Buku Ini Tidak Diperjualbelikan. Buku Ini Tidak Diperjualbelikan

Total Page:16

File Type:pdf, Size:1020Kb

Buku Ini Tidak Diperjualbelikan. Buku Ini Tidak Diperjualbelikan diperjualbelikan. tidak ini Buku diperjualbelikan. tidak ini Buku diperjualbelikan. All rights reserved. No part of this publication may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, tidak or other electronic or mechanical methods, without the prior written permission of the publisher, except in the case of brief quotations embodied ini in critical reviews and certain other noncommercial uses permitted by copyright law. Buku LIPI Press Buku ini tidak diperjualbelikan. © 2016 Indonesian Institute of Sciences (LIPI) Research Center for Biotechnology Cataloging in Publication Exploring Indonesian Microbial Genetic Resources for Industrial Application/Endang Sukara and Puspita Lisdiyanti (Eds.).–Jakarta: LIPI Press, 2016. xii + 221 hlm.; 14,8 x 21 cm ISBN 978-979-799-864-6 1. Microbes 2. Industrial application 3. Indonesia 660.62 Copy editor : Martinus Helmiawan Proofreader : Noviastuti Putri Indrasari and Sarwendah Puspita Dewi Layouter : Nur Aly and Rahma Hilma Taslima Cover designer : Dhevi E. I. R. Mahelingga First Edition : December 2016 Published by: LIPI Press, member of Ikapi Jln. Gondangdia Lama 39, Menteng, Jakarta 10350 Phone: (021) 314 0228, 314 6942 Fax.: (021) 314 4591 E-mail: [email protected] LIPI Press @lipi_press diperjualbelikan. tidak ini Buku Contents Editorial Note ..................................................................................................... vii Foreword .............................................................................................................. ix Preface .................................................................................................................. xi Prologue: Research Experiences on the Use of Indonesian Microbial Genetic Resources by Microbiologists at the Indonesian Institute of Sciences (LIPI) Endang Sukara and Puspita Lisdiyanti ......................................................1 Rhizobium, and Its Potential to Support Plants Growth and Improve Soybean Production Harmastini Sukiman and Sylvia J. R. Lekatompessy ............................. 15 Taxonomy, Diversity, and Industrial Application of Acetic Acid Bacteria Puspita Lisdiyanti ...................................................................................... 31 Bacterial Cellulose Ruth Melliawati ......................................................................................... 55 Lactic Acid Bacteria from Fermented Food and Feed Yantyati Widyastuti .................................................................................. 75 Future Challenges of Yeast and the Associated Microbes in Ragi diperjualbelikan. and Tape Atit Kanti .................................................................................................... 91 tidak Oligosaccharides, Its Related Microbes and Enzymes ini Yopi ........................................................................................................... 115 Buku v Industrial Potential of Rhizopus Oligosporus Endang Sukara ......................................................................................... 135 Amylases of Aspergillus Awamori KT-11 and Its Industrial Uses Trisanti Anindyawati .............................................................................. 155 Collection of Indonesian Actinomycetes and Its Uses Shanti Ratnakomala, Puspita Lisdiyanti, and Yantyati Widyastuti .. 177 Epilogue: Microbiology for Better Future Life Puspita Lisdiyanti and Endang Sukara ................................................. 205 Index ................................................................................................................. 213 About the Authors ........................................................................................... 217 diperjualbelikan. tidak ini Buku vi | Exploring Indonesian Microbial … Editorial Note As a scientific publisher, LIPI Press holds on high responsibility to provide high-quality scientific publication. The provision of qualified publication is the epitome of our works to participate in enlightening society intelligence and awareness as stated in The 1945 Constitution of the Republic of Indonesia. The edited book, Exploring Indonesian Microbial Genetic Re- sources for Industrial Application offers some important findings on the exploration and utilization on the microbial genetic resources in Indonesia. Through this book, some intensive exploration on micro- bial genetic resources in Indonesia, many new species and even new genus of important microbial taxa have continuously been discovered. This book serves to highlight the significant achievements, especially in the area of microbiology, carried out by the microbiologists in Indonesian Institute of Sciences (LIPI). We surely hope this book could give new insights and infor- mation, especially on diversity of the microbial genetic resources in diperjualbelikan. Indonesia and its potential utilization. As a final note, we would like to deliver our heartfelt gratitude tidak to everyone taking part in the process of this book. ini LIPI Press Buku vii viii | Exploring Indonesian Microbial… diperjualbelikan. tidak ini Buku Foreword I am very delighted and I really appreciate this bright initiative of LIPI’s researchers to publish a book entitled Exploring Indonesian Microbial Genetic Resources for Industrial Application. This publication certainly helps LIPI to highlight the work being conducted and sets of achievement reached by LIPI’s microbiologists. I witness that there are number of significant achievements in the area of microbiology carried out at LIPI. The dedication of LIPI’s microbiologists marks a new era for LIPI. The number of international scientific cooperation on exploration and utilization of Indonesian microbial genetic resources has been increasing steadily. Through this cooperation, LIPI has successfully upgraded human resources and research capability. The most important achievement is that through the intensive exploration on microbial genetic resources in Indone- sia, many new species and even new genus of important microbial taxa have continuously been discovered. With this, LIPI has proven a significant contribution to the advancement of science in the field diperjualbelikan. of microbiology at global level. The number of microorganism collection continuously increases, tidak some have been studied for its potential utilization, and some are still awaiting for further studies. Upon this achievement, collection of LIPI ini is not limited to those of plant specimens at Herbarium Bogoriense, Buku ix living plant species at Botanic Gardens, and the collection of animal specimens at Museum Zoologicum Bogoriense, but also include living microbial genetic resources. It is also important to note that through a hard work and high dedication of LIPI’s microbiologists, we could now demonstrate the future value of microbial genetic resources in supporting sustainable development of the country. I do believe that our microbial genetic resources could provide solution to various problems faced by Indonesia and even other countries. We could demonstrate and offer the usefulness of our collection at the grass root level to support pro poor, pro growth, pro job, and pro green initiatives. It is well-timed for LIPI to search strategic partners to con- vert research output to become outcome and provide impact for Indonesian sustainable economic development. At the same time, it is also opportunity for LIPI to build and establish instrument to conserve and sustain the use of microbial genetic resources. LIPI has storage facilities for the conservation of microbial genetic resources, which is called Indonesian Culture Collection (InaCC) which meets international standard as set out by the Budapest Treaty. With this facility, Indonesia now has a facility which can deposit microbial genetic resources, including patent materials and ready for broader collaboration. Jakarta, 12 June 2016 Deputy Chairman for Life Sciences, diperjualbelikan. Indonesian Institute of Sciences (LIPI) tidak Prof. Dr. Ir. Enny Sudarmonowati ini Buku x | Exploring Indonesian Microbial … Preface Indonesia is a maritime country sparkled by more than 17,000 islands. Each island is isolated one and another for hundred thousands years. Indonesia is also a volcanic archipelago that forms a ring of fire. Indo- nesia has diverse ecosystem types, ranging from mountains covered by snow in Papua to a deep sea in Wallace Weber imaginary line region. These facts are gifts for Indonesia’s biodiversity as Indonesia becomes a truly mega biodiversity country. In fact, Indonesia is the second largest mega biodiversity country in the world after Brazil. Nevertheless, biodiversity of microbes described by many scien- tists in Indonesia is limited compared to plant and animal biodiversity. The biodiversity of microbes in the country has yet to be explored extensively. Scientific work on Indonesian microbial resources has already been started in late 1800 by Dr. M. Treub at Bogor Garden. However, the information on Indonesian microbial genetic resources is still very limited. Treub himself was a botanist. He, for nearly 30 years between 1880 and 1909, collected and described many micro- diperjualbelikan. organisms such as fungi, microalgae, and bacteria. The work of Treub, however, came to a halt as no one followed on his footsteps. Only a tidak little more than 50 years later, the study on microbes in Indonesia was continued in 1960s by Indonesian scientists. Yet, the progress ini was slow
Recommended publications
  • Study of Actinobacteria and Their Secondary Metabolites from Various Habitats in Indonesia and Deep-Sea of the North Atlantic Ocean
    Study of Actinobacteria and their Secondary Metabolites from Various Habitats in Indonesia and Deep-Sea of the North Atlantic Ocean Von der Fakultät für Lebenswissenschaften der Technischen Universität Carolo-Wilhelmina zu Braunschweig zur Erlangung des Grades eines Doktors der Naturwissenschaften (Dr. rer. nat.) genehmigte D i s s e r t a t i o n von Chandra Risdian aus Jakarta / Indonesien 1. Referent: Professor Dr. Michael Steinert 2. Referent: Privatdozent Dr. Joachim M. Wink eingereicht am: 18.12.2019 mündliche Prüfung (Disputation) am: 04.03.2020 Druckjahr 2020 ii Vorveröffentlichungen der Dissertation Teilergebnisse aus dieser Arbeit wurden mit Genehmigung der Fakultät für Lebenswissenschaften, vertreten durch den Mentor der Arbeit, in folgenden Beiträgen vorab veröffentlicht: Publikationen Risdian C, Primahana G, Mozef T, Dewi RT, Ratnakomala S, Lisdiyanti P, and Wink J. Screening of antimicrobial producing Actinobacteria from Enggano Island, Indonesia. AIP Conf Proc 2024(1):020039 (2018). Risdian C, Mozef T, and Wink J. Biosynthesis of polyketides in Streptomyces. Microorganisms 7(5):124 (2019) Posterbeiträge Risdian C, Mozef T, Dewi RT, Primahana G, Lisdiyanti P, Ratnakomala S, Sudarman E, Steinert M, and Wink J. Isolation, characterization, and screening of antibiotic producing Streptomyces spp. collected from soil of Enggano Island, Indonesia. The 7th HIPS Symposium, Saarbrücken, Germany (2017). Risdian C, Ratnakomala S, Lisdiyanti P, Mozef T, and Wink J. Multilocus sequence analysis of Streptomyces sp. SHP 1-2 and related species for phylogenetic and taxonomic studies. The HIPS Symposium, Saarbrücken, Germany (2019). iii Acknowledgements Acknowledgements First and foremost I would like to express my deep gratitude to my mentor PD Dr.
    [Show full text]
  • Actinomycetes Isolated from Wetland and Hill Paddy During the Warm and Cool Seasons in Sarawak, East Malaysia
    ACTINOMYCETES ISOLATED FROM WETLAND AND HILL PADDY DURING THE WARM AND COOL SEASONS IN SARAWAK, EAST MALAYSIA Ann Anni Basik*, Holed Juboi, Sunita Sara Gill Shamsul, Jean-Jacques Sanglier and Tiong Chia Yeo Address(es): Ann Anni Basik 1 Sarawak Biodiversity Centre, Km. 20 Jalan Borneo Heights, Semengoh, 93250 Kuching, Sarawak, Malaysia. *Corresponding author: [email protected] doi: 10.15414/jmbfs.2020.9.4.774-780 ARTICLE INFO ABSTRACT Received 12. 3. 2018 As part of the Natural Product Discovery programme at Sarawak Biodiversity Centre (SBC), our study targeted isolation and evaluation Revised 4. 9. 2019 of actinomycetes diversity from paddy rice fields. Samples from two types of paddy farming system practiced in Sarawak, wet land and Accepted 11. 9. 2019 hill paddy, were collected and processed leading to the selection of 578 strains distributed among 24 genera and 10 families. Analysis Published 3. 2. 2020 using phylogenetic clustering indicated a total of 159 taxonomic units (TU). The taxonomic position and the ranking of the TU allowed their classification in 4 novel species, 61 putative novel species and 94 known species or species of uncertain position. The high genus diversity and percentage of novel or putative novel species demonstrate the biodiversity potential of Sarawak ecosystems, even in man- Regular article managed ecosystems. Keywords: paddy field, actinomycetes, ranking, taxonomic unit INTRODUCTION sequence identity (Gevers et al., 2005). However, species can be differentiated at a level of 98.2 – 99 % 16S rRNA similarity (Kim et al., 2014). Isolation of rare actinomycetes from paddy rice (Oryza sativa L.) field in the Apart from the commonly collected soil samples, rhizospheric soil and roots were Kuching Division, Sarawak were made to evaluate their diversity and also included for the isolation of actinomycetes in this project.
    [Show full text]
  • Systematic Research on Actinomycetes Selected According
    Systematic Research on Actinomycetes Selected according to Biological Activities Dissertation Submitted in fulfillment of the requirements for the award of the Doctor (Ph.D.) degree of the Math.-Nat. Fakultät of the Christian-Albrechts-Universität in Kiel By MSci. - Biol. Yi Jiang Leibniz-Institut für Meereswissenschaften, IFM-GEOMAR, Marine Mikrobiologie, Düsternbrooker Weg 20, D-24105 Kiel, Germany Supervised by Prof. Dr. Johannes F. Imhoff Kiel 2009 Referent: Prof. Dr. Johannes F. Imhoff Korreferent: ______________________ Tag der mündlichen Prüfung: Kiel, ____________ Zum Druck genehmigt: Kiel, _____________ Summary Content Chapter 1 Introduction 1 Chapter 2 Habitats, Isolation and Identification 24 Chapter 3 Streptomyces hainanensis sp. nov., a new member of the genus Streptomyces 38 Chapter 4 Actinomycetospora chiangmaiensis gen. nov., sp. nov., a new member of the family Pseudonocardiaceae 52 Chapter 5 A new member of the family Micromonosporaceae, Planosporangium flavogriseum gen nov., sp. nov. 67 Chapter 6 Promicromonospora flava sp. nov., isolated from sediment of the Baltic Sea 87 Chapter 7 Discussion 99 Appendix a Resume, Publication list and Patent 115 Appendix b Medium list 122 Appendix c Abbreviations 126 Appendix d Poster (2007 VAAM, Germany) 127 Appendix e List of research strains 128 Acknowledgements 134 Erklärung 136 Summary Actinomycetes (Actinobacteria) are the group of bacteria producing most of the bioactive metabolites. Approx. 100 out of 150 antibiotics used in human therapy and agriculture are produced by actinomycetes. Finding novel leader compounds from actinomycetes is still one of the promising approaches to develop new pharmaceuticals. The aim of this study was to find new species and genera of actinomycetes as the basis for the discovery of new leader compounds for pharmaceuticals.
    [Show full text]
  • Of Bergey's Manual
    BERGEY’S MANUAL® OF Systematic Bacteriology Second Edition Volume Five The Actinobacteria, Part A and B BERGEY’S MANUAL® OF Systematic Bacteriology Second Edition Volume Five The Actinobacteria, Part A and B Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig and William B. Whitman EDITORS, VOLUME FIVE William B. Whitman DIRECTOR OF THE EDITORIAL OFFICE Aidan C. Parte MANAGING EDITOR EDITORIAL BOARD Fred A. Rainey, Chairman, Peter Kämpfer, Vice Chairman, Paul De Vos, Jongsik Chun, Martha E. Trujillo and William B. Whitman WITH CONTRIBUTIONS FROM 116 COLLEAGUES William B. Whitman Bergey’s Manual Trust Department of Microbiology 527 Biological Sciences Building University of Georgia Athens, GA 30602-2605 USA ISBN 978-0-387-95043-3 ISBN 978-0-387-68233-4 (eBook) DOI 10.1007/978-0-387-68233-4 Springer New York Dordrecht Heidelberg London Library of Congress Control Number: 2012930836 © 2012, 1984–1989 Bergey’s Manual Trust Bergey’s Manual is a registered trademark of Bergey’s Manual Trust. All rights reserved. This work may not be translated or copied in whole or in part without the written permission of the publisher (Springer Science+Business Media, LLC, 233 Spring Street, New York, NY 10013, USA), except for brief excerpts in connection with reviews or scholarly analysis. Use in connection with any form of information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed is forbidden. The use in this publication of trade names, trademarks, service marks, and similar terms, even if they are not identified as such, is not to be taken as an expression of opinion as to whether or not they are subject to proprietary rights.
    [Show full text]
  • Systematic Bacteriology Second Edition
    BERGEY'S MANUAL OF Systematic Bacteriology Second Edition Volume Five The Actinobacteria, Part A Michael Goodfellow, Peter Kampfer, Hans-Jurgen Busse, Martha E.Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig and William B. Whitman EDITORS, VOLUME FIVE William B. Whitman • , DIRECTOR OF THE EDITORIAL OFFICE Aidan C. Parte MANAGING EDITOR -• EDITORIAL BOARD Fred A. Rainey, Chairman, Peter Kampfer, Vice Chairman, Paul DeVos, Jongsik Chun, Martha E.Trujillo and William B. Whitman WITH CONTRIBUTIONS FROM 116 COLLEAGUES bibiio'hfik Darmstadt Bibliothek Fiiologie ^ Springer Contents Preface to volume 5 ix Contributors xvii On using the Manual xxiii Part A Road map of the phylum Actinobacteria 1 Taxonomic outline of the phylum Actinobacteria 29 Phylum XXVI. Actinobacteria phyl. nov. 33 Class I. Actinobacteria 34 Order I. Actinomycetales 35 Family I. Actinomycetaceae 36 Genus I. Actinomyces 42 Genus II. Actinobaculum 109 Genus III. Arcanobacterium 114 Genus IV. Mobiluncus 126 Genus V. Varibaculum 139 Order II. Actinopolysporales ord. nov 162 Family I. Actinopolysporaceae 163 Genus I. Actinopolyspora 163 Order III. Bifidobacteriales 170 Family I. Bifidobacteriaceae 171 Genus I. Bifidobacterium 171 Genus II. Aeriscardovia ^-.._..J1_ 206 Genus III. Alloscardovia 207 Genus IV. Gardnerella .. .- 208 Genus V. Metascardovia 211 Genus VI. Parascardovia 213 Genus VII. Scardovja 214 Order IV. Catenulisporales ord. nov 225 Family I. Catenulisporaceae 226 Genus I. Catenulispora 226 Family II. Actinospicaceae 232 Genus I. Actinospica 232 Order V. Corynebacteriales ord. nov 235 Family I. Corynebacteriaceae 244 Genus I. Corynebacterium 245 Genus II. Turicella 289 Family II. Dietziaceae ."> 301 Genus I. Dietzia 301 Family III. Mycobacteriaceae 312 Genus I. Mycobacterium 312 xi xii CONTENTS Family IV.
    [Show full text]
  • Dactylosporangium and Some Other Filamentous Actinomycetes
    Biosystematics of the Genus Dactylosporangium and Some Other Filamentous Actinomycetes Byung-Yong Kim (BSc., MSc. Agricultural Chemistry, Korea University, Korea) Thesis submitted in accordance with the requirements of the Newcastle University for the Degree of Doctor of Philosophy November 2010 School of Biology, Faculty of Science, Agriculture and Engineering, Newcastle University, Newcastle upon Tyne, United Kingdom Dedicated to my mother who devoted her life to our family, and to my brother who led me into science "Whenever I found out anything remarkable, I have thought it my duty to put down my discovery on paper, so that all ingenious people might be informed thereof." - Antonie van Leeuwenhoek, Letter of June 12, 1716 “Freedom of thought is best promoted by the gradual illumination of men’s minds, which follows from the advance of science.”- Charles Darwin, Letter of October 13, 1880 ii Abstract This study tested the hypothesis that a relationship exists between taxonomic diversity and antibiotic resistance patterns of filamentous actinomycetes. To this end, 200 filamentous actinomycetes were selectively isolated from a hay meadow soil and assigned to groups based on pigments formed on oatmeal and peptone-yeast extract-iron agars. Forty-four representatives of the colour-groups were assigned to the genera Dactylosporangium, Micromonospora and Streptomyces based on complete 16S rRNA gene sequence analyses. In general, the position of these isolates in the phylogenetic trees correlated with corresponding antibiotic resistance patterns. A significant correlation was found between phylogenetic trees based on 16S rRNA gene and vanHAX gene cluster sequences of nine vancomycin-resistant Streptomyces isolates. These findings provide tangible evidence that antibiotic resistance patterns of filamentous actinomycetes contain information which can be used to design novel media for the selective isolation of rare and uncommon, commercially significant actinomycetes, such as those belonging to the genus Dactylosporangium, a member of the family Micromonosporaceae.
    [Show full text]
  • Sample Name Site Sample Date Coral Colony Condition Near Far Raw Reads Reads Used NCBI Biosample Accession # 10FTL Ft
    Table S1. Sample metadata for microbial communities collected from diseased and apparently healthy tissue associated with stony coral tissue loss disease. Condition DD indicates disease lesion, DH indicates apparently healthy tissue on diseased colonies (and is further parsed as near or far from the lesion), H indicates apparently healthy neighboring corals. Up to 3 samples were collected per coral colony, as indicated by the colony name. Raw reads (with adapters removed) are deposited in NCBI under Bioproject Accession # PRJNA521988. Sample name Site Sample date Coral Colony Condition Near_Far raw reads reads used NCBI Biosample Accession # 10FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav1 DD lesion 163206 97735 SAMN10964620 11FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav1 DH near 16564 11589 SAMN10964621 12FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav1 DH far 32531 7695 SAMN10964622 13FTL Ft. Lauderdale Dec-17 Orbicella faveolata ofav1 DH far 77087 31860 SAMN10964623 14FTL Ft. Lauderdale Dec-17 Orbicella faveolata ofav1 DH near 52715 8627 SAMN10964624 15FTL Ft. Lauderdale Dec-17 Orbicella faveolata ofav1 DD lesion 59267 3288 SAMN10964625 1FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav2 DD lesion 138377 26167 SAMN10964626 2FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav2 DH near 126210 43396 SAMN10964627 3FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav2 DH far 100050 19103 SAMN10964628 4FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav3 DD lesion 9678 3513 SAMN10964629 5FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav3 DH near 94544 15900 SAMN10964630 6FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav3 DH far 37793 13040 SAMN10964631 7FTL Ft. Lauderdale Dec-17 Montastraea cavernosa mcav4 DD lesion 122318 77995 SAMN10964632 8FTL Ft.
    [Show full text]
  • Genome-Based Taxonomic Classification of the Phylum
    ORIGINAL RESEARCH published: 22 August 2018 doi: 10.3389/fmicb.2018.02007 Genome-Based Taxonomic Classification of the Phylum Actinobacteria Imen Nouioui 1†, Lorena Carro 1†, Marina García-López 2†, Jan P. Meier-Kolthoff 2, Tanja Woyke 3, Nikos C. Kyrpides 3, Rüdiger Pukall 2, Hans-Peter Klenk 1, Michael Goodfellow 1 and Markus Göker 2* 1 School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom, 2 Department Edited by: of Microorganisms, Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures, Braunschweig, Martin G. Klotz, Germany, 3 Department of Energy, Joint Genome Institute, Walnut Creek, CA, United States Washington State University Tri-Cities, United States The application of phylogenetic taxonomic procedures led to improvements in the Reviewed by: Nicola Segata, classification of bacteria assigned to the phylum Actinobacteria but even so there remains University of Trento, Italy a need to further clarify relationships within a taxon that encompasses organisms of Antonio Ventosa, agricultural, biotechnological, clinical, and ecological importance. Classification of the Universidad de Sevilla, Spain David Moreira, morphologically diverse bacteria belonging to this large phylum based on a limited Centre National de la Recherche number of features has proved to be difficult, not least when taxonomic decisions Scientifique (CNRS), France rested heavily on interpretation of poorly resolved 16S rRNA gene trees. Here, draft *Correspondence: Markus Göker genome sequences
    [Show full text]
  • WO 2016/150855 Al 29 September 2016 (29.09.2016) P O P C T
    (12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2016/150855 Al 29 September 2016 (29.09.2016) P O P C T (51) International Patent Classification: DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, C12N 15/63 (2006.01) C12N 15/90 (2006.01) HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, (21) International Application Number: MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, PCT/EP2016/055967 PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, (22) International Filing Date: SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, 18 March 2016 (18.03.2016) TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. (25) Filing Language: English (84) Designated States (unless otherwise indicated, for every kind of regional protection available): ARIPO (BW, GH, (26) Publication Language: English GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, (30) Priority Data: TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, 15 160126.7 20 March 2015 (20.03.2015) EP TJ, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, DK, EE, ES, FI, FR, GB, GR, HR, HU, IE, IS, IT, LT, LU, (71) Applicant: DANMARKS TEKNISKE UNFVERSITET LV, MC, MK, MT, NL, NO, PL, PT, RO, RS, SE, SI, SK, [DK/DK]; Anker Engelunds Vej 1, Bygning 101A, 2800 SM, TR), OAPI (BF, BJ, CF, CG, CI, CM, GA, GN, GQ, Kgs.
    [Show full text]
  • Diversity and Some Bioactivities of Soil Actinomycetes from Southwestern
    bioRxiv preprint doi: https://doi.org/10.1101/692814; this version posted July 4, 2019. The copyright holder has placed this preprint (which was not certified by peer review) in the Public Domain. It is no longer restricted by copyright. Anyone can legally share, reuse, remix, or adapt this material for any purpose without crediting the original authors. 1 Diversity and some bioactivities of soil actinomycetes 2 from southwestern China 3 4 Yi Jiang*,Guiding Li, Qinyuan Li, Kun Zhang, 5 Longqian Jiang, Xiu Chen and Chenglin Jiang* 6 7 Yunnan Institute of Microbiology, Yunnan University, 8 Cuihu Road 2#, Kunming, Yunnan, China 9 10 11 12 13 *Corresponding authors: Yi Jiang, e-mail:[email protected]; Tel: +86-871-65034073 14 Chenglin Jiang, e-mail:[email protected]; Tel +86-871-65034139 15 16 17 bioRxiv preprint doi: https://doi.org/10.1101/692814; this version posted July 4, 2019. The copyright holder has placed this preprint (which was not certified by peer review) in the Public Domain. It is no longer restricted by copyright. Anyone can legally share, reuse, remix, or adapt this material for any purpose without crediting the original authors. 18 Abstract: With the natural medicine exploring, the actinomycetes (actinobacteria) have gotten 19 more and more recognition. 815 soil samples were collected from six areas in the southwestern 20 China. 7063 purified strains of actinomycetes were isolated from these samples by using four 21 media. The 16S rRNA gene sequences of 1998 selected strains of the 7063 were determined, and 22 the phylogenetic analysis was carried out.
    [Show full text]
  • Provided for Non-Commercial Research and Educational Use. Not for Reproduction, Distribution Or Commercial Use
    Provided for non-commercial research and educational use. Not for reproduction, distribution or commercial use. This article was originally published in the Encyclopedia of Microbiology published by Elsevier, and the attached copy is provided by Elsevier for the author’s benefit and for the benefit of the author’s institution, for non-commercial research and educational use including without limitation use in instruction at your institution, sending it to specific colleagues who you know, and providing a copy to your institution’s administrator. All other uses, reproduction and distribution, including without limitation commercial reprints, selling or licensing copies or access, or posting on open internet sites, your personal or institution’s website or repository, are prohibited. For exceptions, permission may be sought for such use through Elsevier’s permissions site at: http://www.elsevier.com/locate/permissionusematerial E M Wellington. Actinobacteria. Encyclopedia of Microbiology. (Moselio Schaechter, Editor), pp. 26-[44] Oxford: Elsevier. Author's personal copy BACTERIA Contents Actinobacteria Bacillus Subtilis Caulobacter Chlamydia Clostridia Corynebacteria (including diphtheria) Cyanobacteria Escherichia Coli Gram-Negative Cocci, Pathogenic Gram-Negative Opportunistic Anaerobes: Friends and Foes Haemophilus Influenzae Helicobacter Pylori Legionella, Bartonella, Haemophilus Listeria Monocytogenes Lyme Disease Mycoplasma and Spiroplasma Myxococcus Pseudomonas Rhizobia Spirochetes Staphylococcus Streptococcus Pneumoniae Streptomyces
    [Show full text]
  • Systematic Bacteriology Second Edition
    BERGEY’S MANUAL® OF Systematic Bacteriology Second Edition Volume Five The Actinobacteria, Part A and B BERGEY’S MANUAL® OF Systematic Bacteriology Second Edition Volume Five The Actinobacteria, Part A and B Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig and William B. Whitman EDITORS, VOLUME FIVE William B. Whitman DIRECTOR OF THE EDITORIAL OFFICE Aidan C. Parte MANAGING EDITOR EDITORIAL BOARD Fred A. Rainey, Chairman, Peter Kämpfer, Vice Chairman, Paul De Vos, Jongsik Chun, Martha E. Trujillo and William B. Whitman WITH CONTRIBUTIONS FROM 116 COLLEAGUES William B. Whitman Bergey’s Manual Trust Department of Microbiology 527 Biological Sciences Building University of Georgia Athens, GA 30602-2605 USA ISBN 978-0-387-95043-3 ISBN 978-0-387-68233-4 (eBook) DOI 10.1007/978-0-387-68233-4 Springer New York Dordrecht Heidelberg London Library of Congress Control Number: 2012930836 © 2012, 1984–1989 Bergey’s Manual Trust Bergey’s Manual is a registered trademark of Bergey’s Manual Trust. All rights reserved. This work may not be translated or copied in whole or in part without the written permission of the publisher (Springer Science+Business Media, LLC, 233 Spring Street, New York, NY 10013, USA), except for brief excerpts in connection with reviews or scholarly analysis. Use in connection with any form of information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed is forbidden. The use in this publication of trade names, trademarks, service marks, and similar terms, even if they are not identified as such, is not to be taken as an expression of opinion as to whether or not they are subject to proprietary rights.
    [Show full text]