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Australian Endangered Orchid, Microtis Angusii: an Evaluation of the Utility of Dna Barcoding
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica FLANAGAN, NICOLA S.; PEAKALL, ROD; CLEMENTS, MARK A.; OTERO, J. TUPAC MOLECULAR GENETIC DIAGNOSIS OF THE ‘TAXONOMICALLY DIFFICULT’ AUSTRALIAN ENDANGERED ORCHID, MICROTIS ANGUSII: AN EVALUATION OF THE UTILITY OF DNA BARCODING. Lankesteriana International Journal on Orchidology, vol. 7, núm. 1-2, marzo, 2007, pp. 196-198 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44339813040 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 7(1-2): 196-198. 2007. MOLECULAR GENETIC DIAGNOSIS OF THE ‘TAXONOMICALLY DIFFICULT’ AUSTRALIAN ENDANGERED ORCHID, MICROTIS ANGUSII: AN EVALUATION OF THE UTILITY OF DNA BARCODING. 1,3,5 1 2 2, 4 NICOLA S. FLANAGAN , ROD PEAKALL , MARK A. CLEMENTS & J. TUPAC OTERO 1 School of Botany and Zoology, The Australian National University, Canberra, ACT 0200, Australia. 2 Centre for Plant Biodiversity Research, GPO Box 1600 Canberra ACT 2601, Australia. 3 Genetics & Biotechnology, University College Cork, Ireland 4 Dept. de Ciencias Agricolas, Universidad Nacional de Colombia, Palmira, Valle, Colombia 5 Author for correspondence: [email protected] KEY WORDS: Species diagnosis, barcoding, practical outcomes, clonality, Internal Transcribed Sequences (ITS), Single Nucleotide Polymorphisms (SNPs) As species are the common currency for conserva- to the endangered Australian orchid, Microtis angusii tion efforts, their accurate description is essential for (Flanagan et al. -
Phylogenetic Relationships of Discyphus Scopulariae
Phytotaxa 173 (2): 127–139 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2014 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.173.2.3 Phylogenetic relationships of Discyphus scopulariae (Orchidaceae, Cranichideae) inferred from plastid and nuclear DNA sequences: evidence supporting recognition of a new subtribe, Discyphinae GERARDO A. SALAZAR1, CÁSSIO VAN DEN BERG2 & ALEX POPOVKIN3 1Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, Apartado Postal 70-367, 04510 México, Distrito Federal, México; E-mail: [email protected] 2Universidade Estadual de Feira de Santana, Departamento de Ciências Biológicas, Av. Transnordestina s.n., 44036-900, Feira de Santana, Bahia, Brazil 3Fazenda Rio do Negro, Entre Rios, Bahia, Brazil Abstract The monospecific genus Discyphus, previously considered a member of Spiranthinae (Orchidoideae: Cranichideae), displays both vegetative and floral morphological peculiarities that are out of place in that subtribe. These include a single, sessile, cordate leaf that clasps the base of the inflorescence and lies flat on the substrate, petals that are long-decurrent on the column, labellum margins free from sides of the column and a column provided with two separate, cup-shaped stigmatic areas. Because of its morphological uniqueness, the phylogenetic relationships of Discyphus have been considered obscure. In this study, we analyse nucleotide sequences of plastid and nuclear DNA under maximum parsimony -
ACT, Australian Capital Territory
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
Australian Orchidaceae: Genera and Species (12/1/2004)
AUSTRALIAN ORCHID NAME INDEX (21/1/2008) by Mark A. Clements Centre for Plant Biodiversity Research/Australian National Herbarium GPO Box 1600 Canberra ACT 2601 Australia Corresponding author: [email protected] INTRODUCTION The Australian Orchid Name Index (AONI) provides the currently accepted scientific names, together with their synonyms, of all Australian orchids including those in external territories. The appropriate scientific name for each orchid taxon is based on data published in the scientific or historical literature, and/or from study of the relevant type specimens or illustrations and study of taxa as herbarium specimens, in the field or in the living state. Structure of the index: Genera and species are listed alphabetically. Accepted names for taxa are in bold, followed by the author(s), place and date of publication, details of the type(s), including where it is held and assessment of its status. The institution(s) where type specimen(s) are housed are recorded using the international codes for Herbaria (Appendix 1) as listed in Holmgren et al’s Index Herbariorum (1981) continuously updated, see [http://sciweb.nybg.org/science2/IndexHerbariorum.asp]. Citation of authors follows Brummit & Powell (1992) Authors of Plant Names; for book abbreviations, the standard is Taxonomic Literature, 2nd edn. (Stafleu & Cowan 1976-88; supplements, 1992-2000); and periodicals are abbreviated according to B-P- H/S (Bridson, 1992) [http://www.ipni.org/index.html]. Synonyms are provided with relevant information on place of publication and details of the type(s). They are indented and listed in chronological order under the accepted taxon name. Synonyms are also cross-referenced under genus. -
Friends of Pallisters Reserve Inc
FRIENDS OF PALLISTERS RESERVE INC. FLORA OF PALLISTERS RESERVE PTERIDOPHYTA Lepidosperma laterale var. majus Adiantaceae Variable Sword-sedge Adiantum aethiopicum - Common Maidenhair Lepidosperma longitudinale - Pithy Sword-sedge Schoenus apogon - Common Bog-rush Azollaceae Azolla filiculoides - Pacific Azolla Hypoxidaceae Hypoxis glabella—Tiny Star Dennstaedtiaceae Hypoxis vaginata - Yellow Star Pteridium esculentum - Austral Bracken Juncaceae Lindsaeceae Isolepis marginata - Little Club-sedge Lindsaea linearis - Screw Fern * Juncus articulatus - Jointed rush Juncus bufonius - Toad Rush GYMNOSPERMS * Juncus bulbosus - Rush Pinaceae *Juncus capitatus - Capitate Rush *Pinus radiata - Monterey Pine Juncus holoschoenus - Joint-leaf Rush MONOCOTYLEDONAE Juncus ingens - Giant Rush Centrolepidaceae Juncus pallidus - Pale Rush Aphelia gracilis - Slender Aphelia Juncus planifolius - Broad-leaf rush Aphelia pumilio - Dwarf Aphelia Juncus procerus - Rush Centrolepis aristata - Pointed Centrolepis Juncus subsecundus - Finger rush Centrolepis strigosa -Hairy Centrolepis Luzula meridionalis - Field Woodrush Convolvulaceae Juncaginaceae Dichondra repens - Kidney Weed Triglochin procera sens.lat. - Water Ribbons Cyperaceae Lemnaceae Baumea articulata - Jointed Twig-rush Lemma disperma - Duckweed Baumea rubiginosa - Soft Twig-rush Lemma trisulca - Ivy-leaf Duckweed Carex appressa - Tall Sedge Wolffia australiana - Tiny Duckweed Carex breviculmis - Common Sedge Liliaceae *Cyperus tenellus - Tiny Sedge Arthropodium strictum - Chocolate Lily Eleocharis -
The 1770 Landscape of Botany Bay, the Plants Collected by Banks and Solander and Rehabilitation of Natural Vegetation at Kurnell
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Hochschulschriftenserver - Universität Frankfurt am Main Backdrop to encounter: the 1770 landscape of Botany Bay, the plants collected by Banks and Solander and rehabilitation of natural vegetation at Kurnell Doug Benson1 and Georgina Eldershaw2 1Botanic Gardens Trust, Mrs Macquaries Rd Sydney 2000 AUSTRALIA email [email protected] 2Parks & Wildlife Division, Dept of Environment and Conservation (NSW), PO Box 375 Kurnell NSW 2231 AUSTRALIA email [email protected] Abstract: The first scientific observations on the flora of eastern Australia were made at Botany Bay in April–May 1770. We discuss the landscapes of Botany Bay and particularly of the historic landing place at Kurnell (lat 34˚ 00’ S, long 151˚ 13’ E) (about 16 km south of central Sydney), as described in the journals of Lieutenant James Cook and Joseph Banks on the Endeavour voyage in 1770. We list 132 plant species that were collected at Botany Bay by Banks and Daniel Solander, the first scientific collections of Australian flora. The list is based on a critical assessment of unpublished lists compiled by authors who had access to the collection of the British Museum (now Natural History Museum), together with species from material at National Herbarium of New South Wales that has not been previously available. The list includes Bidens pilosa which has been previously regarded as an introduced species. In 1770 the Europeans set foot on Aboriginal land of the Dharawal people. Since that time the landscape has been altered in response to a succession of different land-uses; farming and grazing, commemorative tree planting, parkland planting, and pleasure ground and tourist visitation. -
The Genus Microtis R. Br. (Orchidaceae): a Taxonomic Revision with Notes on Biology
J. Adelaide Bot. Gard. 7(1): 45-89 (1984) THE GENUS MICROTIS R. BR. (ORCHIDACEAE): A TAXONOMIC REVISION WITH NOTES ON BIOLOGY R. Bates 38 Portmamock Street, Fairview Park, South Australia 5126 Abstract A taxonomic revision of Micro lis is presented in which nine species are recognised; M. globula is described as new. M. brownii, M. magnadenia and M. truncata are placed in synonymy with M. rara. M. media is treatéd as a synonym of M. unifolia. The biology, taxonomic affinities and distribution are considered for each species, a key is provided and a detailed description of each species is supplemented with illustrations. Introduction Since Robert Brown (1810) described Microtis there have been numerous taxa added but no complete revision has appeared, nor has any flora dealt with all species. Bentham (1873, p. 269) when discussing the difficulty of determining many Australian orchids, including Microtis, from dried material wrote, "It is to be hoped that the revision of these ... vvill be taken on byresident botanists who have the opportunity of studying them in the fresh state". With this in mind the present author has observed, photographed and collected all species of Microtis in the process of completing this revision. Plants were obtained from as many locations as possible and cultivated in Adelaide and populations of all Australian species studied in the field. Endophytic soil fungi on Microtis were isolated and identified by Dr J. Warcup (Waite Agricultural Research Institute). Chromosome counts were attempted but results were inconclusive. Loans were obtained from numerous herbaria (see acknowledgements). Types of all taxa were examined unless otherwise indicated in the text. -
On the Flora of Australia
L'IBRARY'OF THE GRAY HERBARIUM HARVARD UNIVERSITY. BOUGHT. THE FLORA OF AUSTRALIA, ITS ORIGIN, AFFINITIES, AND DISTRIBUTION; BEING AN TO THE FLORA OF TASMANIA. BY JOSEPH DALTON HOOKER, M.D., F.R.S., L.S., & G.S.; LATE BOTANIST TO THE ANTARCTIC EXPEDITION. LONDON : LOVELL REEVE, HENRIETTA STREET, COVENT GARDEN. r^/f'ORElGN&ENGLISH' <^ . 1859. i^\BOOKSELLERS^.- PR 2G 1.912 Gray Herbarium Harvard University ON THE FLORA OF AUSTRALIA ITS ORIGIN, AFFINITIES, AND DISTRIBUTION. I I / ON THE FLORA OF AUSTRALIA, ITS ORIGIN, AFFINITIES, AND DISTRIBUTION; BEIKG AN TO THE FLORA OF TASMANIA. BY JOSEPH DALTON HOOKER, M.D., F.R.S., L.S., & G.S.; LATE BOTANIST TO THE ANTARCTIC EXPEDITION. Reprinted from the JJotany of the Antarctic Expedition, Part III., Flora of Tasmania, Vol. I. LONDON : LOVELL REEVE, HENRIETTA STREET, COVENT GARDEN. 1859. PRINTED BY JOHN EDWARD TAYLOR, LITTLE QUEEN STREET, LINCOLN'S INN FIELDS. CONTENTS OF THE INTRODUCTORY ESSAY. § i. Preliminary Remarks. PAGE Sources of Information, published and unpublished, materials, collections, etc i Object of arranging them to discuss the Origin, Peculiarities, and Distribution of the Vegetation of Australia, and to regard them in relation to the views of Darwin and others, on the Creation of Species .... iii^ § 2. On the General Phenomena of Variation in the Vegetable Kingdom. All plants more or less variable ; rate, extent, and nature of variability ; differences of amount and degree in different natural groups of plants v Parallelism of features of variability in different groups of individuals (varieties, species, genera, etc.), and in wild and cultivated plants vii Variation a centrifugal force ; the tendency in the progeny of varieties being to depart further from their original types, not to revert to them viii Effects of cross-impregnation and hybridization ultimately favourable to permanence of specific character x Darwin's Theory of Natural Selection ; — its effects on variable organisms under varying conditions is to give a temporary stability to races, species, genera, etc xi § 3. -
Lower Fitzroy River Infrastructure Project Draft Environmental Impact Statement
Not government policy Commercial in confidence Appendix 1. Vascular plant species recorded from the Lower Dawson River study area. Nomenclature according to Henderson (2002). ACANTHACEAE ARECACEAE Brunoniella australis Livistona decipiens Cabbage palm Dipteracanthus australasicus subsp. australasicus Pseuderanthemum variabile Love Flower ASCLEPIADACEAE *Asclepias curassavica Redhead cottonbush ADIANTACEAE *Cryptostegia grandiflora Rubbervine Cheilanthes sieberi Rock Fern *Gomphocarpus physocarpus Balloonbush Marsdenia viridiflora AIZOACEAE Sarcostemma viminale subsp brunonianum Caustic vine Tetragonia tetragonioides box burr Zaleya galericulata subsp. galericulata ASTERACEAE *Ageratum houstonianum Blue billygoat weed AMARANTHACEAE Bracteantha bracteata Achyranthes aspera Chaff flower *Bidens pilosa Coblers peg Alternanthera denticulata Lesser joyweed Calotis cuneata Blue burr daisy Alternanthera nana Hairy joyweed Cassinia laevis Coughbush Alternanthera nodiflora Centipeda minima var. minima Amaranthus interruptus Chrysocephalum apiculatum Yellow buttons Amaranthus viridus Green amaranth *Cirsium vulgare Spear thistle *Gomphrena celosioides Gomphrena *Conyza canadiensis Fleabane Nyssanthes diffusa Barb wire weed Cyanthillium cinereum Veronia *Emilia sonchifolia Emilia AMARYLLIDACEAE *Lactuca serriola Prickly lettuce Crinum flaccidum Murray lily Olearia sp *Parthenium hysterophorus Parthenium ANACARDIACEAE Pluchea dioscoridis Pleiogynium timorense Burdekin plum Pterocaulon redolens Toothed ragwort Pterocaulon serrulatum *Senecio lautus -
Biodiversity and Conservation Science Annual Report 2019-2020
Biodiversity and Conservation Science Annual Report 2019-2020 Acknowledgements This report was prepared by the Department of Biodiversity, Conservation and Attractions (DBCA). For more information contact: Executive Director, Biodiversity and Conservation Science Department of Biodiversity, Conservation and Attractions 17 Dick Perry Avenue Kensington Western Australia 6151 Locked Bag 104 Bentley Delivery Centre Western Australia 6983 Telephone (08) 9219 9943 dbca.wa.gov.au The recommended reference for this publication is: Department of Biodiversity, Conservation and Attractions, 2020, Biodiversity and Conservation Science Annual Report 2019-20, Department of Biodiversity, Conservation and Attractions, Perth. Images Front cover main photo: Mt Trio, Stirling Range National Park. Photo – Damien Rathbone Front cover top photos left to right: Swan Canning Riverpark. Photo – Kerry Trayler/DBCA Mollerin Rock reserve. Photo – Val English/DBCA Shark Bay bandicoot. Photo – Saul Cowen/DBCA Shark Bay seagrass. Photo – Luke Skinner/DBCA Back cover top photos left to right: Post fire monitoring. Photo – Lachie McCaw/DBCA Kalbarri yellow bells. Photo – Kelly Shepherd/DBCA Western grasswren. Photo – Saul Cowen/DBCA Dragon Rocks Kunzea. Photo – Kelly Shepherd/DBCA Department of Biodiversity, Conservation and Attractions Biodiversity and Conservation Science Annual Report 2019–2020 Director’s Message I am pleased to present our Biodiversity and Conservation Science report for 2019-20 as we continue to deliver on the government’s commitment to build and share biodiversity knowledge for Western Australia. Our Science Strategic Plan and Program Plans articulate how our work contributes to delivery of the biodiversity science priorities for the State as the knowledge generated by our science is essential to ensure we conserve and value add to the unique biodiversity we have around us. -
Farming and Protecting the Critically Endangered Iron-Grass Natural
October 2011 FARMING AND PROTECTING THE CRITICALLY ENDANGERED IRON-GRASS NATURAL TEMPERATE GRASSLAND Since European settlement, most of the Iron-grass Natural Temperate Grassland of South Australia has been cleared, or degraded by pasture improvement and, in some circumstances, grazing. The small amount of natural temperate grassland of this type remaining in good condition is now protected under Australia’s national environment law—the Environment Protection and Biodiversity Conservation Act 1999 (EPBC Act). What does national protection of Iron-grass Natural Temperate Grassland mean for farmers/ graziers? National environment law protects Australia’s unique plants and animals without stopping farm business. In many cases, your supportive farming practices have helped retain remnant native grasslands. You may need Australian Government approval if: • the protected iron-grass grassland (or other protected matters) occur on your property, and • a new, intensified or changed activity could have a significant impact on the ecological community. If you are not sure whether your activity requires Australian Government approval, you can get free advice from the environment liaison officer at the National Farmers’ Federation on 1800 704 520 (or email [email protected]). What and where is Iron-grass Natural Temperate Grassland? Iron-grass Natural Temperate Grassland mainly occurs on the slopes and hills of the Mount Lofty Ranges, west of the River Murray and throughout the mid north. Patches also occur on the eastern side of the River Murray near Tailem Bend, and may occur along the Hummocks Range north of the Gulf Saint Vincent. environment.gov.au This indicative map shows the outer boundary of the area in which the ecological community may occur. -
Biodiversity Summary: Wimmera, Victoria
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations.