Allylic 1 ,&Strain As a Controlling Factor in Stereoselective
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Conformations of Cycloalkanes
The Conformations of Cycloalkanes Ring-containing structures are a common occurrence in organic chemistry. We must, therefore spend some time studying the special characteristics of the parent cycloalkanes. Cyclical connectivity imposes constraints on the range of motion that the atoms in rings can undergo. Cyclic molecules are thus more rigid than linear or branched alkanes because cyclic structures have fewer internal degrees of freedom (that is, the motion of one atom greatly influences the motion of the others when they are connected in a ring). In this lesson we will examine structures of the common ring structures found in organic chemistry. The first four cycloalkanes are shown below. cyclopropane cyclobutane cyclopentane cyclohexane The amount of energy stored in a strained ring is estimated by comparing the experimental heat of formation to the calculated heat of formation. The calculated heat of formation is based on the notion that, in the absence of strain, each –CH2– group contributes equally to the heat of formation, in line with the behavior found for the acyclic alkanes (i.e., open chains). Thus, the calculated heat of formation varies linearly with the number of carbon atoms in the ring. Except for the 6-membered ring, the experimental values are found to have a more positive heat of formation than the calculated value owning to ring strain. The plots of calculated and experimental enthalpies of formation and their difference (i.e., ring strain) are seen in the Figure. The 3-membered ring has about 27 kcal/mol of strain. It can be seen that the 6-membered ring possesses almost no ring strain. -
A Study of the Thermal Stability of Benzyl 2,4-Dimethyl-6
A STUDY OF THE THERMAL STABILITY OF BENZYL 2 1 4·DIMETHYL•6•PROPENYLPEENYL ETHER by RONALD JENE DUPZIK A THESIS submitted to OREGON STATE COLLEGE in partial fulfillment ot the requirements tor the degree ot MASTER OF SCIENCE June 1958 APPEOYED I Redacted for Privacy tarogl,rtr Frofrlter of 0rnt In 0hrrgr of, I{aJor Redacted for Privacy Chrlrnen of Drprntmat of Shontrtrf Redacted for Privacy Ghelrura of Bahool &adurtc 0omlttm Redacted for Privacy Deur of 0mdu*tr $rhoel Drtc thrrtr lr prrrontrd Ausust 7, 1957 Sypcd by l{*y ldrnr 'l'o M;y Mothez in memory ot My Father ACKNOWLEDGMENT The author wishes to expreaa hia apprecia tion to Dr. Elliot N. Marvell whose help and guidance has made this work possible. Thanks are given to Dr. B. E. Christensen and Dr . c. s. Pease who have so graciously helped in Dr. Marvell's absence. To Miss Isabelle Forbusoh for her patience and help in the preparation of this manuscript. And, to the Martinez Research Laboratory ot the Shell Oil Company for the infrared and ultraviolet spectral analysis of the new compounds. TABLE OF CONTENTS Pa!e INTRODUCTION • • • • • • • • • • • • • • • • • • 1 HISTORICAL • • • • • • • • • • • . •. • • • • • • 3 DISCUSSION • • • • • • • • • • • • • • • • • • • • 16 EXPERIMENTAL • • • • • • • • • • • • • • • • • • 29 Synthesis A • • • • • • 29 Synthesis B • • • • • • • • • • • • • • • 31 Rearrangement and Thermal Stability • • • • • 37 SUMMARY. • • • • • • • • • • • • • 40 BI BLIOGRAPHY • • • • • • • • • • • • • • • • • • • 41 LIST OF FIGURES Figure 1 • • • " • • • • • • • • • • -
Allicin in Blood.Pdf
European Journal of Medicinal Chemistry 45 (2010) 1912–1918 Contents lists available at ScienceDirect European Journal of Medicinal Chemistry journal homepage: http://www.elsevier.com/locate/ejmech Original article Reaction mechanisms of allicin and allyl-mixed disulfides with proteins and small thiol molecules Talia Miron a,*, Irving Listowsky b, Meir Wilchek a a Department of Biological Chemistry, Weizmann Institute of Science, Rehovot 76100, Israel b Department of Biochemistry, Albert-Einstein College of Medicine, Bronx, NY, USA article info abstract Article history: Allylsulfides from garlic are chemopreventive agents. Entering cells they are expected to initially interact Received 15 October 2009 with glutathione. Accordingly, reaction mechanisms of the product, S-allylthio-glutathione, with model Received in revised form proteins and thiols were analyzed in cell free systems. With glutathionyl, cysteinyl or captopril repre- 14 January 2010 senting S-allyl aliphatic adducts, the reaction with sulfhydryl groups resulted in mixed disulfide Accepted 15 January 2010 mixtures, formed by both, S-allyl and aliphatic moieties. Available online 21 January 2010 To improve conventional prodrug treatment of blood pressure, cancer and intestinal inflammation S-allylthio prodrugs, such as S-allylthio-6-mercaptopurine and S-allylthio-captopril were synthesized. Keywords: Allicin Synergistic activities of the 2 constituents, as well as increased cell permeability allow for efficient in vivo Glutathione activity. Upon reaction of these derivatives with glutathione, S-allylthio-glutathione is formed, while S-Allylthio-mixed disulfide 6-mercaptopurine is the leaving group. Excess cellular glutathione enables several cycles of sulfhydryl- Prodrug disulfide exchange reactions to occur, extending the hybrid drug’s pharmacodynamics. Mechanism of action Ó 2010 Elsevier Masson SAS. -
Comparing Models for Measuring Ring Strain of Common Cycloalkanes
The Corinthian Volume 6 Article 4 2004 Comparing Models for Measuring Ring Strain of Common Cycloalkanes Brad A. Hobbs Georgia College Follow this and additional works at: https://kb.gcsu.edu/thecorinthian Part of the Chemistry Commons Recommended Citation Hobbs, Brad A. (2004) "Comparing Models for Measuring Ring Strain of Common Cycloalkanes," The Corinthian: Vol. 6 , Article 4. Available at: https://kb.gcsu.edu/thecorinthian/vol6/iss1/4 This Article is brought to you for free and open access by the Undergraduate Research at Knowledge Box. It has been accepted for inclusion in The Corinthian by an authorized editor of Knowledge Box. Campring Models for Measuring Ring Strain of Common Cycloalkanes Comparing Models for Measuring R..ing Strain of Common Cycloalkanes Brad A. Hobbs Dr. Kenneth C. McGill Chemistry Major Faculty Sponsor Introduction The number of carbon atoms bonded in the ring of a cycloalkane has a large effect on its energy. A molecule's energy has a vast impact on its stability. Determining the most stable form of a molecule is a usefol technique in the world of chemistry. One of the major factors that influ ence the energy (stability) of cycloalkanes is the molecule's ring strain. Ring strain is normally viewed as being directly proportional to the insta bility of a molecule. It is defined as a type of potential energy within the cyclic molecule, and is determined by the level of "strain" between the bonds of cycloalkanes. For example, propane has tl1e highest ring strain of all cycloalkanes. Each of propane's carbon atoms is sp3-hybridized. -
Today's Class Will Focus on the Conformations and Energies of Cycloalkanes
Name ______________________________________ Today's class will focus on the conformations and energies of cycloalkanes. Section 6.4 of the text provides an introduction. 1 Make a model of cyclopentane. Use the 2-piece "lockable" bond connectors — these rotate more easily than the smaller ones. You may need to twist them to "lock" so that they don't pop apart. The text shows two conformations of this ring — the envelope and the half-chair. Why is cyclopentane non-planar? The two conformations are below. In the envelope, 4 Cs are in a plane; in the half-chair 3 Cs are in a plane. Th first conformer is easy. To get your model to look like the second one, start with a planar ring, keep the "front" 3 Cs in the plane, and twist the "back" C–C bond so that one C goes above that plane and the other goes below. Add Hs to each of these structures — no wedges and dashes here — these are "perspective" drawings (like the drawings of chair cyclohexane rings on p 197). Just use your model and sketch the Hs where they appear to be. fast If we were to replace one H in each of these conformers with a methyl group, what do you think would be the most favorable position for it? Circle the one H on each structure above that you would replace with a CH3. In general, what happens to the ring C–C–C angles when a ring goes from planar to non-planar? Lecture outline Structures of cycloalkanes — C–C–C angles if planar: 60° 90° 108° 120° actual struct: planar |— slightly |— substantially non-planar —| non-planar —> A compound is strained if it is destabilized by: abnormal bond angles — van der Waals repulsions — eclipsing along σ-bonds — A molecule's strain energy (SE) is the difference between the enthalpy of formation of the compound of interest and that of a hypothetical strain-free compound that has the same atoms connected in exactly the same way. -
Mechanism and Selectivity of Rhodium-Catalyzed 1:2 Coupling Of
Article pubs.acs.org/JACS Terms of Use Mechanism and Selectivity of Rhodium-Catalyzed 1:2 Coupling of Aldehydes and Allenes Genping Huang, Marcin Kalek, and Fahmi Himo* Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, SE-106 91 Stockholm, Sweden *S Supporting Information ABSTRACT: The rhodium-catalyzed highly regioselective 1:2 coupling of aldehydes and allenes was investigated by means of density functional theory calculations. Full free energy profiles were calculated, and several possible reaction pathways were evaluated. It is shown that the energetically most plausible catalytic cycle is initiated by oxidative coupling of the two allenes, which was found to be the rate-determining step of the overall reaction. Importantly, Rh−allyl complexes that are able to adopt both η3 and η1 configurations were identified as key intermediates present throughout the catalytic cycle with profound implications for the selectivity of the reaction. The calculations reproduced and rationalized the experimentally observed selectivities and provided an explanation for the remarkable alteration in the product distribution when the catalyst precursor is changed from [RhCl(nbd)]2 (nbd = norbornadiene) to complexes containing noncoordinating counterions ([Rh(cod)2X]; X = OTf, BF4,PF6; cod = 1,5-cyclooctadiene). It turns out that the overall selectivity of the reaction is controlled by a combination of the inherent selectivities of several of the elementary steps and that both the mechanism and the nature of the selectivity-determining steps change when the catalyst is changed. 1. INTRODUCTION comes from the laboratory of Murakami and consists of a 1:2 6 Rhodium(I) complexes are well-established catalysts for three- coupling of aldehydes and allenes (Scheme 2b). -
Cycloalkanes, Cycloalkenes, and Cycloalkynes
CYCLOALKANES, CYCLOALKENES, AND CYCLOALKYNES any important hydrocarbons, known as cycloalkanes, contain rings of carbon atoms linked together by single bonds. The simple cycloalkanes of formula (CH,), make up a particularly important homologous series in which the chemical properties change in a much more dramatic way with increasing n than do those of the acyclic hydrocarbons CH,(CH,),,-,H. The cyclo- alkanes with small rings (n = 3-6) are of special interest in exhibiting chemical properties intermediate between those of alkanes and alkenes. In this chapter we will show how this behavior can be explained in terms of angle strain and steric hindrance, concepts that have been introduced previously and will be used with increasing frequency as we proceed further. We also discuss the conformations of cycloalkanes, especially cyclo- hexane, in detail because of their importance to the chemistry of many kinds of naturally occurring organic compounds. Some attention also will be paid to polycyclic compounds, substances with more than one ring, and to cyclo- alkenes and cycloalkynes. 12-1 NOMENCLATURE AND PHYSICAL PROPERTIES OF CYCLOALKANES The IUPAC system for naming cycloalkanes and cycloalkenes was presented in some detail in Sections 3-2 and 3-3, and you may wish to review that ma- terial before proceeding further. Additional procedures are required for naming 446 12 Cycloalkanes, Cycloalkenes, and Cycloalkynes Table 12-1 Physical Properties of Alkanes and Cycloalkanes Density, Compounds Bp, "C Mp, "C diO,g ml-' propane cyclopropane butane cyclobutane pentane cyclopentane hexane cyclohexane heptane cycloheptane octane cyclooctane nonane cyclononane "At -40". bUnder pressure. polycyclic compounds, which have rings with common carbons, and these will be discussed later in this chapter. -
Total Synthesis of Malformin C, an Inhibitor of Bleomycin- Induced G2
J. Antibiot. 61(5): 297–302, 2008 THE JOURNAL OF ORIGINAL ARTICLE ANTIBIOTICS Total Synthesis of Malformin C, an Inhibitor of Bleomycin- Induced G2 Arrest Yasuhiro Kojima, Toshiaki Sunazuka, Kenichiro Nagai, Khachatur Julfakyan, Takashi Fukuda, Hiroshi Tomoda, Satoshi O¯ mura Received: April 14, 2008 / Accepted: May 3, 2008 © Japan Antibiotics Research Association Abstract Total synthesis of a fungal cyclic peptide, Jurkat cells with IC50 values of 480 nM and 0.9 nM, malformin C, recently rediscovered as a G2 checkpoint respectively [2]. Malformin A1 is a bicyclic pentapeptide inhibitor was completed. Our synthesis involved a containing one L-isoleucine, one D-leucine, one L-valine, convergent approach with respect to a linear pentapeptide, and two D-cysteines, while malformin C has L-leucine cyclization, and oxidative disulfide formation. instead of L-isoleucine. Interestingly, this slight structural difference of the side-chains has an influence on the Keywords total synthesis, malformin C, G2 checkpoint inhibitory activity. Consequently, malformin C is a inhibitor, anti-cancer reagent, cyclic peptide, disulfide promising candidate as a potentiator of anti-cancer agents. Although malformins are also known to show a variety of activities such as inducing root curvatures and Introduction malformations in plants, antibacterial activity and enhanced fibrinolytic activity [3ϳ6], the interesting bioactivity of Spontaneous and chemical damage to DNA induces signal malformin C, as well as its bicyclic structure with a transduction pathways called checkpoints, which delay cell disulfide-bond bridge, prompted us to study the synthesis cycle progression and repair of DNA [1]. DNA damage in of this class of cyclic peptides. Herein, we describe a normal human cells can be repaired in both the G1 and G2 synthesis of malformin C. -
Recent Progress in the Synthetic Assembly of 2-Cyclopentenones
REVIEW ▌1 Recentreview Progress in the Synthetic Assembly of 2-Cyclopentenones David2-Cyclopentenone J. Synthesis Aitken,*a Hendrik Eijsberg,a,b Angelo Frongia,b Jean Ollivier,a Pier Paolo Pirasb a Laboratoire de Synthèse Organique & Méthodologie, ICMMO (CNRS UMR 8182), Université Paris Sud, 15 rue Georges Clemenceau, 91045 Orsay cedex, France Fax +33(1)69156278; E-mail: [email protected] b Dipartimento di Scienze Chimiche e Geologiche, Università degli studi di Cagliari, Complesso Universitario di Monserrato, S.S. 554, Bivio per Sestu, 09042 Monserrato, Cagliari, Italy Received: 09.07.2013; Accepted after revision: 21.08.2013 considerable number of ways in which the target ring sys- Abstract: An overview of the most important synthetic strategies currently available for the preparation of cyclopent-2-enones is pre- tem can be created from acyclic precursors, in either inter- sented and illustrated with recent applications. molecular or intramolecular mode. Most of the possible disconnection strategies have been examined, and it is im- 1 Introduction portant to recognize that for any given target 2-cyclopen- 2 Multicomponent Ring Assembly tenone, there may be several convenient approaches 3 Cyclizations available. The main approaches for ring construction are 4 Transformations of Existing Cyclic Systems summarized graphically in Figure 1. 5 Miscellaneous Methods O (4+1) O O (3+2) (3+2) coupling 6 Conclusions 1 1 1 5 5 2 5 2 2 RCM Key words: cyclopentenones, cyclization, carbocycles, ring clo- (4+1) (3+2) Rautenstrauch 4 3 4 3 4 3 aldol-type annulation sure, rearrangement, annulation (2+2+1) PKR Nazarov (3+2) Figure 1 The main ring-construction strategies for 2-cyclopente- none synthesis, showing the atom connectivities made during ring as- 1 Introduction sembly (left and center) and cyclization approaches (right). -
TOX-48: Allyl Acetate (CASRN 591-87-7), Allyl Alcohol (CASRN
National Toxicology Program Toxicity Report Series Number 48 NTP Technical Report on the Comparative Toxicity Studies of Allyl Acetate, Allyl Alcohol, and Acrolein (CAS Nos. 591-87-7, 107-18-6, and 107-02-8) Administered by Gavage to F344/N Rats and B6C3F1 Mice July 2006 National Institutes of Health Public Health Service U.S. Department of Health and Human Services FOREWORD The National Toxicology Program (NTP) is an interagency program within the Public Health Service (PHS) of the Department of Health and Human Services (HHS) and is headquartered at the National Institute of Environmental Health Sciences of the National Institutes of Health (NIEHS/NIH). Three agencies contribute resources to the program: NIEHS/NIH, the National Institute for Occupational Safety and Health of the Centers for Disease Control and Prevention (NIOSH/CDC), and the National Center for Toxicological Research of the Food and Drug Administration (NCTR/FDA). Established in 1978, the NTP is charged with coordinating toxicological testing activities, strengthening the science base in toxicology, developing and validating improved testing methods, and providing information about potentially toxic substances to health regulatory and research agencies, scientific and medical communities, and the public. The Toxicity Study Report series began in 1991. The studies described in the Toxicity Study Report series are designed and conducted to characterize and evaluate the toxicologic potential of selected substances in laboratory animals (usually two species, rats and mice). Substances selected for NTP toxicity studies are chosen primarily on the basis of human exposure, level of production, and chemical structure. The interpretive conclusions presented in the Toxicity Study Reports are based only on the results of these NTP studies. -
Are the Most Well Studied of All Ring Systems. They Have a Limited Number Of, Almost Strain Free, Conformations
Chem 201/Beauchamp Topic 6, Conformations (cyclohexanes) 1 Cyclohexanes Cyclohexane rings (six atom rings in general) are the most well studied of all ring systems. They have a limited number of, almost strain free, conformations. Because of their well defined conformational shapes, they are frequently used to study effects of orientation or steric effects when studying chemical reactions. Additionally, six atom rings are the most commonly encountered rings in nature. Cyclohexane structures do not choose to be flat. Slight twists at each carbon atom allow cyclohexane rings to assume much more comfortable conformations, which we call chair conformations. (Chairs even sound comfortable.) The chair has an up and down shape all around the ring, sort of like the zig-zag shape seen in straight chains (...time for models!). C C C C C C lounge chair - used to kick back and relax while you study your organic chemistry chair conformation Cyclohexane rings are flexible and easily allow partial rotations (twists) about the C-C single bonds. There is minimal angle strain since each carbon can approximately accommodate the 109o of the tetrahedral shape. Torsional strain energy is minimized in chair conformations since all groups are staggered relative to one another. This is easily seen in a Newman projection perspective. An added new twist to our Newman projections is a side-by-side view of parallel single bonds. If you look carefully at the structure above or use your model, you should be able to see that a parallel relationship exists for all C-C bonds across the ring from one another. -
Intramolecular Ene Reactions of Functionalised Nitroso Compounds
INTRAMOLECULAR ENE REACTIONS OF FUNCTIONALISED NITROSO COMPOUNDS A Thesis Presented by Sandra Luengo Arratta In Partial Fulfilment of the Requirements for the Award of the Degree of DOCTOR OF PHILOSOPHY OF UNIVERSITY COLLEGE LONDON Christopher Ingold Laboratories Department of Chemistry University College London 20 Gordon Street London WC1H 0AJ July 2010 DECLARATION I Sandra Luengo Arratta, confirm that the work presented in this thesis is my own. Where work has been derived from other sources, I confirm that this has been indicated in the thesis. ABSTRACT This thesis concerns the generation of geminally functionalised nitroso compounds and their subsequent use in intramolecular ene reactions of types I and II, in order to generate hydroxylamine derivatives which can evolve to the corresponding nitrones. The product nitrones can then be trapped in the inter- or intramolecular mode by a variety of reactions, including 1,3-dipolar cycloadditions, thereby leading to diversity oriented synthesis. The first section comprises the chemistry of the nitroso group with a brief discussion of the current methods for their generation together with the scope and limitations of these methods for carrying out nitroso ene reactions, with different examples of its potential as a powerful synthetic method to generate target drugs. The second chapter describes the results of the research programme and opens with the development of methods for the generation of functionalised nitroso compounds from different precursors including oximes and nitro compounds, using a range of reactants and conditions. The application of these methods in intramolecular nitroso ene reactions is then discussed. Chapter three presents the conclusions which have been drawn from the work presented in chapter two, and provides suggestions for possible directions of this research in the future.