Biosecurity Framework for the Australian Banana Industry March 2017
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BIOTROPIA Vol. 19 No. 1, 2012: 19 - 29 A SPECIES-SPECIFIC PCR ASSAY BASED ON THE INTERNAL TRANSCRIBED SPACER (ITS) REGIONS FOR IDENTIFICATION OF Mycosphaerella eumusae, M. fijiensis AND M. musicola ON BANANA IMAN HIDAYAT Microbiology Division, Research Center for Biology, Indonesian Institute of Sciences (LIPI), Cibinong 16911, West Java, Indonesia Recipient of BIOTROP Research Grant 2010/Accepted 28 June 2012 ABSTRACT A study on development of a rapid PCR-based detection method based on ITS region of M. eumusae, M. fijiensis , and M. musicola on banana was carried out. The main objecive of this study was to develop a fast and species-specific PCR-based detection method for the presence ofMycosphaerella species on banana. The methods include collection of specimens, morphological identification supported by molecular phylogenetic analysis, RFLP analysis, species-specific primers development, and validation. Two species ofMycosphaerella , namely, M. fijiensisand M. musicola , and one unidentified Pseudocercospora species were found in Java Island. Three restriction enzymes used in the RFLP analysis, viz, AluI, HaeIII, and TaqI were capable to discriminateM. eumusae , M. fijiensis , and M. musicola . Two species-specific primer pairs, viz, MfijF/MfijR and MmusF/MmusR have been successfully developed to detect the presence ofM. fijiensis and M. musicola , respectively. Key words: banana, detection, fungi,Mycosphaerella leaf spot, phytopathology INTRODUCTION Indonesia is one of banana production zones in Southeast Asia. However, crop losses from global climate change and fungal pathogens pose a serious threat not only to Indonesia, but also to global food security. Therefore, these threats should not be underestimated. Among the banana pathogens, three morphologically similar species, viz,Mycosphaerella fijiensis (black leaf streak disease/black Sigatoka), M. -
Final Report
Final Report Coordination of Banana Industry R&D (Panama TR4) Project leader: Jim Pekin Delivery partner: Australian Banana Growers’ Council Project code: BA14012 Hort Innovation – Final Report Project: Coordination of Banana Industry R&D (Panama TR4) – BA14012 Disclaimer: Horticulture Innovation Australia Limited (Hort Innovation) makes no representations and expressly disclaims all warranties (to the extent permitted by law) about the accuracy, completeness, or currency of information in this Final Report. Users of this Final Report should take independent action to confirm any information in this Final Report before relying on that information in any way. Reliance on any information provided by Hort Innovation is entirely at your own risk. Hort Innovation is not responsible for, and will not be liable for, any loss, damage, claim, expense, cost (including legal costs) or other liability arising in any way (including from Hort Innovation or any other person’s negligence or otherwise) from your use or non‐use of the Final Report or from reliance on information contained in the Final Report or that Hort Innovation provides to you by any other means. Funding statement: This project has been funded by Hort Innovation, using the banana research and development levy and contributions from the Australian Government. Hort Innovation is the grower‐owned, not‐for‐profit research and development corporation for Australian horticulture. Publishing details: ISBN 978 0 7341 4433 1 Published and distributed by: Hort Innovation Level 8 1 Chifley Square -
Sigatoka Diseases Control
1 /4 SIGATOKA DISEASES CONTROL Yellow and Black Sigatoka are banana leaf diseases caused by fungi. They cause significant drying of the leaf surface. The fungi spread in two ways: - by water which carries the conidia (asexual form CONTROL of reproduction) from the upper to the lower leaves S E and suckers, S Conidia - yellow and black Sigatoka - by wind which carries the ascospores (sexual form EA of reproduction) in all directions. S The control of Sigatoka(s) enables the plant to conserve a sufficient number of healthy leaves up to harvest to ensure the normal growth of the fruit. The disease reduces the leaf surface and causes disturbances in the functioning of the plant, leading to a reduction in yield and quality DI SIGATOKA (particularly a higher risk of fast ripening). 1. YELLOW SIGATOKA OR LEAF STREAK DISEASE 2. BLACK SIGATOKA OR BLACK LEAF STREAK DISEASE (Mycosphaerella musicola) (Mycosphaerella fijiensis): A MORE VIRULENT FUNGUS The development of the fungus occurs in five stages: Black Sigatoka is present in almost all tropical banana producing FOR YELLOW SIGATOKA zones but its arrival in the Lesser Antilles is very recent (2009- Stage 1: A tiny yellow spot or light green streak on the upper surface of 2010). leaves. > Hardly observable. YELLOW SIGATOKA BLACK SIGATOKA Upper surface Lower surface 2.1-Description of symptoms and differentiation with Yellow Stage 2: The spots stretch out Sigatoka into yellow streaks of 3-4mm; this is the optimal stage for treatment. The symptoms of Black Sigatoka are sometimes not distinguishable from those of Yellow Sigatoka, especially in > Streaks 1 to 5 mm. -
APPS Newsletter Vol 27, No. 3 December 2014 in This Edition
APPS Newsletter Vol 27, No. 3 December 2014 In this edition: Page 2. President’s message Page 3. News from the Business Manager Page 4. New members Page 4. Dates for your Diary Page 5. Regional news from New South Wales Page 8. Regional news from Victoria Page 10. Regional news from Tasmania Page 11. Report on the 8th Australasian Soilborne Diseases Symposium Page 15. Report on the 11th Australasian Plant Virology Workshop APPS NEWS is the official newsletter of the Australasian Plant Pathology Society, published electronically 3 times per year. Items for inclusion should be sent to: Dr Will Cuddy, Plant Breeding Institute, University of Sydney, Private Mail Bag 4011, Narellan, NSW, 2567. Ph. 02 9351 8871, Email: [email protected] Next deadline: March 31 2015 Web Site: http://www.australasianplantpathologysociety.org.au/ 1 APPS December 2014 Vol 27 No. 3 President’s Message 2014 seems to have gone by very quickly. The Management Committee is busy preparing for the upcoming Annual General Meeting, to be held on Thursday 11 December 2014. By the time you receive this newsletter, the AGM will be over, so I hope you were able to take up the invitation to join the meeting and contribute to the running of our Society. Progress towards the goals outlined in the 2-year plan has been documented in the President’s report prepared for the AGM (see http://www.appsnet.org/members/General/AGM%202014/index.aspx). When you next visit the APPS website I hope you will appreciate the improvements implemented by the Business Manager, Peter Williamson, to make the website more user-friendly. -
Characterisation and Management of Fusarium Wilt of Watermelon
Characterisation and management of Fusarium wilt of watermelon Dr Lucy Tran-Nguyen Northern Territory Department of Primary Industry and Fisheries Project Number: VM12001 Authors: Lucy Tran-Nguyen Cassie McMaster 1 VM12001 Horticulture Innovation Australia Limited (HIA Ltd) and the Northern Territory Department of Primary Industry and Fisheries make no representations and expressly disclaim all warranties (to the extent permitted by law) about the accuracy, completeness, or currency of information in this Final Report. Users of this Final Report should take independent action to confirm any information in this Final Report before relying on that information in any way. Reliance on any information provided by HIA Ltd is entirely at your own risk. HIA Ltd is not responsible for, and will not be liable for, any loss, damage, claim, expense, cost (including legal costs) or other liability arising in any way (including from HIA Ltd or any other person’s negligence or otherwise) from your use or non-use of the Final Report or from reliance on information contained in the Final Report or that HIA Ltd provides to you by any other means. R&D projects: co-investment funding This project has been funded by Horticulture Innovation Australia Limited with co-investment from Monsanto Australia and Rijk Zwaan Australia Pty. Ltd and funds from the Australian Government. ISBN 978 0 7341 4359 4 Published and distributed by: Horticulture Innovation Australia Ltd Level 8 1 Chifley Square Sydney NSW 2000 Telephone: (02) 8295 2300 Fax: (02) 8295 2399 © Copyright -
Diagnosis of Mycosphaerella Spp., Responsible for Mycosphaerella Leaf Spot Diseases of Bananas and Plantains, Through Morphotaxonomic Observations
Banana protocol Diagnosis of Mycosphaerella spp., responsible for Mycosphaerella leaf spot diseases of bananas and plantains, through morphotaxonomic observations Marie-Françoise ZAPATER1, Catherine ABADIE2*, Luc PIGNOLET1, Jean CARLIER1, Xavier MOURICHON1 1 CIRAD-Bios, UMR BGPI, Diagnosis of Mycosphaerella spp., responsible for Mycosphaerella leaf spot TA A 54 / K, diseases of bananas and plantains, through morphotaxonomic observations. 34398, Montpellier Cedex 5, Abstract –– Introduction. This protocol aims to diagnose under laboratory conditions the France main Mycosphaerella spp. pathogens of bananas and plantains. The three pathogens Mycos- [email protected] phaerella fijiensis (anamorph Paracercospora fijiensis), M. musicola (anamorph Pseudocer- cospora musae) and M. eumusae (anamorph Pseudocercospora eumusae) are, respectively, 2 CIRAD-Bios, UPR Mult. Vég., Stn. Neufchâteau, 97130, the causal agents of Black Leaf Streak disease, Sigatoka disease and Eumusae Leaf Spot Capesterre Belle-Eau, disease. The principle, key advantages, starting plant material and time required for the Guadeloupe, France method are presented. Materials and methods. The laboratory materials required and details of the thirteen steps of the protocols (tissue clearing and in situ microscopic observa- [email protected] tions, isolation on artificial medium and cloning of single-spore isolate, in vitro sporulation and microscopic observations of conidia, and long-term storage of isolates) are described. Results. Diagnosis is based on the observations of anamorphs (conidiophores and conidia) which can be observed directly from banana leaves or after sporulation of cultivated isolates if sporulating lesions are not present on banana samples. France / Musa sp. / Mycosphaerella fijiensis / Mycosphaerella musicola / Mycosphaerella eumusae / foliar diagnosis / microscopy Identification des espèces de Mycosphaerella responsables des cercosprio- ses des bananiers et plantains, par des observations morphotaxonomiques. -
Lecture 03 - Diseases of Banana (2 Lectures)
Lecture 03 - Diseases of Banana (2 Lectures) Panama disease :Fusarium oxysporum f. spcubense Economic Importance The first major disease which attacked banana was called Panama disease from the area where it first became serious. Banana wilt is a soil-borne fungal disease and gets entry in the plant body through roots and wounds caused by nematodes. It is most serious in poorly drained soil. Disease spreads through infected suckers. Symptoms Yellowing of the lower most leaves starting from margin to midrib of the leaves. Yellowing extends upwards and finally heart leaf alone remains green for some time and it is also affected. The leaves break near the base and hang down around pseudostem. Longitudinal splitting of pseudostem. Discolouration of vascular vessels as red or brown streaks. The fungus spreads through use of infected rhizomes Continuous cultivation results in build up of inoculum. Pathogen Mycelium is septate, hyaline and branched. Fungus produces micro, macro conidia and also chlamydospores. Micro conidia - Single celled or rarely one septate hyaline elliptical or oval. Macro conidia - Sickle shaped hyaline, 3-5 septate and tapering at both ends. Chalamydospores - Thick walled, spherical to oval, hyaline to slightly yellowish in colour. Mode of spread and survival The pathogen is soil borne. It survives in soil as chlamydospores for longer periods. The primary spread of the disease is through infected rhizomes and secondary spread is through irrigation water. Continuous cultivation results in build up of inoculum. Management Avoid growing of susceptible cultivars viz., Rasthali, Monthan, Red banana and Virupakshi. Grow resistant cultivar Poovan. Since nematode predispose the disease pairing and prolinage wit Carbofuran granules. -
Mycosphaerella Spp Causing Leafspot Disease on Bananas Advanced Methods Supplement
MYCOSPHAERELLA SPP CAUSING LEAFSPOT DISEASE ON BANANAS ADVANCED METHODS SUPPLEMENT MYCOSPHAERELLA SPP. CAUSING LEAFSPOT DISEASE ON BANANAS ADVANCED METHODS SUPPLEMENT Edited by J. Henderson (UQ/DPI&F Tree Pathology Centre ) K. Grice (Centre for Tropical Agriculture, DPI&F) Oc to ber 2008 1 MYCOSPHAERELLA SPP CAUSING LEAFSPOT DISEASE ON BANANAS ADVANCED METHODS SUPPLEMENT MYCOSPHAERELLA SPP. CAUSING LEAFSPOT DISEASE ON BANANAS ADVANCED METHODS SUPPLEMENT OCTOBER 2008 Contributors Juliane Henderson (UQ/DPI&F) Kathy Grice (DPI&F) Marie‐Françoise Zapater (CIRAD) Françoise Careel (CIRAD) The PCR primers and reaction conditions described in Protocol 4 of this document are pending publication and thus must be held in confidence until such time they appear in the public domain. Please also ensure these parameters do not appear in material including conference oral presentations, poster and funding body reports. No part of this document, including images, may be reproduced without permission of the authors. 2 MYCOSPHAERELLA SPP CAUSING LEAFSPOT DISEASE ON BANANAS ADVANCED METHODS SUPPLEMENT INTRODUCTION .................................................................................................................... 5 1.0 IDENTIFICATION OF MYCOSPHAERELLA SPP. PATHOGENS ON BANANA (IN SITU) USING LIGHT MICROSCOPY..................................................................................... 8 1.1 AIM................................................................................................................................ 8 1.2 METHODOLOGY......................................................................................................... -
Australian Bananas Magazine
Australian BananasIssue 40, Summer 2013-2014 Hopeful harvest Trial blocks yield answers in the search for disease-resistant varieties Page 10 Banana Page 20 Page 22 China- Freckle eradication Retail campaign Philippines study tour editorial & advertising AUSTRALIAN Rhyll Cronin 07 3278 4786 [email protected] art direction & design ToadShow Bananas Summer 2013-2014 2 Eton Street,Toowong contents 07 3335 4000 www.toadshow.com.au publisher Regulars Australian Banana 4 Chairman’s comment Growers’ Council Inc. 5 CEO’s comment ABN: 60 381 740 734 20 Marketing – Campaign puts a smile on chief executive officer retailers’ faces Jim Pekin 38 Health – Is rating food a five-star idea? research and 39 Membership – ABGC Juliane development manager 25 PAGE Henderson Jay Anderson 12 Industry news & MeeHua Wong office manager Alix Perry 6 Regional round up administration assistant 7 Banana grower AGM discusses industry Industry development sustainability Kaylar Packer 16 Lessons from the Philippines 8 Have your say on draft industry plan BOARD OF DIRECTORS Warnings for growers from a look at TR4 in the Philippines chairman Plant health Doug Phillips 22 Tour highlights threats, opportunities 9 Committee guides our six million dollar A group studies production in China and vice-chairman plan the Philippines Adrian Crema 28 PAGE The six-member team guiding the Banana 39 Robert Mayers in reef-grants role treasurer Plant Protection Program (BPPP) ABGC’s new Reef Water Quality Grants Paul Johnston Officer directors Features Marc Darveniza 10 Taking -
Market Access of Papua New Guinea Bananas (Musa Spp.) with Particular Respect to Banana Fly (Bactrocera Musae (Tryon)) (Diptera: Tephritidae)
Market Access of Papua New Guinea Bananas (Musa spp.) with Particular Respect to Banana Fly (Bactrocera musae (Tryon)) (Diptera: Tephritidae) Amanda Mararuai B.Sc Agriculture, Graduate Diploma in Applied Science A thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy School of Natural Resource Sciences Queensland University of Technology Brisbane Australia April 2010 Keywords Bactrocera musae, banana fly, bananas, biosecurity, host availability, invasion biology, invasive, market access, Musa spp., novel environment, Papua New Guinea, pest risk analysis, population distribution ii Abstract International market access for fresh commodities is regulated by international accepted phytosanitary guidelines, the objectives of which are to reduce the biosecurity risk of plant pest and disease movement. Papua New Guinea (PNG) has identified banana as a potential export crop and to help meet international market access requirements, this thesis provides information for the development of a pest risk analysis (PRA) for PNG banana fruit. The PRA is a three step process which first identifies the pests associated with a particular commodity or pathway, then assesses the risk associated with those pests, and finally identifies risk management options for those pests if required. As the first step of the PRA process, I collated a definitive list on the organisms associated with the banana plant in PNG using formal literature, structured interviews with local experts, grey literature and unpublished file material held in PNG field research stations. I identified 112 organisms (invertebrates, vertebrate, pathogens and weeds) associated with banana in PNG, but only 14 of these were reported as commonly requiring management. For these 14 I present detailed information summaries on their known biology and pest impact. -
Phylogenetic Analysis of Cercospora and Mycosphaerella Based on the Internal Transcribed Spacer Region of Ribosomal DNA
Ecology and Population Biology Phylogenetic Analysis of Cercospora and Mycosphaerella Based on the Internal Transcribed Spacer Region of Ribosomal DNA Stephen B. Goodwin, Larry D. Dunkle, and Victoria L. Zismann Crop Production and Pest Control Research, U.S. Department of Agriculture-Agricultural Research Service, Department of Botany and Plant Pathology, 1155 Lilly Hall, Purdue University, West Lafayette, IN 47907. Current address of V. L. Zismann: The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850. Accepted for publication 26 March 2001. ABSTRACT Goodwin, S. B., Dunkle, L. D., and Zismann, V. L. 2001. Phylogenetic main Cercospora cluster. Only species within the Cercospora cluster analysis of Cercospora and Mycosphaerella based on the internal produced the toxin cercosporin, suggesting that the ability to produce this transcribed spacer region of ribosomal DNA. Phytopathology 91:648- compound had a single evolutionary origin. Intraspecific variation for 658. 25 taxa in the Mycosphaerella clade averaged 1.7 nucleotides (nts) in the ITS region. Thus, isolates with ITS sequences that differ by two or more Most of the 3,000 named species in the genus Cercospora have no nucleotides may be distinct species. ITS sequences of groups I and II of known sexual stage, although a Mycosphaerella teleomorph has been the gray leaf spot pathogen Cercospora zeae-maydis differed by 7 nts and identified for a few. Mycosphaerella is an extremely large and important clearly represent different species. There were 6.5 nt differences on genus of plant pathogens, with more than 1,800 named species and at average between the ITS sequences of the sorghum pathogen Cercospora least 43 associated anamorph genera. -
EFECTO DE LAS CONDICIONES DE INCUBACIÓN Y DE COMPUESTOS INORGÁNICOS Y ORGÁNICOS SOBRE LA ESPORULACIÓN DE LESIONES DE SIGATOKA NEGRA (Mycosphaerella Fijiensis)
EFECTO DE LAS CONDICIONES DE INCUBACIÓN Y DE COMPUESTOS INORGÁNICOS Y ORGÁNICOS SOBRE LA ESPORULACIÓN DE LESIONES DE SIGATOKA NEGRA (Mycosphaerella fijiensis) MAUREN LISETH GÓMEZ RUIZ Trabajo Final de Graduación presentado a la Escuela de Agronomía como requisito parcial para optar al grado de Licenciatura en Ingeniería en Agronomía INSTITUTO TECNOLÓGICO DE COSTA RICA SEDE REGIONAL SAN CARLOS 2013 EFECTO DE LAS CONDICIONES DE INCUBACIÓN Y DE COMPUESTOS INORGÁNICOS Y ORGÁNICOS SOBRE LA ESPORULACIÓN DE LESIONES DE SIGATOKA NEGRA (Mycosphaerella fijiensis) MAUREN LISETH GÓMEZ RUIZ Trabajo Final de Graduación presentado a la Escuela de Agronomía para obtener el grado Licenciatura en Ingeniería en Agronomía INSTITUTO TECNOLÓGICO DE COSTA RICA SEDE REGIONAL SAN CARLOS 2013 ii EFECTO DE LAS CONDICIONES DE INCUBACIÓN Y DE COMPUESTOS INORGÁNICOS Y ORGÁNICOS SOBRE LA ESPORULACIÓN DE LESIONES DE SIGATOKA NEGRA (Mycosphaerella fijiensis) MAUREN LISETH GÓMEZ RUIZ Aprobado por los miembros del Tribunal Evaluador: ___________________ Ing. Agr. Mauricio Guzmán, M. Sc. Asesor Externo ___________________ Ing. Agr. Carlos Muñoz Ruiz, Ph.D. Asesor Interno ___________________ Ing. Agr. Joaquín Durán Mora, M. Sc. Jurado ___________________ Ing. Agr. Fernando Gómez Sánchez, MAE. Coordinador Trabajos Finales de Graduación ___________________ Ing. Agr. Luis Alberto Camero Rey. M. Sc. Director Escuela Agronomía 2013 iii DEDICATORIA A mis padres, José Ángel Gómez Artavia y Odalia Ruiz Hernández. A mis hermanos, Antony Ortiz Jarquín, Gabriel Gómez Ruiz y Darío Gómez Ruiz. Porque por ellos busco mejorar día a día, porque mis logros son sus logros. A toda aquella persona con la capacidad de enseñar, que lo hace con gusto, que son maestros en espíritu y en corazón.