Marine Biofilms Constitute a Bank of Hidden Microbial Diversity And
ARTICLE https://doi.org/10.1038/s41467-019-08463-z OPEN Marine biofilms constitute a bank of hidden microbial diversity and functional potential Weipeng Zhang1, Wei Ding1, Yong-Xin Li 1, Chunkit Tam1, Salim Bougouffa 2, Ruojun Wang1, Bite Pei1, Hoyin Chiang1, Pokman Leung 1, Yanhong Lu1, Jin Sun1,HeFu3, Vladimir B Bajic 2, Hongbin Liu1, Nicole S. Webster 4,5 & Pei-Yuan Qian1 Recent big data analyses have illuminated marine microbial diversity from a global per- 1234567890():,; spective, focusing on planktonic microorganisms. Here, we analyze 2.5 terabases of newly sequenced datasets and the Tara Oceans metagenomes to study the diversity of biofilm- forming marine microorganisms. We identify more than 7,300 biofilm-forming ‘species’ that are undetected in seawater analyses, increasing the known microbial diversity in the oceans by more than 20%, and provide evidence for differentiation across oceanic niches. Gen- eration of a gene distribution profile reveals a functional core across the biofilms, comprised of genes from a variety of microbial phyla that may play roles in stress responses and microbe-microbe interactions. Analysis of 479 genomes reconstructed from the biofilm metagenomes reveals novel biosynthetic gene clusters and CRISPR-Cas systems. Our data highlight the previously underestimated ocean microbial diversity, and allow mining novel microbial lineages and gene resources. 1 Department of Ocean Science and Division of Life Science, Hong Kong University of Science and Technology, Hong Kong, China. 2 Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal 23955, Saudi Arabia. 3 Department of Marine Sciences, University of Georgia, Athens 30602 GA, USA.
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