Random Number Generation in Gretl
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Sagemath and Sagemathcloud
Viviane Pons Ma^ıtrede conf´erence,Universit´eParis-Sud Orsay [email protected] { @PyViv SageMath and SageMathCloud Introduction SageMath SageMath is a free open source mathematics software I Created in 2005 by William Stein. I http://www.sagemath.org/ I Mission: Creating a viable free open source alternative to Magma, Maple, Mathematica and Matlab. Viviane Pons (U-PSud) SageMath and SageMathCloud October 19, 2016 2 / 7 SageMath Source and language I the main language of Sage is python (but there are many other source languages: cython, C, C++, fortran) I the source is distributed under the GPL licence. Viviane Pons (U-PSud) SageMath and SageMathCloud October 19, 2016 3 / 7 SageMath Sage and libraries One of the original purpose of Sage was to put together the many existent open source mathematics software programs: Atlas, GAP, GMP, Linbox, Maxima, MPFR, PARI/GP, NetworkX, NTL, Numpy/Scipy, Singular, Symmetrica,... Sage is all-inclusive: it installs all those libraries and gives you a common python-based interface to work on them. On top of it is the python / cython Sage library it-self. Viviane Pons (U-PSud) SageMath and SageMathCloud October 19, 2016 4 / 7 SageMath Sage and libraries I You can use a library explicitly: sage: n = gap(20062006) sage: type(n) <c l a s s 'sage. interfaces .gap.GapElement'> sage: n.Factors() [ 2, 17, 59, 73, 137 ] I But also, many of Sage computation are done through those libraries without necessarily telling you: sage: G = PermutationGroup([[(1,2,3),(4,5)],[(3,4)]]) sage : G . g a p () Group( [ (3,4), (1,2,3)(4,5) ] ) Viviane Pons (U-PSud) SageMath and SageMathCloud October 19, 2016 5 / 7 SageMath Development model Development model I Sage is developed by researchers for researchers: the original philosophy is to develop what you need for your research and share it with the community. -
Python – an Introduction
Python { AN IntroduCtion . default parameters . self documenting code Example for extensions: Gnuplot Hans Fangohr, [email protected], CED Seminar 05/02/2004 ² The wc program in Python ² Summary Overview ² Outlook ² Why Python ² Literature: How to get started ² Interactive Python (IPython) ² M. Lutz & D. Ascher: Learning Python Installing extra modules ² ² ISBN: 1565924649 (1999) (new edition 2004, ISBN: Lists ² 0596002815). We point to this book (1999) where For-loops appropriate: Chapter 1 in LP ² ! if-then ² modules and name spaces Alex Martelli: Python in a Nutshell ² ² while ISBN: 0596001886 ² string handling ² ¯le-input, output Deitel & Deitel et al: Python { How to Program ² ² functions ISBN: 0130923613 ² Numerical computation ² some other features Other resources: ² . long numbers www.python.org provides extensive . exceptions ² documentation, tools and download. dictionaries Python { an introduction 1 Python { an introduction 2 Why Python? How to get started: The interpreter and how to run code Chapter 1, p3 in LP Chapter 1, p12 in LP ! Two options: ! All sorts of reasons ;-) interactive session ² ² . Object-oriented scripting language . start Python interpreter (python.exe, python, . power of high-level language double click on icon, . ) . portable, powerful, free . prompt appears (>>>) . mixable (glue together with C/C++, Fortran, . can enter commands (as on MATLAB prompt) . ) . easy to use (save time developing code) execute program ² . easy to learn . Either start interpreter and pass program name . (in-built complex numbers) as argument: python.exe myfirstprogram.py Today: . ² Or make python-program executable . easy to learn (Unix/Linux): . some interesting features of the language ./myfirstprogram.py . use as tool for small sysadmin/data . Note: python-programs tend to end with .py, processing/collecting tasks but this is not necessary. -
WEEK 10: FAREWELL to PYTHON... WELCOME to MAPLE! 1. a Review of PYTHON's Features During the Past Few Weeks, We Have Explored
WEEK 10: FAREWELL TO PYTHON... WELCOME TO MAPLE! 1. A review of PYTHON’s features During the past few weeks, we have explored the following aspects of PYTHON: • Built-in types: integer, long integer, float, complex, boolean, list, se- quence, string etc. • Operations on built-in types: +, −, ∗, abs, len, append, etc. • Loops: N = 1000 i=1 q = [] while i <= N q.append(i*i) i += 1 • Conditional statements: if x < y: min = x else: min = y • Functions: def fac(n): if n==0 then: return 1 else: return n*fac(n-1) • Modules: math, turtle, etc. • Classes: Rational, Vector, Polynomial, Polygon, etc. With these features, PYTHON is a powerful tool for doing mathematics on a computer. In particular, the use of modules makes it straightforward to add greater functionality, e.g. GL (3D graphics), NumPy (numerical algorithms). 2. What about MAPLE? MAPLE is really designed to be an interactive tool. Nevertheless, it can also be used as a programming language. It has some of the basic facilities available in PYTHON: Loops; conditional statements; functions (in the form of “procedures”); good graphics and some very useful additional modules called “packages”: • Built-in types: long integer, float (arbitrary precision), complex, rational, boolean, array, sequence, string etc. • Operations on built-in types: +, −, ∗, mathematical functions, etc. • Loops: 1 2 WEEK 10: FAREWELL TO PYTHON... WELCOME TO MAPLE! Table 1. Some of the most useful MAPLE packages Name Description Example DEtools Tools for differential equations exactsol(ode,y) linalg Linear Algebra gausselim(A) plots Graphics package polygonplot(p,axes=none) stats Statistics package random[uniform](10) N := 1000 : q := array(1..N) : for i from 1 to N do q[i] := i*i : od : • Conditional statements: if x < y then min := x else min := y fi: • Functions: fac := proc(n) if n=0 then return 1 else return n*fac(n-1) fi : end proc : • Packages: See Table 1. -
A Note on Random Number Generation
A note on random number generation Christophe Dutang and Diethelm Wuertz September 2009 1 1 INTRODUCTION 2 \Nothing in Nature is random. number generation. By \random numbers", we a thing appears random only through mean random variates of the uniform U(0; 1) the incompleteness of our knowledge." distribution. More complex distributions can Spinoza, Ethics I1. be generated with uniform variates and rejection or inversion methods. Pseudo random number generation aims to seem random whereas quasi random number generation aims to be determin- istic but well equidistributed. 1 Introduction Those familiars with algorithms such as linear congruential generation, Mersenne-Twister type algorithms, and low discrepancy sequences should Random simulation has long been a very popular go directly to the next section. and well studied field of mathematics. There exists a wide range of applications in biology, finance, insurance, physics and many others. So 2.1 Pseudo random generation simulations of random numbers are crucial. In this note, we describe the most random number algorithms At the beginning of the nineties, there was no state-of-the-art algorithms to generate pseudo Let us recall the only things, that are truly ran- random numbers. And the article of Park & dom, are the measurement of physical phenomena Miller (1988) entitled Random generators: good such as thermal noises of semiconductor chips or ones are hard to find is a clear proof. radioactive sources2. Despite this fact, most users thought the rand The only way to simulate some randomness function they used was good, because of a short on computers are carried out by deterministic period and a term to term dependence. -
Package 'Randtoolbox'
Package ‘randtoolbox’ January 31, 2020 Type Package Title Toolbox for Pseudo and Quasi Random Number Generation and Random Generator Tests Version 1.30.1 Author R port by Yohan Chalabi, Christophe Dutang, Petr Savicky and Di- ethelm Wuertz with some underlying C codes of (i) the SFMT algorithm from M. Mat- sumoto and M. Saito, (ii) the Knuth-TAOCP RNG from D. Knuth. Maintainer Christophe Dutang <[email protected]> Description Provides (1) pseudo random generators - general linear congruential generators, multiple recursive generators and generalized feedback shift register (SF-Mersenne Twister algorithm and WELL generators); (2) quasi random generators - the Torus algorithm, the Sobol sequence, the Halton sequence (including the Van der Corput sequence) and (3) some generator tests - the gap test, the serial test, the poker test. See e.g. Gentle (2003) <doi:10.1007/b97336>. The package can be provided without the rngWELL dependency on demand. Take a look at the Distribution task view of types and tests of random number generators. Version in Memoriam of Diethelm and Barbara Wuertz. Depends rngWELL (>= 0.10-1) License BSD_3_clause + file LICENSE NeedsCompilation yes Repository CRAN Date/Publication 2020-01-31 10:17:00 UTC R topics documented: randtoolbox-package . .2 auxiliary . .3 coll.test . .4 coll.test.sparse . .6 freq.test . .8 gap.test . .9 get.primes . 11 1 2 randtoolbox-package getWELLState . 12 order.test . 12 poker.test . 14 pseudoRNG . 16 quasiRNG . 22 rngWELLScriptR . 26 runifInterface . 27 serial.test . 29 soboltestfunctions . 31 Index 33 randtoolbox-package General remarks on toolbox for pseudo and quasi random number generation Description The randtoolbox-package started in 2007 during an ISFA (France) working group. -
Practical Estimation of High Dimensional Stochastic Differential Mixed-Effects Models
Practical Estimation of High Dimensional Stochastic Differential Mixed-Effects Models Umberto Picchinia,b,∗, Susanne Ditlevsenb aDepartment of Mathematical Sciences, University of Durham, South Road, DH1 3LE Durham, England. Phone: +44 (0)191 334 4164; Fax: +44 (0)191 334 3051 bDepartment of Mathematical Sciences, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark Abstract Stochastic differential equations (SDEs) are established tools to model physical phenomena whose dynamics are affected by random noise. By estimating parameters of an SDE intrin- sic randomness of a system around its drift can be identified and separated from the drift itself. When it is of interest to model dynamics within a given population, i.e. to model simultaneously the performance of several experiments or subjects, mixed-effects mod- elling allows for the distinction of between and within experiment variability. A framework to model dynamics within a population using SDEs is proposed, representing simultane- ously several sources of variation: variability between experiments using a mixed-effects approach and stochasticity in the individual dynamics using SDEs. These stochastic differ- ential mixed-effects models have applications in e.g. pharmacokinetics/pharmacodynamics and biomedical modelling. A parameter estimation method is proposed and computational guidelines for an efficient implementation are given. Finally the method is evaluated using simulations from standard models like the two-dimensional Ornstein-Uhlenbeck (OU) and the square root models. Keywords: automatic differentiation, closed-form transition density expansion, maximum likelihood estimation, population estimation, stochastic differential equation, Cox-Ingersoll-Ross process arXiv:1004.3871v2 [stat.CO] 3 Oct 2010 1. INTRODUCTION Models defined through stochastic differential equations (SDEs) allow for the represen- tation of random variability in dynamical systems. -
Introduction to GNU Octave
Introduction to GNU Octave Hubert Selhofer, revised by Marcel Oliver updated to current Octave version by Thomas L. Scofield 2008/08/16 line 1 1 0.8 0.6 0.4 0.2 0 -0.2 -0.4 8 6 4 2 -8 -6 0 -4 -2 -2 0 -4 2 4 -6 6 8 -8 Contents 1 Basics 2 1.1 What is Octave? ........................... 2 1.2 Help! . 2 1.3 Input conventions . 3 1.4 Variables and standard operations . 3 2 Vector and matrix operations 4 2.1 Vectors . 4 2.2 Matrices . 4 1 2.3 Basic matrix arithmetic . 5 2.4 Element-wise operations . 5 2.5 Indexing and slicing . 6 2.6 Solving linear systems of equations . 7 2.7 Inverses, decompositions, eigenvalues . 7 2.8 Testing for zero elements . 8 3 Control structures 8 3.1 Functions . 8 3.2 Global variables . 9 3.3 Loops . 9 3.4 Branching . 9 3.5 Functions of functions . 10 3.6 Efficiency considerations . 10 3.7 Input and output . 11 4 Graphics 11 4.1 2D graphics . 11 4.2 3D graphics: . 12 4.3 Commands for 2D and 3D graphics . 13 5 Exercises 13 5.1 Linear algebra . 13 5.2 Timing . 14 5.3 Stability functions of BDF-integrators . 14 5.4 3D plot . 15 5.5 Hilbert matrix . 15 5.6 Least square fit of a straight line . 16 5.7 Trapezoidal rule . 16 1 Basics 1.1 What is Octave? Octave is an interactive programming language specifically suited for vectoriz- able numerical calculations. -
Regression Models by Gretl and R Statistical Packages for Data Analysis in Marine Geology Polina Lemenkova
Regression Models by Gretl and R Statistical Packages for Data Analysis in Marine Geology Polina Lemenkova To cite this version: Polina Lemenkova. Regression Models by Gretl and R Statistical Packages for Data Analysis in Marine Geology. International Journal of Environmental Trends (IJENT), 2019, 3 (1), pp.39 - 59. hal-02163671 HAL Id: hal-02163671 https://hal.archives-ouvertes.fr/hal-02163671 Submitted on 3 Jul 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License International Journal of Environmental Trends (IJENT) 2019: 3 (1),39-59 ISSN: 2602-4160 Research Article REGRESSION MODELS BY GRETL AND R STATISTICAL PACKAGES FOR DATA ANALYSIS IN MARINE GEOLOGY Polina Lemenkova 1* 1 ORCID ID number: 0000-0002-5759-1089. Ocean University of China, College of Marine Geo-sciences. 238 Songling Rd., 266100, Qingdao, Shandong, P. R. C. Tel.: +86-1768-554-1605. Abstract Received 3 May 2018 Gretl and R statistical libraries enables to perform data analysis using various algorithms, modules and functions. The case study of this research consists in geospatial analysis of Accepted the Mariana Trench, a hadal trench located in the Pacific Ocean. -
Towards a Fully Automated Extraction and Interpretation of Tabular Data Using Machine Learning
UPTEC F 19050 Examensarbete 30 hp August 2019 Towards a fully automated extraction and interpretation of tabular data using machine learning Per Hedbrant Per Hedbrant Master Thesis in Engineering Physics Department of Engineering Sciences Uppsala University Sweden Abstract Towards a fully automated extraction and interpretation of tabular data using machine learning Per Hedbrant Teknisk- naturvetenskaplig fakultet UTH-enheten Motivation A challenge for researchers at CBCS is the ability to efficiently manage the Besöksadress: different data formats that frequently are changed. Significant amount of time is Ångströmlaboratoriet Lägerhyddsvägen 1 spent on manual pre-processing, converting from one format to another. There are Hus 4, Plan 0 currently no solutions that uses pattern recognition to locate and automatically recognise data structures in a spreadsheet. Postadress: Box 536 751 21 Uppsala Problem Definition The desired solution is to build a self-learning Software as-a-Service (SaaS) for Telefon: automated recognition and loading of data stored in arbitrary formats. The aim of 018 – 471 30 03 this study is three-folded: A) Investigate if unsupervised machine learning Telefax: methods can be used to label different types of cells in spreadsheets. B) 018 – 471 30 00 Investigate if a hypothesis-generating algorithm can be used to label different types of cells in spreadsheets. C) Advise on choices of architecture and Hemsida: technologies for the SaaS solution. http://www.teknat.uu.se/student Method A pre-processing framework is built that can read and pre-process any type of spreadsheet into a feature matrix. Different datasets are read and clustered. An investigation on the usefulness of reducing the dimensionality is also done. -
An Introduction to Maple
A little bit of help with Maple School of Mathematics and Applied Statistics University of Wollongong 2008 A little bit of help with Maple Welcome! The aim of this manual is to provide you with a little bit of help with Maple. Inside you will find brief descriptions on a lot of useful commands and packages that are commonly needed when using Maple. Full worked examples are presented to show you how to use the Maple commands, with different options given, where the aim is to teach you Maple by example – not by showing the full technical detail. If you want the full detail, you are encouraged to look at the Maple Help menu. To use this manual, a basic understanding of mathematics and how to use a computer is assumed. While this manual is based on Version 10.01 of Maple on the PC platform on Win- dows XP, most of it should be applicable to other versions, platforms and operating systems. This handbook is built upon the original version of this handbook by Maureen Edwards and Alex Antic. Further information has been gained from the Help menu in Maple itself. If you have any suggestions or comments, please email them to Grant Cox ([email protected]). Table of contents : Index 1/81 Contents 1 Introduction 4 1.1 What is Maple? ................................... 4 1.2 Getting started ................................... 4 1.3 Operators ...................................... 7 1.3.1 The Ditto Operator ............................. 9 1.4 Assign and unassign ................................ 9 1.5 Special constants .................................. 11 1.6 Evaluation ...................................... 11 1.6.1 Digits ................................... -
Gretl User's Guide
Gretl User’s Guide Gnu Regression, Econometrics and Time-series Allin Cottrell Department of Economics Wake Forest university Riccardo “Jack” Lucchetti Dipartimento di Economia Università Politecnica delle Marche December, 2008 Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.1 or any later version published by the Free Software Foundation (see http://www.gnu.org/licenses/fdl.html). Contents 1 Introduction 1 1.1 Features at a glance ......................................... 1 1.2 Acknowledgements ......................................... 1 1.3 Installing the programs ....................................... 2 I Running the program 4 2 Getting started 5 2.1 Let’s run a regression ........................................ 5 2.2 Estimation output .......................................... 7 2.3 The main window menus ...................................... 8 2.4 Keyboard shortcuts ......................................... 11 2.5 The gretl toolbar ........................................... 11 3 Modes of working 13 3.1 Command scripts ........................................... 13 3.2 Saving script objects ......................................... 15 3.3 The gretl console ........................................... 15 3.4 The Session concept ......................................... 16 4 Data files 19 4.1 Native format ............................................. 19 4.2 Other data file formats ....................................... 19 4.3 Binary databases .......................................... -
Automated Likelihood Based Inference for Stochastic Volatility Models H
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Institutional Knowledge at Singapore Management University Singapore Management University Institutional Knowledge at Singapore Management University Research Collection School Of Economics School of Economics 11-2009 Automated Likelihood Based Inference for Stochastic Volatility Models H. Skaug Jun YU Singapore Management University, [email protected] Follow this and additional works at: https://ink.library.smu.edu.sg/soe_research Part of the Econometrics Commons Citation Skaug, H. and YU, Jun. Automated Likelihood Based Inference for Stochastic Volatility Models. (2009). 1-28. Research Collection School Of Economics. Available at: https://ink.library.smu.edu.sg/soe_research/1151 This Working Paper is brought to you for free and open access by the School of Economics at Institutional Knowledge at Singapore Management University. It has been accepted for inclusion in Research Collection School Of Economics by an authorized administrator of Institutional Knowledge at Singapore Management University. For more information, please email [email protected]. Automated Likelihood Based Inference for Stochastic Volatility Models Hans J. SKAUG , Jun YU November 2009 Paper No. 15-2009 ANY OPINIONS EXPRESSED ARE THOSE OF THE AUTHOR(S) AND NOT NECESSARILY THOSE OF THE SCHOOL OF ECONOMICS, SMU Automated Likelihood Based Inference for Stochastic Volatility Models¤ Hans J. Skaug,y Jun Yuz October 7, 2008 Abstract: In this paper the Laplace approximation is used to perform classical and Bayesian analyses of univariate and multivariate stochastic volatility (SV) models. We show that imple- mentation of the Laplace approximation is greatly simpli¯ed by the use of a numerical technique known as automatic di®erentiation (AD).