955) (HESPERIIDAE: HETEROPTERINAE) CON BASE EN CARACTERES MORFOLÓGICOS Y MOLECULARES Tesis presentada al programa de Biología, Doctorado en Biología línea sistemática de la Universidad Nacional de Colombia como requisito parcial para la obtención del título de Doctor en Ciencias Biológicas Director: Dr. JOHN DOUGLAS LYNCH Bogotá-D.C 2016 EFRAIN REINEL HENAO BAÑOL ANÁLISIS FILOGENÉTICO DEL GRUPO DALLA CYPSELUS EVANS (1955) (HESPERIIDAE: HETEROPTERINAE) CON BASE EN CARACTERES MORFOLÓGICOS Y MOLECULARES Profesor. Dr. JONH DOUGLAS LYNCH ________________________________________________ Tesis aprobada como requisito parcial para obtar al grado de Doctor en Ciencias Biologicas- Sistemática. En el programa de Biologia de la Universidad Nacional de Colombia. Bogotá, 23 de noviembre de 2016 A mis hijos…Carlos Alejandro, Emmanuel y Samara. “Dado que en principio, una matriz de datos que contiene caracteres para diferentes minerales se puede analizar con un programa, para obtener un dendrograma, la aplicación de técnicas cladísticas por sí sola, no crea un análisis filogenético”. Wägele, 2004 “Dios en su infinita misericordia nos permite tomar desiciones, pero esas desiciones pueden ser adecuadas o no según los criterios humanos, sin embargo cada decisión tiene sus efectos, está en nuestras manos tomar las mejores desiciones para que las consecuencias sean en nuestro propio beneficio, caso contrario pagaremos por nuestros errores” A Dios gracias por permitirnos tomar nuestras propias desiciones aunque a veces no sean las mejores. -
Morphological and Transcriptomic Analysis of a Beetle Chemosensory
Dippel et al. BMC Biology (2016) 14:90 DOI 10.1186/s12915-016-0304-z RESEARCH ARTICLE Open Access Morphological and Transcriptomic Analysis of a Beetle Chemosensory System Reveals a Gnathal Olfactory Center Stefan Dippel1†, Martin Kollmann2†, Georg Oberhofer3, Alice Montino1, Carolin Knoll2, Milosz Krala2, Karl-Heinz Rexer4, Sergius Frank2, Robert Kumpf5, Joachim Schachtner2* and Ernst A. Wimmer1* Abstract Background: The red flour beetle Tribolium castaneum is an emerging insect model organism representing the largest insect order, Coleoptera, which encompasses several serious agricultural and forest pests. Despite the ecological and economic importance of beetles, most insect olfaction studies have so far focused on dipteran, lepidopteran, or hymenopteran systems. Results: Here, we present the first detailed morphological description of a coleopteran olfactory pathway in combination with genome-wide expression analysis of the relevant gene families involved in chemoreception. Our study revealed that besides the antennae, also the mouthparts are highly involved in olfaction and that their respective contribution is processed separately. In this beetle, olfactory sensory neurons from the mouthparts project to the lobus glomerulatus, a structure so far only characterized in hemimetabolous insects, as well as to a so far non-described unpaired glomerularly organized olfactory neuropil in the gnathal ganglion, which we term the gnathal olfactory center. The high number of functional odorant receptor genes expressed in the mouthparts also supports the importance of the maxillary and labial palps in olfaction of this beetle. Moreover, gustatory perception seems equally distributed between antenna and mouthparts, since the number of expressed gustatory receptors is similar for both organs. Conclusions: Our analysis of the T. -
Insecta Mundi 0731: 1–56 Zoobank Registered: Urn:Lsid:Zoobank.Org:Pub:BA35690A-FC73-4E5A-A805-FE9550275FEC
October 11 2019 INSECTA 56 A Journal of World Insect Systematics MUNDI 0731 Fifty new genera of Hesperiidae (Lepidoptera) Qian Cong Institute for Protein Design and Department of Biochemistry University of Washington 1959 NE Pacific Street, HSB J-405, Seattle, WA, 98195 USA Jing Zhang Departments of Biophysics and Biochemistry University of Texas Southwestern Medical Center 5323 Harry Hines Blvd., Dallas, TX, 75390-8816 USA Jinhui Shen Departments of Biophysics and Biochemistry University of Texas Southwestern Medical Center 5323 Harry Hines Blvd., Dallas, TX, 75390-8816 USA Nick V. Grishin Howard Hughes Medical Institute and Departments of Biophysics and Biochemistry University of Texas Southwestern Medical Center 5323 Harry Hines Blvd., Dallas, TX, 75390-9050 USA Date of issue: October 11, 2019 CENTER FOR SYSTEMATIC ENTOMOLOGY, INC., Gainesville, FL Qian Cong, Jing Zhang, Jinhui Shen and Nick V. Grishin Fifty new genera of Hesperiidae (Lepidoptera) Insecta Mundi 0731: 1–56 ZooBank Registered: urn:lsid:zoobank.org:pub:BA35690A-FC73-4E5A-A805-FE9550275FEC Published in 2019 by Center for Systematic Entomology, Inc. P.O. Box 141874 Gainesville, FL 32614-1874 USA http://centerforsystematicentomology.org/ Insecta Mundi is a journal primarily devoted to insect systematics, but articles can be published on any non- marine arthropod. Topics considered for publication include systematics, taxonomy, nomenclature, checklists, faunal works, and natural history. Insecta Mundi will not consider works in the applied sciences (i.e. medical entomology, pest control research, etc.), and no longer publishes book reviews or editorials. Insecta Mundi publishes original research or discoveries in an inexpensive and timely manner, distributing them free via open access on the internet on the date of publication.