Nuclear Envelope in Nuclear Positioning and Cell Migration
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Atnea1-Identification and Characterization of a Novel Plant Nuclear Envelope Associated Protein
Vol. 13(7), pp. 844-856, 12 February, 2014 DOI: 10.5897/AJB2013.13078 ISSN 1684-5315 ©2014 Academic Journals African Journal of Biotechnology http://www.academicjournals.org/AJB Full Length Research Paper AtNEA1-identification and characterization of a novel plant nuclear envelope associated protein Ting Lu Department of Biological and Medical Sciences, Oxford Brookes University, Oxford OX3 0BP, UK. Accepted 29 January, 2014 In animal and yeast cells, a cross nuclear envelope structure linker of nucleoskeleton and cytoskeleton (LINC) is formed by outer nuclear membrane SUN proteins and inner nuclear membrane KASH proteins. However, little information was acquired about plant SUN-KASH structure until they were found in plant SUN proteins in 2010 and KASH proteins in 2012. The SUN-KASH complex alongside with actin in the microfilament cytoskeleton and nucleaoskeleton together shape the main cell skeleton structure and involve in many important biological functions including cell structure stability, cell movement and cell division. In searching of other plant nuclear envelope associated proteins, arabidopsis nuclear envelop associated (AtNEA1) protein 1, a plant nucleoplasmic protein, was identified from biological studies. AtNEA1 was predicted to have a nuclear localisation signal (NLS), two coiled coil domains and one transmembrane (TM) domain. The mutants with the deletion of respective putative domains were observed under confocal microscopy. The subcellular localisation of mutants implied that putative NLS is not essential for AtNEA1 to diffuse through NPC but can strongly increase the efficiency, both coiled coil domains participate in the interaction of AtNEA1 with its unknown INM intrinsic interaction partner, and putative TM appeared to be non-functional. -
Kashing up with the Nucleus: Novel Functional Roles of KASH
This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/authorsrights Author's personal copy Available online at www.sciencedirect.com ScienceDirect KASHing up with the nucleus: novel functional roles of KASH proteins at the cytoplasmic surface of the nucleus 1 2 GW Gant Luxton and Daniel A Starr Nuclear–cytoskeletal connections are central to fundamental reviewed [8–11]. There are many excellent comprehensive cellular processes, including nuclear positioning and reviews on KASH and SUN proteins [1,3–5]. Here we focus chromosome movements in meiosis. The cytoskeleton is on recent developments on the diverse array of functions coupled to the nucleoskeleton through conserved KASH–SUN that KASH proteins play at the cytoplasmic surface of the bridges, or LINC complexes, that span the nuclear envelope. nucleus (Figure 1). KASH proteins function in transmitting KASH proteins localize to the outer nuclear membrane where mechanical forces from the cytoplasm to the nucleus. they connect the nucleus to the cytoskeleton. New findings During meiosis, KASH proteins transmit forces generated have expanded the functional diversity of KASH proteins, in the cytoplasm that move telomeres inside the nucleus showing that they interact with microtubule motors, actin, [12]. -
Unique PKD Like Protein Kinase in Entamoeba Histolytica Regulates Vital Actin Mediated 2 Processes 3 4 Mithu Baidya, Santoshi Nayak, Amit K
bioRxiv preprint doi: https://doi.org/10.1101/677500; this version posted June 20, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Unique PKD like protein kinase in Entamoeba histolytica regulates vital actin mediated 2 processes 3 4 Mithu Baidya, Santoshi Nayak, Amit K. Das, Sudip Kumar Ghosh# 5 6 Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 7 721 302, India. 8 #Address Correspondence to Sudip K. Ghosh, [email protected] 9 Telephone no: (+91) 3222 283768 Fax: (+91) 3222 278707 10 11 12 Abstract 13 Entamoeba histolytica causes widespread amoebiasis in humans. Multiple lines of emerging 14 evidence have identified a repertoire of proteins involved in the process of erythrophagocytosis. 15 However, the early initiation of the erythrophagosome at the site of erythrocyte's attachment is 16 not well understood. Here in our study we have identified and characterized a small Protein kinase 17 D like protein (EhPKDL) in Eh, which nucleates actin polymerization and thus mediates many vital 18 processes in Eh including erythrophagocytosis. Following multiple biochemical and biophysical 19 approaches, we have characterized EhPKDL and have shown that EhPKDL can indeed interact and 20 prime the nucleation of monomeric actin for polymerization. Furthermore, we went on to 21 demonstrate the vitality of the EhPKDL in major actin-mediated processes like capping, motility, 22 and erythrophagocytosis following knockdown of EhPKDL in the cellular context. Our study thus 23 provides novel insights into the early actin nucleation in Eh and thus bridges the gap with our 24 previous understanding of the assembly of erythrophagosomes. -
Identification of Plant SUN Domain-Interacting Tail Proteins and Analysis of Their Function in Nuclear Positioning
Identification of Plant SUN Domain-Interacting Tail Proteins and Analysis of Their Function in Nuclear Positioning DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Xiao Zhou, M. S. Graduate Program in Plant Cellular and Molecular Biology The Ohio State University 2013 Dissertation Committee: Professor Iris Meier, Advisor Professor Biao Ding Professor Stephen Osmani Professor R. Keith Slotkin Copyright by Xiao Zhou 2013 Abstract The nuclear envelope (NE) is a double membrane system consisting of an inner nuclear membrane (INM) and an outer nuclear membrane (ONM). Studies in opisthokonts revealed that the two membranes are bridged by protein complexes formed by the INM Sad1/UNC-84 (SUN) proteins and the ONM Klarsicht/ANC-1/Syne-1 homology (KASH) proteins. These SUN-KASH NE bridges are usually linkers of the nucleoskeleton to the cytoskeleton (LINC) conserved across eukaryotes. LINC complexes are key players in multiple cellular processes, such as nuclear and chromosomal positioning and nuclear shape determination, which in turn influence the gametogenesis and several aspects of development. Although these cellular processes have long been also known in plants, no KASH proteins are encoded in the plant genomes. I identified WPP domain interacting proteins (WIPs) as the first plant KASH protein analogs. WIPs are plant-specific ONM proteins that redundantly anchor Ran GTPase activating protein (RanGAP) to the NE. Arabidopsis thaliana WIPs (AtWIPs) interact with Arabidopsis thaliana SUN proteins (AtSUNs), which is required for both AtWIP1 and AtRanGAP1 NE localization. In addition, AtWIPs and AtSUNs are necessary for maintaining the elongated nuclear shape of Arabidopsis epidermal cells. -
Nuclear Titin Interacts with A- and B-Type Lamins in Vitro and in Vivo
Research Article 239 Nuclear Titin interacts with A- and B-type lamins in vitro and in vivo Michael S. Zastrow1,*, Denise B. Flaherty2‡, Guy M. Benian2 and Katherine L. Wilson1,§ 1Department of Cell Biology, The Johns Hopkins University School of Medicine, 725 N. Wolfe St, Baltimore, MD 21205, USA 2Department of Pathology, Emory University, Whitehead Biomedical Research Building, Atlanta, GA 30332, USA *Present address: Department of Developmental Biology, Stanford University School of Medicine, Beckman Center, B300, 279 Campus Drive, Stanford, CA 94305, USA ‡Department of Biology, Eckerd College, SHB 105, 4200 54th Ave, St Petersburg, FL 33711, USA §Author for correspondence (e-mail: [email protected]) Accepted 4 October 2005 Journal of Cell Science 119, 239-249 Published by The Company of Biologists 2006 doi:10.1242/jcs.02728 Summary Lamins form structural filaments in the nucleus. Mutations lamin-downregulated [lmn-1(RNAi)] embryos, Ce-titin was in A-type lamins cause muscular dystrophy, undetectable at the nuclear envelope suggesting its cardiomyopathy and other diseases, including progeroid localization or stability requires Ce-lamin. In human cells syndromes. To identify new binding partners for lamin A, (HeLa), antibodies against the titin-specific domain M-is6 we carried out a two-hybrid screen with a human skeletal- gave both diffuse and punctate intranuclear staining by muscle cDNA library, using the Ig-fold domain of lamin A indirect immunofluorescence, and recognized at least three as bait. The C-terminal region of titin was recovered twice. bands larger than 1 MDa in immunoblots of isolated HeLa Previous investigators showed that nuclear isoforms of titin nuclei. -
Nesprins: from the Nuclear Envelope and Beyond
expert reviews http://www.expertreviews.org/ in molecular medicine Nesprins: from the nuclear envelope and beyond Dipen Rajgor and Catherine M. Shanahan* Nuclear envelope spectrin-repeat proteins (Nesprins), are a novel family of nuclear and cytoskeletal proteins with rapidly expanding roles as intracellular scaffolds and linkers. Originally described as proteins that localise to the nuclear envelope (NE) and establish nuclear-cytoskeletal connections, nesprins have now been found to comprise a diverse spectrum of tissue specific isoforms that localise to multiple sub-cellular compartments. Here, we describe how nesprins are necessary in maintaining cellular architecture by acting as essential scaffolds and linkers at both the NE and other sub-cellular domains. More importantly, we speculate how nesprin mutations may disrupt tissue specific nesprin scaffolds and explain the tissue specific nature of many nesprin-associated diseases, including laminopathies. The eukaryotic cytoplasm contains three major composed of three α-helical bundles with a left- types of cytoskeletal filaments: Filamentous- handed twist, and its primary function is to actin (F-actin), microtubules (MTs) and provide docking sites for proteins and other intermediate filaments (IFs). These components higher order complexes (Refs 3, 4). Although are organised in a manner that provides the cell most SR proteins contain CHDs, some possess with an internal framework fundamental for motifs which can interact with other cytoskeletal many processes, such as controlling cellular components, allowing linkage of SR-associated shape, polarity, adhesion and migration, complexes to filamentous structures other than cytokinesis, inter- and intracellular F-actin. In addition, these motifs allow cross- Nesprins: from the nuclear envelope and beyond communication and trafficking of organelles, linking between different filaments and dynamic vesicles, proteins and RNA (Refs 1, 2). -
The Nuclear Envelope: Target and Mediator of the Apoptotic Process Liora Lindenboim1, Hila Zohar1,Howardj.Worman2 and Reuven Stein1
Lindenboim et al. Cell Death Discovery (2020) 6:29 https://doi.org/10.1038/s41420-020-0256-5 Cell Death Discovery REVIEW ARTICLE Open Access The nuclear envelope: target and mediator of the apoptotic process Liora Lindenboim1, Hila Zohar1,HowardJ.Worman2 and Reuven Stein1 Abstract Apoptosis is characterized by the destruction of essential cell organelles, including the cell nucleus. The nuclear envelope (NE) separates the nuclear interior from the cytosol. During apoptosis, the apoptotic machinery, in particular caspases, increases NE permeability by cleaving its proteins, such as those of the nuclear pore complex (NPC) and the nuclear lamina. This in turns leads to passive diffusion of cytosolic apoptogenic proteins, such as caspases and nucleases, through NPCs into the nucleus and the subsequent breakdown of the NE and destruction of the nucleus. However, NE leakiness at early stages of the apoptotic process can also occur in a caspase-independent manner, where Bax, by a non-canonical action, promotes transient and repetitive localized generation and subsequent rupture of nuclear protein-filled nuclear bubbles. This NE rupture leads to discharge of apoptogenic nuclear proteins from the nucleus to the cytosol, a process that can contribute to the death process. Therefore, the NE may play a role as mediator of cell death at early stages of apoptosis. The NE can also serve as a platform for assembly of complexes that regulate the death process. Thus, the NE should be viewed as both a mediator of the cell death process and a target. 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; Facts redistribution of the nuclear proteins to the cytosol that might subsequently act as amplifiers of the ● The NE is an important target of the apoptotic apoptotic process. -
Eleven Daughters of NANOG
Genomics 84 (2004) 229–238 www.elsevier.com/locate/ygeno Eleven daughters of NANOG$ H. Anne F. Booth and Peter W.H. Holland* Department of Zoology, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK Received 4 December 2003; accepted 25 February 2004 Available online 15 April 2004 Abstract Nanog is a recently discovered ANTP class homeobox gene. Mouse Nanog is expressed in the inner cell mass and in embryonic stem cells and has roles in self-renewal and maintenance of pluripotency. Here we describe the location, genomic organization, and relative ages of all human NANOG pseudogenes, comprising ten processed pseudogenes and one tandem duplicate. These are compared to the original, intact human NANOG gene. Eleven is an unusually high number of pseudogenes for a homeobox gene and must reflect expression in the human germ line. A pseudogene orthologous to NANOGP4 was found in chimpanzee and an expressed pseudogene in macaque. Examining pseudogenes of differing ages gives insight into pseudogene decay, which involves an excess of deletion mutations over insertions. The mouse genome has two processed pseudogenes, which are not clear orthologues of the primate pseudogenes. D 2004 Elsevier Inc. All rights reserved. Keywords: Homeobox; Pseudogene; Molecular evolution; Enk Homeobox genes are characterized by possession of a Mitsui and colleagues [3] identified a single human recognizable 60- or 63-amino-acid motif within the orthologue of the mouse Nanog gene, mapping to encoded protein. The homeobox gene superfamily is 12p13.31. extremely diverse, particularly within animal genomes, As of February 2004, the Mouse Genome Informatics and can be subdivided into several major classes, each web site and National Center for Biotechnology Information containing numerous gene families. -
Abnormal Nuclear Shape and Impaired Mechanotransduction in Emerin
JCB: ARTICLE Abnormal nuclear shape and impaired mechanotransduction in emerin-deficient cells Jan Lammerding,1 Janet Hsiao,2 P. Christian Schulze,1 Serguei Kozlov,3 Colin L. Stewart,3 and Richard T. Lee1 1Cardiovascular Division, Brigham and Women’s Hospital, Boston, MA 02115 2HST Division, Massachusetts Institute of Technology, Cambridge, MA 02139 3Cancer and Developmental Biology Lab, National Cancer Institute, Frederick, MD 21702 mery-Dreifuss muscular dystrophy can be caused type cells in cellular strain experiments, and the integrity by mutations in the nuclear envelope proteins lamin of emerin-deficient nuclear envelopes appeared normal E A/C and emerin. We recently demonstrated that in a nuclear microinjection assay. Interestingly, expres- A-type lamin-deficient cells have impaired nuclear me- sion of mechanosensitive genes in response to mechani- chanics and altered mechanotransduction, suggesting cal strain was impaired in emerin-deficient cells, and two potential disease mechanisms (Lammerding, J., P.C. prolonged mechanical stimulation increased apoptosis in Schulze, T. Takahashi, S. Kozlov, T. Sullivan, R.D. Kamm, emerin-deficient cells. Thus, emerin-deficient mouse em- C.L. Stewart, and R.T. Lee. 2004. J. Clin. Invest. 113: bryo fibroblasts have apparently normal nuclear me- 370–378). Here, we examined the function of emerin on chanics but impaired expression of mechanosensitive nuclear mechanics and strain-induced signaling. Emerin- genes in response to strain, suggesting that emerin muta- deficient mouse embryo fibroblasts have -
Modulation of Lymphocyte Receptor Mobility by Locally Bound
Proc. Nat. Acad. Sci. USA Vol. 72, No. 4, pp. 1579-1583, April 1975 Modulation of Lymphocyte Receptor Mobility by Locally Bound Concanavalin A (cell membrane/cap formation/lectins/insolubilized concanavalin A) ICHIRO YAHARA AND GERALD M. EDELMAN The Rockefeller University, New York, N.Y. 10021 Contributed by Gerald M. Edelman, February 7, 1975 ABSTRACT Binding of concanavalin A (Con A) to the capping phenomenon raised the possibility that our earlier lymphocyte surface at room temperature leads to restric- observations on restriction of receptor mobility by Con A tion of the mobility of a variety of cell surface receptors in- immobilization of various cluding those for immunoglobulin (Ig), 0, H-2, j02-micro- might be explained by simple globulin, Fc receptors, as well as receptors for other receptors after their cross-linkage by multivalent Con A lectins. Addition of colchicine to the cell suspensions molecules to Con A receptors that are in turn anchored to reverses this effect and allows Con A receptors as well the hypothesized cytoplasmic assembly. as other receptors to form patches and caps. Cap- this we have prepared Con A ping of Con A receptors results in "co-capping" of Ig, In order to test possibility, H-2, 6, Fc receptors, and 62-microglobulin in the ab- bound to platelets and latex beads and have shown that local sence of ligands specific for these receptors. Receptors attachment of these particles to a small fraction of Con A binding Limulus hemagglutinin and wax bean agglutinin, receptor sites on the cell surface inhibits the mobility of Ig as well as those interacting with carbohydrate-specific and other receptors. -
Mir-34/449 Control Apical Actin Network Formation During Multiciliogenesis Through Small Gtpase Pathways
ARTICLE Received 7 Jul 2015 | Accepted 17 Aug 2015 | Published 18 Sep 2015 DOI: 10.1038/ncomms9386 OPEN miR-34/449 control apical actin network formation during multiciliogenesis through small GTPase pathways Benoıˆt Chevalier1,2,*, Anna Adamiok3,*, Olivier Mercey1,2,*, Diego R. Revinski3, Laure-Emmanuelle Zaragosi1,2, Andrea Pasini3, Laurent Kodjabachian3, Pascal Barbry1,2 & Brice Marcet1,2 Vertebrate multiciliated cells (MCCs) contribute to fluid propulsion in several biological processes. We previously showed that microRNAs of the miR-34/449 family trigger MCC differentiation by repressing cell cycle genes and the Notch pathway. Here, using human and Xenopus MCCs, we show that beyond this initial step, miR-34/449 later promote the assembly of an apical actin network, required for proper basal bodies anchoring. Identification of miR-34/449 targets related to small GTPase pathways led us to characterize R-Ras as a key regulator of this process. Protection of RRAS messenger RNA against miR-34/449 binding impairs actin cap formation and multiciliogenesis, despite a still active RhoA. We propose that miR-34/449 also promote relocalization of the actin binding protein Filamin-A, a known RRAS interactor, near basal bodies in MCCs. Our study illustrates the intricate role played by miR-34/449 in coordinating several steps of a complex differentiation programme by regulating distinct signalling pathways. 1 CNRS, Institut de Pharmacologie Mole´culaire et Cellulaire (IPMC), UMR-7275, 660 route des Lucioles, 06560 Sophia-Antipolis, France. 2 University of Nice-Sophia-Antipolis (UNS), Institut de Pharmacologie Mole´culaire et Cellulaire, 660 route des Lucioles, Valbonne, 06560 Sophia-Antipolis, France. -
N Karry: the KASH Domain Family of Cargo-Specific Cytoskeletal Adaptor Proteins Daniel A
Review articles KASH ‘n Karry: the KASH domain family of cargo-specific cytoskeletal adaptor proteins Daniel A. Starr1 and Janice A. Fischer2* Summary membrane interacts with the cytoskeleton to position nuclei A diverse family of proteins has been discovered with a within the cell. As the nucleus is probably the easiest cargo to small C-terminal KASH domain in common. KASH domain proteins are localized uniquely to the outer visualize and follow in real time, nuclear positioning makes an nuclear envelope, enabling their cytoplasmic extensions excellent model to study cargo adaptors. Also, nuclear to tether the nucleus to actin filaments or microtubules. migration through the cytoplasm and nuclear anchorage KASH domains are targeted to the outer nuclear envelope within a polarized cell are essential processes for the develop- by SUN domains of inner nuclear envelope proteins. ment of nearly all eukaryotes (for review see Refs. 1–3). Our Several KASH protein genes were discovered as mutant story begins with a group of Drosophila and C. elegans alleles in model organisms with defects in developmen- tally regulated nuclear positioning. Recently, KASH-less mutants with mispositioned nuclei (Fig. 1). As described below, isoforms have been found that connect the cytoskeleton molecular characterization of these mutants has identified a to organelles other than the nucleus. A widened view of class of outer nuclear membrane components called KASH these proteins is now emerging, where KASH proteins proteins. Recent evidence has shown that certain isoforms of and their KASH-less counterparts are cargo-specific adaptors that not only link organelles to the cytoskeleton these proteins adapt cargos other than the nucleus.