SUGI 26: Internet and Web Resources for SAS(R) Programmers and Statisticians
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Título Del Artículo
Software for learning and for doing statistics and probability – Looking back and looking forward from a personal perspective Software para aprender y para hacer estadística y probabilidad – Mirando atrás y adelante desde una perspectiva personal Rolf Biehler Universität Paderborn, Germany Abstract The paper discusses requirements for software that supports both the learning and the doing of statistics. It looks back into the 1990s and looks forward to new challenges for such tools stemming from an updated conception of statistical literacy and challenges from big data, the exploding use of data in society and the emergence of data science. A focus is on Fathom, TinkerPlots and Codap, which are looked at from the perspective of requirements for tools for statistics education. Experiences and success conditions for using these tools in various educational contexts are reported, namely in primary and secondary education and pre- service and in-service teacher education. New challenges from data science require new tools for education with new features. The paper finishes with some ideas and experience from a recent project on data science education at the upper secondary level Keywords: software for learning and doing statistics, key attributes of software, data science education, statistical literacy Resumen El artículo discute los requisitos que el software debe cumplir para que pueda apoyar tanto el aprendizaje como la práctica de la estadística. Mira hacia la década de 1990 y hacia el futuro, para identificar los nuevos desafíos que para estas herramientas surgen de una concepción actualizada de la alfabetización estadística y los desafíos que plantean el uso de big data, la explosión del uso masivo de datos en la sociedad y la emergencia de la ciencia de los datos. -
Antibiotic De-Escalation Experience in the Setting of Emergency Department: a Retrospective, Observational Study
Journal of Clinical Medicine Article Antibiotic De-escalation Experience in the Setting of Emergency Department: A Retrospective, Observational Study Silvia Corcione 1,2, Simone Mornese Pinna 1 , Tommaso Lupia 3,* , Alice Trentalange 1, Erika Germanò 1, Rossana Cavallo 4, Enrico Lupia 1 and Francesco Giuseppe De Rosa 1,2 1 Department of Medical Sciences, University of Turin, 10126 Turin, Italy; [email protected] (S.C.); [email protected] (S.M.P.); [email protected] (A.T.); [email protected] (E.G.); [email protected] (E.L.); [email protected] (F.G.D.R.) 2 Tufts University School of Medicine, Boston, MA 02129, USA 3 Infectious Diseases Unit, Cardinal Massaia Hospital, 14100 Asti, Italy 4 Microbiology and Virology Unit, University of Turin, 10126 Turin, Italy; [email protected] * Correspondence: [email protected]; Tel.: +39-0141-486-404 or +39-3462-248-637 Abstract: Background: Antimicrobial de-escalation (ADE) is a part of antimicrobial stewardship strategies aiming to minimize unnecessary or inappropriate antibiotic exposure to decrease the rate of antimicrobial resistance. Information regarding the effectiveness and safety of ADE in the setting of emergency medicine wards (EMW) is lacking. Methods: Adult patients admitted to EMW and receiving empiric antimicrobial treatment were retrospectively studied. The primary outcome was the rate and timing of ADE. Secondary outcomes included factors associated with early ADE, length of stay, and in-hospital mortality. Results: A total of 336 patients were studied. An initial regimen combining two agents was prescribed in 54.8%. Ureidopenicillins and carbapenems were Citation: Corcione, S.; Mornese the most frequently empiric treatment prescribed (25.1% and 13.6%). -
A Case-Guided Tutorial to Statistical Analysis and Plagiarism Detection
38HIPPOKRATIA 2010, 14 (Suppl 1): 38-48 PASCHOS KA REVIEW ARTICLE Revisiting Information Technology tools serving authorship and editorship: a case-guided tutorial to statistical analysis and plagiarism detection Bamidis PD, Lithari C, Konstantinidis ST Lab of Medical Informatics, Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece Abstract With the number of scientific papers published in journals, conference proceedings, and international literature ever increas- ing, authors and reviewers are not only facilitated with an abundance of information, but unfortunately continuously con- fronted with risks associated with the erroneous copy of another’s material. In parallel, Information Communication Tech- nology (ICT) tools provide to researchers novel and continuously more effective ways to analyze and present their work. Software tools regarding statistical analysis offer scientists the chance to validate their work and enhance the quality of published papers. Moreover, from the reviewers and the editor’s perspective, it is now possible to ensure the (text-content) originality of a scientific article with automated software tools for plagiarism detection. In this paper, we provide a step-by- step demonstration of two categories of tools, namely, statistical analysis and plagiarism detection. The aim is not to come up with a specific tool recommendation, but rather to provide useful guidelines on the proper use and efficiency of either category of tools. In the context of this special issue, this paper offers a useful tutorial to specific problems concerned with scientific writing and review discourse. A specific neuroscience experimental case example is utilized to illustrate the young researcher’s statistical analysis burden, while a test scenario is purpose-built using open access journal articles to exemplify the use and comparative outputs of seven plagiarism detection software pieces. -
The Role of Adipokines in Obesity-Associated Asthma
The role of adipokines in obesity-associated asthma By David Gibeon A thesis submitted to Imperial College London for the degree of Doctor of Philosophy in the Faculty of Medicine 2016 National Heart and Lung Institute Dovehouse Street, London SW3 6LY 1 Author’s declaration The following tests on patients were carried out by myself and nurses in the asthma clinic at the Royal Brompton Hospital: lung function measurements, exhaled nitric oxide (FENO) measurement, skin prick testing, methacholine provocation test (PC20), weight, height, waist/hip measurement, bioelectrical impedance analysis (BIA), and skin fold measurements. Fibreoptic bronchoscopies were performed by me and previous research fellows in the Airways Disease Section at the National Heart and Lung Institute (NHLI), Imperial College London. The experiments carried out in this PhD were carried out using the latest equipment available to me at the NHLI. The staining of bronchoalveolar lavage cytospins with Oil red O (Chapter 4) and the staining of endobronchial biopsies with perilipin (Chapter 5) was performed by Dr. Jie Zhu. The multiplex assay (Chapter 7) was performed by Dr. Christos Rossios. The copyright of this thesis rests with the author and is made available under a Creative Commons Attribution Non-Commercial No Derivatives licence. Researchers are free to copy, distribute or transmit the thesis on the condition that they attribute it, that they do not use it for commercial purposes and that they do not alter, transform or build upon it. For any reuse or redistribution, researchers must make clear to others the licence terms of this work. Signed………………………………… David Gibeon 2 Abstract Obesity is a risk factor for the development of asthma and plays a role in disease control, severity and airway inflammation. -
Pedro Valero Mora Universitat De València I Have Worn Many Hats
DYNAMIC INTERACTIVE GRAPHICS PEDRO VALERO MORA UNIVERSITAT DE VALÈNCIA I HAVE WORN MANY HATS • Degree in Psycology • Phd on Human Computer Interaction (HCI): Formal Methods for Evaluation of Interfaces • Teaching Statistics in the Department of Psychology since1990, Full Professor (Catedrático) in 2012 • Research interest in Statistical Graphics, Computational Statistics • Comercial Packages (1995-) Statview, DataDesk, JMP, Systat, SPSS (of course) • Non Comercial 1998- Programming in Lisp-Stat, contributor to ViSta (free statistical package) • Book on Interactive Dynamic Graphics 2006 (with Forrest Young and Michael Friendly). Wiley • Editor of two special issues of the Journal of Statistical Software (User interfaces for R and the Health of Lisp-Stat) • Papers, conferences, seminars, etc. DYNAMIC-INTERACTIVE GRAPHICS • Working on this topic since mid 90s • Other similar topics are visualization, computer graphics, etc. • They are converging in the last few years • I see three periods in DIG • Special hardware • Desktop computers • The internet...and beyond • This presentation will make a review of the History of DIG and will draw lessons from its evolution 1. THE SPECIAL HARDWARE PERIOD • Tukey's Prim 9 • Tukey was not the only one, in 1988 a book summarized the experiences of many researchers on this topic • Lesson#1: Hire a genius and give him unlimited resources, it always works • Or not... • Great ideas but for limited audience, not only because the cost but also the complexity… 2. DESKTOP COMPUTERS • About 1990, the audience augments...macintosh users • Many things only possible previously for people with deep pockets were now possible for…the price of a Mac • Not cheap but affordable • Several packages with a graphical user interface: • Commercial: Statview, DataDesk, SuperANOVA (yes super), JMP, Systat… • Non Commercial: Lisp-Stat, ViSta, XGobi, MANET.. -
Análisis Y Proceso De Datos Aplicado a La Psicología ---Práctica Con
Análisis y proceso de datos aplicado a la Psicología -----Práctica con ordenador----- Primera sesión de contenidos: El paquete estadístico SPSS: Descripción general y aplicación al proceso de datos Profs.: J. Gabriel Molina María F. Rodrigo Documento PowerPoint de uso exclusivo para los alumnos matriculados en la asignatura y con los profesores arriba citados. No está permitida la distribución o utilización no autorizada de este documento. El paquete estadístico SPSS: Descripción general y aplicación al proceso de datos. Contenidos: 1 El paquete estadístico SPSS: aspectos generales y descripción del funcionamiento. 2 Proceso de datos con SPSS: introducción, edición y almacenamiento de archivos de datos. 1.1 Estructura general: barra de menús, ventanas, barras de herramientas, barra de estado... (1) Programas orientados al análisis de datos : los paquetes estadísticos (BMDP, R, S-PLUS, DataDesk, Jump, Minitab, SAS, Statgraphics, Statview, Systat, ViSta...) (2) Puesta en marcha del programa SPSS Inicio >> Programas >> SPSS for Windows >> SPSS 11.0 para Windows (3) Abrir el archivo de datos ‘demo.sav’ Menú Archivo >> Abrir >> Datos... (C:) / Archivos de Programas / SPSS / tutorial / sample files / 1.2 Introducción a la utilización de SPSS: un recorrido por las funciones básicas del programa. Menú ? >> Tutorial >> Libro ‘Introducción’ 1.3 Tipos de documento asociados al programa • Documentos de datos (.sav) << Editor de datos de SPSS (Documento SPSS) • Documentos de resultados (.spo) << Visor SPSS (Documento de Visor) Visualizacion de documentos de datos y de resultados (1) Abrir el fichero de resultados ‘viewertut.spo’ Menú Archivo >> Abrir >> Resultados... (C:) / Archivos de Programas / SPSS / tutorial / sample files / (2) Abrir el fichero de datos ‘Ansiedad.sav’ Menú Archivo >> Abrir >> Datos.. -
The R Project for Statistical Computing a Free Software Environment For
The R Project for Statistical Computing A free software environment for statistical computing and graphics that runs on a wide variety of UNIX platforms, Windows and MacOS OpenStat OpenStat is a general-purpose statistics package that you can download and install for free. It was originally written as an aid in the teaching of statistics to students enrolled in a social science program. It has been expanded to provide procedures useful in a wide variety of disciplines. It has a similar interface to SPSS SOFA A basic, user-friendly, open-source statistics, analysis, and reporting package PSPP PSPP is a program for statistical analysis of sampled data. It is a free replacement for the proprietary program SPSS, and appears very similar to it with a few exceptions TANAGRA A free, open-source, easy to use data-mining package PAST PAST is a package created with the palaeontologist in mind but has been adopted by users in other disciplines. It’s easy to use and includes a large selection of common statistical, plotting and modelling functions AnSWR AnSWR is a software system for coordinating and conducting large-scale, team-based analysis projects that integrate qualitative and quantitative techniques MIX An Excel-based tool for meta-analysis Free Statistical Software This page links to free software packages that you can download and install on your computer from StatPages.org Free Statistical Software This page links to free software packages that you can download and install on your computer from freestatistics.info Free Software Information and links from the Resources for Methods in Evaluation and Social Research site You can sort the table below by clicking on the column names. -
Data Preparation with SPSS
Research Skills for Psychology Majors: Everything You Need to Know to Get Started Data Preparation With SPSS his chapter reviews the general issues involving data analysis and introduces SPSS, the Statistical Package for the Social Sciences, one of the most com- Tmonly used software programs now used for data analysis. History of Data Analysis in Psychology The chapter Computers in Psychology introduced the history of psychology’s re- lationship with computers. In that chapter, we discussed the early use of the term “computer” as a person who performed computations using paper and pencil or electromechanical devices such as adding machines. Statistical analyses were initially performed by these biological computers for psychological research. Using slide rules and a variety of progressively complex machines, they performed large statistical analyses, laboriously and slowly. The legacy of this hand calculation phase could be found in statistics texts up to as late as the 1980s. Older stats books presented formulae for statistical procedures in a form primarily suitable for calculation, and much effort was spent trying to come up with calculation-friendly formulae for the most complicated analyses. The problem with this approach to formulae writing was that the computational formulae were not very effective in communicating the concepts underlying the calculations. Most modern texts use conceptual or theoretical formulae to teach the concepts and software to perform the calculations. The invention of practical computers by the 1960s brought about a huge change in statistics and in how we deal with data in psychology, and these changes have not stopped yet. Early on, programmers began writing small programs in Assembly language (can you spell p-a-i-n?) and in FORTRAN to compute individual statistical tests. -
Dissertation Submitted in Partial Satisfaction of the Requirements for the Degree Doctor of Philosophy in Statistics
University of California Los Angeles Bridging the Gap Between Tools for Learning and for Doing Statistics A dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Statistics by Amelia Ahlers McNamara 2015 c Copyright by Amelia Ahlers McNamara 2015 Abstract of the Dissertation Bridging the Gap Between Tools for Learning and for Doing Statistics by Amelia Ahlers McNamara Doctor of Philosophy in Statistics University of California, Los Angeles, 2015 Professor Robert L Gould, Co-chair Professor Fredrick R Paik Schoenberg, Co-chair Computers have changed the way we think about data and data analysis. While statistical programming tools have attempted to keep pace with these develop- ments, there is room for improvement in interactivity, randomization methods, and reproducible research. In addition, as in many disciplines, statistical novices tend to have a reduced experience of the true practice. This dissertation discusses the gap between tools for teaching statistics (like TinkerPlots, Fathom, and web applets) and tools for doing statistics (like SAS, SPSS, or R). We posit this gap should not exist, and provide some suggestions for bridging it. Methods for this bridge can be curricular or technological, although this work focuses primarily on the technological. We provide a list of attributes for a modern data analysis tool to support novices through the entire learning-to-doing trajectory. These attributes include easy entry for novice users, data as a first-order persistent object, support for a cycle of exploratory and confirmatory analysis, flexible plot creation, support for randomization throughout, interactivity at every level, inherent visual documenta- tion, simple support for narrative, publishing, and reproducibility, and flexibility ii to build extensions. -
Serial Evaluation of the SOFA Score to Predict Outcome in Critically Ill Patients
CARING FOR THE CRITICALLY ILL PATIENT Serial Evaluation of the SOFA Score to Predict Outcome in Critically Ill Patients Flavio Lopes Ferreira, MD Context Evaluation of trends in organ dysfunction in critically ill patients may help Daliana Peres Bota, MD predict outcome. Annette Bross, MD Objective To determine the usefulness of repeated measurement the Sequential Or- gan Failure Assessment (SOFA) score for prediction of mortality in intensive care unit Christian Me´lot, MD, PhD, (ICU) patients. MSciBiostat Design Prospective, observational cohort study conducted from April 1 to July 31, Jean-Louis Vincent, MD, PhD 1999. Setting A 31-bed medicosurgical ICU at a university hospital in Belgium. UTCOME PREDICTION IS IM- Patients Three hundred fifty-two consecutive patients (mean age, 59 years) admit- portant both in clinical and ted to the ICU for more than 24 hours for whom the SOFA score was calculated on administrative intensive admission and every 48 hours until discharge. care unit (ICU) manage- ⌬ Oment.1 Although outcome prediction Main Outcome Measures Initial SOFA score (0-24), -SOFA scores (differences between subsequent scores), and the highest and mean SOFA scores obtained during and measurement should not be the the ICU stay and their correlations with mortality. only measure of ICU performance, out- come prediction can be usefully ap- Results The initial, highest, and mean SOFA scores correlated well with mortality. Initial and highest scores of more than 11 or mean scores of more than 5 corre- plied to monitor the performance of an sponded to mortality of more than 80%. The predictive value of the mean score was individual ICU and possibly to com- independent of the length of ICU stay. -
On the State of Computing in Statistics Education: Tools for Learning And
On the State of Computing in Statistics Education: Tools for Learning and for Doing Amelia McNamara Smith College 1. INTRODUCTION When Rolf Biehler wrote his 1997 paper, “Software for Learning and for Doing Statistics,” some edu- cators were already using computers in their introductory statistics classes (Biehler 1997). Biehler’s paper laid out suggestions for the conscious improvement of software for statistics, and much of his vision has been realized. But, computers have improved tremendously since 1997, and statistics and data have changed along with them. It has become normative to use computers in statistics courses– the 2005 Guidelines for Assessment and Instruction in Statistics Education (GAISE) college report suggested that students “Use real data”and“Use technology for developing conceptual understanding and analyzing data”(Aliaga et al. 2005). In 2010, Deb Nolan and Duncan Temple Lang argued students should “Compute with data in the practice of statistics” (Nolan and Temple Lang 2010). Indeed, much of the hype around ‘data science’ seems to be centering around computational statistics. Donoho’s vision of ‘Greater Data Science’ is almost entirely dependent on computation (Donoho 2015). The 2016 GAISE college report updated their recommendations to “Integrate real data with a context and purpose” and “Use technology to explore concepts and analyze data” (Carver et al. 2016). So, it is clear that we need to be engaging students in statistical computing. But how? To begin, we should consider how computers are currently being used in statistics classes. Once we have a solid foundation of the current state of computation in statistics education, we can begin to dream about the future. -
Using Spss for Descriptive Analysis
USING SPSS FOR DESCRIPTIVE ANALYSIS This handout is intended as a quick overview of how you can use SPSS to conduct various simple analyses. You should find SPSS on all college-owned PCs (e.g., library), as well as in TLC 206. 1. If the Mac is in Sleep mode, press some key on the keyboard to wake it up. If the Mac is actually turned off, turn it on by pressing the button on the back of the iMac. You’ll then see the login window. With the latest changes in the Macs, you should be able to log onto the computer using your usual ID and Password. Double-click on the SPSS icon (alias), which appears at the bottom of the screen (on the Dock) and looks something like this: . You may also open SPSS by clicking on an existing SPSS data file. 2. You’ll first see an opening screen with the program’s name in a window. Then you’ll see an input window (below middle) behind a smaller window with a number of choices (below left). If you’re dealing with an existing data source, you can locate it through the default choice. The other typical option is to enter data for a new file (Type in data). 3. Assuming that you’re going to enter a new data set, you will now see a data window such as the one seen above middle. This is the typical spreadsheet format and is initially in Data View. Note that each row contains the data from one subject.