Chemical Modification of Microsomal Cytochrome P450: Role of Lysyl Residues in Hydroxylation Activity

Total Page:16

File Type:pdf, Size:1020Kb

Chemical Modification of Microsomal Cytochrome P450: Role of Lysyl Residues in Hydroxylation Activity View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Volume 161, number 2 J?EBS 0813 September 1983 Chemical modification of microsomal cytochrome P450: role of lysyl residues in hydroxylation activity Barbara C. Kunz and Christoph Richter* Eidgeniissische Technische Hochschule, Laboratorium fiir Biochemie I, Universitiitstrasse 16, CH-8092 Zurich, Switzerland Received 4 August 1983 Cytochrome P450 purified from phenobarbital-induced rat liver microsomes was acetylakd at 3 lysyl residues. When reconstituted with purified NADPH-cytochrome P450 reductase, the modified cytochrome showed full activity and substrate-induced spectral changes with d-benzphetamine. With 7-ethoxycoumar- in, neither enzymic activity nor binding was detected. It is concluded that the positively charged lysine residues of cytochrome P450 are important for metabolism of ‘I-ethoxycoumarin by cytochrome P450. Microsomal monoxygenase Cytochrome P450 activity Acetylation Reconstitution 1. INTRODUCTION stoichiometry (20-30 cytochromes/recfuctase) raises questions as to the mechanism of electron Cytochrome P450 and NADPH-cytochrome transfer from the reductase to the cytochrome and P450 reductase are key enzymes of the hepatic the functional interactions of the proteins in the microsomal monooxygenase system, catalyzing the monooxygenase system. oxidative metabolism of endogenous substrates Some progress has been made in our under- and many xenobiotics [l-3]. The reductase standing of the structure of cytochrome P450. (Mr - 78000) is anchored to the membrane via a Amino acid sequences of several species are now small (M- 6000) hydrophobic segment [4,5]. The available [7,8]. In addition the dimension of the large hydrophilic part protrudes from the mem- heme pocket has been partially characterized by brane into the cytoplasmic space and accepts heme alkylation studies [9, lo]. electrons from NADPH. Cytochrome P450 By combining physical, biochemical and im- (M,-SOOOO), on the other hand, is deeply imbed- munological techniques we demonstrated the for- ded in the membrane [6]. The arrangement of the mation of heterodimeric complexes between two enzymes in the membrane and their odd cytochrome P450 and its reductase co-reconstitu- ted into liposomal vesicles and capable of substrate hydroxylation [ 1 l-131. We are now chemically * To whom correspondence should be addressed modifying specific sites of the proteins to improve our understanding of the functional interactions of Abbreviations: PC, phosphatidylcholine; PE, phospha- tidylethanolamine; PS, phosphatidylserine; SDS- the proteins. Here, we show that limited acetyla- PAGE, sodium dodecylsulfate-polyacrylamide gel elec- tion of lysyl residues of cytochrome P450 leads to trophoresis; EDTA, ethylene diaminetetraacetate; a complete loss of ethoxycoumarin dealkylation HEPES, 4-(2-hydroxyethyl)-I-piperazineethane sulfonic activity whereas the dealkylation of benzphet- acid amine is not affected. Published by Elsevier Science Publishers B. V. 00145793/83/$3.00 0 1983 Federation of European Biochemical Societies 311 Volume 161, number 2 FEBS LETTERS September 1983 2. MATERIALS AND METHODS groups [ 191 was applied to cytochrome P450. One volume of cytochrome P450 (26 PM), pre- Phospholipids [egg phosphatidylcholine (PC), equilibrated with 50 mM HEPES (pH 8.0, 2O@i’o egg phosphatidylethanolamine (PE), bovine spinal glycerol), was mixed with half this volume of a cord phosphatidylserine (PS), all grade I] were freshly prepared, saturated sodium acetate solu- purchased from Lipid Products (South Nutfield) tion, containing 20% glycerol and [3H]acetic and stored at - 20°C. Dilauroylphosphatidyl- anhydride (10 mM, 30 &i/ml). The solution was choline was from Sigma (St. Louis, MO). [‘HI- stirred at room temperature. After 10 min the same Acetic anhydride (500 mCi/mmol) was from the amount of the above-mentioned sodium acetate Radiochemical Centre (Amersham). d-Benzphet- acetic anhydride solution was added. Stirring was amine was from Upjohn. 7-Ethoxycoumarin was continued for 20 min. Cytochrome P450 in vesicles prepared as in [14]. All other reagents were of the was acetylated by the same procedure. highest grade available. 2.4. Determination of the acetylated amino acids 2.1. Analytical procedures 3H was measured with an Isocap 300 liquid scin- All spectral analyses were performed at 25°C us- tillation counter, after separation of the protein by ing a Cary 219 spectrophotometer. Cytochrome SDS-PAGE. The gel containing cytochrome P450 P450 concentration was determined as in [ 151. Pro- was sliced and dissociated in 500 ~1 hydrogen tein concentration was measured by the Lowry peroxide (30%) at 60°C overnight, prior to adding assay [16] using bovine serum albumin as a stan- the scintillation liquid. The nature of the acetyl- dard. SDS-PAGE was performed according to ated residues was affirmed by amino acid analysis Laemmli [17]. after dansylation [20] of the protein. Isolation of cytochrome P450, NADPH- cytochrome P450 reductase and the preparation of 2.5. Enzyme assays proteoliposomes (PC/PE/PS, 10: 5 : 1, by wt) was Ethoxycoumarin 0-de-ethylase activity was perfofmed as in [12]. Either protein showed a measured as in [14] except that cytochrome P450 single band when analyzed on SDS-PAGE. Addi- either in vesicles or in solution in the presence of tional evidence that we have only a single species of a NADPH regenerating system (glucose 6-phos- cytochrome P450 in our preparation is supported phate (5 mM), glucose 6-phosphate dehydrogenase by its similar catalytic activity and substrate (2.5 units)) was used instead of microsomes. Benz- specificity to that of cytochrome P450 PB-B phetamine hydroxylation was determined as in described in [18]. For the enzyme assays, [ 121. Substrate-induced difference spectra in the acetylated cytochrome P450 containing vesicles Soret region were recorded in tandem cuvettes with were dissociated by cholate. NADPH-cytochrome vesicles in 100 mM KPi (pH 7.4, 20% glycerol). P450 reductase was added and vesicles were form- ed again by the cholate-dialysis techniques. 3. RESULTS 2.2. Reconstitution in dilauroylphosphatidyl- choline Specific acetylation of lysyl residues can be Cytochrome P450 and NADPH-cytochrome P450 achieved with acetic anhydride in the presence of reductase were mixed with freshly sonicated sodium acetate [19]. When dimethyl sulfoxide was dilauroylphosphatidylcholine (0.2% (w/w) in 0.1 used as solvent of acetic anhydride to prevent its mM EDTA) to give protein/lipid = 1: 10 (w/w). rapid hydrolysis cytochrome P450 proved un- The samples were incubated for 10 min at room stable. At 5°C and with a 400-fold excess of acetic temperature. In all reconstitution experiments the anhydride over cytochrome P450 in aqueous buf- molar ratio of cytochrome P450 to reductase was fer no significant heme loss (< 5%) or denatura- 5:l. tion of the cytochrome as judged by heme *CO spectroscopy was detected. The extent of acetyla- 2.3. Acetyiation of cytochrome P4.50 tion was reproducible under these conditions. A method for the acetylation of e-lysyl-amino Fig.1. shows the protein pattern and distribution 312 Volume 161, number 2 FEBS LETTERS September 1983 lysis and amino acid analysis as in [21] (not shown). Acetylation of cytochrome P450 in solu- tion (i.e., in the presence of dilauroylphosphatidyl- choline) gave similar results. Acetylation of phos- pholipids was not detected. Acetylated cytochrome P450 reconstituted into liposomes or in solution showed 110% f 50% (n = 12) of the activity of the native protein with benzphetamine as substrate for hydroxylation. Within a single set of experiments reproducibility of these activity measurements was good ( f 10%). u l dpm Large variations were observed however between 1000 2000 3000 different sets of experiments, with values ranging from 30-194 nmol formaldehyde formed. min- * . Fig.1. Protein pattern and distribution of radioactivity nmol cytochrome P450 - ‘. The dealkylation rate of acetylated cytochrome P450. lo-15% SDS-PAGE of ethoxycoumarin catalyzed by native cytochrome was performed as in 1171; cytochrome P450 was P450 reconstituted into liposomes or in solution acetylated with [‘HIacetic anhydride as in section 2. Each lane was loaded with 0.12 nmol cytochrome P450. was 250+ 26 pmol (n = 8) min- ’ . nmol cyto- chrome P450- ‘. No dealkylation of this substrate by acetylated cytochrome P450 was observed. The presence of poly(lysine) in amounts equimolar to of radioactivity of acetylated cytochrome P450 cytochrome P450 completely inhibited the analyzed on SDS-PAGE. From these experi- dealkylation of ethoxycoumarin whereas this ments, 2.8 +0.5 (n = 23) acetyl residues were polycation did not alter the hydroxylation of calculated to be bound per one cytochrome mole- benzphetamine. cule. Precipitation of the modified protein by acid Substrate binding studies of native or acetylated and subsequent filtration followed by liquid scin- cytochrome P450 reconstituted into liposomes or tillation indicated attachment of 3.0 f 0.2 (n = 3) in solution showed typical type I spectra with benz- acetyl groups to cytochrome P450. The specificity phetamine (fig.aa,b) while ethoxycoumarin induc- of the modification and the number of lysyl ed spectral changes only in the native (fig.2c) but residues modified was confirmed by acid hydro- not in the acetylated cytochrome. 350nm 420nm 5OOnm 420nm 500nm 4201~1 5OOm-l Fig.2. Substrate-induced difference spectra of cytochrome P450 reconstituted in liposomes:
Recommended publications
  • Emerging Role of the Hexosamine Biosynthetic Pathway in Cancer Neha M
    Akella et al. BMC Biology (2019) 17:52 https://doi.org/10.1186/s12915-019-0671-3 REVIEW Open Access Fueling the fire: emerging role of the hexosamine biosynthetic pathway in cancer Neha M. Akella, Lorela Ciraku and Mauricio J. Reginato* “ ” Abstract conditions [2]. This switch, termed the Warburg effect , funnels glycolytic intermediates into pathways that produce Altered metabolism and deregulated cellular energetics nucleosides, amino acids, macromolecules, and organelles are now considered a hallmark of all cancers. Glucose, required for rapid cell proliferation [3]. Unlike normal cells, glutamine, fatty acids, and amino acids are the primary cancer cells reprogram cellular energetics as a result of drivers of tumor growth and act as substrates for the oncogenic transformations [4]. The hexosamine biosyn- hexosamine biosynthetic pathway (HBP). The HBP thetic pathway utilizes up to 2–5% of glucose that enters a culminates in the production of an amino sugar uridine non-cancer cell and along with glutamine, acetyl- diphosphate N-acetylglucosamine (UDP-GlcNAc) that, coenzyme A (Ac-CoA) and uridine-5′-triphosphate (UTP) along with other charged nucleotide sugars, serves as the are used to produce the amino sugar UDP-GlcNAc [5]. basis for biosynthesis of glycoproteins and other The HBP and glycolysis share the first two steps and di- glycoconjugates. These nutrient-driven post-translational verge at fructose-6-phosphate (F6P) (Fig. 1). Glutamine modifications are highly altered in cancer and regulate fructose-6-phosphate amidotransferase (GFAT) converts protein functions in various cancer-associated processes. F6P and glutamine to glucosamine-6-phosphate and glu- In this review, we discuss recent progress in tamate in the rate-limiting step of HBP [6].
    [Show full text]
  • Tricarboxylic Acid (TCA) Cycle Intermediates: Regulators of Immune Responses
    life Review Tricarboxylic Acid (TCA) Cycle Intermediates: Regulators of Immune Responses Inseok Choi , Hyewon Son and Jea-Hyun Baek * School of Life Science, Handong Global University, Pohang, Gyeongbuk 37554, Korea; [email protected] (I.C.); [email protected] (H.S.) * Correspondence: [email protected]; Tel.: +82-54-260-1347 Abstract: The tricarboxylic acid cycle (TCA) is a series of chemical reactions used in aerobic organisms to generate energy via the oxidation of acetylcoenzyme A (CoA) derived from carbohydrates, fatty acids and proteins. In the eukaryotic system, the TCA cycle occurs completely in mitochondria, while the intermediates of the TCA cycle are retained inside mitochondria due to their polarity and hydrophilicity. Under cell stress conditions, mitochondria can become disrupted and release their contents, which act as danger signals in the cytosol. Of note, the TCA cycle intermediates may also leak from dysfunctioning mitochondria and regulate cellular processes. Increasing evidence shows that the metabolites of the TCA cycle are substantially involved in the regulation of immune responses. In this review, we aimed to provide a comprehensive systematic overview of the molecular mechanisms of each TCA cycle intermediate that may play key roles in regulating cellular immunity in cell stress and discuss its implication for immune activation and suppression. Keywords: Krebs cycle; tricarboxylic acid cycle; cellular immunity; immunometabolism 1. Introduction The tricarboxylic acid cycle (TCA, also known as the Krebs cycle or the citric acid Citation: Choi, I.; Son, H.; Baek, J.-H. Tricarboxylic Acid (TCA) Cycle cycle) is a series of chemical reactions used in aerobic organisms (pro- and eukaryotes) to Intermediates: Regulators of Immune generate energy via the oxidation of acetyl-coenzyme A (CoA) derived from carbohydrates, Responses.
    [Show full text]
  • Tunable, Post-Translational Hydroxylation of Collagen Domains in Escherichia Coli † § † § ‡ † Daniel M
    LETTERS pubs.acs.org/acschemicalbiology Tunable, Post-translational Hydroxylation of Collagen Domains in Escherichia coli † § † § ‡ † Daniel M. Pinkas, , Sheng Ding, , Ronald T. Raines, and Annelise E. Barron ,* † Department of Bioengineering and, by courtesy, Department of Chemical Engineering, Schools of Medicine and of Engineering, Stanford University, Stanford, California 94305, United States ‡ Departments of Biochemistry and Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States bS Supporting Information ABSTRACT: Prolyl 4-hydroxylases are ascorbate-dependent oxygenases that play key roles in a variety of eukaryotic biological processes including oxygen sensing, siRNA regula- tion, and collagen folding. They perform their functions by catalyzing the post-translational hydroxylation of specificpro- line residues on target proteins to form (2S,4R)-4-hydroxypro- line. Thus far, the study of these post-translational modifica- tions has been limited by the lack of a prokaryotic recombinant expression system for producing hydroxylated proteins. By introducing a biosynthetic shunt to produce ascorbate-like molecules in Eschericia coli cells that heterologously express human prolyl 4-hydroxylase (P4H), we have created a strain of E. coli that produces collagenous proteins with high levels of (2S,4R)-4-hydroxyproline. Using this new system, we have observed hydroxylation patterns indicative of a processive catalytic mode for P4H that is active even in the absence of ascorbate. Our results provide insights into P4H enzymology and create a foundation for better understanding how post- translational hydroxylation affects proteins. ioxygenases dependent on R-ketoglutarate play diverse roles Thus, reconstitution of collagen folding pathways in a prokaryotic Din a variety of eukaryotic biological processes, by catalyzing the host will greatly increase our understanding of how these essential irreversible post-translational hydroxylation of proteins.1 They biomolecules assemble.
    [Show full text]
  • Ihyd-Pseaac: Predicting Hydroxyproline and Hydroxylysine in Proteins by Incorporating Dipeptide Position-Specific Propensity Into Pseudo Amino Acid Composition
    Int. J. Mol. Sci. 2014, 15, 7594-7610; doi:10.3390/ijms15057594 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Article iHyd-PseAAC: Predicting Hydroxyproline and Hydroxylysine in Proteins by Incorporating Dipeptide Position-Specific Propensity into Pseudo Amino Acid Composition Yan Xu 1,5,*, Xin Wen 1, Xiao-Jian Shao 2, Nai-Yang Deng 3 and Kuo-Chen Chou 4,5 1 Department of Information and Computer Science, University of Science and Technology Beijing, Beijing 100083, China; E-Mail: [email protected] 2 Department of Mathematics and Information Science, Binzhou University, Binzhou 256603, China; E-Mail: [email protected] 3 College of Science, China Agricultural University, Beijing 100083, China; E-Mail: [email protected] 4 Center of Excellence in Genomic Medicine Research (CEGMR), King Abdulaziz University, Jeddah 21589, Saudi Arabia; E-Mail: [email protected] 5 Gordon Life Science Institute, Boston, MA 02478, USA * Author to whom correspondence should be addressed; E-Mail: [email protected] or [email protected]; Tel./Fax: +86-10-6233-2589. Received: 7 February 2014; in revised form: 4 April 2014 / Accepted: 17 April 2014 / Published: 5 May 2014 Abstract: Post-translational modifications (PTMs) play crucial roles in various cell functions and biological processes. Protein hydroxylation is one type of PTM that usually occurs at the sites of proline and lysine. Given an uncharacterized protein sequence, which site of its Pro (or Lys) can be hydroxylated and which site cannot? This is a challenging problem, not only for in-depth understanding of the hydroxylation mechanism, but also for drug development, because protein hydroxylation is closely relevant to major diseases, such as stomach and lung cancers.
    [Show full text]
  • And the Failure to Detect N-Acetylation of 2-Aminofluorene in the Dog*
    The N- and Ring-Hydroxylation of 2-Acetylaminofluorene and the Failure To Detect N-Acetylation of 2-Aminofluorene in the Dog* LIONEL A. P0IRIER, JAMES A. MILLER, AND ELIZABETH C. MILLER (McArdle Memorial Latoratoryfor Cancer Research, Medical School, University of Wiscon.rin, Madison, Wisconthi) SUMMARY N-Hydroxy-2-acetylaminofluorene (N-hydroxy-AAF), in conjugated form, was identified as a urinary metabolite of 2-acetylaminofluorene (AM') in male mongrel dogs. This metabolite was isolated and characterized in crystalline form. 7-Hydnoxy AM', in conjugated form, and AM? were also found in the urine of dogs fed AAF; no 1-, 3-, or 5-hydroxy-AAF was detected. The ingestion of N-hydroxy-AAF led to the urinary excretion of the same metabolites; however, none of these acetylated metabo lites was detected in the urine of dogs fed 2-aminofluorene, N-hydroxy-2-aminofluorene, 1-hydroxy-AAF, or 3-hydroxy-AAF. Dietary supplementation with calcium pantoth enate and riboflavin and an attempt to induce acetylase activity by feeding 2-amino fluonene for several days did not lead to the urinary excretion of any recognizable acetylated urinary metabolites of 2-aminofluorene. Furthermore, under similar condi tions the specific activities of the acetylated urinary metabolites of 2-(acetyl-1'-C'4) aminofluonene fed in mixtures with unlabeled 2-aminofluorene were not appreciably different from the specific activity of the ingested acetyl-labeled AAF. In a dog fed a single dose of AAF-9-C'4 63 pen cent of the C'4 was excreted in the feces, and 19 per cent of the C'4 was found in the urine during the next 5 days.
    [Show full text]
  • Rate of Phenylalanine Hydroxylation in Healthy School-Aged Children
    0031-3998/11/6904-0341 Vol. 69, No. 4, 2011 PEDIATRIC RESEARCH Printed in U.S.A. Copyright © 2011 International Pediatric Research Foundation, Inc. Rate of Phenylalanine Hydroxylation in Healthy School-Aged Children JEAN W. HSU, FAROOK JAHOOR, NANCY F. BUTTE, AND WILLIAM C. HEIRD Department of Pediatrics, USDA-ARS Children’s Nutrition Research Center, Baylor College of Medicine, Houston, Texas 77030 ABSTRACT: Hydroxylation of phenylalanine to tyrosine is the first adults may be due to phenylalanine hydroxylation being lim- and rate-limiting step in phenylalanine catabolism. Currently, there ited in children. It was suggested that phenylalanine may not are data on the rate of phenylalanine hydroxylation in infants and provide the total needs for phenylalanine plus tyrosine in adults but not in healthy children. Thus, the aim of the study reported children fed an amino acid-based diet without tyrosine (16). here was to measure the rate of phenylalanine hydroxylation and Thus, further investigation of the rate of phenylalanine hy- oxidation in healthy school-aged children both when receiving diets droxylation in children is necessary. with and without tyrosine. In addition, hydroxylation rates calculated from the isotopic enrichments of amino acids in plasma and in very In the past, the rate of phenylalanine hydroxylation was LDL apoB-100 were compared. Eight healthy 6- to 10-y-old children mostly determined from phenylalanine and tyrosine isotopic were studied while receiving a control and again while receiving a enrichments measured in plasma. However, this approach may tyrosine-free diet. Phenylalanine flux, hydroxylation, and oxidation not be appropriate because it has been shown that phenylala- were determined by a standard tracer protocol using oral administra- nine hydroxylation rates were overestimated in parenterally 13 2 tion of C-phenylalanine and H2-tyrosine for 6 h.
    [Show full text]
  • Aspartyl F3-Hydroxylase: in Vitro Hydroxylation of a Synthetic
    Proc. Nadl. Acad. Sci. USA Vol. 86, pp. 3609-3613, May 1989 Biochemistry Aspartyl f3-hydroxylase: In vitro hydroxylation of a synthetic peptide based on the structure of the first growth factor-like domain of human factor IX (epidermal growth factor-like domain/f3-hydroxyaspartic acid) ROBERT S. GRONKE*, WILLIAM J. VANDUSEN*, VICTOR M. GARSKYt, JOHN W. JACOBSt, MOHINDER K. SARDANAt, ANDREW M. STERN*, AND PAUL A. FRIEDMAN*§ Departments of *Pharmacology, tMedicinal Chemistry, and tBiological Chemistry, Merck Sharp & Dohme Research Laboratories, West Point, PA 19486 Communicated by Edward M. Scolnick, February 17, 1989 ABSTRACT .3-Hydroxylation of aspartic acid is a post- (16) either with heavy metal chelators such as 2,2'-dipyridyl translational modification that occurs in several vitamin K- (dipy) or with 2,4-pyridine dicarboxylate, an analogue of dependent coagulation proteins. By use of a synthetic substrate 2-ketoglutarate (KG) known to block proline hydroxylase comprised of the first epidermal growth factor-like domain in (17), our initial experiments with EGF-IX1H used experimen- human factor IX and either mouse L-cell extracts or rat liver tal conditions favorable for KG dioxygenases such as prolyl microsomes as the source of enzyme, in vitro aspartyl 13- or lysyl hydroxylase (18). We report here in vitro demon- hydroxylation was accomplished. Aspartyl f3-hydroxylase ap- stration of .8-hydroxylation of Asp residues and show that pears to require the same cofactors as known a-ketoglutarate- this enzymatic activity requires both Fe2' and KG. dependent dioxygenases. The hydroxylation reaction proceeds with the same stereospecificity and occurs only at the aspartate corresponding to the position seen in vivo.
    [Show full text]
  • Thiol-Disulfide Exchange in Human Growth Hormone Saradha Chandrasekhar Purdue University
    Purdue University Purdue e-Pubs Open Access Dissertations Theses and Dissertations January 2015 Thiol-Disulfide Exchange in Human Growth Hormone Saradha Chandrasekhar Purdue University Follow this and additional works at: https://docs.lib.purdue.edu/open_access_dissertations Recommended Citation Chandrasekhar, Saradha, "Thiol-Disulfide Exchange in Human Growth Hormone" (2015). Open Access Dissertations. 1449. https://docs.lib.purdue.edu/open_access_dissertations/1449 This document has been made available through Purdue e-Pubs, a service of the Purdue University Libraries. Please contact [email protected] for additional information. i THIOL-DISULFIDE EXCHANGE IN HUMAN GROWTH HORMONE A Dissertation Submitted to the Faculty of Purdue University by Saradha Chandrasekhar In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy August 2015 Purdue University West Lafayette, Indiana ii To my parents Chandrasekhar and Visalakshi & To my fiancé Niranjan iii ACKNOWLEDGEMENTS I would like to thank Dr. Elizabeth M. Topp for her tremendous support, guidance and valuable suggestions throughout. The successful completion of my PhD program would not have been possible without her constant encouragement and enthusiasm. Through the last five years, I’ve learned so much as a graduate student in her lab. My thesis committee members: Dr. Stephen R. Byrn, Dr. Gregory T. Knipp and Dr. Weiguo A. Tao, thank you for your time and for all your valuable comments during my oral preliminary exam. I would also like to thank Dr. Fred Regnier for his suggestions with the work on human growth hormone. I am grateful to all my lab members and friends for their assistance and support. I would like to especially thank Dr.
    [Show full text]
  • The Role of Hypoxia-Inducible Factor Post-Translational Modifications In
    International Journal of Molecular Sciences Review The Role of Hypoxia-Inducible Factor Post-Translational Modifications in Regulating Its Localisation, Stability, and Activity Adam Albanese 1, Leonard A. Daly 2 , Daniela Mennerich 3, Thomas Kietzmann 3 and Violaine Sée 1,* 1 Department of Molecular Physiology and Cell Signalling, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool L697ZB, UK; [email protected] 2 Department of Biochemistry and System Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool L697ZB, UK; [email protected] 3 Faculty of Biochemistry and Molecular Medicine, Biocenter Oulu, University of Oulu, FI-90014 Oulu, Finland; Daniela.Mennerich@oulu.fi (D.M.); Thomas.Kietzmann@oulu.fi (T.K.) * Correspondence: [email protected] Abstract: The hypoxia signalling pathway enables adaptation of cells to decreased oxygen availability. When oxygen becomes limiting, the central transcription factors of the pathway, hypoxia-inducible factors (HIFs), are stabilised and activated to induce the expression of hypoxia-regulated genes, thereby maintaining cellular homeostasis. Whilst hydroxylation has been thoroughly described as the major and canonical modification of the HIF-α subunits, regulating both HIF stability and activity, a range of other post-translational modifications decorating the entire protein play also a crucial role in altering HIF localisation, stability, and activity. These modifications, their conservation throughout evolution, and their effects on HIF-dependent signalling are discussed in this review. Keywords: α α hypoxia; HIF-1 ; HIF-2 ; posttranslational modifications; phosphorylation; cysteine phosphorylation; methylation; acetylation; ubiquitination; sumoylation; S-nitrosylation; signalling Citation: Albanese, A.; Daly, L.A.; Mennerich, D.; Kietzmann, T.; Sée, V.
    [Show full text]
  • Proteolysis and Phenylalanine Hydroxylation in Response to Parenteral Nutrition in Extremely Premature and Normal Newborns
    Proteolysis and phenylalanine hydroxylation in response to parenteral nutrition in extremely premature and normal newborns. S C Denne, … , J Wang, E A Liechty J Clin Invest. 1996;97(3):746-754. https://doi.org/10.1172/JCI118473. Research Article To determine to what extent intravenous nutrition can reduce proteolysis in very immature and normal newborns, and to assess the capacity of preterm and normal newborns to convert phenylalanine to tyrosine, phenylalanine and leucine kinetics were measured under basal conditions and during parenteral nutrition in clinically stable, extremely premature (approximately 26 wk of gestation) infants and in normal term newborns. In response to parenteral nutrition, there was significantly less suppression (P < 0.001) of endogenous leucine and phenylalanine rate of appearance in extremely premature infants compared with term infants. Phenylalanine utilization for protein synthesis during parenteral nutrition increased significantly (P < 0.01) and by the same magnitude (approximately 15%) in both extremely premature and term infants. Phenylalanine was converted to tyrosine at substantial rates in both extremely premature and term infants; however, this conversion rate was significantly higher (P < 0.05) in extremely premature infants during both the basal and parenteral nutrition periods. These data provide clear evidence that there is no immaturity in the phenylalanine hydroxylation pathway. Furthermore, although parenteral nutrition appears to produce similar increases in protein synthesis in extremely premature and term infants, proteolysis is suppressed much less in extremely premature newborns. The factors responsible for this apparent resistance to suppression of proteolysis in the very immature newborn remain to be elucidated. Find the latest version: https://jci.me/118473/pdf Proteolysis and Phenylalanine Hydroxylation in Response to Parenteral Nutrition in Extremely Premature and Normal Newborns Scott C.
    [Show full text]
  • O-Glcnacylation Is a Key Regulator of Multiple Cellular Metabolic Pathways
    O-GlcNAcylation is a key regulator of multiple cellular metabolic pathways Hongshuo Zhang, Zhen Li, Yufei Wang and Ying Kong Core Laboratory of Glycobiology and Glycoengineering, College of Basic Medical Sciences, Dalian Medical University, Dalian, Liaoning, China ABSTRACT O-GlcNAcylation modifies proteins in serine or threonine residues in the nucleus, cytoplasm, and mitochondria. It regulates a variety of cellular biological processes and abnormal O-GlcNAcylation is associated with diabetes, cancer, cardiovascular disease, and neurodegenerative diseases. Recent evidence has suggested that O-GlcNAcylation acts as a nutrient sensor and signal integrator to regulate metabolic signaling, and that dysregulation of its metabolism may be an important indicator of pathogenesis in disease. Here, we review the literature focusing on O-GlcNAcylation regulation in major metabolic processes, such as glucose metabolism, mitochondrial oxidation, lipid metabolism, and amino acid metabolism. We discuss its role in physiological processes, such as cellular nutrient sensing and homeostasis maintenance. O-GlcNAcylation acts as a key regulator in multiple metabolic processes and pathways. Our review will provide a better understanding of how O-GlcNAcylation coordinates metabolism and integrates molecular networks. Subjects Biochemistry, Cell Biology, Metabolic Sciences Keywords O-GlcNAc, Nutrient sensing, Glucose uptake, Glycolysis, Mitochondria, Lipid metabolism, Glutamine, Signaling pathway, Homeostasis, TCA INTRODUCTION Increasing evidence has suggested
    [Show full text]
  • Regulation and Clinical Significance of O-Glcnac Transferase in Cancer
    www.impactjournals.com/oncotarget/ Vol.9, (No.1), Supplement 1, pp: s1267-s1285 Review Regulation and clinical significance of O-GlcNAc transferase in cancer Xinling Zhang1, Yuchao Gu2, Wengong Yu2 and Hui Liang1 1The Institute of Human Nutrition, Medical College of Qingdao University, Qingdao 266021, China 2Key Laboratory of Marine Drugs, Chinese Ministry of Education, Key Laboratory of Glycoscience and Glycotechnology of Shandong Province; School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China Correspondence to: Hui Liang, email: [email protected] Xinling Zhang, email: [email protected] Keywords: OGT; O-GlcNAcylation; expression; protein stability; activity Received: June 14, 2017 Accepted: November 03, 2017 Published: January 02, 2018 Copyright: Zhang et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ABSTRACT O-GlcNAc Transferase (OGT) resides in both cytosolic and nuclear compartments and catalyzes O-GlcNAcylation of myriad proteins. Numerous excellent reviews concerning roles of OGT in organismal and cellular physiology have exist, and aberrant OGT and protein O-GlcNAcylation have been implicated in progression and metastasis of different cancer types. Thus, understanding the regulation mechanisms of OGT and O-GlcNAcylation in tumor cells and their difference compared to non-tumor cells may elucidate new mechanisms related to tumor generation and development, could provide a new marker to diagnosis and prognosis in patients with cancer and indicate a new target to cancer chemotherapy. While it has become evident that OGT plays critical roles in cancers, it remains unclear how they are deregulated.
    [Show full text]