NCCMA Vegetation Condition Report
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Vegetation and Floristics of Naree and Yantabulla
Vegetation and Floristics of Naree and Yantabulla Dr John T. Hunter June 2015 23 Kendall Rd, Invergowrie NSW, 2350 Ph. & Fax: (02) 6775 2452 Email: [email protected] A Report to the Bush Heritage Australia i Vegetation of Naree & Yantabulla Contents Summary ................................................................................................................ i 1 Introduction ....................................................................................................... 1 1.1 Objectives ....................................................................................... 1 2 Methodology ...................................................................................................... 2 2.1 Site and species information ......................................................... 2 2.2 Data management ......................................................................... 3 2.3 Multivariate analysis ..................................................................... 3 2.4 Significant vascular plant taxa within the study area ............... 5 2.5 Mapping ......................................................................................... 5 2.6 Mapping caveats ............................................................................ 8 3 Results ................................................................................................................ 9 3.1 Site stratification ........................................................................... 9 3.2 Floristics ...................................................................................... -
Disentangling Sources of Gene Tree Discordance in Phylotranscriptomic Datasets: a Case
bioRxiv preprint doi: https://doi.org/10.1101/794370; this version posted October 7, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 1 Disentangling Sources of Gene Tree Discordance in Phylotranscriptomic Datasets: A Case 2 Study from Amaranthaceae s.l. 3 4 Diego F. Morales-Briones1*, Gudrun Kadereit2, Delphine T. Tefarikis2, Michael J. Moore3, 5 Stephen A. Smith4, Samuel F. Brockington5, Alfonso Timoneda5, Won C. Yim6, John C. 6 Cushman6, Ya Yang1* 7 8 1 Department of Plant and Microbial Biology, University of Minnesota-Twin Cities, 1445 9 Gortner Avenue, St. Paul, MN 55108, USA 10 2 Institut für Molekulare Physiologie, Johannes Gutenberg-Universität Mainz, D-55099, Mainz, 11 Germany 12 3 Department of Biology, Oberlin College, Science Center K111, 119 Woodland Street, Oberlin, 13 OH 44074-1097, USA 14 4 Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University 15 Avenue, Ann Arbor, MI 48109-1048, USA 16 5 Department of Plant Sciences, University of Cambridge, Tennis Court Road, Cambridge, CB2 17 3EA, United Kingdom 18 6 Department of Biochemistry and Molecular Biology, University of Nevada, Reno, NV, 89577, 19 USA 20 21 * Correspondence to be sent to: Diego F. Morales-Briones and Ya Yang. Department of Plant and 22 Microbial Biology, University of Minnesota, 1445 Gortner Avenue, St. Paul, MN 55108, USA, 23 Telephone: +1 612-625-6292 (YY) Email: [email protected]; [email protected] bioRxiv preprint doi: https://doi.org/10.1101/794370; this version posted October 7, 2019. -
Vegetation and Soil Assessment of Selected Waterholes of the Diamantina and Warburton Rivers, South Australia, 2014-2016
Vegetation and Soil Assessment of Selected Waterholes of the Diamantina and Warburton Rivers, South Australia, 2014-2016 J.S. Gillen June 2017 Report to the South Australian Arid Lands Natural Resources Management Board Fenner School of Environment & Society, Australian National University, Canberra Disclaimer The South Australian Arid Lands Natural Resources Management Board, and its employees do not warrant or make any representation regarding the use, or results of use of the information contained herein as to its correctness, accuracy, reliability, currency or otherwise. The South Australian Arid Lands Natural Resources Management Board and its employees expressly disclaim all liability or responsibility to any person using the information or advice. © South Australian Arid Lands Natural Resources Management Board 2017 This report may be cited as: Gillen, J.S. Vegetation and soil assessment of selected waterholes of the Diamantina and Warburton Rivers, South Australia, 2014-16. Report by Australian National University to the South Australian Arid Lands Natural Resources Management Board, Pt Augusta. Cover images: Warburton River April 2015; Cowarie Crossing Warburton River May 2016 Copies of the report can be obtained from: Natural Resources Centre, Port Augusta T: +61 (8) 8648 5300 E: [email protected] Vegetation and Soil Assessment 2 Contents 1 Study Aims and Funding Context 6 2 Study Region Characteristics 7 2.1 Location 7 2.2 Climate 7 3 The Diamantina: dryland river in an arid environment 10 3.1 Methodology 11 3.2 Stages 12 -
Site Planners Guide for the CLLMM Region
Site Planners Guide for the CLLMM Region Developed By Sacha Jellinek and Thai Te 1 Contents Site Planners Guide for the CLLMM Region ...................................................................... 1 About this Guide ................................................................................................................ 4 Ecosystems Types ............................................................................................................ 4 Suggested Field Equipment ............................................................................................... 6 Site Planners Key .............................................................................................................. 7 1. Coastal Dunes ...................................................................................................... 11 2. South East ............................................................................................................ 12 3. Mt Lofty Ranges .................................................................................................... 13 4. Lower Lakes Terrestrial......................................................................................... 15 Ecosystem Descriptions .................................................................................................. 16 1. Eucalyptus fasciculosa (Pink Gum) Woodland ...................................................... 16 2. Eucalyptus cosmophylla (Cup Gum) & E. baxteri (Brown Stringy Bark) Woodland over Heath .................................................................................................................. -
Floodplain Management Plan for the Barwon-Darling Valley Floodplain 2017
Floodplain Management Plan for the Barwon-Darling Valley Floodplain 2017 As at 14 January 2018 None This Plan ceases to have effect on 30 June 2027--see cl 3. Part 1 – Introduction Part 10 of this Plan allows for amendments to be made to this Part. 1 Name of Plan This Plan is the Floodplain Management Plan for the Barwon-Darling Valley Floodplain 2017 ("this Plan"). 2 Nature and status of Plan (1) This Plan is made under section 50 of the Water Management Act 2000 ("the Act"). (2) This Plan is a plan for floodplain management and generally deals with the matters set out in sections 29 and 30 of the Act, as well as other sections of the Act. 1 Where a provision of this Plan is made under another section of the Act, the section is referred to in the notes to this Plan. 2 Rural Floodplain Management Plans: draft Technical Manual for plans developed under the Water Management Act 2000 ("the Technical Manual") details the methodologies used to develop this Plan. 3 Commencement This Plan commences on 29 June 2017 and is required to be published on the NSW legislation website. In accordance with section 43 of the Act, this Plan will have effect for 10 years from 1 July 2017. 4 Application of Plan This Plan applies to the area within the Barwon-Darling Valley Floodplain shown on the Plan Map called Floodplain Management Plan Map (FMP015_Version 1), Floodplain Management Plan for the Barwon-Darling Valley Floodplain 2017 ("the Plan Map"). 1 The Barwon-Darling Valley Floodplain is declared to be a "floodplain" under the Water Management (General) Regulation 2011. -
Evolutionary Convergence of C4 Photosynthesis: a Case Study in the Nyctaginaceae
fpls-11-578739 October 28, 2020 Time: 15:36 # 1 HYPOTHESIS AND THEORY published: 02 November 2020 doi: 10.3389/fpls.2020.578739 Evolutionary Convergence of C4 Photosynthesis: A Case Study in the Nyctaginaceae Roxana Khoshravesh1,2†, Matt Stata1†, Shunsuke Adachi1,3†, Tammy L. Sage1† and Rowan F. Sage1*† 1 Department of Ecology and Evolutionary Biology, The University of Toronto, Toronto, ON, Canada, 2 Department of Biology, The University of New Mexico, Albuquerque, NM, United States, 3 Institute of Global Innovation Research, Tokyo University of Agriculture and Technology, Fuchu, Japan Edited by: Tingshuang Yi, C4 photosynthesis evolved over 65 times, with around 24 origins in the eudicot order Kunming Institute of Botany, Chinese Caryophyllales. In the Caryophyllales family Nyctaginaceae, the C4 pathway is known in Academy of Sciences, China three genera of the tribe Nyctagineae: Allionia, Okenia and Boerhavia. Phylogenetically, Reviewed by: Isabel Larridon, Allionia and Boerhavia/Okenia are separated by three genera whose photosynthetic Royal Botanic Gardens, Kew, pathway is uncertain. To clarify the distribution of photosynthetic pathways in the United Kingdom Sidonie Bellot, Nyctaginaceae, we surveyed carbon isotope ratios of 159 species of the Nyctaginaceae, Royal Botanic Gardens, Kew, along with bundle sheath (BS) cell ultrastructure, leaf gas exchange, and C4 pathway United Kingdom biochemistry in five species from the two C4 clades and closely related C3 genera. All *Correspondence: species in Allionia, Okenia and Boerhavia are C4, while no C4 species occur in any Rowan F. Sage [email protected] other genera of the family, including three that branch between Allionia and Boerhavia. †ORCID: This demonstrates that C4 photosynthesis evolved twice in Nyctaginaceae. -
Disentangling Sources of Gene Tree Discordance in Phylogenomic Datasets: Testing
bioRxiv preprint doi: https://doi.org/10.1101/794370; this version posted March 13, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 1 Disentangling Sources of Gene Tree Discordance in Phylogenomic Datasets: Testing 2 Ancient Hybridizations in Amaranthaceae s.l. 3 4 Diego F. Morales-Briones1*, Gudrun Kadereit2, Delphine T. Tefarikis2, Michael J. Moore3, 5 Stephen A. Smith4, Samuel F. Brockington5, Alfonso Timoneda5, Won C. Yim6, John C. 6 Cushman6, Ya Yang1* 7 8 1 Department of Plant and Microbial Biology, University of Minnesota-Twin Cities, 1445 9 Gortner Avenue, St. Paul, MN 55108, USA 10 2 Institut für Molekulare Physiologie, Johannes Gutenberg-Universität Mainz, D-55099, Mainz, 11 Germany 12 3 Department of Biology, Oberlin College, Science Center K111, 119 Woodland Street, Oberlin, 13 OH 44074-1097, USA 14 4 Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University 15 Avenue, Ann Arbor, MI 48109-1048, USA 16 5 Department of Plant Sciences, University of Cambridge, Tennis Court Road, Cambridge, CB2 17 3EA, United Kingdom 18 6 Department of Biochemistry and Molecular Biology, University of Nevada, Reno, NV, 89577, 19 USA 20 21 * Correspondence to be sent to: Diego F. Morales-Briones and Ya Yang. Department of Plant and 22 Microbial Biology, University of Minnesota, 1445 Gortner Avenue, St. Paul, MN 55108, USA, 23 Telephone: +1 612-625-6292 (YY) Email: [email protected]; [email protected] bioRxiv preprint doi: https://doi.org/10.1101/794370; this version posted March 13, 2020. -
Plants in Remediating Salinity-Affected Agricultural Landscapes
Published Online on 21 November 2016 Proc Indian Natn Sci Acad 83 No. 1 March 2017 pp. 51-66 Printed in India. DOI: 10.16943/ptinsa/2016/48857 Review Article Plants in Remediating Salinity-affected Agricultural Landscapes MOHAMMAD S I BHUIYAN1, ANANTANARAYANAN RAMAN1,* and DENNIS S HODGKINS Charles Sturt University, P O Box 883, Orange, NSW 2800, Australia 1Graham Centre for Agricultural Innovation, Wagga Wagga, NSW 2650, Australia (Received on 05 May 2016; Accepted on 02 August 2016) Soil salinity is a widespread problem throughout the world. Salinization makes productive land unproductive. This problem can be addressed by non-plant based, environment-friendly (e.g., leaching of salts, chemical amelioration of soils, structural engineering modifications) and plant-based remediation (e.g., phytoremediation). Non-plant based remediation provides rapid outcomes. However, they have several inherent problems, viz., they are energy and cost intensive, need to be site specific, and are usually unsuitable in managing vast landscapes. In contrast, plant-based remediation, viz., phytoremediation, is a slower process, but is economical and environment-friendly. Phytoremediation is applied in areas that not only suffer salinity, but also in areas that include heavy-metal leachates such as mine areas and in landscapes that suffer sodicity. Further to improving soils by bringing them to near-natural conditions, phytoremediation, a worthwhile environment-friendly effort, provides many additional benefits such as improving nutrient availability in the restored soil. Keeping these in view, this article attempts to provide a comprehensive overview of salinity and its effect on plants, salinity-tolerance mechanisms in selected plants,various plant-based salinity remediation and management practices, such as phytoextraction, phytostabilization, phytotransformation, phytovolatilization, and rhizodegradation, and their contextual relevance. -
Microsatellite Development Via Next-Generation Sequencing
Microsatellite Development via Next-Generation Sequencing in Acacia stenophylla (Fabaceae) and Duma florulenta (Polygonaceae): Two Ecologically Important Plant Species of Australian Dryland Floodplains Bruce F. Murray1, Michael A. Reid1 and Shu-Biao Wu2 1Geography and Planning, School of Humanities Arts and Social Sciences, University of New England, Armidale, NSW, 2351, Australia. 2School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia. Corresponding Author: Bruce Murray Email address: [email protected] Postal address: Earth Studies Building C02, Geography and Planning, University of New England, Armidale, NSW, 2351, Australia. 1 PeerJ Preprints | https://doi.org/10.7287/peerj.preprints.27027v1 | CC BY 4.0 Open Access | rec: 10 Jul 2018, publ: 10 Jul 2018 1 Microsatellite Development via Next-Generation Sequencing 2 in Acacia stenophylla (Fabaceae) and Duma florulenta 3 (Polygonaceae): Two Ecologically Important Plant Species of 4 Australian Dryland Floodplains 5 6 Abstract 7 8 Duma florulenta and Acacia stenophylla are two ecologically important but 9 understudied species that naturally occur on the floodplains and riverbanks of Australia’s 10 arid and semi-arid river systems. This paper describes the discovery and characterization 11 of 12 and 13 polymorphic microsatellite markers for D. florulenta and A. stenophylla 12 respectively. The number of alleles per locus for D. florulenta ranged from 2-12 with an 13 average of 6.1. Across all samples, observed and expected heterozygosities ranged from 14 0.026 to 0.784 and 0.026 to 0.824, respectively and mean polymorphic information 15 content was equal to 0.453. For A. stenophylla, the number of alleles per locus ranged 16 between 2 and 8 with an overall mean of 4.8. -
Vegetation Recovery in Inland Wetlands: an Australian Perspective
Vegetation recovery in inland wetlands: an Australian perspective J. Roberts, M.T. Casanova, K. Morris, P. Papas May 2017 Arthur Rylah Institute for Environmental Research Technical Report Series Number 270 Acknowledgements This project was funded by the Water and Catchments Group (WCG) of the Department of Environment, Land, Water and Planning, Victoria (DELWP). Tamara van Polanen Petel and Janet Holmes (WCG, DELWP), and Freya Thomas and Claire Moxham (Arthur Rylah Institute for Environmental Research, DELWP) are thanked for reviewing the draft and providing valuable feedback. David Meagher (Zymurgy Consulting) is thanked for editing the report. Authors Jane Roberts1, Michelle Casanova2, Kay Morris3 and Phil Papas3 1 Ecological Consultant, PO Box 6191, O’Connor, Australian Capital Territory 2602 2 Charophyte Services, PO Lake Bolac, Victoria 3351 3 Arthur Rylah Institute for Environmental Research, 123 Brown Street, Heidleberg, Victoria 3084 Citation Roberts, J., Casanova, M.T., Morris, K. and Papas, P. (2017). Vegetation recovery in inland wetlands: an Australian perspective. Arthur Rylah Institute for Environmental Research. Technical Report Series No. 270. Department of Environment, Land, Water and Planning, Heidelberg, Victoria. Photo credit Southern Cane Grass Eragrostis infecunda establishing on exposed bed of former Lake Mokoan, at Winton Wetlands in October 2016. (Dylan Osler, via Jane Roberts) © The State of Victoria Department of Environment, Land, Water and Planning, May 2017 This work is licensed under a Creative Commons Attribution 4.0 International licence. You are free to re-use the work under that licence, on the condition that you credit the State of Victoria as author. The licence does not apply to any images, photographs or branding, including the Victorian Coat of Arms, the Victorian Government logo and the Department of Environment, Land, Water and Planning (DELWP) logo and the Arthur Rylah Institute logo. -
From Cacti to Carnivores: Improved Phylotranscriptomic Sampling And
Article Type: Special Issue Article RESEARCH ARTICLE INVITED SPECIAL ARTICLE For the Special Issue: Using and Navigating the Plant Tree of Life Short Title: Walker et al.—Phylotranscriptomic analysis of Caryophyllales From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Caryophyllales Joseph F. Walker1,13, Ya Yang2, Tao Feng3, Alfonso Timoneda3, Jessica Mikenas4,5, Vera Hutchison4, Caroline Edwards4, Ning Wang1, Sonia Ahluwalia1, Julia Olivieri4,6, Nathanael Walker-Hale7, Lucas C. Majure8, Raúl Puente8, Gudrun Kadereit9,10, Maximilian Lauterbach9,10, Urs Eggli11, Hilda Flores-Olvera12, Helga Ochoterena12, Samuel F. Brockington3, Michael J. Moore,4 and Stephen A. Smith1,13 Manuscript received 13 October 2017; revision accepted 4 January 2018. 1 Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann Arbor, MI 48109-1048 USA 2 Department of Plant and Microbial Biology, University of Minnesota-Twin Cities, 1445 Gortner Avenue, St. Paul, MN 55108 USA 3 Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK 4 Department of Biology, Oberlin College, Science Center K111, 119 Woodland Street, Oberlin, OH 44074-1097 USA 5 Current address: USGS Canyonlands Research Station, Southwest Biological Science Center, 2290 S West Resource Blvd, Moab, UT 84532 USA 6 Institute of Computational and Mathematical Engineering (ICME), Stanford University, 475 Author Manuscript Via Ortega, Suite B060, Stanford, CA, 94305-4042 USA This is the author manuscript accepted for publication and has undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. -
SARDI Report Series Is an Administrative Report Series Which Has Not Been Reviewed Outside the Department and Is Not Considered Peer-Reviewed Literature
Monitoring the response of littoral and floodplain vegetation to weir pool raising - 2014 Susan Gehrig, Kate Frahn and Jason Nicol SARDI Publication No. F2015/000390-1 SARDI Research Report Series No. 844 SARDI Aquatics Sciences PO Box 120 Henley Beach SA 5022 June 2015 Gehrig, S. L. et al. (2015) Weir Pool Raising Vegetation surveys 2014-15 Monitoring the response of littoral and floodplain vegetation to weir pool raising - 2014 Susan Gehrig, Kate Frahn and Jason Nicol SARDI Publication No. F2015/000390-1 SARDI Research Report Series No. 844 June 2015 II Gehrig, S. L. et al. (2015) Weir Pool Raising Vegetation surveys 2014-15 This publication may be cited as: Gehrig, S. L., Frahn, K. and Nicol, J. M. (2015). Monitoring the response of littoral and floodplain vegetation to weir pool raising - 2014. South Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2015/000390-1. SARDI Research Report Series No. 844. 74pp. South Australian Research and Development Institute SARDI Aquatic Sciences 2 Hamra Avenue West Beach SA 5024 Telephone: (08) 8207 5400 Facsimile: (08) 8207 5406 http://www.pir.sa.gov.au/research DISCLAIMER The authors warrant that they have taken all reasonable care in producing this report. The report has been through the SARDI internal review process, and has been formally approved for release by the Research Chief, Aquatic Sciences. Although all reasonable efforts have been made to ensure quality, SARDI does not warrant that the information in this report is free from errors or omissions. SARDI does not accept any liability for the contents of this report or for any consequences arising from its use or any reliance placed upon it.