Table S2 Signiﬁcantly Differentially Expressed Genes (Degs) Between Patients with Recurrence(R)

Table S2 Signiﬁcantly differentially expressed genes (DEGs) between patients with recurrence(R) and patients with nonrecurrence(NR)

Gene symbol GeneType Description FDR Style

BOK-AS1 antisense_RNA BOK antisense RNA 1 (non-protein coding) 0.008429262 up

MIR5094 miRNA microRNA 5094 0.003235665 up

MIR7-1 miRNA microRNA 7-1 0.032553893 up

MIR492 miRNA microRNA 492 0.048256537 up

CYP2B7P1 miscRNA cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1 0 down

LOC100506433 miscRNA uncharacterized LOC100506433 4.54E-14 up

LOC100996524 miscRNA 8.47E-14 down

LOC100506791 miscRNA uncharacterized LOC100506791 3.65E-07 down

FLJ41200 miscRNA uncharacterized LOC401492 2.12E-05 down

LOC339166 miscRNA uncharacterized LOC339166 0.000422195 down

UCA1 miscRNA urothelial cancer associated 1 (non-protein coding) 0.000425323 down

LOC170425 miscRNA uncharacterized LOC170425 0.000754675 up

LHFPL3-AS2 miscRNA 0.000762925 down

SSTR5-AS1 miscRNA 0.000838878 down

LOC100499484 miscRNA SUGT1-1300002K09Rik pseudogene 0.000897957 down

C8orf12 miscRNA chromosome 8 open reading frame 12 0.000975285 up

SLC6A10P miscRNA solute carrier family 6 (neurotransmitter transporter, creatine), member 10, pseudogene 0.001308181 down

LINC00461 miscRNA long intergenic non-protein coding RNA 461 0.002096121 up

VNN3 miscRNA vanin 3 0.00220178 up

CES1P1 miscRNA carboxylesterase 1 pseudogene 1 0.002700167 down

CELP miscRNA carboxyl ester lipase pseudogene 0.002832074 down

SPRR2C miscRNA small proline-rich protein 2C (pseudogene) 0.003621463 up

PSORS1C3 miscRNA psoriasis susceptibility 1 candidate 3 (non-protein coding) 0.006254502 down

GOLGA8DP miscRNA golgin A8 family, member D, pseudogene 0.007811981 up

C14orf23 miscRNA chromosome 14 open reading frame 23 0.008617356 down

BCRP3 miscRNA breakpoint cluster region pseudogene 3 0.011430808 down

SYT14L miscRNA synaptotagmin XIV-like 0.016209781 up

ACTN3 miscRNA actinin, alpha 3 0.016617333 down SCARNA6 miscRNA small Cajal body-specific RNA 6 0.016944966 down

FAM183B miscRNA acyloxyacyl hydrolase (neutrophil) 0.017796052 down

LOC653562 miscRNA sodium- and chloride-dependent creatine transporter 1-like 0.018053779 down

GAS6-AS1 miscRNA 0.01850885 down

RPL32P3 miscRNA ribosomal protein L32 pseudogene 3 0.02204645 down

ALDH1L1-AS2 miscRNA 0.024863599 down

FONG miscRNA uncharacterized LOC348751 0.026335755 up

GOLGA8F miscRNA golgin A8 family, member F 0.02792326 up

GOLGA8G miscRNA golgin A8 family, member G 0.031001074 up

TTLL11-IT1 miscRNA 0.031738386 down

LINC00487 miscRNA long intergenic non-protein coding RNA 487 0.038123663 down

LOC100996338 miscRNA 0.042497061 down

LOC100631378 miscRNA uncharacterized 100631378 0.045516251 up

WTAPP1 miscRNA 0.047788921 down

FGG mRNA fibrinogen gamma chain 0 down

TH mRNA tyrosine hydroxylase 0 down

FGA mRNA fibrinogen alpha chain 0 down

MUC5AC mRNA mucin 5AC, oligomeric mucus/gel-forming 0 down

PIP mRNA prolactin-induced protein 0 down

MUM1L1 mRNA melanoma associated antigen (mutated) 1-like 1 0 down

TRIML2 mRNA tripartite motif family-like 2 0 down

CYP2A13 mRNA cytochrome P450, family 2, subfamily A, polypeptide 13 0 down

GABRA1 mRNA gamma-aminobutyric acid (GABA) A receptor, alpha 1 0 up

RXFP2 mRNA relaxin/insulin-like family peptide receptor 2 5.55E-16 up

ARG1 mRNA arginase, liver 3.45E-14 up

BPIFA1 mRNA BPI fold containing family A, member 1 6.48E-14 down

STEAP3 mRNA STEAP family member 3, metalloreductase 2.83E-13 down

C20orf85 mRNA chromosome 20 open reading frame 85 1.85E-11 down

FOXI1 mRNA forkhead box I1 3.87E-11 up

TUBA3E mRNA tubulin, alpha 3e 1.60E-10 down

TBX15 mRNA T-box 15 2.02E-10 down

BPIFA2 mRNA BPI fold containing family A, member 2 2.85E-10 down

GOLGA6L1 mRNA golgin A6 family-like 1 1.03E-09 up SCGB1A1 mRNA secretoglobin, family 1A, member 1 (uteroglobin) 2.43E-09 down

PAX7 mRNA paired box 7 4.02E-09 down

ZNF467 mRNA zinc finger protein 467 4.99E-09 down

MMP13 mRNA matrix metallopeptidase 13 (collagenase 3) 2.44E-08 down

SSTR5 mRNA somatostatin receptor 5 3.36E-08 down

ERN2 mRNA endoplasmic reticulum to nucleus signaling 2 7.53E-08 down

CHP2 mRNA calcineurin B homologous protein 2 9.80E-08 down

LECT1 mRNA leukocyte cell derived chemotaxin 1 1.05E-07 up

LOC440243 mRNA Putative golgin subfamily A member 6-like protein 6 1.32E-07 up

BPIFB1 mRNA BPI fold containing family B, member 1 2.56E-07 down

AMTN mRNA amelotin 3.23E-07 down

PASD1 mRNA PAS domain containing 1 5.18E-07 down

GMNC mRNA geminin coiled-coil domain containing 5.29E-07 down

CCDC144NL mRNA coiled-coil domain containing 144 family, N-terminal like 5.47E-07 down

TFF2 mRNA trefoil factor 2 5.91E-07 up

ATP12A mRNA ATPase, H+/K+ transporting, nongastric, alpha polypeptide 6.21E-07 down

TCHH mRNA trichohyalin 7.83E-07 down

PAX3 mRNA paired box 3 9.41E-07 up

GOLGA6L6 mRNA golgin A6 family-like 6 2.37E-06 up

PTPRT mRNA protein tyrosine phosphatase, receptor type, T 3.07E-06 down

KIF18B mRNA kinesin family member 18B 4.55E-06 up

TEKT1 mRNA tektin 1 4.65E-06 down

IFITM2 mRNA interferon induced transmembrane protein 2 (1-8D) 5.80E-06 down

C4BPA mRNA complement component 4 binding protein, alpha 5.96E-06 down

MUC13 mRNA mucin 13, cell surface associated 6.11E-06 down

SLCO1B1 mRNA solute carrier organic anion transporter family, member 1B1 6.54E-06 up

L3MBTL4 mRNA l(3)mbt-like 4 (Drosophila) 6.55E-06 up

ACTBL2 mRNA actin, beta-like 2 7.84E-06 down

KLHDC7A mRNA kelch domain containing 7A 9.24E-06 down

FGF19 mRNA fibroblast growth factor 19 1.10E-05 up

RPE65 mRNA retinal pigment epithelium-specific protein 65kDa 1.10E-05 up

DHRS2 mRNA dehydrogenase/reductase (SDR family) member 2 1.18E-05 down

SLCO1B7 mRNA solute carrier organic anion transporter family, member 1B7 (non-functional) 1.20E-05 up

KIF15 mRNA kinesin family member 15 1.22E-05 up

PLCH2 mRNA phospholipase C, eta 2 1.24E-05 down

C11orf53 mRNA chromosome 11 open reading frame 53 1.28E-05 down

ZG16 mRNA zymogen granule protein 16 homolog (rat) 1.30E-05 down

MAPK12 mRNA mitogen-activated protein kinase 12 1.52E-05 down

SOX14 mRNA SRY (sex determining region Y)-box 14 1.69E-05 up

CLEC2A mRNA C-type lectin domain family 2, member A 1.84E-05 down

MUCL1 mRNA mucin-like 1 2.14E-05 down

SIRT4 mRNA sirtuin 4 2.29E-05 down

CDYL2 mRNA chromodomain protein, Y-like 2 2.44E-05 down

SPDEF mRNA SAM pointed domain containing ets transcription factor 2.57E-05 down ZIC2 mRNA Zic family member 2 3.26E-05 down

CALN1 mRNA calneuron 1 3.56E-05 up

LEFTY1 mRNA left-right determination factor 1 3.77E-05 down

CAPSL mRNA calcyphosine-like 3.80E-05 down

IYD mRNA iodotyrosine deiodinase 3.80E-05 down

PXMP2 mRNA peroxisomal membrane protein 2, 22kDa 3.87E-05 up

CSF3 mRNA colony stimulating factor 3 (granulocyte) 3.87E-05 up

ATP6V1C2 mRNA ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 4.80E-05 up

MAGEA12 mRNA melanoma antigen family A, 12 4.99E-05 up

CTXN3 mRNA cortexin 3 5.38E-05 down

CSAG1 mRNA chondrosarcoma associated gene 1 5.68E-05 up

LOC440233 mRNA putative golgin subfamily A member 6-like protein 6-like 6.43E-05 up

CDC20B mRNA cell division cycle 20 homolog B (S. cerevisiae) 6.44E-05 down

MS4A8B mRNA membrane-spanning 4-domains, subfamily A, member 8B 6.45E-05 down

NFE4 mRNA transcription factor NF-E4 6.68E-05 up

PAH mRNA phenylalanine hydroxylase 0.000100822 up

LRP2 mRNA low density lipoprotein receptor-related protein 2 0.000113179 up

RFTN2 mRNA raftlin family member 2 0.000113937 down

DNAH5 mRNA dynein, axonemal, heavy chain 5 0.000126655 down

ANKRD1 mRNA ankyrin repeat domain 1 (cardiac muscle) 0.00014766 down

ABCA4 mRNA ATP-binding cassette, sub-family A (ABC1), member 4 0.000152593 down

TKTL1 mRNA transketolase-like 1 0.000170505 down

LOC100132202 mRNA golgin subfamily A member 6-like protein 1-like 0.000171674 up

SERPINA9 mRNA serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 0.000174509 down

GLYATL2 mRNA glycine-N-acyltransferase-like 2 0.000185022 up

mRNA P antigen family, member 2 (prostate associated) 0.000192201 up

NECAB2 mRNA N-terminal EF-hand calcium binding protein 2 0.000195259 up

ADSSL1 mRNA adenylosuccinate synthase like 1 0.000242988 down

SYCE1 mRNA synaptonemal complex central element protein 1 0.000258385 down

SOHLH1 mRNA spermatogenesis and oogenesis specific basic helix-loop-helix 1 0.000263345 down

OIP5 mRNA Opa interacting protein 5 0.000272351 up

LOC645202 mRNA golgin A6 family-like 0.000273282 up

IGLV3-22 mRNA immunoglobulin lambda variable 3-22 (gene/pseudogene) 0.000314841 down

C11orf87 mRNA chromosome 11 open reading frame 87 0.000365619 down

TNFSF18 mRNA tumor necrosis factor (ligand) superfamily, member 18 0.000400819 up

MAGOHB mRNA mago-nashi homolog B (Drosophila) 0.000413737 up

CENPI mRNA centromere protein I 0.000428076 up

ADH1C mRNA alcohol dehydrogenase 1C (class I), gamma polypeptide 0.000452429 down

TAC4 mRNA tachykinin 4 (hemokinin) 0.000455556 down

FAM205A mRNA family with sequence similarity 205, member A 0.000474369 up

HOXC12 mRNA homeobox C12 0.000488927 down

AQP5 mRNA aquaporin 5 0.000507553 down

WDR76 mRNA WD repeat domain 76 0.000547365 up

GINS4 mRNA GINS complex subunit 4 (Sld5 homolog) 0.000550231 up KISS1R mRNA KISS1 receptor 0.000561288 up

NOL4 mRNA nucleolar protein 4 0.000592639 up

SAA2-SAA4 mRNA SAA2-SAA4 readthrough 0.000593523 up

AMPD1 mRNA adenosine monophosphate deaminase 1 0.000646794 down

MMP10 mRNA matrix metallopeptidase 10 (stromelysin 2) 0.000659187 down

C10orf82 mRNA chromosome 10 open reading frame 82 0.000687954 up

RANBP3L mRNA RAN binding protein 3-like 0.000724405 up

CHGB mRNA chromogranin B (secretogranin 1) 0.000751127 up

WNT7A mRNA wingless-type MMTV integration site family, member 7A 0.000801507 down

SLC35G3 mRNA solute carrier family 35, member G3 0.000811571 down

S100A12 mRNA S100 calcium binding protein A12 0.000850699 up

SLCO1B3 mRNA solute carrier organic anion transporter family, member 1B3 0.000952069 up

BASP1 mRNA brain abundant, membrane attached signal protein 1 0.001024353 down

ACY3 mRNA aspartoacylase (aminocyclase) 3 0.001046065 down

WFDC12 mRNA WAP four-disulfide core domain 12 0.001070595 up

RBBP8 mRNA retinoblastoma binding protein 8 0.001071267 up

GATA4 mRNA GATA binding protein 4 0.001112689 down

CXXC5 mRNA CXXC finger protein 5 0.001278093 down

IGKV2-4 mRNA immunoglobulin kappa variable 2-4 (pseudogene) 0.001286421 down

TRIM58 mRNA tripartite motif containing 58 0.001325729 down

ADAMTS18 mRNA ADAM metallopeptidase with thrombospondin type 1 motif, 18 0.001360284 up

NEFM mRNA neurofilament, medium polypeptide 0.001379341 down

CXorf61 mRNA chromosome X open reading frame 61 0.001399519 up

HMGCS2 mRNA 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) 0.001403873 down

SPRR2F mRNA small proline-rich protein 2F 0.001407214 up

RASA3 mRNA RAS p21 protein activator 3 0.001411979 down

ESPN mRNA espin 0.001413234 down

PLEKHS1 mRNA 0.001432315 down

B3GNT3 mRNA UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 0.001481104 down

ZP4 mRNA zona pellucida glycoprotein 4 0.001500846 up

ELAVL2 mRNA ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 0.001540856 up

SLC30A8 mRNA solute carrier family 30 (zinc transporter), member 8 0.001585293 up

FABP7 mRNA fatty acid binding protein 7, brain 0.001641361 up

IL23A mRNA interleukin 23, alpha subunit p19 0.001721539 up

MKRN3 mRNA makorin ring finger protein 3 0.001767013 up

EN2 mRNA engrailed homeobox 2 0.001809738 down

PNMA5 mRNA paraneoplastic antigen like 5 0.001814953 down

EDIL3 mRNA EGF-like repeats and discoidin I-like domains 3 0.001838427 down

CAPN8 mRNA calpain 8 0.001905978 down

ADAMTS20 mRNA ADAM metallopeptidase with thrombospondin type 1 motif, 20 0.001923842 up

NPAS1 mRNA neuronal PAS domain protein 1 0.001958883 down

KRT20 mRNA keratin 20 0.002045578 up

ADRA2C mRNA adrenergic, alpha-2C-, receptor 0.002057314 down TOX3 mRNA TOX high mobility group box family member 3 0.002131587 down

MSGN1 mRNA mesogenin 1 0.002162347 up

WDR86 mRNA WD repeat domain 86 0.002171932 down

IL36G mRNA interleukin 36, gamma 0.00226079 up

HABP2 mRNA hyaluronan binding protein 2 0.002278718 down

ZNF502 mRNA zinc finger protein 502 0.002290332 up

SLC44A4 mRNA solute carrier family 44, member 4 0.002471429 down

NUF2 mRNA NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae) 0.002494066 up

SGOL1 mRNA shugoshin-like 1 (S. pombe) 0.002583561 up

SAA2 mRNA serum amyloid A2 0.002605522 up

UMODL1 mRNA uromodulin-like 1 0.0026503 down

IGKV1-37 mRNA immunoglobulin kappa variable 1-37 (non-functional) 0.002838901 down

SHH mRNA sonic hedgehog 0.002866803 up

NLRP7 mRNA NLR family, pyrin domain containing 7 0.002878038 up

AKNAD1 mRNA AKNA domain containing 1 0.002932438 down

IGHV3-71 mRNA immunoglobulin heavy variable 3-71 (pseudogene) 0.002982967 down

KLK14 mRNA kallikrein-related peptidase 14 0.003251037 up

CENPK mRNA centromere protein K 0.003269453 up

ESRRB mRNA estrogen-related receptor beta 0.003285223 down

HIST1H4A mRNA histone cluster 1, H4a 0.003302927 up

CPNE4 mRNA copine IV 0.003310671 up

ASCL4 mRNA achaete-scute complex homolog 4 (Drosophila) 0.003335758 up

MPP4 mRNA membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 0.003383881 up

HHLA2 mRNA HERV-H LTR-associating 2 0.003433411 up

TMEM121 mRNA transmembrane protein 121 0.003498887 down

IFIT2 mRNA interferon-induced protein with tetratricopeptide repeats 2 0.003540891 down

PPP1R32 mRNA protein phosphatase 1, regulatory subunit 32 0.003541904 down

IGKV1D-12 mRNA immunoglobulin kappa variable 1D-12 0.003767258 down

DMBT1 mRNA deleted in malignant brain tumors 1 0.003800139 down

THPO mRNA thrombopoietin 0.003914605 down

ST8SIA5 mRNA ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 0.004312013 down

B4GALNT2 mRNA beta-1,4-N-acetyl-galactosaminyl transferase 2 0.004373938 down

TFF1 mRNA trefoil factor 1 0.004466632 down

IGKV2-18 mRNA immunoglobulin kappa variable 2-18 (pseudogene) 0.004515464 down

HOXB13 mRNA homeobox B13 0.004621173 up

FGF3 mRNA fibroblast growth factor 3 0.004665669 up

LCE1F mRNA late cornified envelope 1F 0.004752236 down

GIPR mRNA gastric inhibitory polypeptide receptor 0.004876926 down

SUSD2 mRNA sushi domain containing 2 0.005103434 down

USH1C mRNA Usher syndrome 1C (autosomal recessive, severe) 0.005304478 up

TFAP2B mRNA transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 0.00530803 up

KIAA0895 mRNA KIAA0895 0.005308827 up

REG1A mRNA regenerating islet-derived 1 alpha 0.005500084 up B3GNT6 mRNA UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase) 0.005661736 down

KIF17 mRNA kinesin family member 17 0.005675208 down

SLC6A11 mRNA solute carrier family 6 (neurotransmitter transporter, GABA), member 11 0.005848466 down

HMGN5 mRNA high mobility group nucleosome binding domain 5 0.005920257 up

KCNK13 mRNA potassium channel, subfamily K, member 13 0.006132549 up

NOXO1 mRNA NADPH oxidase organizer 1 0.00631885 up

SYT9 mRNA synaptotagmin IX 0.006375959 down

FLJ23152 mRNA uncharacterized LOC401236 0.006385774 down

LOC100996600 mRNA 0.006447507 down

IGHV1-69 mRNA immunoglobulin heavy variable 1-69 0.006467979 down

IGLV7-43 mRNA immunoglobulin lambda variable 7-43 0.006702509 down

SEMA3G mRNA sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G 0.006850694 down

SLC16A8 mRNA solute carrier family 16, member 8 (monocarboxylic acid transporter 3) 0.006908955 down

IRX6 mRNA iroquois homeobox 6 0.007289527 up

SERPINB12 mRNA serpin peptidase inhibitor, clade B (ovalbumin), member 12 0.007315297 up

SLC28A2 mRNA solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 0.007345335 down

ZIC5 mRNA Zic family member 5 0.007396459 down

SCTR mRNA secretin receptor 0.007414743 down

ASCL1 mRNA achaete-scute complex homolog 1 (Drosophila) 0.007548545 up

FOXG1 mRNA forkhead box G1 0.007664545 down

CYP4B1 mRNA cytochrome P450, family 4, subfamily B, polypeptide 1 0.007802992 down

ALDH1L1 mRNA aldehyde dehydrogenase 1 family, member L1 0.007868236 down

MAGEB2 mRNA melanoma antigen family B, 2 0.007949223 up

BPIFB2 mRNA BPI fold containing family B, member 2 0.008181329 down

HMMR mRNA hyaluronan-mediated motility receptor (RHAMM) 0.008210982 up

HOXB6 mRNA homeobox B6 0.008580646 down

GSTM5 mRNA glutathione S-transferase mu 5 0.008944394 down

CCDC135 mRNA coiled-coil domain containing 135 0.009094899 down

CYP2F1 mRNA cytochrome P450, family 2, subfamily F, polypeptide 1 0.009260219 down

ISL1 mRNA ISL LIM homeobox 1 0.009517179 up

PYROXD1 mRNA pyridine nucleotide-disulphide oxidoreductase domain 1 0.009691195 up

PIWIL1 mRNA piwi-like 1 (Drosophila) 0.009741662 down

LPA mRNA lipoprotein, Lp(a) 0.009758023 down

SCGN mRNA secretagogin, EF-hand calcium binding protein 0.009760346 up

MLPH mRNA melanophilin 0.0098923 down

CLDN19 mRNA claudin 19 0.010136714 up

SLC4A4 mRNA solute carrier family 4, sodium bicarbonate cotransporter, member 4 0.010321049 down

IGHJ1 mRNA immunoglobulin heavy joining 1 0.010400903 down

MOBP mRNA myelin-associated oligodendrocyte basic protein 0.010584976 up

CHRNA9 mRNA cholinergic receptor, nicotinic, alpha 9 0.010741761 down

ALX4 mRNA ALX homeobox 4 0.010893744 down PLEKHD1 mRNA pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 0.010997797 down

NINJ2 mRNA ninjurin 2 0.010999782 down

CD177 mRNA CD177 molecule 0.011557707 up

TNN mRNA tenascin N 0.011693089 down

IQCH mRNA IQ motif containing H 0.011920156 up

RTP1 mRNA receptor (chemosensory) transporter protein 1 0.012053203 up

KLRK1 mRNA killer cell lectin-like receptor subfamily K, member 1 0.01225464 up

ZNF585A mRNA zinc finger protein 585A 0.012427957 up

CP mRNA ceruloplasmin (ferroxidase) 0.012453954 down

LOC100996693 mRNA 0.012472021 down

BCAR3 mRNA breast cancer anti-estrogen resistance 3 0.01279639 down

IGKV6D-41 mRNA immunoglobulin kappa variable 6D-41 (non-functional) 0.013490974 down

SYT7 mRNA synaptotagmin VII 0.013543626 down

POU6F2 mRNA POU class 6 homeobox 2 0.013778132 up

MYPN mRNA myopalladin 0.013963059 down

RAB41 mRNA RAB41, member RAS oncogene family 0.014097338 down

TMEM132C mRNA transmembrane protein 132C 0.014584228 down

DOK7 mRNA docking protein 7 0.014833344 down

ERC2 mRNA ELKS/RAB6-interacting/CAST family member 2 0.014998363 up

SRMS mRNA src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites 0.015091141 down

CCKAR mRNA cholecystokinin A receptor 0.015191233 down

CLDN9 mRNA claudin 9 0.015242597 down

PLK4 mRNA polo-like kinase 4 0.015363231 up

CFTR mRNA cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 0.015488571 down

LOC100996633 mRNA 0.015515169 down

CUX2 mRNA cut-like homeobox 2 0.015737581 up

TBX20 mRNA T-box 20 0.016024992 up

ASGR2 mRNA asialoglycoprotein receptor 2 0.016411779 up

LOR mRNA loricrin 0.016532989 up

PEAR1 mRNA platelet endothelial aggregation receptor 1 0.016620688 down

AWAT1 mRNA acyl-CoA wax alcohol acyltransferase 1 0.017181156 up

ZNF675 mRNA zinc finger protein 675 0.017283778 up

FOXA3 mRNA forkhead box A3 0.017463613 down

NPSR1 mRNA neuropeptide S receptor 1 0.017521227 up

PADI3 mRNA peptidyl arginine deiminase, type III 0.017627708 down

PCDH11X mRNA protocadherin 11 X-linked 0.017668852 up KLRC4-KLRK1 mRNA KLRC4-KLRK1 readthrough 0.017772995 up

TEX101 mRNA testis expressed 101 0.017848845 up

NAT8B mRNA N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene) 0.018688784 down

CHRD mRNA chordin 0.018725807 down

NCAN mRNA neurocan 0.019161702 up

CNTFR mRNA ciliary neurotrophic factor receptor 0.019438764 down

IGKV2D-14 mRNA immunoglobulin kappa variable 2D-14 (pseudogene) 0.019482706 down

FAM154B mRNA family with sequence similarity 154, member B 0.020222564 down

PROC mRNA protein C (inactivator of coagulation factors Va and VIIIa) 0.020290842 down

FREM2 mRNA FRAS1 related extracellular matrix protein 2 0.020293569 up

ESPL1 mRNA extra spindle pole bodies homolog 1 (S. cerevisiae) 0.020893927 up

SPATA5 mRNA spermatogenesis associated 5 0.021010074 up

CEL mRNA carboxyl ester lipase (bile salt-stimulated lipase) 0.021467101 down

RGS17 mRNA regulator of G-protein signaling 17 0.021604097 down

IL36RN mRNA interleukin 36 receptor antagonist 0.022028218 up

ALOX12B mRNA arachidonate 12-lipoxygenase, 12R type 0.022266657 up

DCX mRNA doublecortin 0.022509683 up

FFAR2 mRNA free fatty acid receptor 2 0.023068947 up

AGMO mRNA alkylglycerol monooxygenase 0.023078216 up

RXFP3 mRNA relaxin/insulin-like family peptide receptor 3 0.023436764 down

SORCS3 mRNA sortilin-related VPS10 domain containing receptor 3 0.023521712 up

CYP2B6 mRNA cytochrome P450, family 2, subfamily B, polypeptide 6 0.023601129 down

LOC100291786 mRNA ig kappa chain V-III region VH-like 0.024590868 down

NTSR2 mRNA neurotensin receptor 2 0.024667371 down

GBX2 mRNA gastrulation brain homeobox 2 0.025112175 down

TDGF1 mRNA teratocarcinoma-derived growth factor 1 0.025168356 down

GABRG3 mRNA gamma-aminobutyric acid (GABA) A receptor, gamma 3 0.025383004 up

CPA5 mRNA carboxypeptidase A5 0.025513372 down

ALPP mRNA alkaline phosphatase, placental 0.025989349 down

VSTM2L mRNA V-set and transmembrane domain containing 2 like 0.026053593 down

LOC100129924 mRNA uncharacterized LOC100129924 0.026353422 down

KCNC3 mRNA potassium voltage-gated channel, Shaw-related subfamily, member 3 0.027156966 down

SPRR2B mRNA small proline-rich protein 2B 0.027259147 up

CRHBP mRNA corticotropin releasing hormone binding protein 0.028307689 down

PPP1R14C mRNA protein phosphatase 1, regulatory (inhibitor) subunit 14C 0.028376483 up

PIGR mRNA polymeric immunoglobulin receptor 0.028402552 down CASP14 mRNA caspase 14, apoptosis-related cysteine peptidase 0.028544726 down

TRBV20OR9-2 mRNA T cell receptor beta variable 20/OR9-2 (non-functional) 0.028876476 down

GRM4 mRNA glutamate receptor, metabotropic 4 0.029578494 down

LOC388849 mRNA uncharacterized LOC388849 0.029634902 down

ABCC3 mRNA ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.030179276 down

LOC100996329 mRNA 0.03018954 down

FAM181B mRNA family with sequence similarity 181, member B 0.03031516 down

ANKRD20A19P mRNA ankyrin repeat domain 20 family, member A19, pseudogene 0.030596116 down

IGLJ7 mRNA immunoglobulin lambda joining 7 0.030820898 down

MPPED1 mRNA metallophosphoesterase domain containing 1 0.030883085 up

GLB1L3 mRNA galactosidase, beta 1-like 3 0.031090351 down

SAA1 mRNA serum amyloid A1 0.031175766 up

CRB2 mRNA crumbs homolog 2 (Drosophila) 0.031423246 up

DNAI1 mRNA dynein, axonemal, intermediate chain 1 0.031579972 down

PLA2G4E mRNA phospholipase A2, group IVE 0.033361821 up

CAPN13 mRNA calpain 13 0.034071248 down

LRRC38 mRNA leucine rich repeat containing 38 0.034235888 down

SLC10A5 mRNA solute carrier family 10 (sodium/bile acid cotransporter family), member 5 0.035013418 up

SNAPC2 mRNA small nuclear RNA activating complex, polypeptide 2, 45kDa 0.035052064 down

CPLX3 mRNA complexin 3 0.035211288 up

PDZK1IP1 mRNA PDZK1 interacting protein 1 0.035307886 up

AMY1B mRNA amylase, alpha 1B (salivary) 0.03630872 up

MMP8 mRNA matrix metallopeptidase 8 (neutrophil collagenase) 0.03687921 up

HSD17B13 mRNA hydroxysteroid (17-beta) dehydrogenase 13 0.03701854 down

GSTM1 mRNA glutathione S-transferase mu 1 0.037854386 down

PNMA2 mRNA paraneoplastic antigen MA2 0.038221412 down

UPK1A mRNA uroplakin 1A 0.038542645 up

IGLV3-31 mRNA immunoglobulin lambda variable 3-31 (pseudogene) 0.039609532 down

LOC100996358 mRNA 0.039663787 up

TAAR1 mRNA trace amine associated receptor 1 0.040263124 up

CXorf22 mRNA chromosome X open reading frame 22 0.040472181 up

SHISA6 mRNA shisa homolog 6 (Xenopus laevis) 0.041215285 down

MUC3A mRNA mucin 3A, cell surface associated 0.041528702 down

DRD1 mRNA dopamine receptor D1 0.041713922 down

PRAME mRNA preferentially expressed antigen in melanoma 0.042126758 down

VIL1 mRNA villin 1 0.042260071 up

KRT40 mRNA keratin 40 0.042381588 down

HPX mRNA hemopexin 0.042612238 down

CDH12 mRNA cadherin 12, type 2 (N-cadherin 2) 0.042762259 up

NKX1-2 mRNA NK1 homeobox 2 0.043178496 down PGA3 mRNA pepsinogen 3, group I (pepsinogen A) 0.043327995 up

PGA4 mRNA pepsinogen 4, group I (pepsinogen A) 0.043327995 up

BAALC mRNA brain and acute leukemia, cytoplasmic 0.043329788 down

GABRG2 mRNA gamma-aminobutyric acid (GABA) A receptor, gamma 2 0.043363477 up

GFAP mRNA glial fibrillary acidic protein 0.043404826 down

FADS3 mRNA fatty acid desaturase 3 0.044098502 down

S100A7L2 mRNA S100 calcium binding protein A7-like 2 0.044336278 up

OCLN mRNA occludin 0.04471763 up

SLC14A1 mRNA solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 0.045138307 down

BOLA2B mRNA bolA homolog 2B (E. coli) 0.04611029 up

CCL20 mRNA chemokine (C-C motif) ligand 20 0.046201 up

KCNG1 mRNA potassium voltage-gated channel, subfamily G, member 1 0.046409028 down

IL19 mRNA interleukin 19 0.046604453 up

RTN4RL1 mRNA reticulon 4 receptor-like 1 0.046622262 down

KSR2 mRNA kinase suppressor of ras 2 0.046881712 up

LOC100133023 mRNA ig heavy chain V-III region VH26-like 0.04700184 down

ZGLP1 mRNA zinc finger, GATA-like protein 1 0.047072871 down

CLEC4F mRNA C-type lectin domain family 4, member F 0.047139341 down

IGLV4-60 mRNA immunoglobulin lambda variable 4-60 0.047263226 up

CCL2 mRNA chemokine (C-C motif) ligand 2 0.047317592 up

SULT1E1 mRNA sulfotransferase family 1E, estrogen-preferring, member 1 0.04786736 down

PRRT4 mRNA proline-rich transmembrane protein 4 0.047981363 down

CTSF mRNA cathepsin F 0.048086005 down

AQP7 mRNA aquaporin 7 0.048554411 down

AGPAT9 mRNA 1-acylglycerol-3-phosphate O-acyltransferase 9 0.048849953 up

IGKV2D-18 mRNA immunoglobulin kappa variable 2D-18 (pseudogene) 0.049178625 down

IGLC4 mRNA immunoglobulin lambda constant 4 (pseudogene) 0.049211089 down

RFTN1P1 ncRNA raftlin, lipid raft linker 1 pseudogene 1 1.25E-06 down

NBEAP2 ncRNA neurobeachin pseudogene 2 8.93E-06 down

LOC653698 ncRNA mitochondrial carrier protein pseudogene 2.08E-05 up

LOC100129276 ncRNA RNA exonuclease 1 homolog 0.000195178 down

CD177P1 ncRNA CD177 molecule pseudogene 1 0.000618676 up

OR7E22P ncRNA olfactory receptor, family 7, subfamily E, member 22 pseudogene 0.000649062 up

GSTA4P ncRNA glutathione S-transferase A pseudogene 0.000715801 up

GAPDHP32 ncRNA glyceraldehyde 3 phosphate dehydrogenase pseudogene 32 0.001316798 up

LOC100420018 ncRNA WEE1 homolog 2 (S. pombe) pseudogene 0.001360377 down

RPL39P20 ncRNA ribosomal protein L39 pseudogene 20 0.001706281 up

GAPDHP35 ncRNA glyceraldehyde 3 phosphate dehydrogenase pseudogene 35 0.001797544 up

CYP2T3P ncRNA cytochrome P450, family 2, subfamily T, polypeptide 3 pseudogene 0.002208344 down

HCG4P7 ncRNA HLA complex group 4 pseudogene 7 0.002922308 down

LOC100418814 ncRNA metadherin pseudogene 0.003205766 down

OR10Y1P ncRNA olfactory receptor, family 10, subfamily Y, member 1 pseudogene 0.003518071 down LOC646873 ncRNA slowmo homolog 2 (Drosophila) pseudogene 0.003883796 up

CSF2RBP1 ncRNA colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) pseudogene 1 0.004187682 down

SALL4P2 ncRNA sal-like 4 (Drosophila) pseudogene 2 0.005133592 down

LOC100420353 ncRNA tripartite motif-containing 60 pseudogene 0.00549569 up

LOC100420216 ncRNA arachidonate lipoxygenase 3 pseudogene 0.005925644 up

RPS21P6 ncRNA ribosomal protein S21 pseudogene 6 0.006024505 up

IGKV2OR2-10 ncRNA immunoglobulin kappa variable 2/OR2-10 (pseudogene) 0.007131731 down

IGKV1OR22-1 ncRNA immunoglobulin kappa variable 1/OR22-1 (pseudogene) 0.00910031 down

LOC100419008 ncRNA proline rich 20B pseudogene 0.009735932 down

LOC100420694 ncRNA transmembrane protease, serine 11B pseudogene 0.010186348 up

TPSP2 ncRNA 0.010411769 down

LOC390846 ncRNA golgi SNAP receptor complex member 2 pseudogene 0.010823282 down

LOC645129 ncRNA zinc finger and BTB domain containing 45 pseudogene 0.010830448 down

RDXP2 ncRNA radixin pseudogene 2 0.01085951 down

LOC646797 ncRNA glutamyl aminopeptidase (aminopeptidase A) pseudogene 0.011342571 up

LOC100131425 ncRNA LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene 0.011472732 up

SRP68P2 ncRNA signal recognition particle 68kDa pseudogene 2 0.012108001 down

HSPD1P11 ncRNA heat shock 60kDa protein 1 (chaperonin) pseudogene 11 0.013174748 down

LOC100420464 ncRNA salvador homolog 1 (Drosophila) pseudogene 0.014724816 down

LOC401533 ncRNA DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 pseudogene 0.017091272 down

SRP68P1 ncRNA signal recognition particle 68kDa pseudogene 1 0.017225445 down

ANKRD20A7P ncRNA ankyrin repeat domain 20 family, member A7, pseudogene 0.018553552 up

OR7E62P ncRNA olfactory receptor, family 7, subfamily E, member 62 pseudogene 0.020740469 down

NDUFA9P1 ncRNA NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, pseudogene 1 0.0213094 up

GLRXP1 ncRNA glutaredoxin (thioltransferase) pseudogene 1 0.021363665 down

TUBG1P ncRNA tubulin, gamma 1 pseudogene 0.021917019 up

RPL6P13 ncRNA ribosomal protein L6 pseudogene 13 0.023025429 up

MAPK6PS6 ncRNA mitogen-activated protein kinase 6 pseudogene 6 0.024377682 up

RPLP0P4 ncRNA ribosomal protein, large, P0 pseudogene 4 0.024871879 up

LOC100420005 ncRNA fatty acyl CoA reductase 2 pseudogene 0.025127444 down

LOC100130935 ncRNA CSAG family pseudogene 0.026896609 up

LOC100420693 ncRNA solute carrier family 47, member 2 pseudogene 0.028026453 up

IGHV1OR15-2 ncRNA immunoglobulin heavy variable 1/OR15-2 (pseudogene) 0.028691827 down

OR7M1P ncRNA olfactory receptor, family 7, subfamily M, member 1 pseudogene 0.029233749 down

FTOP1 ncRNA 0.029395376 down

CPP ncRNA ceruloplasmin (ferroxidase) pseudogene 0.03182548 down

LOC751837 ncRNA WD repeat domain 57 (U5 snRNP specific) pseudogene 0.032738599 up

GAPDHP64 ncRNA glyceraldehyde-3-phosphate dehydrogenase pseudogene 64 0.032904178 up

VN1R54P ncRNA vomeronasal 1 receptor 54 pseudogene 0.033627895 down

LOC100421704 ncRNA BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 0.037179886 up

RPL7AP28 ncRNA ribosomal protein L7a pseudogene 28 0.044782085 up

LOC100132977 ncRNA chromosome 2 open reading frame 27B pseudogene 0.045160704 down GAPDHP44 ncRNA glyceraldehyde 3 phosphate dehydrogenase pseudogene 44 0.045614956 up

LOC100131546 ncRNA endothelin-converting enzyme-like 1-like 0.045619378 up

IFITM9P ncRNA interferon induced transmembrane protein 9 pseudogene 0.048371144 down

LOC100130114 ncRNA Spi-C transcription factor (Spi-1/PU.1 related) pseudogene 0.048870112 down

SNORA61 snoRNA small nucleolar RNA, H/ACA box 61 0.0251428 up

SNAR-G1 snRNA small ILF3/NF90-associated RNA G1 0.004301031 down

SNAR-H snRNA small ILF3/NF90-associated RNA H 0.017181156 up

TRNE tRNA tRNA 0.020292083 up