Additional file 5

Table S1: Information on ISH probes

Gene Remarks Gene Name Forward primer Vector Restriction RNA symbol (Genbank accession Synonyms Reverse primer enzyme for polymerase number) AS probe for AS probe Arc (AF162777) activity regulated 5’-CGCAGCACCGACGACCAGAT-3’ p123T BamHI T7 cytoskeletal-associated 5’-GACCAGGGCAGACAGATGAG-3’ protein Arc3.1 c-fos EST clone FBJ osteosarcoma None pCMV-SPORT6 EcoRI T7 (BC029814) oncogene Fos, cFos c-jun EST clone Jun oncogene None pCMV-SPORT6 EcoRV T7 (BC094032) Jun, Junc Egr1 EST clone early growth response 1 None pCMV-SPORT6 EcoRI T7 (NM_007913) Egr-1, Krox-1, Krox-24, Zif268 Egr3 (NM_018781) early growth response 3 5’-CAATCTGTACCCCGAGGAGA-3’ p123T BamHI T7 Pilot 5’-CCACAGAACTCACAGGCAAA-3’ Fosb (NM_008036) FBJ osteosarcoma 5’-CGGTCTCGGGGAAATGCCCG-3’ pCR II EcoRV Sp6 oncogene B 5’-GCGAGTTCAGCGGGTCGGAC-3’ Jun-B EST clone Jun-B oncogene None pCMV-SPORT6 EcoRV T7 (BC003790) Nor1 A kind gift from Dr nuclear receptor See ref. pBluescript SK+ HindIII T3 Levesque, Université de subfamily 4, group A, Montréal member 3 Ref. J Pharmacol Exp Ther Nr4a3, NOR-1 313: 460-473, 2005. (NM_015743) Npas4 (NM_153553) neuronal PAS domain 5’-TCTCACTGTGCGCCAGCAGC-3’ pCR II BamHI T7 protein 4 5’-CCACGCCCTGAGCCAACTGG-3’ Nxf Nr4a1 (NM_010444) nuclear receptor 5’-GCGGAACCGCTGCCAGTTCT-3’ pCR II BamHI T7 subfamily 4, group A, 5’-GTTGGAGGCTCGCCCAGCTG-3’ member 1 NGFI-B, Nur77 Pde2 A kind gift from Dr. phosphodiesterase 2A, See ref. pcDNA3 HindIII Sp6 (Pde2a) Joseph Beavo, cGMP-stimulated University of Washington CGS-PDE; cGSPDE Ref. PNAS 94: 3388-3395, 1997 (NM_001008548) Th (NM_009377.1) tyrosine hydroxylase 5’-TGTCACGTCCCCAAGGTTCA-3’ p123T BamHI T7 5’-CCAAGAGCAGCCCATCAAAG-3’