President's Report 2010–2011

PRESIDENT’S REPORT Enter Report 2010–2011 UCC President’s Report 2010–2011

Foreword UCC at a Glance Academic Developments CONTENTS Student Experience Teaching and Learning Research and Innovation Events

COLLEGE REPORTS Arts, Celtic Studies The President’s Report and Social Sciences is produced annually by the office of media Business and Law and communications, University College Cork. Medicine and Health If you would like to give feedback on this issue, Science, Engineering please contact the editor at [email protected] or call: and Food Science 00 353 (0)21 4902812 Cork University Press Editor: Nancy Hawkes Buildings and Estates Photography: Andrew Bradley Finance Neil Danton F2 Photography UCC Governing Body Maxwell Photography 2010–2011 Paul Moran/Sports File John Sheehan Photography Tomás Tyner, UCC APPENDIX Institutional Research Design: Alan O’Shea (aosdesign) Information System (IRIS)

UCC President’s Report 2010–2011 | Foreword

Welcome to the President’s Report 2010–2011 3

4 University College Cork is Ireland’s foremost research- In such an environment, UCC has successfully positioned led university. Recently we became Ireland’s only five- itself to minimise the impact of the current economic re- 5 star university according to the prestigious Quacquarelli alities on the quality of services offered to our students. 9 Symonds, (QS), World University Rankings 2011. The Even more importantly, the university has put in place news was a source of immense pride, both to myself structures that actively facilitate innovation, creativity 19 and the whole university community. and an entrepreneurial approach, to further enhance the 25 entire student experience. The results are evident in every The five-star accolade is only the latest ‘feather’ in our page of this report, and are proven, not only in our ability 33 cap: the university has once again improved its place in to attract the highest calibre of students, but also in our the QS World University Rankings, positioning us in the impressive retention rates, and our ongoing commitment COLLEGE REPORTS top two per cent of universities worldwide. UCC was to facilitate access to higher education for all. placed 181st in the world, and was the only Irish institution to record an improvement during this period. The Dedication on the part of our staff and student body 38 result represents a rise of 205 places over the course of ensures that the university continues to enjoy such an the past six years. esteemed international profile, a profile consistent with 48 the standards we set for ourselves, and with our over- 56 The Sunday Times named UCC Irish University of the arching ambition – to excel in all that we do. For their Year 2011. This means we are the only Irish institution dedication to realising this ambition, I extend my sincere to have won this accolade three times. Significantly, em- thanks to the entire university community. 65 ployers around the world rank UCC graduates in the top 100 for employability, while we continue to maintain our position as a leader in the international diversity of our 76 staff, achieving 60th position in this category. 80 Given the prevailing economic circumstances, 2010- 84 2011 was another challenging year. Exchequer funding was once again reduced, placing further pressure on all Dr Michael Murphy, President, UCC 86 aspects of the university’s activities. Our focus on non- Exchequer sources of funding, as well as rethinking and refining delivery mechanisms, has been encouraging and helps ensure that the university maintains a sustainable financial position both now and in the foreseeable 88 future. Nevertheless, the challenge has not abated, and will require ongoing attention.

UCC President’s Report 2010–2011

RESEARCH FUNDING (EURO)

EXCHEQUER FUNDING 3 UCC AT A GLANCE 3,370,203 Department of Agriculture, 4 Fisheries and Food 7,624,325 Enterprise Ireland 5 STUDENTS 960,889 Health Boards 2,559,758 Higher Education Authority 9 19,772 Students enrolled in 2010-2011 4,074,949 Health Research Board 12,398 Full-time undergraduate 19 25,459,631 Science Foundation Ireland 327 Part-time undergraduate 644,442 Teagasc 25 133 Distance learning 436,954 Tyndall National Institute 3,691 Postgraduate 33 3,619,493 Miscellaneous 1,134 Research PhD 12,048,014 Government Departments 164 Research Masters COLLEGE REPORTS 1,406 Full-time mature students 60,798,659 Total 1,130 Visiting students NON-EXCHEQUER FUNDING 38 2,800 International students 8,331,638 European Union 48 749 Students registered with disabilities in UCC 1,780,228 Foundation-funded research 56 1,430,058 Foreign Industry 90% Primary degree graduates who 1,069,142 Foreign Research Institute entered employment or further 388,932 Irish-funded research 65 studies 2,861,014 Industry 47% Postgraduates went directly 352,233 Industry/EI Projects into employment 76 1,604,702 Miscellaneous 1,256 Invest Northern Ireland 80 STAFF 12,131 Other funded projects 746 Academic 84 17,831,334 Total 1,139 Non-academic 795 Research 78,629,993 Total Research Funding 86 2,680 Total

INCOME (EURO) €66m State grant 88 €105.2m Student fees €78.6m Research €20.8m Other

UCC President’s Report 2010–2011 | Academic Developments 2010-2011

COLLEGE REPORTS

76 80 ACADEMIC DEVELOPMENTS 84 2010-2011

UCC President’s Report 2010–2011 | Academic Developments 2010-2011

New Degree Programmes College of Business and Law Undergraduate: A number of new undergraduate and postgraduate programmes 3 have been introduced for entry in 2011-2012 in response to student • BSc (accounting studies) • BSc (business economics) 4 needs, employer demand, and the requirements of professional bodies. Several programmes now have opportunities for progression and • BSc (financial economics) 5 exit points along particular award pathways, providing flexibility in • Diploma in accounting studies delivery method and opportunities for students to learn at a pace • Diploma in business economics 9 that meets their particular needs. • Diploma in financial economics 19 These courses have been developed for students from partner Chinese universities with whom UCC signs a bilateral agreement 25 College of Arts, Celtic Studies and under statute 263 of the National University of Ireland (NUI). • Certificate in creative and digital marketing (ACE). 33 Social Sciences Postgraduate: Undergraduate: COLLEGE REPORTS • LLM (child and family law) • Certificate in arts offering archaeology and history. • LLM (international human rights law and public policy) • MSc (innovation, commercialisation and entrepreneurship). 38 Postgraduate: • PhD (digital arts and humanities) Accreditation of Irish Management Institute (IMI) programmes to 48 • MA (applied psychology) approved in 2009-2010, be awarded as UCC programmes 56 implemented in 2011-2012 • MSc (organisational behaviour) • MA (contemporary religions) approval in 2009-2010, • Postgraduate certificate in management practice* within the master

implemented in 2011-2012 of business suite. 65 • MRes (master of research) • Higher Diploma in facilitating inclusion (disability studies) *Note in relation to programme nomenclature. The postgraduate certificate 76 Adult Continuing Education (ACE). is marketed by IMI under the title ‘IMI Diploma’ which is recognised by UCC as the brand name to be used by IMI for marketing purposes alone. UCC 80 has accredited the IMI Diploma as academically equivalent to a Postgraduate 84 Certificate (Level 9 minor award) on the National Framework of Qualifica- tions (NFQ).

86 College of Medicine and Health

Undergraduate: • BDS (Hons) graduate entry to dentistry for implementation in 88 2012-2013 • BSc (Ordinary) (speech and hearing sciences) alternative exit award for students registered for BSc Hons speech and language therapy.

UCC President’s Report 2010–2011 | Academic Developments 2010-2011

Postgraduate: • MSc (advanced audiology) • MSc (end of life healthcare ethics) 3 • MSc (older person rehabilitation) • Postgraduate Diploma in advanced audiology 4 • Postgraduate Diploma in older person rehabilitation 5 • Postgraduate Certificate in older person rehabilitation.

9 College of Science, Engineering 19 Adjunct Appointments 2010-2011 and Food Science 25 New Appointments: Undergraduate: 33 • Diploma in civil and environmental engineering studies Professor Michael Berndt as adjunct professor in the college • Diploma in electrical and electronic engineering studies COLLEGE REPORTS of medicine and health for a three-year period commencing These programmes have been developed for students from 1 November 2010. partner Chinese universities with whom UCC signed a bilateral agreement under statute 263 of the NUI. 38 Frank Collins as adjunct senior lecturer in the college of business and law, for a three-year period commencing 1 November 2010. 48 Postgraduate: • PhD (engineering science) students have the option of completing Matthew Elderfield as adjunct professor in the college of business 56 additional taught modules to be awarded the Postgraduate Certifi- and law, department of accounting, finance and information cate in innovation, commercialisation and entrepreneurship systems, for a three-year period commencing 1 March 2011. 65 • Master of architecture • MSc by research in architecture Dr Timothy Guinee as adjunct professor in the college of science, • Higher Diploma in mathematical and statistical risk modelling. engineering and food science, school of food and nutritional 76 sciences, for a three year period commencing 1 January 2011. 80 Margaret Humphreys as adjunct lecturer in the college of science 84 engineering and food science, for a three-year period commencing 1 November 2010. 86 Professor Mary Kellett as adjunct professor in the college of arts, celtic studies and social sciences, for a three-year period commencing 1 October 2010.

88 Dick Lehane as adjunct professor in the college of business and law, for a three-year period commencing 1 October 2010.

Dr David F. McCarthy as adjunct professor in the college of business and law, for a three-year period commencing 1 October 2010.

UCC President’s Report 2010–2011 | Academic Developments 2010-2011

5 Professor Bryan McCullick appointed as adjunct professor in the Renewals 9 college of arts, celtic studies and social sciences, for a three-year period commencing 1 October 2010. as adjunct professor in the college of business 19 Michael Buckley and law, for a further three-year period commencing 1 October 25 Dr Vincent Power as adjunct professor in the college of business 2010. and law for a three-year period commencing 1 October 2010. 33 Dr Kevin James as adjunct professor in the college of science, Dr David Reid as adjunct professor in the college science, engi- engineering and food science, for a further three-year period com- COLLEGE REPORTS neering and food science, for a three-year period commencing mencing 1 October 2010. 1 October 2010. Lord Lester of Herne Hill QC as adjunct professor in the college 38 Dr Harald Rutter as adjunct professor in the college of medicine of business and law, faculty of law, for a further three-year period and health, department of epidemiology and public health, for a commencing 1 March 2011. 48 three-year period commencing 1 March 2011. 56 Judge Bryan M. E. McMahon as adjunct professor in the college Professor Timothy Unwin as adjunct professor in the college of of business and law, faculty of law, for a further three-year period arts celtic studies and social sciences, for a three-year period com- commencing 1 March 2011. 65 mencing 1 November 2010. Dr Peter Miovic as adjunct professor in the college of business and 76 law, for a further three-year period commencing 1 October 2010.

80 Dr Paul Ross as adjunct professor in the college of science, engineering and food science, department of microbiology/APC, for a 84 further three-year period commencing 1 March 2011.

86 Professor Kamal Sabra as adjunct professor in the college of medicine and health, school of pharmacy, for a further three year period commencing 1 March 2011.

Brendan Tuohy as adjunct professor in the college of business and 88 law, for a further three-year period commencing 1 October 2010.

Dr Peter Weedle renewed as adjunct professor in the college of medicine and health, school of pharmacy, for a further three-year period from 1 May 2011.

UCC President’s Report 2010–2011 | The Student Experience

COLLEGE REPORTS

76 80 THE STUDENT EXPERIENCE 84

UCC President’s Report 2010–2011 | The Student Experience

COLLEGE REPORTS Introduction

38 Ongoing budgetary cutbacks continued to be a major challenge in 48 sustaining the student experience during 2010-2011. The need to reduce staff numbers under the employment control mechanism re- 56 quired a particular effort on the part of all staff in order to maintain student services. Achieving even greater efficiency in the way we conduct business was a major focus of the Student Support Services 65 Management Group (SSSG) during the year.

76 Planning for UCC’s new student ‘Hub’, a key project in the University Strategic Plan 2009-2012, was a priority during 2010-2011. The Hub 80 will enable a holistic educational experience by locating: student Admissions Office 84 learning spaces; student development and employability services; an integrated student administration centre; and the main university The admissions office, recognising the important role that parents/ reception in one central physical location on campus. guardians and family members play in supporting students through- 86 out their university experience, welcomed over 500 family members TheStrategic Plan for Sport and Physical Activity was also completed to campus in September 2010. The Open Door Welcome for family and endorsed by university management during the year. The plan will and friends of first-year students was part of a student orientation shape the development of sport and physical activity at the university programme which also included presentations, workshop and cam- over the coming years by focusing on: physical activity and general pus tours throughout a busy week of activities. 88 wellness for all students; a new high performance programme for elite athletes; and optimising facilities for sport and physical activity.

Highlights of the enhancements made to student services during the year, across different areas of the student experience, include:

10 UCC President’s Report 2010–2011 | The Student Experience

UCC PLUS+

• UCC PLUS+ launched Gateway to sUCCess – The Destination of UCC PLUS+ Graduates in December 2010. The report 3 examined the career destinations of students supported by UCC PLUS+ who graduated between 2001 and 2008. The report 4 demonstrated success at both undergraduate and postgraduate level, which was reflected directly in success in the labour 5 market. Highlights of that report included: 9 – The retention rate of UCC PLUS+ students matched that of the mainstream student cohort 19 – 95 per cent of UCC PLUS+ graduates achieved an honours 25 degree: 15.1 per cent achieved first class honours award – Since 2004, UCC PLUS+ students have outperformed, and 33 maintained a higher examination success rate, than other UCC students COLLEGE REPORTS – 72 per cent of the respondents had engaged with, or were still • The Higher Education Access Route (HEAR) scheme, aimed engaging in, further postgraduate studies. at increasing the number of students from socioeconomically disadvantaged backgrounds progressing on to university, was 38 • The Professor Fluffy University Adventure programme was incorporated into the CAO application system for 2010-2011 piloted in four primary schools in the north west of Cork City. admissions. UCC admitted 145 students under this scheme 48 The innovative programme tells primary children and their during this period. 56 families about the educational opportunities available to them. The programme uses the Professor Fluffy® resource activity pack, developed by the University of Liverpool, and adapted for Disability Support Service (DSS) 65 use in UCC, to raise awareness of the importance of education in improving career and life opportunities. It also fosters an • 774 students registered with the service in 2010-2011, an increase understanding of the concept of choice and demystifies the of 13 per cent on the previous year, and 47 per cent over the past 76 language of third-level education five years 80 • The DSS extended the assistive technology laboratory in the Boole Library in July 2011. The extended space includes 20 84 workstations and an assistive technology training room. The state-of-the-art facilities provide a resource, not only for 86 students with disabilities in UCC, but for all stakeholders in the field of special education and disability in the region • The DSS was awarded funding as part of a Leonardo Project titled l’Universe Emploi. The service will work in collaboration with disability services in France, Denmark, Italy and with 88 TCD to enhance the employability of final-year students with disabilities as part of the work of this project • In September 2011, the DSS developed a special orientation programme to enhance the transition experience of students with Asperger syndrome to higher education.

11 UCC President’s Report 2010–2011 | The Student Experience

Mature Student Programme

• There was an intake of 420 full-time, undergraduate mature students in 2010-2011 3 • 1,379 full-time, undergraduate mature students were registered in the university in 2010-2011 4 • Pre-entry guidance for undergraduate degree options was provided on a pilot basis 5 • A mature student information evening, held in November 2010, 9 attracted over 500 prospective students to UCC.

19 Student Health 25 33 • 18,920 consultations were provided by the student health department in 2010-2011 COLLEGE REPORTS • Over 350 consultations were provided by the department’s specialist psychiatry service to students • New workshops to help staff and peer support leaders identify • 911 students availed of 4,383 individual counselling sessions, 38 and support students with alcohol-related problems were representing 4.8 per cent of UCC student population delivered, in association with the student counselling and 48 • The uLink peer support programme was extended to support development department students with mental health difficulties 56 • Over 200 brief intervention therapy consultations were delivered • 196 trained peer support leaders met with all first-years and to support students with alcohol-related problems provided follow-up support to 16 per cent of these students

• 2,776 students completed e-PUB, an online intervention to help • 164 UCC staff members attended training on student issues with 65 students review and change their drinking habits themes such as ‘identifying and responding to distressed students.’ • Digital health-promotion presentations were made available on YouTube and promoted via Facebook 76 • The student health department won a prestigious Irish Chaplaincy 80 Healthcare Award in the ‘best use of information technology’ category for our submission, Protecting our future healthcare 84 • The Chaplaincy charity ball raised €8,000 for the Christina Noble students: an IT success story, which detailed the high levels of Foundation immunity achieved by our vaccination programme. • A programme of monthly retreats, cultural nights and heritage 86 trips were attended by hundreds of students Student Counselling and Development • The Notre Dame Glee Club Choir visited the Honan Chapel • Mindful Campus, a cross-disciplinary series of events and trainings for staff and students in mindfulness and meditation, • UCC collaborated with National University of Ireland Galway began in 2010-2011 88 (NUIG), Trinity College Dublin (TCD), and Dundalk Institute of • The new chaplaincy team for 2010-2011 is: Br Richard Hendrick, Technology (DkIT) to secure funding for the development and a Capuchin friar; Rev. John Ardis, a Church of Ireland chaplain; launch of MyMindMatters.ie, an online mental health resource Sr Patricia O’Donovan, Mercy sister; and Fr David Barrins, a for third-level students Dominican friar.

12 UCC President’s Report 2010–2011 | The Student Experience

Career Services

Students were supported in the following ways by the career First destinations of graduates of 2010: services: • 90 per cent of primary-degree graduates went into employment or further study 3 • 3,801 students consulted a career advisor • 6,911 students participated in career management and • 84 per cent of higher-degree and diploma graduates went into 4 employability skills workshops employment or further study • A number of initiatives designed to help students develop • 47 per cent of primary-degree graduates achieved starting 5 strategies for the challenging jobs market included: Career salaries over €25,000 9 Matters, a suite of six two-hours workshops in job search skills; • 62 per cent of higher-degree and diploma graduates achieved Insider Insights, a course of six employer-led workshops; and starting salaries over €25,000 with 34 per cent achieving salaries 19 Ask the Experts, 12 workshops designed to give students an over €33,000 • 85 per cent of all graduates in employment were working in 25 opportunity to meet and network with potential employers, and find out about careers in a range of sectors Ireland. 33 • Career planning workshops were developed for PhD students • 141 companies participated in recruitment fairs and ‘milk round’ COLLEGE REPORTS presentations • 1,477 job advertisements were posted on the services website, with 61,685 hits 38 • A weekly e-newsletter was launched • Social media was used to develop networks with employers and 48 to connect with students 56 • 626 work placements were organised for students.

13 UCC President’s Report 2010–2011 | The Student Experience

Sporting Success Badminton Club: • Intervarsity winners 2010-2011 was one of the most successful years for UCC sports clubs on • Munster Club winners, five-in-a-row record. Our clubs, teams and individual athletes excelled in the following • Achieved various Cork League and Munster League and Cup wins. ways: 3 Boxing Club: 4 Athletics Club: • Won five titles at the Novice intervarsities • The UCC ladies team (U23) were Cork county and Munster cross- 5 country champions Camogie Club: 9 • The UCC men’s team (U23) were Munster cross-country champions • Fresher intervarsity winners • Clare Fitzgerald won four gold medals at her first intervarsity outdoor • Senior Colleges League winners 19 track and field event in shot putt, javelin, discus and long distance throw • Ashbourne Cup finalists • Julie Brien was All-Ireland Club final winner with Killimor, Galway 25 • Sally McCarthy was County U23 cross-country champion • Barry Donovan was Munster U23 cross-country champion • Julie Brien, Susan Earner and Katrina Hayes were members of the 33 • UCC won the annual Colours cross-country event against Cork Institute Ashbourne Cup All-Star team for 2010-2011. of Technology (CIT) for the third year in a row. Canoe Club: COLLEGE REPORTS Ladies Basketball Club: • UCC were runners-up in the intervarsity competition • Intervarsity winners, three-in-a-row • Aisling Ní Ghriofa was a member of the Irish senior kayaking team. 38 • Colleges League finalists • Claire Rockall was ‘most valuable player’ (MVP) at the basketball Fencing Club: 48 intervarsity final, and, with Áine McKenna, a Colleges All-Star. Claire • Aoife O’Loughlin was an Irish Senior International. 56 and Áine were also members of Team Montenotte, Glanmire, who were Superleague finalists in 2011. Gaelic Football Club: • Sigerson Cup winners 65 • Colleges League finalists

UCC Athletics Club women’s relay team (l-r): Sally McCarthy, Representatives of winning UCC Men’s Volleyball, UCC’s Sigerson Cup squad celebrate after Sinead O’Connor, Laura Crowe and Mary Fitzgerald, who Trampoline, Ultimate Frisbee, and Rugby Clubs their win in the final competed in the Maynooth intervarsity road relay event

14 UCC President’s Report 2010–2011 | The Student Experience

• Michael Shields, Ken O’Halloran, Eoin Cotter and Sean Kiely were Hurling Club: members of the Cork team who won the All-Ireland Senior final in 2010 • Fresher All-Ireland champions • Ken O’Halloran, Peter Crowley, Eoin O’Mahony, Sean Kiely, James • Fresher ‘B’ Championship winners Fitzpatrick, Mark Collins, Kevin O’Driscoll and J.B. Spillane were • Intermediate League winners members of the Ulster Bank Rising All-Star team • Junior Championship winners 3 • Barry O’Driscoll was the March winner of the Southside Sports Star • Michael Cahill was an All-Ireland U21 and Senior All-Ireland medal 4 Award, in association with Cork International Hotel winner with Tipperary in September 2010 • Billy Morgan, UCC’s winning Sigerson Cup team coach, was the March • Philip O’Loughlin, Luke O’Farrell and Dean Brosnan were Ulster Bank 5 winner of the 96FM/Rochestown Park Hotel GAA Award Rising Stars. 9 • Kevin O’Driscoll was the March winner of the West Cork/Celtic Ross Hotel Sports Star Award. Inline Hockey Club: 19 • UCC won the first tournament in the club’s history when they defeated Golf Club: Cork, Galway and Kilkenny. 25 • Emma O’Driscoll was an Irish Senior International and Munster Senior 33 interprovincial player. She also represented Ireland at the World Student Judo Club: Games in China in August 2011 • Won 10 medals at the judo intervarsities. • Ian O’Rourke was a member of the Munster Senior interprovincial team COLLEGE REPORTS and the Irish Senior squad. Kickboxing Club: • Won 12 medals at the Irish United Tae Kwon Do Federation (IUTF) Handball Club: 38 International championships. • Ashley Prendiville was All-Ireland champion at 60 x 30 singles and 48 doubles, 40 x 20 doubles champion and intervarsity 60 x 30 champion Ladies Gaelic Football/CamogieClubs: • David Walsh was world collegiate men’s ‘A’ category winner. • Grainne Kenneally, (Waterford), was an All-Ireland finalist in junior 56 camogie and intermediate Gaelic football in 2010 • Orla Cotter and Jill Horan were members of the Inch Rovers team who 65 won the All-Ireland Senior club title in 2011.

UCC’s Tom Drinan in action in the UCC Olympic Handball Club celebrate success UCC’s Declan King in action at the European Fly Fishing Championships European University Golf Championships

15 UCC President’s Report 2010–2011 | The Student Experience

Ladies Hockey Club: Soccer Club: • Retained All-Ireland League status • Collingwood Cup winners • Miriam Crowley was an Irish Senior International • UCC’s Josh O’Shea was Man of the Match in the Collingwood Cup final • Olivia Roycroft, Kate Murphy and Ali O’Regan were among the Irish • Michael McSweeney, Rob Waters and Josh O’ Shea were among the Irish Universities selection Universities selection 3 • Ali O’Regan and Olivia Roycroft were members of the winning Munster • Josh O’Shea was awarded the February Cork City and County Sports Star 4 Senior interprovincial team. Award, by the Gresham Metropole Hotel, Cork, in association with John • Ali O’Regan was a member of the Irish ‘A’ team in June 2011 Buckley Sports, in 2011 5 • Four UCC students/graduates, Miriam Crowley, Rachael Kohler, Julia • John Caufield, UCC’s Collingwood Cup coach, won the March 9 O’Halloran and Audrey O’Flynn, were named among the Munster ‘Team Boardwalk Sports Star Award in 2011 of the Decade’. • Michael McSweeney was the March winner of the Glanmire and District 19 Monthly Sports Star Award in association with Vienna Woods Hotel. Men’s Hockey Club: 25 • Irish Trophy Cup finalists Tennis Club: 33 • Andrew Gray and Peter Catchpole were Munster Senior interprovincials. • UCC men’s second’s were intervarsity Bowl winners

Rowing Club: Trampoline Club: COLLEGE REPORTS • Justin Ryan was intervarsity Senior Single Skull champion, Irish senior • Intervarsity winners rower and member of the Irish Elite squad Ultimate Frisbee Club: 38 • Peter Hanily was a member of the Irish Elite squad • UCC were Cork Head of River winners. • Intervarsity winners in the indoor, outdoor and mixed categories 48 • Several UCC students were selected to represent Ireland at various age- Rugby Club: levels for international competitions during the summer of 2011. 56 • Retained All-Ireland League division ‘1B’ status • Junior intervarsity winners Volleyball Club: 65 • Philip Donnellan and John Ryan were selected for the Club Ireland team. • Men’s intervarsity winners.

Waterpolo Club: 76 • Ladies National Senior Cup semi-finalists. 80

UCC Rowing Club getting ready for Adrian Greaney, (team captain), with UCC Men’s Tennis Club: action at the Intervarsities the Sigerson Cup, March 2011 Tennis Bowl Intervarsity Winners

16 UCC President’s Report 2010–2011 | The Student Experience

Sports Star of the Year Awards

The university, in association with the sports and recreation Other Awards: office, bestow ten students with Sports Star Awards for Club of the Year: Ultimate Frisbee Most Improved Club of the Year: Camogie 3 excellence on the field of play. The awards are presented at an annual event sponsored by the River Lee Hotel and the Bank Club Person of the Year: Seamus Boyle (Canoe Club) 4 of Ireland. This year, the awards were presented by Dr Michael Fresher of the Year: Clare Fitzgerald (athletics) Murphy, President, UCC and Frankie Sheahan, former Irish Team of the Year: U21 Rugby (All-Ireland Club winners 2010) 5 and Munster rugby player, and UCC graduate. Event of the Year: Rowing intervarsities 9 Website of the Year: Athletics Club. The winners for 2010-2011 were: 19 Andrew Neville – Association Football Bene Merenti: Rufus Holmes – Soccer 25 Claire Rockall – Basketball Julie Brien – Camogie Denise Leahy – Camogie 33 Aoife O’Loughlin – Fencing Lisa Dundon – Trampoline Adrian Greaney - Gaelic football Sorcha Ní Riain – Rowing Donal Murray – Ultimate Frisbee COLLEGE REPORTS Michael Cahill – Hurling Miriam Crowley – Ladies Hockey Eimear Moloney – Parachute. Justin Ryan – Rowing 38 John Ryan – Rugby Jamie Blake – Tennis. 48

Intervarsity winners: UCC men’s volleyball team Archery intervarsities held in the Mardyke Arena, UCC

17 UCC President’s Report 2010–2011 | The Student Experience

Sports Scholarships and Bursaries Basketball: • Marie Breen and Hansey Sexton were members of Team Ninety four students received UCC sports scholarships ranging Montenotte Glanmire who were runners-up in the basketball over 20 sports. 15 students received Munster Council GAA Superleague final in 2011. 3 bursaries.

4 Graduate Success

5 Athletics: 9 • Ailís McSweeney was 100m National Senior champion and 60m indoor champion 19 • Orla Drumm, (1,500m National Championships – second), and 25 Laura Crowe, (800m National Championships – second), were awarded Inspirational Performance of the Year at the Athletics 33 Association Ireland Awards.

Rugby: COLLEGE REPORTS • Mike Ross achieved Heineken Cup success with Leinster and was an Irish Senior International 38 • Ronan O’Gara, Peter Stringer, Mick O’Driscoll, Denis Leamy, Donnacha Ryan, Ian Nagle, Tomas O’Leary, Stephen Archer, 48 Danny Barnes, Scott Deasy, Ivan Dineen, Denis Fogary, Jerry 56 Flannery, Tom Gleeson, Billy Holland, Denis Hurley were all members of teams competing in the Munster Magners League • Denis Hurley, Donnacha Ryan, and Ian Nagle were selected on 65 the Irish ‘A’ Wolfhounds team • Ronan O’Gara, Peter Stringer, Mick O’Driscoll, Tomas O’Leary, Jerry Flannery, Mike Ross and Denis Leamy were all members of 76 the Irish Rugby Senior squad this year. 80 Gaelic Football: 84 • Alan Quirke, Anthony Lynch, Fintan Goold, John Hayes, Kevin McMahon, Paddy Kelly and Pearse O’Neill were members of the 86 Cork All-Ireland Senior Football and National League winning teams in 2010.

Soccer: • Michael Mulconry, Dave O’Keeffe, Ken Bruton, Michael Kiernan, 88 Paul Kelleher and David Spratt, (captain), were on the squad of Avondale United who won the Football Association of Ireland Intermediate Cup in 2011. Michael McSweeney, captain of UCC’s winning Collingwood Cup team, was the March winner of the Glanmire and District Sports Star Award, pictured with Tony Murphy and Michael Foley of the Munster Senior League

18 3

COLLEGE REPORTS

76 80 TEACHING AND LEARNING 84

19 UCC President’s Report 2010–2011 | Teaching and Learning

February 2011 saw the publication of the much-anticipated National mature adults, part-time students, and those with significant work Strategy for Higher Education to 2030. UCC is well-positioned and experience but no formalised or accredited knowledge. A lack of already meeting many of the targets set by the report’s recommen- opportunity does not equate to a lack of capacity and UCC, through 3 dations. The document emphasised the importance of research-led CACE, is taking meaningful steps to encourage non-traditional adult teaching; lifelong learning; flexibility in the provision of access to learners to access, participate in, and contribute to higher education. 4 education, and also placed great emphasis on staff development. CACE facilitates its students to enter mainstream higher education 5 and many of its students progress from CACE diploma programmes to UCC postgraduate programmes. 9 Centre for Adult Continuing Education (CACE) CACE celebrated its sixty-fifth birthday in 2011. The first Diploma in 19 CACE is committed to the provision of lifelong learning by provid- social and economic science was formally opened at a public meeting 25 ing a coherent ladder of educational opportunity for adults wishing in UCC on 14 November 1946. Twenty-four students went on to be to study at different stages in their personal and professional lives, awarded with the diploma in June 1948. Since then, CACE has con- 33 irrespective of their age or previous educational achievements. tinued to expand the delivery of accredited and interest programmes both on campus and in outreach centres across Munster and Lein- COLLEGE REPORTS Until recently, the general profile of the third-level student body ster. The depth of range and widespread availability of learning op- did not reflect the demographics of society at large. Now, as new portunities reflects the many partnerships CACE has established pathways are opened up, tertiary education reflects the increasing with external educational interests and with statutory, voluntary and 38 participation of students from non-traditional backgrounds such as professional bodies. 48

20 UCC President’s Report 2010–2011 | Teaching and Learning

CACE highlights 2010-2011: The National Academy for Integration of • The programme of short courses offered by CACE continue to go Research, Teaching and Learning (NAIRTL) from strength to strength. In January 2011, 420 students enrolled in 25 short courses. In October 2011, 550 students enrolled in more NAIRTL is a collaborative project, funded by the Strategic Innovation than 30 courses. The graph below indicates the ongoing increase in Fund (SIF), between UCC, (lead partner), Cork Institute of Technol- 3 uptake on the programme from October 2008 to October 2011. ogy, National University of Ireland Galway, Trinity College Dublin 4 and Waterford Institute of Technology. NAIRTL is based in UCC on 5 the North Mall Campus and was extremely positively reviewed in the 2010 evaluation of SIF-funded initiatives. Click here for a copy of the 9 report: http://www.hea.ie/files/files/file/FINAL%2025%20Jan.pdf

19 NAIRTL highlights 2010-2011: 25 • 2010-2011 saw the highest number of nominations to date for NAIRTL’s National Awards for Excellence in Teaching, with 36 33 nominations being submitted from 17 higher education institutions. The enthusiasm and support for the initiative highlights the COLLEGE REPORTS importance and value that our higher education institutions place on teaching. One of the primary objectives of the awards programme is to raise the profile of teaching and learning through- 38 out the sector by recognising and celebrating teachers who make an outstanding contribution to the student learning experience, 48 • CACE’s Higher Diploma in facilitating inclusion (disability studies) 56 was launched in May 2011 by Minister of State, Kathleen Lynch, TD. The diploma, the first of its kind in Ireland, is designed to 65 enhance active citizenship and employability for people working in the caring or voluntary sectors, or for adult learners with an interest in disability. 76 • Willie Weir, CACE, received the Institute of Occupational Safety 80 and Health (IOSH) southern district Safety Person of the Year Award 2011. Willie has been involved with IOSH for over ten years, and 84 has been responsible for promoting a wide variety of programmes accredited by IOSH in the area of health, safety and welfare at work.

The programmes are recognised in over 65 countries worldwide. 86 • 2011 saw the retirement of Dr Tom Mullins as acting director of CACE. Dr Mullins oversaw the mainstreaming of CACE programmes in the university system, specifically in relation to the modularisation process, to facilitate credit allowance and the plac- 88 ing of programmes on the National Framework of Qualifications November 2011, NAIRTL awards ceremony at the Clock Tower Dublin, (NFQ). (l-r): Thomas Farrell, (RCSI); Jennifer Schweppe, (UL); Áine Hyland, • Over 500 CACE students graduated during 2010-2011 with a range (awards programme chair); Minister Ruairi Quinn; Marion Palmer, (IADT); of certificates, diplomas, higher diplomas and masters degrees. John Hennessey, (HEA); Frances McCormack, (NUIG); Kathleen Horgan, (UL)

21 UCC President’s Report 2010–2011 | Teaching and Learning

while acknowledging and rewarding those who are most successful • NAIRTL’s 2011 grants initiative invited applications from existing at uniting their dual roles as teacher and researcher. The reward communities/networks of practice, to support research activities mechanism has been highly influential, evidenced in the concept and projects with themes that have been identified as priority areas embedded in the National Strategy for Higher Education to 2030, in the National Strategy for Higher Education to 2030. The objec- which states that “the recognition of excellence in teaching should tive, as identified in the strategy, is to convert best practice into 3 underpin strategy for the ongoing development of higher educa- standard practice. The grants initiative generated 80 applications 4 tion”. A ceremony was held at the Department of Education and from communities/networks of practice from 25 higher education Skills in November 2011, where Minister Ruairi Quinn presented institutions in Ireland, featuring collaborations with other public 5 the awards. See www.nairtl.ie/awards for full details. sector boards, research institutes, hospitals, private sector industry 9 • NAIRTL’s fifth annual conference was held in conjunction with and HEIs internationally including: Australia; Belgium; UK; Israel; the Centre for Excellence in Learning and Teaching (CELT), NUI, Kosovo; Sweden; and USA. The selection committee, chaired by 19 Galway, in June 2011. The conference attracted 300 delegates Dr Bettie Higgs, awarded funding to nine proposals; among these across 47 institutions in Ireland, UK, and USA. were three proposals from UCC led respectively by Dr Rónán Ó 25 • NAIRTL’s symposium on the national roll-out of the Supervisor Dubhghaill, Dr Tim O’Sullivan and Dr Anca Mustata. See www. 33 Support Curriculum, held in April 2011 in Trinity College Dub- nairtl.ie/funding for full details. lin, attracted staff from 31 higher education institutions (HEI’s) in • A recent grants impact study highlighted the substantial contribu- Ireland tion that has been made with a relatively small scale investment COLLEGE REPORTS • A symposium on ‘Threshold Concepts’, held in conjunction with by NAIRTL grants initiative, by enabling individuals and teams of Ionad Bairre, UCC, in October, attracted over 60 delegates academic staff to be more innovative and creative in their teaching. 38 • Preparations for NAIRTL’s sixth annual conference are well un- To date, more than 160 research projects, involving 420 research- derway. The event will take place in Dublin on 27-29 June 2012. ers representing 17 higher education institutions have benefited 48 The call for abstracts for the 2012 event attracted more than 180 from the grant. A range of useful resources has been generated and submissions from: Ireland; Australia; Austria; Canada; Germany; shared through this initiative across the sector. One of the most 56 India; Iraq; Israel; Korea; New Zealand; Norway; Sweden; Turkey; important aspects of the initiative is its emphasis on the need to UK; and USA. link research with teaching. As the National Strategy for Higher 65 Education to 2030 acknowledges, it is this link that distinguishes teaching in higher education from other levels of education. Many NAIRTL grant holders have demonstrated success at linking re- 76 search and teaching using innovative teaching techniques, in many 80 cases contributing to the teaching of their disciplines far beyond the boundaries of their own institutions. A copy of the grants impact 84 study can be ordered from www.nairtl.ie

88 Overview of NAIRTL grants October 2011, Threshold Concepts symposium at UCC (l-r): Brian initiative 2007-2011 Foley, TCD; Bettie Higgs, UCC; Ray Land, University of Strathclyde

22 UCC President’s Report 2010–2011 | Teaching and Learning

• NAIRTL publications continue to be popular with academic staff Ionad Bairre, UCC’s Teaching and Learning Centre both nationally and internationally. A range of other resources were produced by NAIRTL in 2011 including: videos; podcasts; Ionad Bairre, UCC’s teaching and learning centre, supports UCC screen casts; slideshow presentations; worksheets; case studies; staff and postgraduate students in the pursuit of high-quality, re- and papers, all of which are distributed online. 1,500 publications/ 3 search-enhanced teaching and learning. The centre is committed to resources are downloaded from the NAIRTL website each month. the development of a wide range of teaching strategies to help build 4 See www.nairtl.ie/Resources to access all NAIRTL publications. the capacity of teachers to adapt to the needs of students through a number of initiatives including accredited programmes, masters 5 level and ‘open-to-all’ seminars and workshops. 9 Ionad Bairre Highlights: 19 • Mary Clohessey and Patrick Kiely were appointed to the staff of 25 Ionad Bairre in 2010-2011 and the centre established a physical presence at the West Lodge on the main campus. Nuala Griffin 33 who had worked in a part-time capacity with Ionad Bairre since its inception and was central to the formation of the unit, retired COLLEGE REPORTS in December 2010 • Fifty-three UCC staff were awarded a postgraduate certificate (24) diploma (20) masters (9) qualification in teaching and learning in 38 higher education in 2010-2011 • Forty-five postgraduate students, who assist in the teaching mis- 48 sion of the university, successfully completed an accredited course 56 in teaching and learning in higher education in May 2011. All 45 candidates presented their ongoing classroom enquiry work at the In-At-The-Deep-End symposium in UCC in February 65 • Forty UCC staff registered for two presentations of Ionad Bairre’s ‘teaching and learning with technology’ course. The online course is supported by e-tutorials and a small number of ‘face-to-face’ 76 seminars and workshops 80 • Ten scheduled teaching and learning seminars were held in 2010- 2011 with 200 UCC staff attending one or more session. Visiting 84 and local academics spoke at this seminar series on topics such as ‘Using 4D visualisation in Teaching and Learning’ and ‘Assessment 86 and Podcasting’.

Graduating Ionad Bairre MA class, Dr Bettie Higgs, co-director, Ionad Bairre; 88 Dr Michael Murphy, President, UCC; Professor Grace Neville, vice president for teaching and learning, UCC; Dr Marian McCarthy, co-director, Ionad Bairre

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• Lord David Puttnam, film producer and UK Labour government Office of the Vice-President for adviser in educational matters, spoke in UCC in summer 2011. Teaching and Learning: His paper, ‘Educating for a Digital Society’, attracted an audience of over 250 people from the university community and the general In addition to the oversight function of the above, the office of the public. 3 vice president for teaching and learning was involved in 2010-2011 in • Ionad Bairre staff presented papers and workshops at a number of hosting a number of guest speakers including: Senator David Norris 4 international scholarship of teaching and learning (SoTL) confer- who spoke in March 2011 about his memories of being both teacher ences and welcomed many visiting scholars and teachers to the 5 and student; French film director, Agnes Varda, who delivered a centre who wished to learn more about good practice at Ionad master-class at UCC; French writer, commentator and politician, 9 Bairre. Visiting delegates included counterparts from Mekele Uni- Azouz Begag, who spoke about education and social (in)justices. versity in Ethiopia and various Eastern European universities. 19 • Ionad Bairre continued to maintain and develop links with the com- The vice president for teaching and learning, Professor Grace Neville, munity. Outreach work from staff members included participation 25 delivered a number of conference papers at home and abroad includ- in following initiatives: Cork City Learning Forum; Association for ing Harvard University, Rennes University and at UCC, where she 33 Higher Education Access and Disability (AHEAD); Cork City Coun- delivered the keynote speech at the Mary Ryan Symposium in January cil’s Cork-Rennes twinning committee; board of management of a 2011. A lifelong advocate of international outlook, Professor Neville local second-level school; Irish Association of Geography Teachers; COLLEGE REPORTS was involved in supporting Cork’s French Film Festival 2011, intro- directorship of the UNESCO Global Geopark – The Copper Coast; ducing many of the films during the festival as well as inviting some Earth Science Ireland (a magazine that aims to bridge the gap be- of the documentary film-makers to showcase their work in UCC. 38 tween second and third level science teaching); panellists and panel chairs in various discipline categories of the national Undergraduate In December 2010, Professor Neville was invited to speak at the 48 Awards of Ireland and Northern Ireland. Higher Education Authority’s (HEA) conference in Cork Institute of 56 Technology (CIT) on Erasmus staff mobility, having been a recipient of multiple travelling teaching grants in the last number of years that facilitated teacher-exchange visits to the Sorbonne in Paris and 65 other EU HEIs.

Lord David Puttnam, and Professor Grace Neville, vice president for teaching and learning, UCC

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76 80 RESEARCH AND INNOVATION 84

25 UCC President’s Report 2010–2011 | Research and Innovation

Introduction A Challenging Environment

UCC is a world-class research-led institution that plays a key role Significant progress has been achieved, despite a challenging external 3 in the development of Ireland’s knowledge-based economy. Our environment, including sustained pressure on Exchequer research research strategy is focused on creating major centres of excellence for funding, and an increased economic emphasis on national research 4 world-class research, and is aligned with key Government strategies and development policy. Ongoing developments in the national re- 5 including the Strategy for Science Technology and Innovation (SSTI) search funding landscape which directly impact on the research and Building Ireland’s Smart Economy and the Report of the Innovation innovation mission of UCC include: the Forfás National Research 9 Taskforce. These initiatives set a number of performance targets for Prioritisation Exercise; a study by the Advisory Science Council 19 research and economic development that seek to position Ireland analysing the sustainability of research infrastructure including as an international innovation development hub. In 2010-2011, research institutes and centres; and closer alignment between the 25 the key indicators of UCC research performance remain positive. knowledge transfer and commercialisation agenda and Exchequer The year has also been a period of consolidation for research and research funding distribution. To ensure that UCC is strategically 33 innovation in UCC, and has included the delivery of a series of positioned to maximise the opportunities emerging from these de- initiatives designed to embed and strengthen policy and processes in velopments, the university is actively engaged to take advantage of COLLEGE REPORTS this space. Leading these developments is Professor Anita Maguire, the changing national and international research environment and who began her term as vice president for research and innovation strengthen engagement with our key external stakeholders. Exam- in January 2011. ples include the appointment of UCC academics, Professors Anita 38 Maguire and Caroline Fennell respectively, to the chairs of the Irish 48 Research Council for Science, Engineering and Technology (IRC- SET) and the Irish Research Council for the Humanities and Social 56

26 UCC President’s Report 2010–2011 | Research and Innovation

Sciences (IRCHSS). Professor Maguire is also chair of the National transparent overhead allocation methodology and the creation of Consultation on Horizon 2020, the European Union’s (EU) proposed a strategic research fund. This resource will allow the university to chief instrument for funding research and innovation for the period stimulate new research areas that are aligned with local, regional and 2014-2020. Horizon 2020 is at an advanced stage of planning and national priorities. It will also help UCC to ensure the sustainability the Irish national consultation process, led by UCC, has played a and development of existing research strengths and build a critical 3 significant role in influencing the direction and balance of this criti- mass in areas that underpin economic growth. 4 cally important initiative. 5 Laying the Foundation: 9 Laying the Foundation: Improving Research Support Delivery Research Policy Development 19 2010-2011 saw the conclusion of a comprehensive analysis of re- 25 Improving UCC’s ability to adapt to the rapidly changing external search support services provided by the office of the vice president for research environment and anticipate new opportunities is a strategic research and innovation (OVPRI). The key outcome of this exercise 33 imperative. Ensuring that the university has the tools to thrive in was the development of an organisational structure which deliv- this environment, and that the constraints which impact on com- ers enhanced, targeted support to the UCC research community, COLLEGE REPORTS petitiveness are removed, has dictated the need for a major revision and provides effective leadership of the university research support of UCC policies relevant to the research mission. In the context of function into the future. Objectives detailed in the research support the strategically important role of research staff, a project, led by service restructuring plan achieved this year include: key staff ap- 38 the department of human resources and development, was under- pointments; closer collaboration with UCC’s four colleges; and the 48 taken to develop policies which support the development of research launch of a new Research Support Services website. staff in the institution. Initiatives currently being implemented in- 56 clude: comprehensive career development and training for research The roll-out of UCC’s Institutional Research Information System staff; a recruitment policy for researchers; a new career structure (IRIS) was completed in 2011. IRIS is an easy-to-use, web-based for researchers; and an enhanced research contract management application that allows UCC researchers to maintain, update and 65 policy. Other policy initiatives include the introduction of a simple, publicise their research profiles. In addition, by accurately capturing

27 UCC President’s Report 2010–2011 | Research and Innovation

the research output of the university and significantly enhancing the highest number of successful applications, (105), and success rate, efficient and timely dissemination of our research strengths and -ac (25 per cent), to the EU framework programme 7 (FP7) funding tivities, IRIS performs a vital outreach function for the UCC research calls in the State. 2010-2011 also saw continued growth in other community. New developments in this space include the highlighting key research output metrics including: the number of enrolled PhD of IRIS-uploaded publications on the UCC website, and the ability to student numbers, (1,134 students – an increase of 48 per cent since 3 exclusively search IRIS research profiles via the UCC search engine. 2007/2008); the annual output of PhDs, (228 graduates – an increase 4 Significant additions to IRIS functionality currently in development of 68 per cent in five years); and the frequency with which UCC re- include the implementation of a new web-based funding application search is published and cited. Since 2007, UCC researchers have 5 workflow and IRIS integration with the UCC financial databases. An published over 3,800 research articles in ISI Web of Knowledge- 9 extensive listing of research activity among UCC’s academic com- Indexed publications, including regular appearances in the world’s munity is included as an appendix to this report. top research journals. 19 UCC continued its commitment to the innovation agenda through 25 Research and Innovation Performance 2011. Outputs included: 23 new patent filings; 16 licenses of UCC 33 and Tyndall intellectual property were signed with commercial and Despite adverse economic conditions, key performance indicators industry partners; and two new start-ups which were launched from of UCC’s research activity remain buoyant. Overall research ex- the university. The high level of commercial output is indicative of the COLLEGE REPORTS penditure achieved in 2010-2011 was €79.1m, a reduction of 5.5 per building culture of innovation and entrepreneurship in the university. cent on the research income secured in 2009-2010. 27 per cent of Of particular note is the drive to provide UCC spin-out companies 38 this research income, (€21.7m), came from non-Exchequer sources, with the capability to raise investment directly after roll out. Man- an 81 per cent increase on the previous year. As new awards from agement bandwidth and investment mentoring are also important 48 EU sources has increased by over 200 per cent in two years, non- elements of the support provided to new enterprises. Exchequer funding expenditure is expected to increase significantly 56 next year, coinciding with the successful implementation of key el- The new incubation facilities in the Western Gateway building and ements of the UCC EU Strategy (see figure 1). UCC has the joint the existing wet-lab facilities in the food science building are now 65

28 UCC President’s Report 2010–2011 | Research and Innovation

managed directly by the office of technology transfer, and are col- graduate education programme in nanoscience and nanotechnology lectively branded gatewayUCC: at present, six client companies are (INSPIRE) and is a supporting partner in a further six PRTLI-5- engaged. UCC is also working with the local authorities and other funded graduate education programmes. regional stakeholders to develop Ireland’s first science park. Food and health are central themes of UCC’s research and teach- 3 Looking to the future, and to the provision of support for Ireland’s ing programmes. The university has made considerable investment 4 next generation of entrepreneurs, the inaugural class of the IGNITE in this sector over several decades including the development of a programme graduated in 2011. Based in the Western Gateway build- long-term partnership with Teagasc that has resulted in closer in- 5 ing, the twelve-month programme is delivered by UCC in partner- tegration of research personnel and facilities. Recognition of UCC’s 9 ship with the Cork county and city enterprise boards, and provides standing in this area was reflected in a recent report published by the an environment for graduates to turn innovative ideas into new independent international ratings agency, Thomson Reuters Science 19 products and services. Watch which ranked UCC number two in the world for probiotics research. This ranking was primarily due to publications from re- 25 searchers in the Alimentary Pharmabiotic Centre (APC). The report 33 Research Highlights also indicated that six present and former APC researchers ranked in the top 20 of more than 15,000 authors globally. The university continues to leverage its strategic investments in COLLEGE REPORTS key research areas including: life sciences; health; nanotechnology; Other notable research achievements in 2010–2011 included the dis- energy; and the environment, all of which are critical to Ireland’s covery of a previously uncharted field of hydrothermal vents along the 38 successful economic future. Projects funded under the Programme mid-Atlantic ridge by the VENTuRE scientific expedition led Dr Andy for Research in Third-Level Institutions Cycle 5 (PRTLI-5), with a Wheeler of the Environmental Research Institute (ERI) and the school 48 combined value to UCC of €43m, started in January 2011. UCC is of biological, earth and environmental sciences. This investigation, the lead partner in four capital projects including the development using the national research vessel RV Celtic Explorer, was supported 56 of state-of-the-art research facilities in the Western Gateway build- by the Marine Institute and by the National Geographic Society, who ing, the Tyndall National Institute and the Irish National Maritime filmed the work for inclusion in an upcoming National Geographic 65 Energy Cluster (IMERC) at Ringaskiddy. UCC also leads the national Channel series, Alien Deep. In May, researchers at Tyndall National

29 UCC President’s Report 2010–2011 | Research and Innovation

Institute, led by Dr Domenico Zito, announced the development of a • The Irish marine renewable energy sector is set to benefit from a microchip sensor that can detect respiratory rates without contact with new €9m, EU-funded, UCC-led, initiative to provide access to test the person under observation. The chip aids the constant monitor- facilities in specialist marine renewable energy centres across Europe. ing of babies, hospital patients and other people at risk of obstructive The Marine Renewables Infrastructure Network (MaRINET) offers apneas including sudden infant death syndrome (SIDS). periods of marine renewable energy testing at these centres at no cost 3 to participants through funding from the European Commission. 4 UCC researchers continue to win prestigious funding awards. No- This major EU research infrastructure project is being coordinated table highlights in 2010-2011 included the following successes: by the Hydraulics and Maritime Research Centre (HMRC) and in- 5 • In the Science Foundation Ireland (SFI) Research Frontiers pro- volves 42 testing facilities at 28 research centres in 12 countries 9 gramme 2011, nine UCC researchers received funding awards • UCC researchers secured six awards in the IRCHSS 2010 Research representing a 28 per cent success rate for the institution. This Development Initiative (RDI) funding call. UCC was the best-per- 19 compares to a 14 per cent success rate in the 2010 call forming institution in the State securing 20 per cent of the grants • Researchers from the Tyndall National Institute and CIT are that were awarded in this call. 25 leading a Marie Curie initial training network project valued at 33 €4.8m and which includes 15 academic and industrial partners. UCC continued to promote local and national economic develop- The project will train 14 PhDs and five post-doctoral researchers ment by interacting with industry and business through collabora- over the next four years in the area of photonics, and represents tive research initiatives throughout 2010-2011. In May, UCC and COLLEGE REPORTS an excellent example of local and international collaboration ex- the Tyndall National Institute hosted a visit by senior executives ploiting a non-Exchequer funding source in a key area for Irish and researchers from leading pharmaceutical company, Johnson & 38 economic development. To support UCC’s engagement with, and Johnson. The visit represented a strategically important opportunity exploitation of, EU funding opportunities, an extensive series of to showcase UCC research strengths and a series of presentations, 48 FP7 workshops on funding opportunities was organised. This posters and demonstrations was organised to maximise opportuni- event series was developed by the OVPRI in collaboration with ties for collaboration. 56 the HRB, DAFF, EPA, SEAI, IRCHSS and the IUA

30 UCC President’s Report 2010–2011 | Research and Innovation

UCC researchers continue to publish in the world’s top research journals: • Research led by Dr Ron Pinhasi and collaborators from the Uni- versity of Oxford suggests that Neanderthals died out earlier than previously believed and throws into doubt the theory that Nean- 3 derthals and modern humans interacted for thousands of years. A 4 Neanderthal fossil discovered in the northern Caucasus was found to be 10,000 years older than previous research had suggested. These 5 research findings were published in PNAS Online Early Edition in 9 May 2011 • Research published in Proceedings of the National Academy of Sci- 19 ences USA by Dr Javier Bravo, and Professor John Cryan of the APC, along with collaborators from the Brain-Body Institute at 25 McMaster University in Canada, revealed that probiotic bacteria 33 have the potential to alter brain neurochemistry and treat anxiety and depression-related disorders • Publishing in the same journal, APC researchers led by Dr Mary COLLEGE REPORTS O’Connell-Motherway and Professor Douwe van Sinderen announced the discovery of genes responsible for efficient colonisa- 38 tion by a probiotic bacterium of the intestine. The research will have applications in the functional food and infant formula industries, 48 the latter being strategically very important for Ireland FIGURE 1: 56 Since 2008-2009, there has been a 222% increase in the value of new research awards secured by UCC researchers from the European Commission 65 The theme of promoting UCC research to the wider community and 76 forging new collaborations also featured strongly in 2010-2011. The second college of medicine and health annual research day, held in 80 June, focused on the topic of women’s and children’s health. In Sep- 84 tember, CACSSS launched its inaugural research showcase month that brought together a programme of events which included: conferences; workshops; book launches; performances; and summer schools. In 86 January, SFI announced a five-year extension to the Tyndall National Access Programme (NAP), an all-island scheme that provides access to the expertise, services and specialised equipment available at the Tyndall National Institute. To date, NAP has provided such access to over 440 researchers around the country and has advanced 241 88 research projects in the areas of health, energy, environment, communications and computation. Dr Andrew Wheeler and Dr Peter Heffernan, (CEO Marine Institute), at the RV Celtic Explorer in Galway Docks prior to the departure of the VENTuRE

31 UCC President’s Report 2010–2011 | Research and Innovation

• An important article published in The International Journal of Ag- • InfiniLED Limited, a spin-out from Tyndall National Institute, ricultural Sustainability in November 2010 identified the top 100 won the International Technology Leadership Group University questions for the future of global agriculture. Written by a multidis- Challenge. The company has developed a new generation of light ciplinary team of 55 agricultural and food experts from 23 countries, emitting diode (LED) technology that produces more usable light Dr Colin Sage of the department of geography was the sole contribu- with less electric power than conventional LEDs and will extend 3 tor from Ireland and was charged with responsibility for one of the the battery life of portable devices such as cameras, mobile phones 4 key themes of the paper. and laptops by up to six times • Dr Siobhain O’Mahony, a neuroscientist in the APC and the de- 5 The success and world-class reputation of UCC researchers was also partment of anatomy was recently awarded the Ray Clouse award 9 reflected by their receipt of numerous prestigious awards and ap- for the paper most cited in the field of functional gastrointestinal pointments during 2010-2011: and motility disorders. The which that won Siobhain this award 19 • Dr Brian Ó’Gallachoir, (ERI, and department of civil and environ- was published in Biological Psychiatry in 2009. mental engineering), was elected chairperson to the International 25 Energy Agency, (IEA), executive committee of the Energy Tech- 33 nology Systems Analysis programme (ETSAP). ETSAP is the implementing agreement of the IEA which develops energy systems modelling tools to inform energy policy decisions and energy re- COLLEGE REPORTS search programmes for the short, (to 2020), medium, (to 2050) and long term, (to 2100) 38 • Professor Nuala Finnegan of the department of Hispanic studies and director, centre for Mexican studies, was conferred with the 48 prestigious Ohtli Award by HE Carlos García de Alba on behalf of the Mexican government 56

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76 80 EVENTS 84

33 UCC President’s Report 2010–2011 | Events

BELOW: October 2010 (l-r): students Julie O’Leary, James Northbridge and Mariel 3 Twomey at the launch of the UCC disability support service’s book The Road to Success. The book is a collection 4 of graduate experiences over the past 15 years at UCC 5

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56 ABOVE: October 2010 The eleventh class of George J. Mitchell scholars 65 are welcomed to Ireland at a reception in UCC

80 LEFT: October 2010 84 Awards were presented to six members of UCC staff in recognition of their outstanding achievement and 86 contributions towards realising the vision and goals of the university. Pictured (l-r): Dr Ron Pinhasi, (archaeology); Dr Gerard Fitzgibbon, (drama and theatre studies); Dr Michael Murphy, President, UCC; Pat Cotter, (general services); Dr Siobhan Wills, (law); 88 Michelle Nelson, (graduate studies), and Valerie Cummins, (maritime and energy research)

34 UCC President’s Report 2010–2011 | Events

RIGHT: November 2010 IGNITE, a new centre designed to give graduates 3 professional help with business start-ups, was 4 launched in UCC. Pictured (l-r): Dr Michael Murphy, Billy Kelleher, TD, Minister for Trade and 5 Commerce and Dr Rónán Ó Dubhghaill, director 9 of planning and institutional research, UCC

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80 November 2010 84 ABOVE: The first cohort of UCC/CIT architecture degree students graduate. Pictured are (l-r): Richard Fenton, Dungarvan, 86 Co Waterford; and Alana Straub, Riverstick, Co Cork; both BSc, (hons), architecture, with Dr Brendan Murphy, President, CIT and Dr Michael Murphy ABOVE: January 2011 MBS Asian business launched at UCC. The programme will be delivered by 88 UCC in partnership with Nanyang Business School at Nanyang Technological University and the Farmleigh Fellowship Foundation with the support of Irish companies active in Asia. Pictured (l-r): Ciarán Gallagher, MBS Asian business student; Professor Fan Hong, director, school for Chinese studies and Fred Combe, director of the Farmleigh Fellowship Foundation

35 UCC President’s Report 2010–2011 | Events

BELOW: February 2011 Students of UCC’s final year entrepreneurship and business start-up module raised money for Unicef to benefit the people of Haiti and Africa

5 February 2011 9 LEFT: Graduate of the Year, 19 Michelle McCarthy, (BCL), was one of 25 the 47 outstanding 33 students honoured at the UCC 2010 Prizegiving Ceremony COLLEGE REPORTS

76 RIGHT: June 2011 Four leading figures in the 80 world of medicine, arts and 84 public service were honoured by the National University of Ireland at UCC’s annual 86 Honorary Conferring Ceremony. Pictured (l-r): ABOVE: July 2011 Dr Sha Hailin, Commodore UCC exhibits an important medieval Irish manuscript, the Frank Lynch, and Professor Book of Lismore. The exhibition was officially launched by the Adrian Dixon with Dr Michael Duke of Devonshire. Pictured (l-r): Duke of Devonshire; Crónán 88 Murphy. The fourth recipient, Ó Doibhlin, sub-librarian of special collections, archives and Harriet O’Donovan-Sheehy, repository services, UCC; and John Fitzgerald, librarian and was unable to attend the event director of information services, UCC

36 UCC President’s Report 2010–2011 | Events

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48 ABOVE: May 2011 ABOVE: June 2011 56 HM Queen Elizabeth II visits the Tyndall The Taoiseach announces National Institute, UCC. Pictured (l-r): an alliance between UCC HRH the Duke of Edinburgh; Dr Michael and the Irish Management 65 Murphy; Professor Roger Whatmore, Institute. Pictured (l-r): IMI CEO, Tyndall National Institute; and Chairman Dr Phil Nolan, HM Queen Elizabeth An Taoiseach Enda Kenny, 76 and Dr Michael Murphy RIGHT: May 2011 80 UCC launches new Centre for Global 84 Development (CGD). Pictured (l-r): Professor Patrick Fitzpatrick, head of college of science, engineering and food 86 science; Professor Irene Lynch-Fannon, head of the college of business and law; Minister Jan O’Sullivan, and Paul Conway, associate director of centre for global development 88

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76 80 COLLEGE OF ARTS, CELTIC 84 STUDIES AND SOCIAL SCIENCES

38 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

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48 Introduction proud of the success of our staff and students in achieving research 56 funding. CACSSS significantly increased its share of Irish Research The College of Arts, Celtic Studies and Social Sciences (CACSSS) con- Council for Humanities and Social Sciences (IRCHSS) postgraduate tinues to expand and innovate in its curricular programmes, deepen scholarships, giving the college the competitive edge when applying 65 its external cultural engagement, and disseminate research in journals for funding. and monographs of the highest standing internationally. In order to CACSSS continues to expand strategic engagement with external groups 76 further enhance our commitment to teaching and learning, CACSSS has developed several innovative undergraduate programmes, across both nationally and internationally. We believe that such relationships 80 a range of disciplines. The college’s commitment to the development are highly beneficial to the staff and student body in the form of inter- of high-quality postgraduate programmes led to the introduction of national exchanges and opportunities. At an international level, the 84 several new programmes including the MBS in Asian studies, the Confucius Institute continues to strengthen educational cooperation PhD in digital arts and humanities and the Certificate in arts. between Ireland and China. The college also supports several projects 86 at a local and national level, including the Northside Folklore Project. The college continued to meet the challenges of a competitive research environment through a variety of new developments including the establishment of a new state-of-the-art research centre. We have also extended financial and administrative support to research 88 projects and funding application bids. The college is particularly

39 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

The college encompasses a wide variety of academic activity and count allowing anyone to follow and make a ‘live’ contribution to has strengthened its performance across a range of areas, including the showcase event teaching and learning and research, over the last year. Examples of • A virtual research space within the college website was launched these academic and research achievements are highlighted below. in September to highlight funding opportunities, important government research initiatives and policies, conferences and other 3 relevant research information. To find out more, click here:http:// 4 Research Highlights www.ucc.ie/en/cacsss/research • A new research centre was opened in the O’Rahilly Building in 5 • Nineteen IRCHSS scholarships were awarded to PhD students in 2011 9 CACSSS in 2011 • Five research priority areas in the college were identified by a 2010- • IRCHSS postdoctoral scholarships were awarded to James Lyttleton, 2011 Forfás exercise. Funded workshops for these areas formed 19 Mark Pierluigi and James Ryan part of the college Research Showcase Month • Individual and group funding applications, both nationally and • The graduate school launched an online, peer-reviewed, - post 25 internationally, were supported with the help of a new research graduate research journal, Aigne (‘mind’). The journal is run by 33 officer. These included a visit and workshop by Dr Pascal Dissard PhD students and Dr Orla Murphy (school of English). and Professor Nicholas Canny of the European Research Commis- • The department of French led a project for an international sum- sion in 2010 mer school for doctoral students and early researchers spanning a COLLEGE REPORTS • CACSSS-funded workshops for the Seventh Framework Pro- range of humanities disciplines. The initiative was funded by the gramme, (FP7), and other European bids in 2010 were held IRCHSS and CACSSS, and was jointly organised with the Humani- 38 • The inaugural Research Showcase Month was held in September ties Institute of Ireland, UCD 2011, with a variety of events organised to highlight the research • The school of social studies, in collaboration with researchers from 48 activities of staff and postgraduate students in CACSSS. Many École des Mines de Paris, Lancaster University, Durham Univer- of these events were open to the general public: the PhD Slam, sity and Coimbra University (Portugal), form part of the EU-FP7 56 for example, was attended by Leaving Certificate students from ‘science in society’ collaborative project, European Patients’ Or- a number of Cork schools, with a blog, an email and a twitter ac- ganisations in a Knowledge Society (EPOKS) 65

40 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

• A €5,000 grant from CACSSS. and a €12,500 grant from Enterprise • Dr Jason Harris (school of history) raised €100,000 through the Ireland, assisted Professor Arpad Szakolczai in coordinating a con- Centre for Neo-Latin Studies in collaboration with the Irish Manu- sortium for a €2.7million FP7 application, ‘Europeans in Everyday scripts Commission and CACSSS to fund a project to produce a Life: the political anthropology of European integration’, involv- translation of Robert O’Connell’s Historia Capucinorum (1656). Dr ing partners from the universities of: Cambridge; Belfast; Glasgow; Nóirín Ní Bheaglaoi will produce the translation under the direc- 3 Aalborg (Denmark); Konstanz (Germay); Cluj (Romania); Szeged tion of Dr Harris 4 (Hungary); the American University of Rome; and the Norwegian • Dr Sean Hammond received EU funding for the Identifying and Institute of International Affairs Catching Originators in P2P Networks project 5 • Dr Ron Pinhasi received a grant of €1.08m from the European Re- • Dr Martin Szczerbinski was a co-recipient of the EU-Comenius Mul- 9 search Council for independent Research project. ‘From the Earliest tilateral project grant for the project, ‘A Science-Based Tool for Train- Modern Humans to the Onset of Farming (45,000-4,500 BP): the ing Fluency in Literacy for Teachers and Learners’. Coordinated by 19 role of climate, lifestyle, health, migration and selection in shaping the University of Jyvaskyla, (Finland), partnered by the University of European population history’ Graz (Austria) and UCC, the value of the project to UCC amounts 25 to €97,100 33 • Study of Religions (school of Asian studies) was awarded a fully- funded postdoctoral fellowship by the Dhammakaya International Society of the United Kingdom for, ‘Transitions and Continuities COLLEGE REPORTS in Early Modern Thai Buddhism’ • Research award from Standing Conference on Teacher Education 38 North and South (SCOTENS) was awarded to Dr Tracey Con- nolly (school of education) as leading researcher on the project, 48 ’Assessment in Teacher Education North and South’ (ATENS) • Dr Larry Geary received an IRCHSS Research Development Ini- 56 tiative, Strand 5 award of €57,888 for his project, ‘Intellectual Dis- ability and the Irish District Asylums: Ballinasloe, 1891-1911’ 65 • Dr Karel Matula (school of Hispanic studies), won an IRCHSS postgraduate studies award for his PhD research project, ‘The Promo- tion of Painting as a Liberal Art in the Work of Diego Velazquez’ 76 • A Mexican government scholarship for postgraduate study was 80 awarded to PhD student, Emer Clifford (school of Hispanic studies) 84 • Professor Nuala Finnegan received a NAIRTL award for tandem learning project, ‘Cultural Interfaces in the Hispanic World’

• A Marie Curie International Outgoing Fellowship was awarded to 86 Dr Juniper Hill (school of music) • John Godfrey received Arts Council of Ireland projects award of €10,300 to create and present collaborative new work with com- poser Jennifer Walshe, the Quiet Music Ensemble and Irish tradi- 88 tional musicians • Michelle Finnerty received an Arts Council of Ireland grant for the research and development of The Connections Project, a community music and education initiative

41 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

• Researchers from the school of applied psychology collaborated with Teaching and Learning Highlights researchers from École des Mines de Paris, Lancaster University, Durham University and Coimbra University, (Portugal) on the EU- • Professor David Ryan was appointed vice head (teaching, learning FP7 Science in Society project. The project aims to deepen the un- and curriculum development) derstanding of patients’ organisations in Ireland, France, Britain and 3 • A language scholarship scheme, the Mary Ryan Scholarship, of- Portugal in four fields: rare and orphan diseases; maternity services; fers €5,000 to students who achieved high points in the Learning 4 Alzheimer’s disease; and attention deficit and hyperactivity disorder Certificate, and who registered for two languages in each year of (ADHD) their degree 5 • Dr Malgorzata Krasnodebska-D’Aughton (school of history) was • A new course in the Study of Religions – authority and commu- 9 awarded €10,000 jointly with Dr Edel Bhreathnach of the Mícheál nity in contemporary christianity, takes an innovative approach Ó Cléirigh Institute, UCD, by the Heritage Council to present a to teaching by exposing students to real fieldwork early in their 19 medieval Irish pilgrimage text in a theatrical format. academic careers 25 • The PRTLI-funded PhD in digital arts and humanities is a structured doctoral research programme in collaboration with TCD, 33 Publications NUIG, National University of Ireland Maynooth, (NUIM), and the Royal Irish Academy, (RIA) A comprehensive list of staff publications can be found in the IRIS COLLEGE REPORTS • The MBS in Asian business is a one-year, full-time programme appendix of this report. awarded by UCC and delivered in partnership with Nanyang Busi- ness School at Nanyang Technological University. December 2011 38 also saw the completion of the first year of the MBS Asian Business Farmleigh Fellowship 48 • The MA in contemporary religions is the first postgraduate pro- 56 gramme of its kind to be offered in Ireland. • The first intake into the MA in archaeological excavation graduated in September 2011. This MA programme responds to the 65 shortage of archaeologists to meet the excavation requirements of infrastructural projects of different kinds. It is the only taught masters programme of its type in Europe 76 • A masters by research (MRes), introduced to bridge the gap be- 80 tween taught and research postgraduate programmes, is proving to be very popular with students 84 • The MA in folklore was reviewed and relaunched as the MA in Irish folklore 86 • The Certificate in arts is a one-year evening programme where adult learners register for one class a week, in one subject • The first intake into the MA in criminology graduated in Septem- ber 2011 • Other new taught programmes launched in 2011 include the High- 88 er Diploma in disability studies and the Postgraduate Diploma in German studies • The Institute of Japanese Studies was officially launched in Sep- tember 2011.

42 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

Awards • Dr Stiofán Ó Cadhla, head of folklore and ethnology, won first prize in the 2010 literary competition of the Irish language cultural • Celine Larkin, an applied psychology student, won the first Irish festival, Oireachtas na Gaeilge, for his publication The Honeysuck- Association of Suicidology Research Award for Excellence le Branch: indigenous knowledge and arts (Cló IarChonnachta) • Roslyn Steer, an MA music student, won a National Undergradu- 3 • Maeve Butler, an applied psychology student, won the Under- graduate of the Year award at the Undergraduate Awards Ireland ate award for her essay titled ‘The Influence of Music on Modernist 4 and Northern Ireland 2011 Literature’ • Dr Tomás Ó Carragáin (archaeology) won the CACSSS Research • Dr Ciaran McCullagh was given an award by the Irish Penology 5 Achievement award for his book Churches in Medieval Ireland Association for his contribution to criminology and penology in 9 (Yale University Press). Dr Ó Carragáin also won the inaugural Ireland Four Courts Press, Michael Adams Prize in Irish Medieval Studies. • Dr Niamh Hourigan received the CACSSS Special Research Com- 19 The prize was awarded at the International Congress on Medieval mendation Award for Understanding Limerick: social exclusion and change (Cork University Press). 25 Studies at Kalamazoo, Michigan, for the best peer-reviewed essay/article on Irish medieval studies published in a book or journal 33 during the period 2006-2010. The winning article was, ‘The Archi- tectural Setting of the Mass in Early Medieval Ireland’ published External Engagement COLLEGE REPORTS in Medieval Archaeology, Vol. 53 • Professor Nuala Finnegan was presented with the Ohtli Award from • An external advisory board was established to provide independ- the Mexican government for recognition of her work as director ent perspectives and advice to CACSSS 38 of Ireland’s only Centre for Mexican Studies • UCC’s Confucius Institute has been named the Confucius Insti- • UCC students, James Moss, Bart O’Beirne and Martina Viscardi tute of the Year, from 388 such institutes all over the world 48 swept the board in the NUI’s Dr Henry Hutchinson Stewart Lit- • The school of music and drama ran the Connections Project, a community music and education initiative 56 erary Scholarship in Italian, winning first, second and third prize respectively • The school of applied social studies initiated a pilot ‘science shop’,

88 Professor Caroline Fennell, head of CACSSS presents Dr Tomás Ó Carragáin, school of geography and archaeology: the human environment with a CACSSS Research Achievement Award 2011

Doctorial graduands process through the Quad on their conferring day, March 2011

43 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

where three MA students engaged with local organisations to present their research findings and recommendations to the organisations selected. The initiative has been successful and will be run again in the next academic year • The school of education, in collaboration with the HSE and the Glen 3 Resource and Sport Centre, organised an annual Sportathon – a 4 series of talks to first-year secondary school students on the health related benefits of physical activity, physical fitness and exercise 5 • The school of education initiated the Design and Implementation 9 of Fundamental Movement Skill programmes for autistic spectrum disorder classes, with volunteer fourth-year undergraduate students 19 in Scoil Padre Pio, Gurranabraher, in collaboration with the Com- munity Development Project, Gurranabraher 25 • The department of folklore and ethnology’s community-based 33 Northside Folklore Project launched the prestigious Inheritance Project in conjunction with the Cork Vision Centre and Cork Civic Trust. The department also continues to maintain links with women COLLEGE REPORTS in Irish-speaking areas through the investigation and documenta- tion of their folklore under the Irish language fieldwork initiative 38 An Léann Duchais Leictreonach • Music students participated in outreach visits to 20 secondary 48 schools in Cork city, providing live musical performances alongside a lecture on Professor Aloys Fleischmann delivered by Michelle 56 Finnerty. The outreach series was a companion to the publication of ‘Meet the Professor’, a learning resource for schools funded by 65 Cork City Council • The school of music presented two seasons of the acclaimed FUAIM Music at UCC series that featured 60 public concerts, 76 seminars and lectures 80 • Professor Arpad Szakolczai was selected as a member of panel SH5 - Cultures and Cultural Production, on the European Re- 84 search Council evaluation panel • The department of Hispanic studies is the country’s only associate

centre for the Instituto Cervantes and involves a wide-ranging pro- 86 gramme of language-learning activities for children and adults • UCC’s Irish Centre for Galican Studies signed a new agreement between UCC and Xunta de Galica, valid until 2013.

44 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

Events and Conferences • ‘Technologies of Self’ was held in UCC in September, 2011. The interdisciplinary conference addressed new media, the avant- • The CACSSS Research Showcase Month was launched in Septem- garde and new theoretical approaches to autobiography post- ber 2011 Lejeune. Guest speakers included Professor Patricia Clough (City University of New York) 3 • An international conference, ‘Alberto Moravia: nuovi approcci per il terzo millennio’, was held in UCC in October, 2010. The conference • ‘Comparing’, an international summer school for doctoral stu- 4 was organised by Professor Mark Chu (Italian) and PhD student, dents in the humanities was jointly organised by UCC and UCD, Emma Keane. and funded by the IRCHSS and CACSSS 5 • The fourth International Graduate Conference in Italian Studies was • ‘Re-presentations of 9/11’, held on 10 September, 2011, was a 9 held in UCC in February, 2011. The conference was organised by Dr workshop offering a forum for reflecting on 9/11 from a variety of Silvia Ross (Italian) and graduate students. The keynote speaker was perspectives and discussed its representation and legacy ten years 19 Dr Charles Burnett (University of Bristol) on • Dr Eoin O’Sullivan, senior lecturer in social policy at TCD, and con- 25 • Alphaville, a new online journal of film and media studies was launched in 2011. The journal is co-directed by Dott. Laura Ras- sultant to the acclaimed RTÉ documentary, States of Fear, presented 33 caroli and Dr Gwenda Young. a keynote address on the Ryan Report at a public lecture held in • ‘Backward Glances: history, imagination and memory’ was held in September, 2011 • A one-day workshop on the theme of ‘creative educations’, especial- COLLEGE REPORTS August, 2011. The conference was organised by postgraduate students from the schools of English and history. Guest speakers includ- ly inter-and trans-disciplinary graduate education, in the context ed Dr Jerome de Groot (University of Manchester) and Dr Geoffrey of current crisis and resource limitations was held in September, 38 Cubitt (University of York) 2011. Creative education is one of the five research priority areas identified by CACSSS. The workshop was organised by Dr Kieran 48 Keohane and Professor Kathy Hall 56 Below: Liadain O’Donovan (daughter of Frank O’Connor) and Harriet O’Donovan Sheehy (widow of Frank O’Connor) 65 preparing for the conferring of her honorary doctorate

Virginia Teehan, director of cultural projects, college of arts, celtic studies 88 and social sciences; Professor Patricia Coughlan, acting head, school of English; Dr Barry Monahan, school of English, Ms Liadain O’Donovan (Daughter of Frank O’Connor); Dr Hilary Lennon, school of English at the launch of the CACSSS Frank O’Connor research website

45 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

• A newly-designed website on the life and works of Cork-born writer Frank O’Connor (http://www.frankoconnor.ucc.ie) was launched in September, 2011 • ‘Environmental Citizenship, Ecological Politics and Global Justice’, was a one-day workshop designed to initiate a series of conversa- 3 tions and possible collaborations across UCC under the umbrella 4 of ‘environmental citizenship’: one of the five research priority areas in CACSSS. 5 9 Student Recruitment Initiatives 19 • CACSSS has established a student recruitment committee, made 25 up of a representative from each school in the college to develop 33 and oversee student recruitment activities • The college has appointed an IT specialist responsible for the rede- sign of the CACSSS website, featuring: a staff portal; subject videos; COLLEGE REPORTS graduate profiles; news on recent events; and information and videos on conferring speakers. The site also features areas specifically 38 dedicated to incoming first-year students and school-leavers • A brochure summarising the subjects and degrees in arts has been 48 written and distributed to all career guidance teachers in the country 56 • A brochure has been published with information on the support offered to postgraduate students by the graduate school 65 • Posters were sent to every secondary school in Ireland and libraries in the Munster area, advertising the CK101 BA degree, which has the biggest intake of all the degrees offered in CACSSS 76

At the launch of The Boolean, UCC’s first university-wide 88 online postgraduate research journal. Thirty seven doctoral students published articles in the journal in non-specialist language. Photographed (l-r): Bridie McCarthy, Farhan Manzoor, Gavin Dillon, Colm Murphy, Sinéad Bannon, Franchin Foping, Syed Imran and Paul Stack

46 UCC President’s Report 2010–2011 | College of Arts, Celtic Studies and Social Sciences

• Posters were sent to third-level institutions around the country pro- Graduate Studies moting the one year graduate Higher Diploma in arts programme • A newspaper campaign advertised the new evening Certificate in The programme of events for UCC’s doctoral students is now more arts extensive than ever before, providing support for students at every • Education Magazine highlighted the degree programmes and 3 stage of the PhD lifecycle. Workshops have included: getting your re- subjects on offer in CACSSS through the CAO. This magazine is search off to a good start; being creative in your research; writing your 4 distributed to every school in the country thesis; and surviving the viva. June 2011 saw the Doctoral Research • In response to student feedback, CACSSS increased its number Showcase where UCC students competed to demonstrate their skills 5 of guaranteed subjects from two to three out of four, for incoming at explaining their research in non-specialist terms, and the release 9 first-year students in 2011-2012 on-line of The Boolean, vol. 2, UCC’s doctoral research journal. These • A working group was established to review the BA programme. initiatives help to raise awareness of the exciting work being under- 19 The group will use an online forum facility to interact with all staff taken by UCC’s doctoral students and are complemented by activi- in CACSSS to gather views and opinions in relation to the review 25 ties organised by college graduate schools, such as training modules, of the BA workshops, student conferences and careers workshops. 33 • Visits by members of the student recruitment committee to individual schools to speak to fifth-year and Leaving Certificate stu- At the heart of our programme for staff is a series of supervisor dents about the subjects and degrees offered by the CACSSS COLLEGE REPORTS training workshops covering everything staff need to know about • The inaugural ‘Try it Out’ day was held on 13 December 2011. Sixty working with research students. A number of briefing sessions on transition year students from twenty Cork schools participated in key elements of graduate education programmes have also been 38 a number of workshops, tours and demonstrations showcasing held. A resource kit for supervisors is now available which includes some of the subjects offered in CACSSS. copies of all major policy documents and forms. This reflects the sig- 48 nificant ongoing changes in graduate education policy which have 56 been developed in recent years, in particular through the Academic Council graduate studies committee, with the focus on implementation and operation of policies. 65 Taken together, these initiatives represent a very significant development in the ongoing support for every aspect of graduate education 76 in UCC. 80

47 3

COLLEGE REPORTS

76 80 COLLEGE OF 84 BUSINESS AND LAW

48 UCC President’s Report 2010–2011 | College of Business and Law

The College of Business and Law has had another successful year. The Enforcement of EU Environmental Law – Key Developments in Demand for both undergraduate and postgraduate courses has re- Domestic Law conference, held in November 2010, presented a vari- mained robust and the college has responded to the current eco- ety of perspectives on the challenges involved in delivering effective 3 nomic climate with courses aimed at equipping its students with new, enforcement. This conference reflects a growing area of expertise in marketable skills. The college has also increased its level of public the faculty of law spanning from environmental law to EU law. 4 engagement, with staff members taking an active part in the debate 5 on the political and economic direction for Ireland at local, national The fifth annual Criminal Justice and Human Rights Lecture took and international level. place in March 2011. The lecture titled ‘The Fate of the Civilian in 9 War’ was delivered by Professor Sir Adam Roberts, president of the British Academy and emeritus professor of international relations 19 Conferences at Oxford University. The lecture was chaired by Justice Hedigan, 25 judge of the High Court. The college hosted a number of conferences and seminars in 2010- 33 2011: The Law and the Environment conference, now in its ninth year, was held in April 2011 in UCC. The conference caters for a wide range of COLLEGE REPORTS In October 2010, the faculty of law held a seminar titled, European professionals including: the legal professions; policy-makers; regula- Union Law in Practice which attracted 70 participants to UCC. The tors; environmental interest groups; local authorities; environmen- seminar was funded by the Department of Foreign Affairs ‘Com- tal consultants; industry; and environmental service providers. It 38 municating Europe’ initiative. aims to promote the exchange of information on the latest legisla- tive and judicial developments, research results and evolving best 48 Child protection and children’s constitutional rights were the topics practice in the areas of environmental law, planning law and natural 56 of an interdisciplinary seminar organised jointly by the departments resources law. of law, applied social studies and the Institute for Social Science in the 21st Century Children (young people’s research cluster) at UCC 65 in November 2011

49 UCC President’s Report 2010–2011 | College of Business and Law

Recruitment Initiatives

The college hosted a number of student recruitment initiatives during the academic year:

3 Junior Certificate Parchment Ceremony 4 The inaugural Junior Certificate Business Studies Parchment ceremony took place in October 2010. Hosted by Professor Irene Lynch- 5 Fannon, head of the college of business and law, the event honoured 9 180 students from UCC’s top feeder schools from Cork city and county who achieved an ‘A’ grade in their Junior Certificate busi- 19 ness studies examination 2010. The vice president for the student 25 experience, Con O’Brien, welcomed the students with their parents and teachers to UCC. Guest speakers included Tanya Murphy, 33 (former lady mayoress), Sean O’Driscoll, CEO, Glen Dimplex and The Law Essay Competition (l-r): Lucy Jones (Fermoy); Aoife Ní Bhriaín Mary O’Sullivan, president of the Business Studies Teachers Asso- (Dingle); Niall Guinan (Athlone); and Bróna Murphy (Tuam) were four COLLEGE REPORTS ciation of Ireland. The aim of the event is to encourage students to of the Law Essay Competition award winners in January 2011 study business at third level. BComm International Showcase 38 The ‘showcase’ event, which took place in December 2010, targeted students wanting to study a language with business subjects. One 48 hundred and thirty three secondary school students from 20 schools 56 met UCC students and staff from various language programmes to try a new language and attend mini lectures on global business. The feedback from this event was extremely positive and another show- 65 case is scheduled for December 2011 with 33 schools in the Munster region expecting to attend.

76 The Law Academy 80 Sixty Leaving Certificate students, from 25 schools across the Mun- ster region, attended the academy to experience life as a law student 84 for one day. Students, who participated in lectures and a Moot Court, had an opportunity to meet staff and students on various law programmes during the February mid-term break in 2010. 86 The Law Essay Competition The competition is aimed at senior-cycle secondary school students to encourage them to pursue careers in law. Prizes were awarded 88 to the winning entrants at a reception hosted by the law faculty in January 2011.

Christ the King Secondary School (left) and Christian Brothers College (above) at the inaugural Junior Certificate Business Studies Parchment ceremony which took place in October 2010

50 UCC President’s Report 2010–2011 | College of Business and Law

The Transition-Year Enterprise Awards Ceremony Programme Development Transition-year students from across the Munster region were invited to write about their experience of running a company, enter- The college has a defining role in shaping UCC’s profile as an entre- prise or bank in their school, to encourage them to study business preneurial university – a key objective of the university’s Strategic Plan at degree level and to go on to pursue a career in this area. Students 3 – through its innovation, commercialisation and entrepreneurship were also asked to demonstrate how businesses play an active part (ICE) curriculum. 4 in their local economies of the areas in which they live. The first two programmes, a full-time MSc (ICE) and a Postgrad- 5 uate Certificate (ICE), were launched this year. The postgraduate 9 certificate is embedded in the new, structured PhD (engineering science) in the Tyndall National Institute. This development means 19 that incoming research students can also pursue a business devel- 25 opment qualification in tandem with their research degree. The -ex citing cross-university collaboration will help the Tyndall National 33 Institute to differentiate itself, and ultimately attract highly-qualified and motivated students, both nationally and internationally. The ICE COLLEGE REPORTS curriculum was developed by the department of management and marketing with the department of accounting, finance and information systems in collaboration with department of law. 38 The programmes will help students from diverse academic back- 48 grounds to acquire a professional qualification in the theory and 56 practice of innovation, technology, commercialisation and entrepreneurship. It also provides participants with the commercial and entrepreneurial skills to further develop their engineering/scientific 65 careers, to obtain a management position at a later stage and to start their own business. Topics covered include: innovation finance; early stage capital; creativity and opportunity recognition; accelerating a 76 Mount St Michael’s, Rosscarbery who won the Transition Year technology business; intellectual property; managing organisational 80 Enterprise Award with their project ‘Fashion Formula’ in 2011 innovation practices; internationalisation and sales; high-tech marketing; entrepreneurial leadership; and building a new venture team. 84 A record number of projects were received from schools in Limer- ick; Tipperary; Waterford; Clare; Kilkenny; Kerry; and Cork city and

county. ‘Fashion Formula’ from Mount St Michael, Rosscarbery was 86 chosen as this year’s winning project by judges. ‘Memory Fountain’ by CBS The Green, Tralee, and net2go‘ - Technonet Ltd’ by St Bro- gan’s College, Bandon, were awarded with second and third place prizes respectively. 88 The Bank of New York Mellon was the major sponsor of this competition in association with Cork Chamber, the commerce faculty, UCC and Musgrave Retail Partners Ireland Ltd. The award ceremony was held in May 2011.

51 UCC President’s Report 2010–2011 | College of Business and Law

With this core curriculum now embedded in structured PhDs and as stand alone programmes, the college can strategically contribute to UCC’s status as a truly entrepreneurial university.

The college introduced two new taught LLMs in September 2011. The 3 LLM (child and family law) is taught by national and international ex- 4 perts and aims to equip students with knowledge of child and family law in theory and practice. At the core of the LLM is the innovative child 5 law clinic which provides legal research services to lawyers litigating 9 children’s issues. Through the LLM (international human rights law and public policy) students will benefit from a series of guest seminars and 19 workshops with key actors in the human rights movement. The teaching team includes staff with distinguished records in research, teaching and 25 public policy engagement and includes amongst its adjunct professors, 33 Samantha Power, (special assistant to president Barack Obama), and Lord Lester of Herne Hill QC. COLLEGE REPORTS Members of the team that won the Irish leg of the Chartered Financial Analyst In response to the Government’s Springboard initiative, the college Institute’s Global Investment Research Challenge, who represented UCC and launched the Certificate in creative and digital marketing. The scheme Ireland in the EMEA regional final in Madrid in April 2011, (l-r): Don Duggan; Dorota Donigiewicz; Richard O’ Donovan; Richard Murphy; Frank Kenny 38 provides funded part-time education and training for 20 people who have been made redundant but could fill current or future job shortages 48 by learning new skills. A second Springboard project, the Certificate in supply chain management, caters for over 30 participants. UCC support- Internationalisation Strategy 56 ed the IMI in the development of its successful Springboard programme in the area of cloud computing. The college also provided educational The college of business and law continues to be at the forefront of the UCC 65 support to participants of the UCC’s IGNITE programme to facilitate internationalisation strategy, with strategic engagement a notable feature the development of ‘start-up’ business concepts. of the college’s year. In addition to consolidating existing partnerships in China, new links are now being forged in India with, for example, Christ 76 University (Bangalore) and Jawaharlal Nehru University (New Delhi). Close 80 working relations have been developed in Singapore especially with Nanyang Technological University. New programmes with Chinese partners include 84 the diplomas in business economics; financial economics; and accounting studies and their associated undergraduate degree equivalents. The college

continues to engage deeply with European universities through ERASMUS. 86 Its longstanding collaborations with US universities will be built upon in coming years with specific focus on JYA programmes.

Under the college’s established partnership, a further 20 students graduated 88 from the joint MSc in rural development between UCC and Mekelle Uni- versity (Ethiopia): the graduation ceremony was held in Mekelle in July 2011. The programme is supported both by Irish Aid and the World Bank. Law and the Environment Conference 2011 (l-r): Dr Ronan Long; Dr Suzanne Kingston; Finola McCarthy; Margaret Gray; Dr Owen McIntyre

52 UCC President’s Report 2010–2011 | College of Business and Law

Student Development divided into project teams; each team was paired with a high profile Finn- ish company. The group was provided with a ‘leading change’ theoretical Students of UCC’s final-year entrepreneurship and business start-up mod- framework to assist the change management challenges being posed by ule (MG4008) put their academic learning to use for the benefit of the peo- the participating companies. The framework was also used to frame their response to these challenges. This is the third time the executive MBA 3 ple of Haiti and Africa. Twenty four business venture groups were given an investment of €5 per group. In just seven days, the students’ collective group has visited Helsinki. The partnered companies have all reported 4 commercial endeavours transformed the €120 investment into €6,700. considerable value from the exercise. Four charities have benefited from the students’ efforts, with Unicef’s 5 programme in Haiti receiving the main portion of the funds (€4,000). Ronan Murray of Ernst & Young was the first recipient of the Deloitte 9 UCC Executive MBA Prize as the outstanding student of the executive A team made up of fourth-year BSc finance, and BSc accounting students MBA class which graduated in 2011. 19 won the Irish leg of the Chartered Financial Analyst Institute’s Global Active student societies are one of the college’s great strengths. The En- 25 Investment Research Challenge and represented UCC and Ireland in the EMEA region final in Madrid. trepreneurial and Social Society is the biggest student society in UCC 33 with over 6,000 active members. The society provides an important link Not to be outdone, a team comprised of fourth and second-year BSc ac- with local businesses and charities, hosting lectures and workshops with successful entrepreneurs such as Liam Casey, Brain Conlon, Alastair COLLEGE REPORTS counting and third-year BSc finance students won the Irish leg of Chartered Institute of Management Accountants (CIMA) Global Business Challenge Campbell, Cully & Sully and the Jellybean Factory. The Commerce Soci- and represented UCC and Ireland in the global final in Chengdu, China. ety and Law Society also had a fruitful year hosting conferences, compe- 38 titions and social events. The executive MBA class travelled to Helsinki in April 2011. The theme of 48 the consultancy-style study visit module was ‘leading change’. The class was 56

88 The first recipient of the Deloitte UCC Executive MBA Prize Inaugural lecture of Dr Vincent Power, adjunct Members of the executive MBA class, who worked with 2011, Ronan Murray, assistant director - restructuring/ professor of law (l-r): Professor Steve Hedley; Dr the Fazer Group, Finland, during their study visit to transaction advisory services, Ernst & Young, (l-r): Dr Joan Vincent Power; Declan Walsh; The Hon Justice Helsinki in April 2011 (l-r): Miika Kostilainen, Fazer Buckley, director executive MB; Dr Michael Murphy, President, Frank Clarke; Professor Irene Lynch-Fannon Group; Anil Dhiman, DHL Ireland; Nick Lowe, Avnet UCC; Ronan Murray, Ernst & Young; Honor Moore, Deloitte Client Solutions; Victor Nelson, Pfizer Ireland; James Hodgins, Cognex Ltd; Ger Moloney, BAM Construction

53 UCC President’s Report 2010–2011 | College of Business and Law

Staff Development

Dr Philip O’Reilly, (business information systems), has been awarded the Stafford Beer Medal by the British Operational Research Society, for 3 the best paper published in the European Journal of Information Systems in 2010. Derry Cotter, (accounting, finance and information systems), 4 published a new book, Advanced Financial Reporting: A Complete Guide to IFRS (Pearson Education). Dr John Eakin, (economics), submitted a 5 prize-winning paper to the Irish Transport Research Network. 9 Dr Theresa Reidy, (government), was a regular contributor to national and 19 international political commentary. She was part of RTÉ’s political analysis 25 team for the general election in February, and the Irish Presidential election in October. She has appeared on BBC and Reuters, and her research 33 has featured in the Wall Street Journal.

COLLEGE REPORTS Fiona Buckley, (government), is a founding member of the 50/50 group, a single-issue, national advocacy group dedicated to achieving equal representation in Irish politics. The group was formed in October 2010 fol- 38 lowing a conference in UCC, organised by Fiona Buckley and Dr Sandra McAvoy, (women’s studies), to examine the role of women in Irish poli- 48 Students graduating from the joint UCC-Mekelle University MSc in Rural tics. The group has successfully lobbied the Government to introduce Development, at the graduation ceremony in Mekelle, Ethiopia, in July 2011. 56 the gender quota legislation contained in the Electoral (Amendment) Also pictured are Mike Fitzgibbon and Dr Nick Chisholm, department of food Political Funding Bill, 2011. business and development, UCC who implement the programme in Ethiopia

54 UCC President’s Report 2010–2011 | College of Business and Law

Dr Jane Suiter, (government), is one of the academic directors of ‘We the Citizens’ – an Atlantic Philanthropies-funded project, to encourage citizen engagement with the democratic process, backed by the Irish Universities 3 Association (IUA). The group held a series of meetings in different parts 4 of the Irish Republic that culminated in a citizen assembly in June. The research has been presented to the Government, who have indicated that 5 it will serve as a model for a Government-sponsored initiative in 2012. 9 HE Maeve Collins, Irish ambassador to Vietnam, visited the college in 19 May 2011 and delivered a lecture titled ‘Ireland in Vietnam’. The lecture was jointly organised by UCC’s School of Asian studies and the faculty of 25 law. During the lecture, Ambassador Collins discussed Irish foreign policy, 33 diplomacy, the legacy of conflict, development aid and human rights in Vietnam. She also discussed careers in foreign affairs and diplomacy at the Q&A session. Ambassador Collins is a graduate of UCC faculty of COLLEGE REPORTS law (BCL), the University of Ottawa (LLM) and the Institute of Public Administration. 38 Dr Vincent Power, adjunct professor in law, delivered his inaugural lec- 48 ture titled ‘Competition Law: Reflections and New Directions’ at UCC 56 in February, 2011. The event was chaired by the Honourable Mr Justice Frank Clarke, judge of the High Court.

Above: Members of the 76 team that won the Irish leg of the Chartered 80 Institute of Management Accountants (CIMA) 84 which represented Ireland in the Global final in Chendu, China, in June 86 2011 (back, l-r): David White Robert Sweeney, (front) Hazel Grimes; Gary O’Mahony

The fifth annual Criminal Justice and Human Rights Lecture Speakers at the European Union Law in Practice Lecture (l-r): (l-r): Sir Adam Roberts; Justice Hedigan, judge of the High Anthony Collins SC; Emily Gibson BL, chair, Irish Society for Court; Dr Siobhan Wills; Dr Catherine O’Sullivan European Law; and chairing the event, John Lucey SC

55 3

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76 80 COLLEGE OF 84 MEDICINE AND HEALTH

56 UCC President’s Report 2010–2011 | College of Medicine and Health

Introduction There were a number of retirements this year and, as always, the college acknowledges the work of all those whose experience and expertise have At a time when the benchmark for so many endeavours is just to survive, brought us to our current point. 3 the College of Medicine and Health is seeking to thrive. We are working to maintain our international reputation in education and research, 4 building on the foundations which have been developed over our 167-year Catherine McAuley School of 5 history. The college is a community of scholars: some are students taking Nursing and Midwifery their first steps into university life; others are staff members seeking to 9 make a difference through teaching and research. Collectively, we pool our Research Funding 19 knowledge and creativity to ensure that we contribute to better clinical care for the people we serve. The high calibre of our students, with their Professor Eileen Savage, (PI), (nursing and midwifery), and co-researchers 25 freshness and energy, makes this both possible and extremely rewarding. Professor Ivan Perry, Dr Tony Fitzgerald, (both epidemiology and public Our students ensure that our focus is on the future, and together we work 33 health), Dr Muireann Ni Chronin, (paediatrics and child health), Dr F. for the benefit of tomorrow’s practitioners, innovators and leaders. Mathias, (Our Lady’s Hospital Sick Children), and collaborators from Leeds University, (UK) and John Hopkins University, (US), were award- COLLEGE REPORTS A number of developments this year have been particularly memorable. ed a Medical Research Charities Group-Health Research Board grant of We welcomed 50 new medical students from Malaysia who will receive €80,690, for a national study on the prevalence of depression and anxiety in their pre-clinical teaching in UCC, and will move to Perek State to com- 38 the cystic fibrosis population in Ireland and its impact on health outcomes plete their clinical teaching in the hospitals in Taiping. The degree pro- and quality of life. The study will be part of an international collaboration 48 gramme, which is run in partnership with NUIG and Allianze University involving over 20 countries. College for Medical Sciences in Penang, demonstrates Ireland’s interna- 56 tional reputation for the quality of its medical education.

Over the summer of 2010, new laboratories for the department of anatomy 65 were opened. They incorporate state-of-the-art technologies, allowing anatomy to be taught using the latest techniques. Part of the facilities, 76 funded under the Programme for Research in Third Level Institutions, (PRTLI), will see researchers’ location consolidated in the Western Gate- 80 way building, along with the establishment of a National Centre for Health 84 Services. Staff and external reviewers will examine how they can best develop in 86 education, research and healthcare in the coming years for both the school of pharmacy and the dental school and hospital. The reviews will highlight the priorities for the two schools and inform development planning.

2010-2011 saw a number of staff departures and arrivals: Professor John 88 Higgins assumed the post of head of college in May 2010, taking over from Professor Geraldine McCarthy; Professor Ken O’Halloran took the chair of physiology; whilst Professor John Cryan took the chair in anatomy; they will soon be joined by a new chair in pharmacology and therapeutics.

57 UCC President’s Report 2010–2011 | College of Medicine and Health

Academic Awards

Staff Mary Hughes was awarded the Óran Ó Muiré Bursary for nurse-led asthma research by the Asthma Society of Ireland, for her proposal ‘Adolescent 3 Asthma Symptom Control: a grounded theory’ in December 2010 4 Dr Harry Gijbels and Lydia Sapouna were awarded Exceptional Citizen 5 Awards at the second annual University Staff Recognition Awards cer- 9 emony, UCC, for the development of the Critical Voices Network. In the view of the judging panel, their work “offers an exceptional service to the 19 citizens of the wider community and contributes to enhancing the quality 25 of life of many people who have traditionally been ‘silenced” 33 Dr Joan McCarthy; Dr Dolores Dooley; Dr Mary Donnelly; Dr Louise Campbell; and Dr David Smith co-authored End-of-Life Care: Ethics and Law. The book, a unique collaboration between Cork University Press, COLLEGE REPORTS the Irish Hospice Foundation and the Royal College of Surgeons in Ire- assistant, won third prize (nursing), 2010; and Aideen Kelly won first place land, was published November 2011. (midwifery), 2011. 38 Students College of Medicine and Health Scholarships and Prizes, November 2010: 48 Roisin O’Connor, BSc midwifery 1; Aideen Kelly, BSc midwifery 3; Rachel PhD Studies Webb, BSc nursing children’s and general; Olivia Deasy, BSc nursing gen- 56 Alice Coffey was conferred with a PhD in UCC in December 2010. Rhona eral 2: Thomas Fitzsimons, BSc nursing general 3; and Veronika Braig, O’Connell completed her PhD studies with the University of Central Lan- BSc midwifery 2. Veronika was also awarded an HRB Summer Student 65 cashire. Scholarship for 2011.

Vicki Cleary; Nicola Cornally; Dawn Farrell; and Dan Taylor were awarded Visiting Academics 76 with the School of Nursing and Midwifery Postgraduate Studentship. Dr Moreen Donahue, senior vice president, patient care services and 80 chief nurse executive, and Dr John Murphy, president and CEO, Danbury Dawn Farrell was awarded an educational grant by the 2011 Advances in Health Systems, Connecticut, USA, visited and delivered presentations 84 Inflammatory Bowel Disease, Crohn’s and Colitis Foundation’s Clinical on the topic of spirituality in medicine today and ‘Down syndrome: a mother’s perspective’ in autumn 2010. and Research Conference. 86 Undergraduate Dr Erja Moore, principle lecturer, North Karelia University of Applied NUI Dr H.H. Stewart Medical Scholarship 2010 (Nursing and Midwifery): Sciences (Finland), presented on ‘Studying for a University Degree at Elizabeth Mitchell won second prize (nursing), 2009; Frances Friedlander Adult Age’, in October 2010. won second prize (midwifery); and Margaret Fitzpatrick won third prize 88 (midwifery). Professor Jean W. Lange, founding dean; Professor Jeanne LeVasseur; Professor Lisa O’Connor; and Professor Celeste Yanni of Quinnipiac NUI Dr H.H. Stewart Medical Scholarship 2010 and 2011 (Nursing and University School of Nursing (USA), visited the school to work on devel- Midwifery): Barry John Ryan won second prize (nursing), 2011; Adele oping collaborations. They also attended and presented at the eleventh O’Mahony, won third prize (nursing), 2011; Elizabeth Weather, research annual research conference.

58 UCC President’s Report 2010–2011 | College of Medicine and Health

ERASMUS Exchanges 2011 Martin Kidney (BSc nursing general) and Deirdre Nuijten (BSc midwifery) participated in the ERASMUS exchange agreement with Finland.

3 Ricky Costello and Aisling Cotter (both BSc nursing intellectual disabilities), 4 Jane Ivess and Mary Sheehan (both BSc nursing general) participated in the ERASMUS exchange agreement with Nottingham University. 5 USA Student Placements 9 Louise Chawke; Lisa Egan; Karen Harte; Deborah Minihane; and Aisling 19 Vaughan; (all BSc nursing general), participated in clinical placements at North Shore LIJ Health Systems (USA). 25

33 Dental School and Hospital COLLEGE REPORTS Highlights for 2010-2011 include: • The proportion of international student recruitment reached 33 per cent 38 in 2010-2011 • A new diploma programme in dental nursing commenced School of Clinical Therapies 48 • The first clinical fellow at PhD level graduated Research Highlights 56 • Two members of staff, Professors Finbarr Allen and Helen Whelton were both awarded by the International Association for Dental Research Fulbright scholar with the department of occupational sciences and occu- • Postgraduate programmes in orthodontics and in oral surgery were reac- pational therapies, (OSOT), Dr Marie Anzalone presented her research on 65 credited by the Irish Committee for Specialist Training in Dentistry. children with sensory processing disorders, and Dr Anzalone and Helen Lynch presented on play, sensory regulation and natural learning environments to the Irish Paediatric Occupational Therapy group in September 76 2011 and the Irish Intellectual Disability group in October 2011. Helen 80 Lynch also presented on the use of video analysis software for the ISS21 children and young peoples’ group. She also held a two-day workshop 84 ‘Sensory Based Self Regulation in the Young Child’ for local occupational therapists, speech and language therapists, psychologists, physiotherapists 86 and educators.

Far left: Dental Nursing Graduation 2011. 88 Left: Professor Finbarr Allen was awarded the Geriatric Oral Research Award and Professor Helen Whelton the Behavioral, Epidemiologic and Health Services Research Award by the International Association for Dental Research

59 UCC President’s Report 2010–2011 | College of Medicine and Health

Eithne Hunt, (occupational science and occupational therapy), presented 3 her research on measuring and mapping adolescent time use at the Inter- 4 national Association of Time Use conference in held in June 2011 Oxford, England. She also received a bursary from the Children’s Research Network 5 for Ireland and Northern Ireland, to attend a summer school on quantitative 9 research methodologies for policy and practice in child health in October 2011, which was held in Dublin. 19 Teaching Highlights: 25 Dr Robert Fourie devised a curriculum for a postgraduate programme 33 in advanced audiology in conjunction with local leaders in the field, Jean Hegarty, president of the Irish Academy of Audiology and Otology and Peter O’Sullivan, ENT surgeon, South Infirmary/Victoria University COLLEGE REPORTS Hospital. Professor Fiona Gibbon directed the process as head of school. There are now a number of postgraduate students in advanced audiology 38 registered in the department of speech and hearing sciences. A team of researchers, including Professor Fiona Gibbon, (head, clini- 48 cal therapies), published an article on articulation difficulties in children 2010 was an exciting and industrious year for students of the department with autism, which was one of the top ten most viewed and cited articles of speech and hearing sciences. For the first time since the department 56 in the International Journal of Speech-Language Pathology. was opened, all students who graduated in 2010 achieved competence in dysphagia at a basic level. This is in line with recommendations from the 65 Dr Ciara O’Toole, (speech and hearing sciences), received funding from Irish Association of Speech and Language Therapists. Foras na Gaeilge to continue with her investigation into early language acquisition in preschool children, in collaboration with Dr Tina Hickey Dr Georgia DeGangi presented a two-day CPD workshop on behalf of 76 from UCD. The funding will allow for data to be collected across Gaeltacht OSOT for 70 therapists, psychologists and educators of children with 80 areas of Cork, Kerry and Galway, and will continue until March 2013. special needs, with a focus on self-regulation in young children in Octo- ber 2010. 84 Dr Alice Lee and Professor Fiona Gibbon were invited to publish chapters on speech difficulties in textbooks about cleft palate and voice disorders. Dr The school of clinical therapies welcomed the first two international stu-

O’Toole was invited to publish a chapter on learning styles and problem- dents, Said Al-Sidari from Oman and Samar Ghazi, from Saudi Arabia, 86 based learning curriculum. on the MSc evidence based therapy practice.

Dr Robert Fourie, (speech and hearing sciences), edited the first book on Fourth-year occupational therapy student, Sarah Barry-Reidy, was awarded therapeutic processes for communication disorders. Therapeutic Proc- a H.H. Stewart medal. 88 esses for Communication Disorders: a Guide for Clinicians and Students, (Psychology Press), was published in February 2011. Eithne Hunt and Linda Horgan were among five UCC staff to be awarded the UCC President’s Award for Excellence in Teaching and Learning for Professor Fiona Gibbon was the keynote speaker at the second Paediatric their work on year one of the occupational therapy undergraduate pro- Neuropsychology Symposium in March 2011, held in London gramme in November 2011.

60 UCC President’s Report 2010–2011 | College of Medicine and Health

Conferences, Reports and Achievements create new ideas and share knowledge with fellow European occupational Janice Crausaz, at the invitation of the Hellenic Occupational Therapy As- therapy students at the conference. sociation, conducted two half-day workshops on evidence-based practice for Greek therapists in Athens, in June 2010. OSOT held its annual first-year student creative exhibition at the Jennings Gallery, Brookfield, on the theme ‘Ordinary Extraordinary’. Students used 3 Janice Crausaz began a service development project with a twelve-mem- a range of printmaking techniques in their art under the guidance of the 4 ber occupational therapy primary care team in HSE West (Sligo/Leitrim/ print workshop of Cork Printmakers. Students Mairead Larkin and Niamh West Cavan). Cronin, spoke about their creative experience at a series of speeches at 5 the exhibition. ‘Learn to See, See to Learn’. 9 Eithne Hunt, Clare O’Sullivan and Helen Lynch participated in the first joint American and Canadian occupational science symposium held in An exhibition on the life and work of Fr O’Flynn was held in the Jennings 19 London and Ontario, in October 2010. Helen presented on material and Gallery. The exhibition was officially opened by RTÉ’s Donncha Ó Dúlaing. environmental culture of childhood objects and spaces in the home; Clare 25 presented on older adults’ participation in leisure activities post stroke. Dr Alice Lee is serving as the editor of the Journal of Clinical Speech and 33 Language Studies, which is the official journal of the Irish Association of Janice Crausaz and Shelley Mack attended the sixteenth annual meeting Speech and Language Therapists. of the European Network of Occupational Therapy in Higher Education, COLLEGE REPORTS (ENOTHE), which was held in October in Stockholm, at the Karolinska Occupational therapy advice was sought from the department on chang- Institute. As 2010 was the European Year of Combating Poverty and Social es to the new facilities in the Mardyke Arena, in relation to universal and 38 Exclusion, this was also the theme of the meeting. Third-year students Su- specialised access to facilities for people with physical and sensory dis- zanne Leclair and Ciara Fitzgerald investigated the occupational therapy abilities. Linda Horgan consulted with the building and estates office and 48 services currently available to the travelling community in Ireland. They with management of the Arena. These issues are central to UCC policy explored how negative attitudes and poor understanding of traveller life- of equality and the university aims to have all areas accessible by 2015, 56 style/traditions are barriers for access to these services. As similar com- which is consistent with Government policy. munities exist throughout Europe, they sought to stimulate a discussion, 65

61 UCC President’s Report 2010–2011 | College of Medicine and Health

Jennifer O’Callaghan and Helen Lynch, (OSOT), mentored by Dr Gustavo Reinoso presented at the second European conference on sensory integration in Portugal in May 2011.

Una O’Leary and Clare O’Sullivan, (OSOT), presented “An exploration 3 of older adults’ reflections on spirituality” at the European Union Geri- 4 atric Medicine Society conference in Dublin in October 2010 and the Rehabilitation Therapy Research Society conference in the University of 5 Limerick in May 2011. 9 Dr Robert Fourie has been asked by the HSE audiology services to host a 19 series of continuing professional development courses for Irish audiolo- gists. 25 33 School of Medicine

COLLEGE REPORTS ‘Patients and Peace’, an exhibition of paintings by the late Joe O’Donnell, MChFRCSI, was held in conjunction with the inaugural Joe O’Donnell Memorial lecture and the Medical Alumni Scientific Conference, in the 38 Jennings Gallery in September. Joe O’Donnell is fondly remembered by friends and colleagues, not only for his artistic talent, but also for his 48 twenty-three-year service as a vascular surgeon. 56 An international team of scientists and physicians, led by Professor Louise Kenny, identified 14 new metabolites which can detect the risk of preec- 65 lampsia in first-time pregnant women. The research findings were -pub lished in September 2010 in Hypertension, the Journal of the American Heart Association. The metabolomic discovery programme is funded by 76 the Wellcome Trust and SFI. 80 The National Perinatal Epidemiology Centre, (NPEC), hosted an infor- 84 mation day in November 2010 on perinatal mortality surveillance in Ireland. The event was attended by 50 multidisciplinary delegates from 86 across the country. Transition year students get a taste of life as a medical student at the Prep-for-Med-School event in May 2011 NPEC (http://www.ucc.ie/en/npec/) hosted a study day in January 2011, to stimulate discussion regarding caesarean section in Ireland. The event was attended by 150 multidisciplinary delegates from across the country. 88 Medical student, Fred English, was awarded the 2010 Health Research Board Watts Medal. The Watts Medal is a national award presented by HRB for medical research carried out with HRB funding. Fred has made

62 UCC President’s Report 2010–2011 | College of Medicine and Health

a ground breaking discovery in the search for a cure for preeclampsia Department of Epidemiology and Public Health which is the leading cause of maternal and neonatal death globally. His research showed in vivo that inhibiting a particular enzyme called PARP The Livinghealth Clinic, Mitchelstown, and the department of epidemi- could prevent the development and onset of this disease. The research ology and public health, UCC, offered a free health check to a random holds genuine promise as a new therapy for preeclampsia. 3 sample of patients from the clinic. People within the ages of 50-69 were invited to participate in the Cork and Kerry Heart Disease and Diabetes 4 UCC medical students visited local primary schools in Glasheen, Cork, to study under the supervision of Dr Tom O’Callaghan and the study prin- present key nutritional messages to school-children. This novel nutrition cipal investigator, Professor Ivan Perry. 5 outreach programme was developed in association with the Alimentary 9 Pharmabiotic Centre, (APC), which has a hugely popular schools educa- Dr Patricia Kearney, (epidemiology and public health), is one of a group tion programme. of researchers from European universities participating in a new research 19 project investigating current treatment practices for people who suffer More than 2,000 babies and children will benefit over the next six years 25 from a mildly underactive thyroid gland. The inaugural meeting took place from a new, dedicated paediatric research facility, which opened early at the University of Glasgow for the new study titled: ‘Thyroid Hormone 33 in 2011. The HRB will invest more than €58,000 in the HRB Discovery Replacement for Subclinical Hypo-Thyroidism Trial’, (TRUST). It is fund- Centre to study why some children develop common diseases while oth- ed by a €6m grant from the EU’s FP7 programme. ers remain healthy. COLLEGE REPORTS The first ‘National Burden of Disease’ study in Ireland is now underway, The school of medicine at UCC hosted its first Prep-for-Med-School focusing on obesity and nutrition-related risk factors. The study is part of 38 event in May 2011. The school offered a full day ‘taster’ which was -at the new Centre for Health and Diet Research, a joint UCC/UCD initia- tended by 80 transition-year students from schools across Cork city and tive funded by the HRB. UCC is responsible for the cluster on population 48 county, giving students and their guidance counsellors an insight into health modelling. An ‘obesity observatory’ will be set up to develop statis- studying medicine at UCC. 56 tical models for diabetes and other nutrition-related chronic conditions in

Left: Professor Ivan Perry, head of the Department of Epidemiology and Public Health and the Cork and Kerry Group research staff. Above: (l-r): Patricia Kearney, (UCC), Nicholas Rodondi , Jacobijn Gussekloo, David Stott and Rudi Westendorp

63 UCC President’s Report 2010–2011 | College of Medicine and Health

collaboration with the Institute for Public Health in Ireland. The centre will carry out the first national burden of disease study in Ireland, focusing on obesity and nutrition related risk factors. The researchers have access to virtually all major diet, nutrition and health databases currently available in Ireland. 3

COLLEGE REPORTS Department of Medicine

38 Grants Dr Denis O’Mahony was awarded an HRB grant of € 250,000 for ‘Prevention 48 of adverse drug events, (ADEs), in hospitalized older patients using STOPP/ 56 START criteria and expert pharmacist medication review’. The funding was made available for the further development of the STOPP/START criteria for inappropriate prescribing in older people and to investigate the 65 potential of STOPP/START as an interventional tool to prevent ADEs in hospitalised older patients. Dr Stephen Byrne, senior lecturer in the UCC school of pharmacy, is the co-applicant of the grant, which was awarded in 76 October 2010. 80 Awards 84 Enterprise Ireland Lifescience and Food Commercialisation Award was giving, in October 2011, in recognition of the development of the spin-out 86 start-up company, Clinical Support Information Systems (CSIS), based on the licensed patent generated from the STOPP/START software prototype intellectual property. The UCC STOPP/START team includes: Dr Denis O’Mahony, (medicine); Dr Stephen Byrne, (pharmacy); Professor Cormac Sreenan, (computer science); Dr Ken Brown, (computer science); 88 Seán Óg Murphy, (computer science); Cristin Ryan, (pharmacy); and Dr Anthony Morrissey, (technology transfer).

64 3

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76 80 COLLEGE OF SCIENCE, 84 ENGINEERING AND FOOD SCIENCE

65 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

Research Highlights

Population structure of bottlenose dolphins in Irish waters: 3 Research in the school of biological, earth and environmental science (BEES) has identified that there are genetically distinct breeding popula- 4 tions of bottlenose dolphins in Irish waters. The research will have a posi- 5 tive impact on wildlife conservation in Irish coastal waters. The SFI-funded project is led by Dr Emer Rogan, and includes Professor Tom Cross, Dr 9 Simon Ingram and Dr Luca Mirimin. 19 The importance of knowing your enemy: 25 A better understanding of how bacterial toxins cause common human diseases may lead to their improved treatment and prevention, accord- 33 ing to a paper published in Nature Reviews Microbiology, August 2011. Evelyn Molloy, a PhD student in the department of microbiology and the COLLEGE REPORTS Alimentary Pharmabiotic Centre (APC), under the supervision of Paul Cotter, Colin Hill and Paul Ross, is the lead author of the review. Evelyn’s work led to collaboration with Douglas Mitchell at the University of Illinois several years work by the researchers, led by Dr Mary O’Connell-Moth- 38 at Urbana-Champaign, USA. The work is funded by IRCSET, the Society erway and Professor Douwe van Sinderen, (microbiology and APC). The 48 for General Microbiology and SFI. scientists have become leaders in the field of functional genomics of probiotic Bifidobacteria. 56 Advances in probiotic research: UCC scientists have discovered the genes responsible for efficient colo- Microbiology publication on the cover of infection and immunity:

nisation by a probiotic bacterium of the intestine. The research will have Research carried out in the laboratory of Dr Cormac Gahan by Georgina 65 applications in the functional food and infant formula industries. The lat- Dowd, as part of her PhD studies, and funded through a Research Fron- ter has strategic importance for Ireland, which produces one-fifth of the tiers programme grant from SFI, was published in Infection and Immunity 76 world’s infant formula. The study was published in the Proceedings of the in January 2011. The work identified new metabolic processes which -al National Academy of Sciences USA, in June 2011. The research, funded low bacteria to grow in the gall bladder and cause painful inflammation, 80 by SFI and performed in collaboration with the APC, is a culmination of (cholecystitis). 84

Far left: (l-r) Evelyn Molloy, (microbiology and APC), and Dr Paul Cotter, (Teagasc Moorepark Food Research Centre). 88 Left: Dr Mary O’Connell-Motherway and Professor Douwe van Sinderen discovered the genes responsible for efficient colonisation by a probiotic bacterium of the intestine

66 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

Department of Microbiology hosts European Molecular Biology Uncharted hydrothermal vents: Organisation (EMBO) postdoctoral fellow: An Irish-led expedition, including BEES PI Dr Andy Wheeler, discovered Dr Mustafa Fazli, EMBO postdoctoral fellow was welcomed by the de- a previously uncharted field of hydrothermal vents along the mid-Atlantic partment of microbiology in August 2011. Dr Fazli’s work is aimed at ridge: the first to be explored north of the Azores. The team, aboard the understanding how unusual intracellular signalling controls biofilm forma- RV Celtic Explorer, found the vent field about 3,000m below the sea’s sur- 3 tion in opportunistic bacterial pathogens known for their ability to cause face by using a remotely-operated vehicle to probe the depths. Using the 4 severe infections in immuno-compromised individuals, including cystic ROV’s high-definition video camera, the team captured images of unusual fibrosis patients. Uncovering the molecular basis of these events in such orange-bodied shrimp, writhing scale worms, eel-like fish, swirling mats 5 bacterial pathogens may identify new target areas for the development of of bacteria and clusters of tiny green limpets. A programme featuring the 9 therapeutic drugs. This type of work is becoming increasingly important expedition is to be shown on the Discovery Channel in 2012. in light of the growing challenge of multi-drug resistant microbes and the 19 paucity of novel antibiotics.

25 Scientists pioneer a new method for fabrication of ultra-small 33 electronic devices: Professor Michael Morris, Dr Justin Homes, and co-workers in the department of chemistry have filed a patent detailing a new form of lithography COLLEGE REPORTS using the self-assembly of block copolymers coupled to the incorporation of inorganic materials to generate sub-10nm semiconductor structures. Dr Andy Wheeler (BEES) explains the expedition to 38 This work has led to the award of a two-year $320,000 grant from the prestigious Semiconductor Research Council to explore the development the mid-Atlantic ridge to 48 of this technology. an audience aboard the RV Celtic Explorer 56 Research informing Ireland’s climate policy: Members of staff from the school of engineering and the Environmental 65 Research Institute, (ERI), led by Dr Brian Ó Gallachóir, have been working on an important project to provide evidence and data to assist in the development of Ireland’s climate-change policy. The project, Energy 76 Modelling – Irish TIMES, has produced the first set of results on what 80 Ireland’s energy system might look like in 2050. The research now provides Ireland with the capability, previously unavailable, to answer questions on 84 the impact of meeting EU climate-change targets.

Information and Communication Technologies (ICT) for energy Dr Mustafa Fazli, 86 efficiency in buildings: department of Researchers from the school of engineering, Dr Andriy Hryshchenko, international health, (IRUSE), and Professor Karsten Menzel, (ITin AEC), have recently provid- immunology and microbiology at the ed their contributions to the REEB book, (the European strategic research roadmap to ICT, enabled energy efficiency in buildings and construction). University of Copenhagen, 88 Denmark and Dr Robert Their contribution consists of a comprehensive analysis of ongoing re- Ryan, BIOMERIT research search in the EU with emphasis on ICT for energy efficiency in construc- centre, department of tion. For more information click here http://zuse.ucc.ie/reeb microbiology, UCC

67 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

Atlas of the Deep-water Seabed: Ireland: Elderly to benefit from Research Project ‘ELDERMET’: The Atlas of the Deep-water Seabed: Ireland, by Boris Dorschel, Andrew How the dietary strategies of the elderly can be improved, is the focus of a Wheeler, (both UCC), Xavier Monteys and Koen Verbruggen, (both Ge- UCC-based research project – ‘ELDERMET’. The project is investigating ological Survey of Ireland), launched in 2010, presents a unique insight the association between gut microbiota, food and health in the elderly in into the hidden world of the deep-water seabed off the of west Ireland. Ireland. ELDERMET is funded by the Department of Agriculture, Fisheries 3 and Food, and the HRB as part of the ‘Food for Health’ research initiative. 4 Gavin Burnell, (BEES), was awarded a CRC visiting expert fellowship to It is run in conjunction with Cork area hospitals and Teagasc, Fermoy. The enable him to spend six weeks in Australia advising state and industry ELDERMET consortium comprises a cross-institutional, multi-disciplinary 5 bodies on ways in which they might improve networking and communi- team led by Dr Paul O’Toole, (microbiology). The first major study from 9 cation in the aquaculture and fisheries sector. ELDERMET, a baseline description of the distinctive intestinal microbiota of older persons, was also published in the Proceedings of the National 19 Winning Images: Academy of Sciences USA in March 2011. The image chosen for the cover of the journal Biology of the Cell, for the 25 January 2010 issue, was taken from the article ‘Class 1 Rab 11- family in- 33 teracting proteins are binding targets for the Rab 14 GTPase’ by Eoin Kelly, Conor Horgan, Christine Adams, Tomasz Patzer, Deirdre Ni Shúilleabháin, and Jim Norman from Professor Mary McCaffrey’s laboratory, UCC. COLLEGE REPORTS Chemistry in the News:

38 Glantreo, a spin-out company founded by Dr Justin Holmes and Profes- sor Michael Morris from the department of chemistry, was named as the 48 Royal Society of Chemistry’s SME of the Month in November 2009. It went on to sign a €10m deal with a major US chromatography company 56 in 2010.

84 Teaching Highlights 86 BioDesign for health applications module wins EU award: A UCC-led project that includes several collaborating European universities, research centres and local enterprises, is the only Irish project to be 88 awarded funding under the EUI Lifelong Learning Erasmus Multilateral Projects 2011 programme. The project, led by Dr Padraig-Cantillon Mur- phy of the school of engineering and Dr Colm O’Tuathaigh of the school of medicine, has delivered a module which enables UCC engineering and medical undergraduate students to conduct interdisciplinary analysis of

68 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

BIOMERIT researchers strengthened links with France through Ulysses programme: Dr Marlies Mooij and Ronan McCarthy visited the research group of Dr Olivier Lesouhautier in the University of Rouen. Dr Lesouhautier and Anne-Sophie Blier from France were welcomed in the BIOMERIT 3 research centre in the department of microbiology earlier in the year 4 through the same programme. The collaborative research is investigating the interaction between host signals and bacterial pathogens, in particular 5 pseudomonas aeruginosa.

9 Postdoctoral scientist is joint winner of SFI/TIDA entrepreneurship 19 ‘Dragons Den’. Dr Jerry Reen, a senior postdoctoral scientist in the BIOMERIT research 25 centre in the department of microbiology, was the joint winner of the SFI 33 Technology Innovation Development Award (TIDA) ‘Dragons Den’ competition in May 2011. Dr Reen went on to spend a week at the Irish Inno- vation Centre (IIC) in Silicon Valley, California, USA. The visit, facilitated COLLEGE REPORTS by the SFI and hosted by the Irish Technology Leadership Group (ITLG), provided an opportunity to meet members of the venture community and 38 real world clinical problems in a clinical setting, with mentored learn- leading technology companies. Dr Reen’s presentation described small ing and training in structured innovation and problem solving. Partners compounds that prevent the formation of infectious microbial structures 48 from the small and medium local enterprise sector are working with the called biofilms which are a global economic and health burden estimated programme directors to provide commercialisation and business develop- to account for up to 80 per cent of microbial infections in the body and 56 ment skills for these students. The genesis of the module comes from the are exceptionally difficult to treat. The technology being developed is experience of Dr Cantillon-Murphy who recently returned to UCC from seeking to address this global concern through the use of non-antibiotic 65 Massachusetts Institute of Technology, (MIT), where a similar module is small compounds. offered to postgraduate students.

76 A first for the MSc in bioinformatics: The first class of the MSc bioinformatics with systems biology students 80 graduated in December 2010. The programme is coordinated by the de- 84 partment of microbiology and is jointly taught between the school of mathematical sciences and the school of computer science and information technology and the departments of biochemistry and microbiology. 86 SEFS has established a reciprocal relationship with the University of Notre Dame, USA, through the Naughton fellowship programme. UCC offers engineering programmes to Notre Dame students: UCC students can apply for fellowships to study at the University of Notre Dame. Brendan 88 Daly, a graduate of the school of engineering, is half way through the ESTEEM fellowship programme and is adding some UCC spirit to the Dr Jerry Reen, BIOMERIT, and ‘Fighting Irish’! Click here for more information: (http://graduateschool. Mr Cian Hughes of the ITLG nd.edu/admissions/financial-support/prestigious-fellowships/naughton- fellowships/)

69 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

Awards for Cork Constraint Computation Centre In May 2011, Minister for Research and Innovation, Seán Sherlock TD, The Cork Constraint Computation Centre, (4C), had a very strong year announced Government funding of €19.5m, together with an industry in 2010-2011, with an annual research funding budget of over €2.46m contribution of almost €4.8m, for the Centre for Telecommunications supporting over 55 staff, researchers and students. 4C’s funding sources Research (CTVR). 4C and the mobile and internet systems laboratory, included SFI, Enterprise Ireland, IRCSET, the European Union Framework both within the department of computer science, are the UCC groups 3 Programme, and direct funding from industry, including a new EU-funded involved in the SFI-funded programme under their Centre for Science, 4 project called e-POLICY, funded under the ICT theme of the EU 7th Engineering and Technology programme.The Tyndall National Institute, Framework Programme. UCC is also a partner. 5

9 Professor Barry O’Sullivan, (4C), was awarded a SFI PI award for a pro- In May 2010, Professor Barry O’Sullivan co-chaired a Dagstuhl seminar gramme of research titled ‘New Paradigms in Constraint Programming: ap- on ‘Constraint Programming meets Machine Learning and Data Min- 19 plications in data centres’, worth €1.06m over a four-year period. Professor ing’ at Schloss Dagstuhl in Germany. His co-chairs were: Professor Luc O’Sullivan was also awarded a SFI grant to collaborate with the HSE. The De Raedt (K.U. Leuven, BE); Professor Heikki Mannila (University of 25 grant supports a programme of research over a 12-month period worth Helsinki, FI); and Professor Pascal Van Hentenryck (Brown University, 33 over €150,000. Providence, USA).

EMC Corporation, the world leader in information infrastructure solu- Wellcome Trust award for microbiology researchers COLLEGE REPORTS tions, announced in April 2010 that it has expanded its cloud computing, Dr Robert Ryan and Dr Max Dow of the BIOMERIT research centre, big data, and data centre research programmes with the establishment received Wellcome Trust funding in November 2010 for research that 38 of EMC Research Europe. EMC has joined with UCC in Ireland as the focused on the regulation of virulence in bacterial pathogens. The award anchor university research partner for EMC Research Europe. The initia- was given, in conjunction with the structural biology group of Dr Martin 48 tive at UCC was led by Professor Barry O’Sullivan. Walsh, at Diamond Light Source, UK. The work is aimed at using state- of-the-art techniques in protein expression and structure determination 56 Professor Barry O’Sullivan co-chaired a workshop on artificial intelli- in combination with genetic and biochemical approaches to study how gence for data centres and cloud computing in August, alongside the bacteria respond to environmental stimuli to cause disease. 65 annual conference of the Association for the Advancement of Artificial Intelligence in San Francisco, USA. The other co-chairs were Donagh Buckley of EMC Ireland and Burt Kaliski of Verisign. 76

Wellcome Trust award recipients, Dr Max Dow and Dr Robert Health Research Award recipient Professor Michael Prentice Ryan, BIOMERIT research centre, department of microbiology and postdoctoral fellow on the project Dr Mingzhi Liang

70 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

Health research award for microbiology researcher athletics club website. In addition to being class representative for four Professor Michael Prentice, (microbiology and APC), received a Health years, he was also captain of the UCC Athletics Club 2009-2010, treasurer Research Award in July 2011 from the HRB patient-oriented research of the Rowing Club 2008-2009 and a medal winner in the 2009 indoor committee, to investigate the potential application of a novel method of athletics intervarsity competition. A close contender for the award and enhancing uptake and storage of phosphate by bacteria for the removal of recipient of the runner-up award was Sean Stack, BEng. 3 excess phosphate from patients with renal failure using dietary probiotic 4 bacteria. Accolades and recognition for Professor John Gamble: In 2010 the prestigious science periodical Journal of Volcanology and Geo- 5 UCC Partners in BioInnovate Ireland: thermal Research published a special volume honouring Professor John 9 The BioInnovate Ireland fellowship is a specialised training programme Gamble: ‘Making and Breaking the Arc’. To quote from the preface: “In in medical device innovation jointly developed and delivered by UCC and a thirty-year career, Professor John Gamble has made many diverse and 19 the Tyndall National Institute, NUIG, UL, DCU and the Royal College of fundamental contributions to our understanding of arc-related magmatic Surgeons. The programme was designed to ‘hot-house’, over a 10-month and volcanic systems.” At the annual meeting of fellows, Professor Gam- 25 period, talented individuals with multidisciplinary backgrounds to explore ble was elected an honorary fellow of the Royal Society of New Zealand. 33 innovations in medical devices. UCC‘s expertise in this area is already well Gamble, was also awarded the Volcanics and Magmatic Studies Group, established at undergraduate level, and in the development of successful (UK and Ireland), Award for 2011 from the Geological Society, London. medical device research programmes. The UCC contribution draws on COLLEGE REPORTS expertise from the school of engineering, the school of medicine, Tyndall, and the colleges of SEFS and medicine and health. The 2011 fellowship 38 team completed a cardiology clinical immersion phase, supervised by Professor David Kerins, in August 2011. 48 Awards for Teaching Excellence: 56 This year, SEFS launched two student-nominated awards for teaching excellence: the Outstanding Lecturer of the Year was awarded to Professor Peter 65 Jones (BEES), and the Outstanding Postgraduate Demonstrator Award was awarded to post graduate student Conor Sexton, (mathematical sciences).

76 First Irish student chapter for the Association for Computing Machinery: 80 The department of computer science is home to Ireland’s first student 84 chapter of the Association for Computing Machinery. In March 2011, Professor John Gamble, (BEES) the chapter hosted the second Irish collegiate programming contest, hav-

ing established the competition in 2010. The chairperson of the chapter Professor Colin Hill (microbiology and APC) was elected a member of 86 was Kevin Leo, a third-year computer science student. Professor Barry the Royal Irish Academy (RIA). Election to the RIA is the highest honour O’Sullivan is the faculty sponsor for the chapter. available to a scholar or scientist in Ireland. Professor Fergal O’Gara (microbiology) was appointed vice-president SEFS Graduate of the Year: of the RIA and has been elected to the RIA council representing the com- 88 The 2010 Graduate of the Year title was awarded to George Boyle, (BSc mittee of science. Professor O’Gara was first elected to the RIA in 2003. computer science, SEFS). In addition to excellent academic results, George Professor Thomas Cotter (head of biochemistry) was appointed to the also demonstrated outstanding extracurricular achievements including scientific advisory board of the Paris-based Institute de la Vision, Europe’s tutoring classmates, laboratory demonstrator, and the development of the largest vision research institute.

71 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

BEES head to be vice president of British Trust for Ornithology (broadband acoustic resonance dissolution spectroscopy), that can accu- Professor John O’Halloran (BEES) has been invited to become vice president rately identify the correct mixture ratio of a blend of different compounds of the British Trust for Ornithology, (BTO). Professor O’Halloran was pre- in solution. viously a member of the council of the BTO, and editor of its international journal, Bird Study. He is also a member of the Council of the European Translation goes global: 3 Ornithologists Union and board member of BirdWatch Ireland. The BTO Dr Pasha Baranov and Professor John Atkins, (biochemistry), received 4 is an independent, charitable research institute combining professional and a €461,342 grant from the Wellcome Trust to study recoding using ribos- citizen science, aimed at using evidence-of-change in wildlife populations, ome profiling. Ribosome profiling is a novel proteomics technology allow- 5 particularly birds, to inform the public, opinion-formers and environmental ing researchers to obtain high throughput data on protein synthesis. 9 policy decision-makers. Professor Barry O’Sullivan, (4C), was appointed to the newly established 19 International award for microbiology and APC scientists: chair of constraint programming, (computer science), and succeeded Pro- Professor Colin Hill and Professor Gerald Fitzgerald, (both UCC), and Dr fessor Eugene Freuder as director of 4C. UCC is the first university in the 25 Catherine Stanton and Professor Paul Ross, (both Teagasc), were awarded world to recognised the strategic importance of constraint programming 33 the International Dairy Federation Elie Metchnikoff Prize in Microbiology in developing next-generation software-based decision support tools. in 2010. The award is presented in recognition of outstanding research in the area of lactic acid bacteria. Professor Barry O’Sullivan was re-elected president of the International COLLEGE REPORTS Association for Constraint Programming, which is the premier association One-to-watch award: in the world for researchers working in the area of constraint programming. 38 Dr Dara Fitzpatrick was nominated for the One-to-Watch award as part It is responsible for organising the community’s annual conference, summer of the Enterprise Ireland Big Ideas Showcase 2010. The nomination was school, and awards. Professor O’Sullivan was also elected chairman of the 48 based on his development of a novel analytical technique termed BARDS, Artificial Intelligence Association of Ireland. This association represents Ireland at the European coordinating committee for artificial intelligence. 56 Dr Ken Brown has been appointed deputy director of 4C. Dr Brown is 65 a senior lecturer in the department of computer science, PI in CTVR, a SFI-funded centre for science, enginering and technology focusing on telecommunications; ITOBO, an SFI-funded strategic research cluster 76 focusing on intelligent buildings; and NEMBES, which is funded by PRTLI, 80 and is focused on sensor networks.

84 Student awards: (geology), was awarded the Cunningham Prize by the Hugh O’Leary Geological Survey of Ireland for his BSc thesis. The award is given annu- 86 ally to the two best geology mapping projects in Irish universities.

Tara Griffin (BEES), had the winning essay at the BSc Environmental Science Degree Undergraduate Awards of Ireland and Northern Ireland 2010. 88 Heather McLaughlin (microbiology), received the PhD category award for this year’s UCC BioSciences Institute Researcher of the Year competition.

72 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

Saranna Fanning was awarded a NUI Travelling Studentship. The student- Centocor Award for biotechnology graduates. ship allowed Saranna, a PhD student in the department of microbiology, Karen Williams, (MSc biotechnology), was awarded the annual Cento- to avail of the expertise in Dr Aaron Mitchell’s group in the USA to finalise cor bursary for academic excellence. her PhD research. Six Microbiology students received prestigious IRCSET 3 Farhan Manzoor (engineering), was awarded Best Student Paper Award postgraduate awards. 4 at the International Conference of IEEE RFID-TA 2010, (Radio Frequency The following PhD students each won IRCSET postgraduate research Identification-Technology and Application), in Guangzhou, China, for a awards worth €72,000: Eoghan Casey, to study ‘Characterisation of phage 5 paper titled ‘Indoor localisation of Passive RFID’. and phage-resistance systems in Lactobacillus delbrueckii’; Fiona Fouhy, 9 to study ‘Infant nutrition and gut flora composition’; Harsh Mathur, to Pfizer Postgraduate Scholarship in Biotechnology: study ‘Thuricin CD; a novel bacteriocin targeted againstClostridium diffi- 19 At the annual department of biochemistry research day in February 2010, cile’; Ronan McCarthy, to study ‘Identify novel treatment targets through Mary Leamy of Pfizer announced the launch of a two-year scholarship and the characterization of proteins that modulate Pseudomonas-infected 25 bursary that will operate in conjunction with the MSc in biotechnology cystic fibrosis lungs’; James Nolan, to study ‘The effect of a common -bac 33 programme. In 2010, Dr Justin McCarthy, director of the MSc biotech- terial metabolite, (HMB-PP), upon host metabolism and immunity’; and nology programme, presented the annual Pfizer postgraduate scholarship Amy O’Callaghan, to study ‘Genomics of bifidobacteria with industrial in biotechnology to Stephen Duggan and the annual Pfizer postgraduate applications’. COLLEGE REPORTS research bursary in biotechnology to Sandra O’Shea. Outreach and Student Recruitment:

38 SEFS continued to expand its outreach and recruitment activities with a diverse calendar of events for primary and secondary school students 48 throughout the year. Highlights included: 56 October Open Day: prospective students and their families enjoyed a wide range of interactive displays, programme talks, lab tours and entertainment 65 on campus.

73 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

National Science Week: hundreds of primary and secondary school stu- National Team Math Final held at UCC: second-level mathematics students visited UCC in November 2010 to participate in events including: dents gathered at UCC in March 2010 for the national final of ‘Team Math’, the Investigator Vortex; the Magic Mathsworks Travelling Circus; the following competitive countrywide heats. The competition takes the for- Good, the Bad and the Bubbly of Microorganisms, and science-themed mat of a table quiz where student teams work together to solve problems. junior treasure hunts. The problems are based on the higher Leaving Certificate core syllabus 3 and the participating students are some of the best mathematics students 4 Discovery Science Festival: 5,000 visitors enjoyed displays, experiments in Ireland. The preliminary round was organised by the Irish Mathematics and challenges at the UCC stand as part of this annual science festival in Teachers Association and the national final was organised by staff from 5 the City Hall, Cork. the school of mathematical sciences, UCC. Sixteen teams competed with 9 Christian Brothers College, Cork emerging as overall winners. BT Young Scientist and Technology Exhibition: young visitors to UCC 19 in January had the opportunity to experience some of the ground-breaking research underway in SEFS. 25

33 Engineers’ Week: celebrated in February 2011 with exciting events such as ‘Airmazing: engineering the future with pneumatics’. Transition-year placements and taster programmes were held throughout the year. SEFS staff COLLEGE REPORTS also attended regional student recruitment fairs and school career days.

38 Spring Open Day: 5,500 transition-year students and their teachers met with staff and students of SEFS at the interactive stands in the Western 48 Gateway building in April. Budding junior scientists had the opportunity to sample the excitement of many aspects of science through a series of 56 interactive summer camps.

65 Mathematics Enrichment Programme: secondary school students participate annually in the programme, initiated by Dr Donal Hurley and Professor Finbarr Holland, and run by staff of the school of mathematical The Eureka Centre (for inquiry-based 76 sciences. Forty secondary school students took part in the 2010 programme education in science and mathematics): 80 with eight of these students going on to compete in the Irish Mathemati- The centre aims to provide an interface to school pupils of all levels from cal Olympiad. Five students were listed in the national roll of honour and primary through to Leaving Certificate, and their teachers. The centre, 84 two became members of the six-member team to represent Ireland at the based in two purpose-built laboratories and a resource centre in the Kane, International Mathematics Olympiad. (science), building, is fitted with the equipment and resources required

for the second-level syllabuses, especially those in physics and chemistry. 86 Weekend enrichment sessions, summer camps, and Leaving Certificate revision classes are all held in this centre, along with in-service courses for teachers. The centre works closely with organisations such as the Irish Science Teachers Association, and the Irish Mathematics Teachers Asso- 88 ciation and have obtained some seed funding from British Telecom, and from PharmaChem Ireland.

74 UCC President’s Report 2010–2011 | College of Science, Engineering and Food Science

College of SEFS annual public lecture series Minister for Agriculture visits BEES The discipline of science has been responsible for the most amaz- Minister for Agriculture, Food and Marine, Simon Coveney, TD, vis- ing discoveries over the past 400 years: today the entire developed ited BEES at UCC in July, 2011. The Minister’s itinerary included a tour world is dependent on science-based technology. In the 2010 col- of aquaculture, fisheries, forestry, and plant science research facilities in lege of SEFS annual public lecture series, organised by Professor the school, along with a web-conference with BEES academics aboard 3 William Reville, a range of distinguished speakers discussed various the research vessel Celtic Explorer stationed at the mid-Atlantic ridge. 4 aspects of science and technology relevant to Ireland today. The The visit concluded with a presentation by the minister to invited public lecture series ran weekly from January through to March on guests, staff and students. Professor John O’Halloran, head of BEES, 5 Wednesday evenings. told the minister, “The impact of plant and forest research at UCC is 9 double the global average and we are actively delivering on the Gov- Recipient of the 2010 Alumnus Achievement award ernment’s agenda for research translation and commercialisation.” 19 Paul Ahern, BSc 1975, PhD 1979, senior vice-president of Indian- apolis-based pharmaceutical company, Eli Lilly, was the recipient 25 of the UCC Alumnus Achievement award for SEFS. An Alumnus 33 Achievement award is the highest honour UCC can bestow upon a graduate. COLLEGE REPORTS

86 (l-r): Professor John O’Halloran, head of BEES: UCC; Minister for Agriculture, Food and Marine, Simon Coveney, TD; Professor Pat Fitzpatrick, head of SEFS, UCC during the Minister’s visit to BEES 88

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76 80 CORK UNIVERSITY PRESS 84

76 UCC President’s Report 2010–2011 | Cork University Press

9 Publishing is in a state of flux with the growing e-book 19 sector. Cork University Press has joined with 60 other 25 university presses to provide e-books to the worldwide 33 library community. The University Press Contents Consortium, (UPCC), will be run by project MUSE, COLLEGE REPORTS which is the leading e-journal in the humanities and social sciences. The UPCC will launch in January 2012 38 with an expected collection of over 30,000 books. 48

Nine new CUP titles were published in 2010-2011: Bertram Windle: the Honan Bequest and the Modernisation 65 of University College Cork, 1904-1919, by Ann Keogh and Understanding Limerick: Social Exclusion and Change edited Dermot Keogh. Bertram Coghill Windle was a doctor, a scientist, an by Niamh Hourigan. The book gathers together recent innovative archaeologist, an anthropologist, a writer on English literature and 76 scholarly research on crime and social exclusion in Limerick city to evolution, and president of Queen’s/University College Cork. During 80 explain the context for regeneration. his time in Ireland between 1904 and 1919, he had a major impact on the development of higher education and the development of the 84 Queer Notions: New Plays and Performances from Ireland National University of Ireland. edited by Fintan Walsh with a foreword by Frank McGuinness. The Story of Irish Museums 1790–2000: Culture, Identity 86 “This is a very exciting collection which will make a vital contribution to literature on Irish theatre and drama studies. It will also greatly and Education, by Marie Bourke. “Dr Bourke has written a help in documenting the rich, challenging and vibrant nature of narrative account of museums in Ireland which is a valuable analysis, LGBTQ culture in Ireland. Perhaps most importantly, it should for not only does it offer the linked stories of institutions on an all- provoke and entertain a wide audience.” – Ivana Bacik, senator and island basis, but it places their development in the wider context of 88 Reid Professor of Law, Trinity College, Dublin. Britain, Europe and the United State.” – Professor Declan Kiberd

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Ireland, Design and Visual Culture: Negotiating Modernity Elizabeth Bowen’s Selected Irish Writings edited by Éibhear 65 1922-1992 edited by Linda King and Elaine Sisson, was launched Walshe. This anthology of the Irish writings of the Anglo-Irish by Ruairi Quinn, TD, he said: “I am delighted to launch this book on novelist, Elizabeth Bowen, (1899-1973), gathers together for the first Irish design which documents and acknowledges the importance of time, her Irish writings including her lectures, essays, reviews and 76 design to the cultural and economic life of the State.” reports, and includes an extensive introductory essay by the editor as 80 well as annotations and a critical bibliography. The Book of Howth: Elizabethan Conquest and the Old 84 English by Valerie McGowan-Doyle. The Book of Howth offers a Listen, O Isles, unto me: Studies in Medieval Word and Image in honour of Jennifer O’Reilly unique and extended Old English perspective on colonial conflict, edited by Elizabeth Mullins 86 displacement and identity formation in response to the Tudor and Diarmuid Scully. This interdisciplinary collection, which brings question of ‘failed’ conquest and the measures of reform government together new research on a range of patristic and medieval texts and it generated. visual materials, sets the cultural transformation of early medieval Ireland and Britain in the context of these islands’ inheritance from Roll Away the Reel World: James Joyce and Cinema edited by late antiquity and their engagement with the wider medieval world. 88 John McCourt, traces Joyce’s involvement in early modern cinema, his thematic and formal borrowing from this genre, and the impact of his writings on later avant-garde and mainstream cinema ranging from Godard to Rossellini to Scorsese.

78 UCC President’s Report 2010–2011 | Cork University Press

Four titles were republished in softback following strong hardback sales:

3 “Irish Blood, English Heart”: Second Generation Irish Musicians in England by Sean Campbell. 4 “Irish Blood, English Heart’ is a constantly intriguing and often provocative book about the complex process 5 – and peculiar freedom – of not wholly belonging to one culture or the other,” The Observer 9

19 Flann O’Brien: A Portrait of the Artist as a Young Post-Modernist by Keith Hopper “The highest praise I can give a critical book is that it makes me want to read or re-read the works discussed. Keith 25 Hopper’s book on Flann O’Brien does that. He makes reading Flann O’Brien sound like an exciting and 33 productive thing to do.” – J. Hillis Miller, University of California, Irvine

COLLEGE REPORTS Understanding Limerick: Social Exclusion and Change edited by Niamh Hourigan. “This book is original, innovative, nuanced and important. It is a major contribution to our understanding of how social 38 exclusion and inequality currently works within late-modern cities. It combines a remarkably powerful explanation of what has gone wrong in Limerick with strong evidence of how to move forward.” 48 – Professor Máirtín Mac an Ghaill, University of Birmingham 56 Going to the Well for Water: The Seamus Ennis Field Diary 1942-1946 edited by Ríonach Uí Ógáin. “…meticulously edited and translated into English by Ríonach uí Ógáin, this book is a stupendous 65 production, full of insight, gusto and intrepidity on the part of the author – and it comes complete with its editor’s valuable end-notes, and with evocative images, (mostly old photographs), on nearly every page.” – Patricia Craig, Irish Times 76

80 84 One general title was published:

86 Abuse: Domestic Violence, Workplace and School Bullying by Jim O’Shea. The book examines physical, emotional sexual and financial abuse, (not clerical or institutional). It also explores boundaries, and the way in which abuse serves as an invasion of these boundaries.

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76 80 BUILDINGS AND ESTATES 84

80 UCC President’s Report 2010–2011 | Buildings and Estates

Capital Developments University College Cork’s capital programme, valued at over €400m, continued 3 at pace during 2010-2011 with significant progress achieved on a number of key projects: 4 5 Western Gateway Building 9 The largest project of the current programme is the development of the Western 19 Gateway building. The building provides world-class facilities for teaching and research information technology and biomedical sciences. Phase one enabled the 25 consolidation of a number of IT-related academic units, including mathematics, computer science and SFI-funded IT research groups, to a single location 33 and provides associated incubation facilities, (gatewayUCC), for start-up software enterprises. The building houses lecture theatres with 1,400 seat capacity, COLLEGE REPORTS state-of-the-art audio visual capability, high-specification computer facilities and specialist medical teaching and research laboratories. A pedestrian bridge and riverside walk link the site to the Brookfield Health Sciences Complex. Phase 38 one, (the lower three floors of the five-floor building), was completed in July 48 2009 and the building first opened at the start of the 2009-2010 academic year. Fit-out of the upper two floors started in early 2011. The first phase of the fit-out 56 was completed in time for the 2011-2012 academic year, with the completion of laboratories for medical education. The departments of anatomy, physiology, pharmacology, and biochemistry moved their teaching activities from the 65 Windle building and Maltings complex into the building. The second phase of the fit-out, focused on PRTLI-funded research, will start in 2012. When it is 76 completed, the overall investment in the project will exceed €100m.

81 UCC President’s Report 2010–2011 | Buildings and Estates

Mardyke Pavilion and Mardyke Arena Ocean and Energy Research Facility Work is well advanced on two major sporting projects on the Mardyke. The UCC applied for planning approval for a new PRTLI5-funded ocean and Mardyke Pavilion has undergone a €1.5m refurbishment and extension, energy research facility at Ringaskiddy. The project is the initial development with improved changing facilities and a new function room. The Mardyke of the Irish Maritime and Energy Research Cluster, (IMERC), a collaboration 3 Arena is currently undergoing a major expansion in a €10m project. The between UCC, CIT and the Irish Naval Service. The site for the project is 4 project will deliver significant new changing and leisure facilities, a new being provided by IDA in conjunction with the Port of Cork. indoor sprint track, new fitness suites and studios and more. The project 5 will be completed in April 2012. The Mardyke’s outdoor running track and Cork Science and Innovation Park 9 floodlights are also due for upgrading in 2012. UCC is also one of the lead players in the proposed development of the 19 Cork Science and Innovation Park, (CSIP), at Curraheen. A master plan, prepared by Cork County Council, has been adopted and an advisory 25 board, comprising all the key institutional players and business leaders in 33 the project, is preparing a business plan for the development. The CSIP offers an opportunity for the region to grow knowledge-based employment by locating research facilities, high-potential start-ups, and high-end COLLEGE REPORTS manufacturing facilities on one site.

38 Clinical Research Facility at the Mercy University Hospital 48 UCC also started, in September 2011, the construction of the HRB-funded 56 interim Clinical Research facility at the Mercy University Hospital.

82 UCC President’s Report 2010–2011 | Buildings and Estates

HEA’s Devolved Grant for Summer Works Cork University Foundation The HEA’s devolved grant for summer works enables the university to The support of Cork University Foundation for the university’s physical address the ongoing maintenance deficit across the estate. A number development plan is crucial to the capital programme. UCC has a rela- of projects were advanced in 2010-2011 including the refurbishment of tively small land bank compared to other Irish universities. This creates 3 the geography building, further works at Áras na Laoi, North Mall, and significant pressure in accommodating the future development needs of 4 more. A long-term annual programme is required to address the issue the university. UCC continues to work with the HEA and with the local of backlog maintenance of the estate and we will continue to pursue the authorities to ensure the university is well positioned to meet its future 5 necessary funding for this programme. UCC has also been successful in development needs in a sustainable way. 9 achieving support for a number of energy improvement projects through SEAI’s better energy workplaces scheme. 19

25 Pedestrian Bridge at Perrott’s Inch

33 Planning approval has been secured for a new pedestrian bridge at Perrott’s Inch as part of the university’s privately-funded environmental plan. It is anticipated that construction will start in 2012. COLLEGE REPORTS

Flood Protection 38 Flood protection projects are also progressing to vulnerable parts of campus 48 in conjunction with our insurers.

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76 80 FINANCE 84

84 UCC President’s Report 2010–2011 | Finance

Overview Research The continuing deterioration in public finances resulted in a further -re Building on the success of recent years, an increase is once again antici- duction in Exchequer funding to the university, with a reduction of 14 per pated in the level of income from research grants and contracts. Research cent in core funding from the previous year to €52m. Since 2008, the core income now represents almost 28 per cent of UCC’s total income. 3 grant has now fallen by €31m. The significant growth in research funding takes place in an environment 4 Greater focus was once again put on the generation of non-Exchequer which is increasingly competitive, and where the availability of national 5 sources of income to compensate. As a result, along with the continued pro- funding has been reduced in recent years. UCC has been highly successful gramme of cost reduction and containment, the overall financial position in repositioning its sources of research funding away from national funding 9 was not compromised from the reduced levels of Exchequer funding. and focusing instead on EU and industry. 19 Of particular note is the continuing improved performance of the universi- We continue to be grateful for the support offered by the programmes 25 ty’s commercial activities. These, together with the university’s underlying sponsored by Science Foundation Ireland, the Higher Education Author- performance, have ensured that UCC was able to record a small surplus ity, in its Programme for Research in Third Level Institution, (PRTLI), the 33 in 2010-2011. Irish Research Council for Sciences, Engineering and Technology, the Irish Research Council for Humanities and Social Sciences and other State and COLLEGE REPORTS In turn, UCC has now cleared its former legacy deficit position, which international agencies. places the university in a more robust position to meet the acutely challenging funding environment both now and in the future. 38 The Future 48 Capital Development Undoubtedly, given the prevailing economic circumstances, 2011-2012 will be yet another financially challenging year. Exchequer funding will 56 While the deterioration in overall public finances has seen a reduction again be reduced, putting further pressure on all aspects of university ac- in Exchequer-funded capital development over recent years, UCC com- tivities, and ultimately, the quality of service provided. No improvement in 65 menced the €10m development of the Mardyke Arena complex despite national finances is anticipated up to 2015. In such an environment, UCC this limitation. In preparation for the Mardyke’s centenary celebrations in must position itself to minimise the impact of these economic shocks on 2012, the Mardyke Pavilion is also due to be redeveloped during 2012. the quality of offering to its students. 76 The university’s overall capital deficit position continues to improve, and UCC will continue to focus on alternative non-Exchequer sources of fund- 80 is now reduced to just over €13m at the end of 2010-2011. ing as well as alternative delivery mechanisms to ensure the university 84 maintains a financial environment that is both stable and sustainable into the future.

86 Despite national funding pressures, it is vital, if our university system is to remain internationally competitive and a driver of recovery, that an ap- propriate, stable, and predictable funding model for the sector is agreed, so as to avoid any further deterioration in the quality of services offered

to our students. 88

85 3

COLLEGE REPORTS

76 80 UCC GOVERNING BODY 84

86 UCC President’s Report 2010–2011 | UCC Governing Body 2010–2011

19 25 UCC Governing Body 2010-2011 33

COLLEGE REPORTS Chief Officer: Dr Michael Murphy Student Representatives: Graduates: Chairperson: Dermot Gleeson Keith Moynihan O’Brien, president, Diarmuid S. MacCárthaigh 38 Senior Officer: Professor Paul Giller Students’ Union Nollaig Ó Donnabháin 48 Dáithí Linnane, vice president, Professor Eleanor O’Leary Professors/Associate Professors: Students’ Union 56 Professor Caroline Fennell Lord Mayor of Cork: Cllr Dara Murphy Postgraduate Student: Professor Anita Maguire Mayor of Waterford: Cllr Mary O’Halloran Ian Murphy 65 Professor Ciaran Murphy Nominees of the Professor Grace Neville Nominees of External Organisations: National University of Ireland: 76 Professor Patrick O’Donovan Julie O’Neill Dr Thomas Cavanagh (PharmaChemical Ireland) Deirdre Somers 80 Academic Staff (other than Professors/ Douglas Kelleher Associate Professors): (IBEC) Nominees of the Councils of the 84 Michael Delargey John O’Callaghan administrative Counties of: Dr Barbara Doyle Prestwich (Cork City Partnership) Cork: Cllr John A. Collins 86 Piaras MacÉinrí John Mullins Waterford: Cllr Tom Higgins Dr Ciaran McCullagh (Cork Chamber of Commerce) Kerry: Cllr Tim Buckley Dr Norma Ryan Nominees of the Minister for Limerick: Cllr Eddie Wade

Staff (other than academic staff): Education and Science: 88 Joint County Councils of Tipperary: Francis McGrath Mary Hopkins Most Rev. Dr Dermot Clifford, Mary Steele Humphrey Murphy archbishop of Cashel and Emly Billy Walsh Dermot O’Mahoney Professor Douwe Breimer

87 3

COLLEGE REPORTS

76 80 INSTITUTIONAL RESEARCH 84 INFORMATION SYSTEM

88 Institutional Research Information System

Appendix of Research Highlights 2011-12

Summary

The Institutional Research Information System (IRIS) is an easy-to-use, web-based application that allows the UCC research community to maintain, update and publicise their research profiles. IRIS reduces the administrative burden placed on researchers by allowing their profile information to be re-used in multiple formats including Quality Review submissions, Research Quality Review submissions, and grant applications. The system significantly enhances the efficient and timely dissemination of UCC research strengths to key stakeholders.

This comprehensive report is presented as an appendix to the President’s Report. The report was generated from IRIS and highlights UCC’s research activities for the academic year 2011-12.

Click here to go to table of contents UCC Research Publications 2011–2012 | Contents ii

Contents

College of Arts, Celtic Studies, and Social Sciences ...... v Classics...... v School of Applied Psychology ...... vi School of Applied Social Studies ...... viii School of Asian Studies ...... xiii School of Education ...... xiv School of English ...... xix School of Geography and Archaeology: The Human Environment ...... xxiv School of History ...... xxix School of Irish Learning ...... xxxv School of Languages, Literatures, and Culture ...... xxxviii School of Music and Theatre ...... xlvi School of Sociology and Philosophy ...... xlix Study of Religions...... liv College of Business and Law ...... lvii Accounting, Finance, and Information Systems ...... lvii Centre for Policy Studies ...... lxii Economics...... lxiv Food Business and Development...... lxix Government ...... lxxii Law...... lxxv Management and Marketing...... lxxxii College of Medicine and Health ...... lxxxvi Medicine and Health Ofﬁce ...... lxxxvi School of Clinical Therapies ...... lxxxvi School of Medicine ...... lxxxix School of Nursing and Midwifery ...... cxxiv School of Pharmacy ...... cxxxviii University Dental School and Hospital ...... cxlvi College of Science, Engineering, and Food Science ...... cliii Abcrf...... cliii Return to Biochemistry...... cliv President’s Report Chemistry...... clvi Microbiology ...... clxv UCC Research Publications 2011–2012 | Contents iii

Physics...... clxxv School of Biological, Earth, and Environmental Sciences...... clxxviii School of Computer Science and Information Technology...... clxxxix School of Engineering...... cxcv School of Food and Nutritional Sciences...... ccviii School of Mathematical Sciences...... ccxiii Librarian and Director Information Service...... ccxviii Librarian and Director Information Service...... ccxviii Research Centres and Institutes...... ccxix Alimentary Pharmabiotic Centre...... ccxix Analytical and Biological Chemistry Research Facility...... ccxxx Anu Research Centre...... ccxxxvii BioTransfer Unit...... ccxlii Biomerit Research Centre...... ccxliii Biosciences Institute...... ccxlv Boole Centre for Research in Informatics...... ccxlvi CELT — Corpus of Electronic Texts...... ccxlvii Cancer Biology at UCC...... ccxlvii Centre for Atmospheric Chemistry...... ccxlviii Centre for Co-operative Studies...... ccxlviii Centre for Criminal Justice and Human Rights...... ccl Centre for Efficiency-Oriented Languages...... ccliii Centre for Investment Research...... ccliii Centre for Research in Vascular Biology...... ccliv Centre for Sustainable Livelihoods...... cclvi Centre for Unified Computing...... cclvii College of Business and Law...... cclviii Cork Constraint Computation Centre...... cclviii Cork Neuroscience Group...... cclxi Cryptography...... cclxiv Efficient Embedded Digital Signal Processing...... cclxv Eldermet...... cclxvi Environmental Research Institute...... cclxxv Forest Ecology...... ccxcii HRB Centre for Diet and Health Research...... ccxciv Human Factors Research Group...... ccxcv Human Molecular Reproduction Research Group...... ccxcvi Impact of Plant Nutrients on Primary Productivity...... ccxcvii Ionad Bairre...... ccxcviii Locus Project...... ccxcix Return to National Perinatal Epidemiology Centre...... ccc President’s Report Neonatal Brain Research Group...... ccc UCC Research Publications 2011–2012 | Contents iv

Northside Folklore Project...... ccciii Oral Health Research Centre...... ccciii PEI Technologies...... ccciv PLANFORBIO...... ccciv Sustainable Energy Research Group...... cccvi Tyndall National Institute...... cccix UREKA: Microbe Host Interaction...... cccx Ultrasonics Research Group...... cccxi VALORAM Project...... cccxi Tyndall National Institute...... cccxii

Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences v

College of Arts, Celtic Studies, and Social Sciences

Classics

Doulamis, Konstantin

Book Chapters • Doulamis, K.; (2011) ‘Ancient Greece and the Art of Storytelling in George Moore’s Aphrodite in Aulis’ In: Garcier, F. & Huguet, C (Eds.). George Moore: Without Borders. Amsterdam: Rodopi Publishing. • Doulamis, K.; (2011) ‘Forensic Oratory and Rhetorical Theory in Chariton Book 5’ In: Doulamis, K (Eds.). Echoing Narratives: Studies of Intertextuality in Ancient Greek and Roman Prose Fiction. Groningen: Barkhuis. • Doulamis, K.; (2011) ‘Literary mimesis and amatory persuasion in Xenophon of Ephesus’ In: Futre Pinheiro, M. & Morgan, J.R (Eds.). Literary Memory and New Voices in the Ancient Novel: The Intertextual Approach. Groningen: Barkhuis.

Edited Books • Doulamis, K (Ed.). (2011) Echoing Narratives: Studies of Intertextuality in Greek and Roman Prose Fiction, Groningen: Barkhuis Publishing.

Book Reviews • Doulamis, K; (2011) Review of H. Morales, Vision and Narrative in Achilles Tatius’ Leucippe and Clitophon.

Woods, David

Peer Reviewed Journals • Woods D; (2011) ‘Caligula’s Quadrans’. Numismatic Chronicle, 170:99–103. • Woods D; (2011) ‘Crowd-Control in Sixth-Century Clonmacnoise (Adomnán, VC 1.3)’. Ériu, 60:131–136. • Woods, D. (2011) ‘Tírechán on St. Patrick’s Writing Tablets’. Studia Celtica, 45:197–203. • Woods, D. (2011) ‘Which Gaius Julius Caesar (Suet. Calig. 8.1) ?’. Museum Helveticum, 68:154–160.

Book Reviews • Woods D; (2011) Review of D.F. Caner, History and Hagiography from the Late Antique Sinai (Liverpool, 2010). Classics Ireland 17 (2010). • Woods, D.; (2011) Review of C. Foss, Arab-Byzantine Coins, with a Catalogue of the Dumbarton Oaks Collection (Washington, DC, 2008). Journal Return to of Roman Archaeology 24. President’s Report • Woods, D.; (2011) Review of P. Cronin, Greek Popular Meteorology from Antiquity to the Present (Lampeter, 2010). Classics Ireland 17 (2010). UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences vi

• Woods, D.; (2011) Review of P.N. Bell, Three Political Voices from the Age of Justinian (Liverpool, 2009). Classics Ireland 17 (2010). • Woods, D.; (2011) Review of W.E. Kaegi, The Muslim Expansion and Byzantine Collapse in North Africa (Cambridge, 2010). Bryn Mawr Classical.

School of Applied Psychology

Di Blasi, Zelda

Dockray, Samantha

Peer Reviewed Journals • Dockray, S., Steptoe, A. (2011) ‘Chronotype and diurnal cortisol proﬁle in working women: Differences between work and leisure days’. Psychoneuroendocrinology. • Hamer, M., Ford, T., Stamatakis, E., Dockray, S., Batty, G.D. (2011) ‘Objectively measured secondhand smoke exposure and mental health in children: evidence from the Scottish Health Survey’. Archives of Paediatric and Adolescent Medicine. • Jackowksa, M., Dockray, S., Hendrickx, H., Steptoe, A. (2011) ‘Psychosocial factors and sleep efﬁciency: discrepancies between subjective and objective evaluations of sleep’. Psychosomatic Medicine.

Dorris, Derek

Conference Publications • Dorris, D.C., Power, D., & Keneﬁck, E. (2011) Investigating the effects of ego-depletion on the physical exercise routines of competitive athletes. 15th International Conference on Thinking. Queens University, Belfast. • Moran, A.P., McIntyre, T., Dorris, D. & Mahoney, G. (2011) Metacognition and Action: The Road Less Travelled. Symposium: Metacognition in Sport: 3, 2, 1. . . What do we know? 15th International Conference on Thinking. Queens University, Belfast.

Groeger, John A

Book Chapters • Groeger, J.A; (2011) ‘How many Es in Safety?’ In: B. Porter (ed) (Eds.). Handbook of Trafﬁc Psychology. New York: Elsevier. Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences vii

Peer Reviewed Journals • Dijk, D.J., Stanley, N., Groeger, J.A., & Deacon, S. ; (2011) ‘Enhanced SWS and Improved Sleep Maintenance after Gaboxadol Administration in a Traffic Noise Model of Transient Insomnia’. Journal of Psychopharmacology. • Groeger, J.A., Lo, J.C.Y., Burns, C.B., Dijk, D.J. ; (2011) ‘Effects of sleep inertia following daytime naps increase with executive load and vary with time of day’. Behavioral Neuroscience, 125 (2):252–260. • Kennedy, P.J., G. Clarke, G., Quigley, E.M.M., Groeger., J.A., Dinan., T.G., Cryan. J.F. ; (2011) ‘Gut Memories: Towards a Cognitive Neurobiology of Irritable Bowel Syndrome’. Neuroscience and Biobehavioral Reviews. • Lenné, M.G., Groeger, J.A., Triggs, T.J. (2011) ‘Contemporary use of simulation in traffic psychology research: Bringing home the Bacon?’. Transportation Research: Traffic Psychology & Behaviour, 14 (6):431–434. • Stephens, A.N. & Groeger, J.A. ; (2011) ‘Anger-congruent behaviour transfers across driving situations’. Cognition & Emotion.

Murphy, Mike

Peer Reviewed Journals • Goulding, E., Murphy, M. & Di Blasi, Z.; (2011) ‘Sharing and borrowing prescription medication: a survey of Irish college students’. Irish Journal of Medical Science, 180 (3):687–690. • O’Hanlon. J. Murphy, M., Di Blasi, Z.; (2011) ‘Experiences of sleep paralysis in a sample of Irish university students’. Irish Journal of Medical Science.

Murphy, Raegan

Books • Murphy. R; (2011) Dynamic assessment, intelligence and measurement. London: Wiley-Blackwell.

Peer Reviewed Journals • Cassimjee, N., Robbs, N. & Murphy, R; (2011) ‘Impulsive and rigid temperament subtypes and executive functioning: an exploratory study of temperament conﬁgurations and neuropsychological performance’. South African Journal of Psychology. • Murphy, R., Cassimjee, N. & Schur, C ; (2011) ‘Inﬂuence of socio-cultural factors on SRAVEN performance’. Journal of Psychology in Africa, 21 (1):x-x. • te Nijenhuis, J., Cho, S.H., Murphy, R. & Lee, K.H. (2011). ; (2011) ‘The Flynn effect in Korea: large gains’. Personality and Individual Differences. • te Nijenhuis, J., Murphy, R. & van Eeden, R. ; (2011) ‘The Flynn Effect in South Africa (published in Intelligence)’.

Book Reviews Return to President’s Report • Raegan Murphy; (2011) Dysgenics: Genetic Deterioration in Modern Populations. Second Revised Edition. Richard Lynn. London: Ulster Institute for Social Research, 2011. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences viii

Szczerbinski, Marcin

Book Chapters • Pietras, I., & Szczerbinski, M. ; (2011) ‘Ucze« posiada waskie horyzonty my±lowe — jak przekazywane sa informacje o uczniu w opiniach psychologiczno-pedagogicznych. [The student has narrow intellectual horizons: how information about students is conveyed in statements of special educational needs]’ In: Proceedings of the Word in language and text: theory and practice Conference, University of Podlasie, Siedlce. Siedlce: Wydawnictwo Uniwersytetu Podlaskiego.

• Szczerbinski, M. (2011) ‘Nauka i pseudonauka w terapii pedagogicznej [Science and pseudoscience in remediation of special educational needs]’ In: Maria Bogumiªa Pecyna (Eds.). Dysleksja rozwojowa — fakt i tajemnica w diagnostyce psychologiczno-pedagogicznej. Opole: Wydawnictwo Instytut Slaski.

Peer Reviewed Journals • Leyden, J., Stackhouse, J., & Szczerbinski, M.; (2011) ‘Implementing a whole school approach to support speech, language and communication: Perceptions of key staff’. Child Language Teaching and Therapy, 27 (2):203–222.

Veale, Angela

Book Chapters • Veale, A. & Kennedy, E. ; (2011) ‘Indian youth negotiating transnational identities’ In: Tyrrell, N et al (Eds.). The Changing Faces of Ireland: Exploring the Lives of Immigrant and Ethnic Minority Children. Amsterdam: Sense Publications. • Veale, A. ; (2011) ‘Fostering resilience in adolescents’ In: D. Skuse, H. Bruce, L. Dowdney, & D. Mrazek (Eds.). Child Psychology and Psychiatry: Frameworks for Practice. New Jersey: Wiley-Blackwell.

Peer Reviewed Journals • Dona, G. & Veale, A. ; (2011) ‘Divergent narratives, children & forced migration’. Journal of Ethnic & Minority Studies, 37 (8).

School of Applied Social Studies

Bantry White, Eleanor

Peer Reviewed Journals • Bantry White, E.,Montgomery, P.; (2011) ‘Electronic tracking for people with dementia: An exploratory study of the ethical issues experienced by carers in making decisions about usage’. Dementia.

Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences ix

Burns, Kenneth

Peer Reviewed Journals • Burns, K.; (2011) ‘’Career preference’,‘transients’ and ‘converts’: A study of social workers’ retention in child protection and welfare’. British Journal of Social Work, 41:520–538. • Burns, K.; (2011) ‘Book Review. Professional Decision Making in Social Work Practice by Brian Taylor’. Child and Family Social Work, 16:365–366.

Christie, Alastair

Book Chapters • Christie, Alastair; (2011) ‘White Children First? Whiteness, Child Protection Policies and the Politics of ‘Race’ in Ireland’ In: Children’s Rights and Child Protection: Critical Times and Critical Issues. Manchester: Manchester University Press.

Peer Reviewed Journals • Martin, Shirley, Christie, Alastair, Horgan, Deirdre and O’Riordan, Jacqui (2011) ‘’Often They Fall Through the Cracks’: Separated Children in Ireland and the Role of Guardians’. Child Abuse Review.

Book Reviews • Alastair Christie (2011) Book Review: Jeff Hearn and Keith Pringle with members of CROME, European Perspectives on Men and Masculinities: National and Transnational Approaches, Palgrave Macmillan, Basingstoke in Critical Social Policy, 31(1), pp. 152–154. • Alastair Christie (2011) Book Review: Lavalette, Michael (ed.) (2011) Radical Social Work Today: Social Work at the Crossroads, Bristol, Policy Press, in British Journal of Social Work, 41(7), pp. 1404–1416.

Considine, Mairead

Book Chapters • Considine, M. and Dukelow, F.; (2011) ‘Ireland and the impact of the economic crisis: upholding the dominant policy paradigm’ In: K. Farnsworth and Z. Irving (Eds.). Social policy in challenging times: economic crisis and welfare systems. Bristol: Policy Press.

Published Reports • Burke, S. and Considine, M. (2011) Annual National Report 2011, Pensions, Health and Long-term Care, Ireland. asisp/GVG on behalf of the European Commission DG Employment, Social Affairs and Equal Opportunities.

Dukelow, Fiona

Book Chapters Return to President’s Report • Considine, M. and Dukelow, F.; (2011) ‘Ireland and the impact of the economic crisis: upholding the dominant policy paradigm’ In: K. Farnsworth and Z. Irving (Eds.). Social policy in challenging times: economic crisis and welfare systems. Bristol: Policy Press. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences x

Peer Reviewed Journals • Dukelow, F.; (2011) ‘Economic Crisis and Welfare Retrenchment: Comparing Irish Policy Responses in the 1970s and 1980s with the Present’. Social Policy and Administration, 45 (4):408–429.

Forde, Catherine

Book Reviews • Mayo, M., Annette, J.; (2011) M. Mayo and J. Annette — Taking Part? Active Learning for Active Citizenship, and Beyond. UK.

Halton, Carmel

Peer Reviewed Journals • Halton, C. Powell, F.W. & Scanlon,M. (2011) ‘Continuing Professional Development (CPD) and Social Work’. The Irish Social Worker.

Hogan, Eileen

Conference Publications • Hogan, E. et al (2011) Critical Social Thinking, 2nd Annual Conference Proceedings.

Electronic Journals • Hogan, E. et al (2011) Critical Social Thinking: Policy and Practice, Vol. 3.

Horgan, Deirdre

Book Chapters • Horgan, D. Martin, S. & O’Riordan, J. (2011) ‘Adifferentiated Care System: Its Contribution to the Vulnerabilities’ In: Motmans Joz, Cuypers Daniël, Meier Petra, Mortelmans Dimitri & Zanoni Patrizia (Eds.). Motmans Joz, Cuypers Daniël, Meier Petra, Mortelmans Dimitri & Zanoni Patrizia (Eds.) (2011). Equal is not enough: challenging differences and inequalities in contemporary societies. Conference Proceedings. Antwerp. Antwerp: Policy Research Centre on Equal opportunities, University of Antwerp & Hasselt University. • Horgan, D., Martin, S. and O’Riordan, J. ; (2011) ‘Child Trafﬁcking in Ireland’ In: Darmody, M., Tyrrell, N. and Song, S (Eds.). The Changing Faces of Ireland: Exploring the Lives of Immigrant and Ethnic Minority Children. Boston: Sense Publications.

Edited Books • (2011). Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xi

Peer Reviewed Journals • Deirdre Horgan; (2011) ‘Child Slavery Now: A Contemporary Reader’. Community Development Journal. • Martin, S. Christie, C. Horgan, D. and O’Riordan, J.; (2011) ‘Often they fall through the cracks: Separated children in Ireland and the role of guardians’. Child Abuse Review, 20 (5):361–373. • Martin, Shirley, Christie, Alastair, Horgan, Deirdre and O’Riordan, Jacqui (2011) ‘’Often They Fall Through the Cracks’: Separated Children in Ireland and the Role of Guardians’. Child Abuse Review. Jenkinson, Hilary

Peer Reviewed Journals • Jenkinson, H; (2011) “Youth workers’ experiences of challenging behaviour: lessons for practice”. Emotional and Behavioural Difﬁculties, 16 (1):35–46. • Jenkinson, Hilary; (2011) ‘Anexploration of the importance of supervision practice in the voluntary sector’. Voluntary Sector Review, 2 (2):239–246. Leahy, Pat

Books • Leahy, Patrick, and Burgess, Paul (2011) Youth Participation in the Republic of Ireland. Cork City: Youth Work Ireland Cork. • Pat Leahy (With Emma Bennet and Aoife Farrell) (2011) Youthwork as a Response to Drugs Issues in the Community: A report on the Gurranabraher Churchﬁeld Drugs Outreach Project, Proﬁle, Evaluation and Future Development. Cork City: Youth Work Ireland Cork. Martin, Shirley

Book Chapters • Horgan, D., Martin, S. and O’Riordan, J. ; (2011) ‘Child Trafﬁcking in Ireland’ In: Darmody, M., Tyrrell, N. and Song, S (Eds.). The Changing Faces of Ireland: Exploring the Lives of Immigrant and Ethnic Minority Children. Boston: Sense Publications. Peer Reviewed Journals • Martin, S. Christie, C. Horgan, D. and O’Riordan, J.; (2011) ‘Often they fall through the cracks: Separated children in Ireland and the role of guardians’. Child Abuse Review, 20 (5):361–373. Meade, Rosemary R.

Peer Reviewed Journals • Meade, R ; (2011) ‘Government and Community Development in Ireland: The Contested Subjects of Professionalism and Expertise’. Antipode. Return to President’s Report • Meade, R and Shaw, M ; (2011) ‘Community development and the arts: Sustaining the democratic imagination in lean and mean times’. Journal of Arts & Communities, 2 (1):65–80. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xii

O’Connell, Cathal

Book Chapters • O’Connell Cathal; (2011) ‘Citizenship and Social Exclusion in Limerick’ In: Niamh Hourigan (Eds.). Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press.

O’Donovan, Orla

Book Chapters • O’Donovan, O. ; (2011) ‘The Irish health service’s Expert Advisory Groups: Spaces for advancing epistemological justice?’ In: H. Lofgren, E. de Leeuw and M. Leahy (Eds.). Democratising Health: Consumer Groups in the Policy Process. Cheltenham Glos: Edward Elgar.

O’Hadhmaill, Feilim

Conference Publications • O’hAdhmaill. F.; (2011) Participatory research as a teaching and learning tool for voluntary sector management students. ‘Engaging Minds’, Proceedings of the National Academy’s Fifth Annual Conference, 2011.

O’Haodain, Michael

Conference Publications • Micheal O’hAodain; (2011) Outsiders! — Exploring the Experiences of an African Student (with EU status) at University College Cork. In: Martin Flynn, Dr. Denis Staunton and Deirdre Creedon eds. Pathways to Education Connections Conference 2010: Access: Are we making the Right Connections?. • Pat Twomey, Jacqui O’Riordan and Micheal O’hAodain; (2011) You Can Do It!: Evaluating the Cork Traveller Mentoring Programme. In: Martin Flynn, Dr. Denis Staunton and Deirdre Creedon eds. Pathways to Education Connections Conference 2010: Access: Are we making the Right Connections?.

Published Reports • Micheal O’hAodain and Pat Twomey; (2011) Ten Years On: The Story of the Bishopstown Senior Social Centre, Wilton Park House 2001–2011. Bishopstown Senior Social centre in association with School of Applied Social Studies, UCC.

O’Riordan, Jacqui

Book Chapters Return to • Horgan, D., Martin, S. and O’Riordan, J. ; (2011) ‘Child Trafﬁcking in Ireland’ In: Darmody, M., Tyrrell, N. and Song, S (Eds.). The Changing Faces of President’s Report Ireland: Exploring the Lives of Immigrant and Ethnic Minority Children. Boston: Sense Publications. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xiii

Peer Reviewed Journals • O’Riordan, Jacqui, Feilim O’Adhmaill and Helen Duggan; (2011) ‘Understanding love labour’s role in understanding informal caring’. Irish Journal of Sociology.

Twomey, Pat

Published Reports • O’hAodain, M. and Twomey, P. (2011) Ten Years On: The story of the Bishopstown Senior Social Centre. Bishopstown Senior Social Centre. • Twomey, P., O’Riordan, J. and O’hAodain, M. (2011) You Can Do It: Evaluating the Cork Traveller Mentoring Programme. Pathways to Education.

Wilson, Mary

Conference Publications • Wilson, M. and Quirke, D. (2011) When words are not enough:facilitating angels in the funzone!. In: Keuchler, Carol., F eds. Groupwork: Bulding Bridges of Hope Minneapolis, USA, Sep/Oct 2005. School of Asian Studies

Xiong, Huan

Books • Xiong Huan; (2011) Body, Society and Sport: Sport in the Perspectives of Western Social Theories (in Chinese). Beijing: Contemporary China Publishing House.

Edited Books • Xiong Huan (Ed.). (2011) Readings in Chinese Literature, Zhejiang, China: Zhejiang Education Publishing House. • Zhang Lihua, Xiong Huan (Ed.). (2011) The Business Chinese Language and Culture- Elementary Volume II, Zhejiang, China: Zhejiang Education Publishing House.

Peer Reviewed Journals • Huan Xiong, Aihong Zhang; (2011) ‘Body, Society and Sport: Sport in the View of Western Socialist’. China Sport Science, 31 (6):81–86. • Huan Xiong; (2011) ‘Stratiﬁcation of Women’s Sport in Contemporary China’. The International Journal of the History of Sport, 28 (7):990–1015.

Conference Publications Return to President’s Report • Huan Xiong; (2011) Urbanisation and the Transformation of Women’s Sport in Contemporary China. In: Zheng Guohua eds. The 22nd Pan-Asian Congress of Sport & Physical Education Tsinghua University, Beijing, 2011–07–22- 2011–07–24. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xiv

School of Education

Bradley, John

Conference Publications • John Bradley, Tom Hill, Sabin Tabirca, Yin Jie Chen; (2011) Performance Nutrition Game. NAIRTL 5th Annual Conference — Engaging Minds: Active Learning, Participation and Collaboration in Higher Education.

Chambers, Fiona Catherine

Book Chapters • Chambers, F.C.; (2011) ‘Learning theory for effective learning in practice’ In: Kathleen Armour (Eds.). Sport Pedagogy: An Introduction for Coaching and Teaching. London: Prentice Hall. • Hall, K. & Chambers, F.C.; (2011) ‘Discourse Analysis’ In: K.M. Armour & D. MacDonald (Eds) (Eds.). Doing Research in Physical Education and Youth Sport. London: Routledge.

Peer Reviewed Journals • Chambers, FC, Armour, KM; (2011) ‘Do as we do and not as we say: teacher educators supporting student teachers to learn on teaching practice’. Sport Education and Society, 16:527–544.

Conference Publications • Armour, K., Chambers, F.C., Brandlbredenbeck, H.P., Carraro, A., Haerens, L. & Kirk, D.; (2011) Symposium on Sport and Exercise Pedagogy. European Conference on Educational Research, Berlin 12–16 September 2011–09–12- 2011–09–16. • Chambers, F.C., Armour, K, Luttrell, S., Herold, F.A., Bleakley, E.W. & Brennan, D.A.; (2011) The SCoTENS Trilateral Mentoring Project. AIESEP Conference, University of Limerick 2011–06–22- 2011–06–25. • Nation, U. & Chambers, F.C.; (2011) Continuing Professional Development: Nurturing the person-pedagogue. Educational Studies Association of Ireland: Partnerships: Relationships of Educational Purpose 2011–04–14- 2011–04–16.

• Walsh, J. & Chambers, F.C.; (2011) The Coaching Nexus: Research into action [LACE Coach Mentoring Programme]. AIESEP Conference, University of Limerick 2011–06–22- 2011–06–25.

Published Reports • Chambers, F.C., Armour, K., Bleakley, E.W., Brennan, D.A., Herold, F.A. & Luttrell, S.; (2011) Effective Mentoring in Physical Education Teacher Education. Standing Conference on Teacher Education North and South. Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xv

Conway, Paul

Book Chapters • Conway, P. F. & Brennan-Freeman, E. ; (2011) ‘The evolution of ICT policy in Ireland 1995–2010: progress, missed opportunities and future trends’ In: Marshall, K & Butler, D (Eds.). Schooling and ICTs in Ireland. Dublin: Liffey Press. • Conway, P. F., Murphy, R., Hall, K. & Rath, A. ; (2011) ‘Leadership and teacher education: Deepening engagement with pedagogy’ In: West-Burnham, J. & O’Sullivan, H (Eds.). Leading and Managing Schools. London: Sage. • Daly, T. & Conway, P. F.; (2011) ‘Moving beyond a state of stuck: School culture, mobile ICT integration and inclusion’ In: Marshall, K & Butler, D (Eds.). Schooling and ICTs in Ireland. Dublin: Liffey Press.

Peer Reviewed Journals • Conway, P. F. and Amberson, J. (2011) ‘Laptops meet schools, one-one draw: M-learning for secondary students with literacy difﬁculties’. Support for Learning, 26 (4):173–181.

Other Journals • Aisling Leavy, Dympna Devine, Paul Conway & Emer Smyth; (2011) ‘Editorial’ Irish Educational Studies.

Conference Publications • Conway, P. F., Delargey, M. Murphy, R. and O’Brien, S. ; (2011) Learning to teach in the context of reform-oriented mathematics. In: Dooley, T., Corcoran, D eds. Mathematics Education in Ireland 4 Dublin.

Manual • National Council for Special Education (NCSE) (2011) Inclusive Education Framework: A guide for schools on the inclusion of pupils with special education needs. Dublin: Manual.

Published Reports • Conway, PF; Murphy, R; Delargey, M; Hall, K; Kitching, K; Long, F; Mc Keon, J; Murphy, B; O’Brien, S; O’Sullivan, D. (2011) Learning to Teach (LETS): Developing curricular and cross curricular competences in becoming a ‘good’ secondary teacher. School of Education/DES, School of Education, UCC. [Executive Summary]. School of Education. • O’Mara, A. J., Akre, B., Marrero, I., Conway, P. F., & Cooper, C. ; (2011) International review of the literature on access to the curriculum for post-primary students with special educational needs. National Council for Special Education.

Crawford, Susan

Book Chapters Return to President’s Report • Staples, K.L., Reid, G., Pushkarenko, K., & Crawford, S.; (2011) ‘Physically Active Living for Individuals with ASD: Acquisition of Movement Skills’ In: In J.L. Matson and P. Sturmey, International Handbook of Autism and Pervasive Developmental Disorders. US: Springer Publishing. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xvi

Peer Reviewed Journals • Crawford S (2011) ‘Crawford S. (2011). An Examination of current Provision and Practice of Adapted Physical Activity for Children with Disabilities in Irish Schools’. European Physical Education Review, Vol. 17 (Issue 1):p91–109. • S. Crawford, R. O’Reilly & S. Luttrell (2011) ‘Assessing the effects of integrating the reﬂective framework for teaching and learning of undergraduate sport studies and physical education’. Reﬂective Practice, :1–15.

Delargey, Michael John

Hall, Kathy

Book Chapters • Conway, P. F., Murphy, R., Hall, K. & Rath, A. ; (2011) ‘Leadership and teacher education: Deepening engagement with pedagogy’ In: West-Burnham, J. & O’Sullivan, H (Eds.). Leading and Managing Schools. London: Sage. • Hall, K. & Chambers, F.C.; (2011) ‘Discourse Analysis’ In: K.M. Armour & D. MacDonald (Eds) (Eds.). Doing Research in Physical Education and Youth Sport. London: Routledge.

Kennedy, Declan

Books • Kennedy Declan (2011) Chemistry Live!. Dublin: Folens.

Book Chapters • Kennedy D (2011) ‘Learning Outcomes in Ireland — Implications for the Science Classroom’ In: S. Bernholt, K. Neumann, & P. Nentwig (Eds.). Making It Tangible: Learning Outcomes in Science Educatino. Munster Germany: Waxman.

Peer Reviewed Journals • Declan Kennedy (2011) ‘ICT in Science Education in Ireland’. Science, 45 (3):10–12. Return to President’s Report • Kennedy, Declan (2011) ‘Science Education in Ireland: The Contribution of the Irish Science Teachers’ Association’. Chemistry In Action, 83 (2):21–27. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xvii

Kitching, Karl

Book Chapters • Kitching, K.; (2011) ‘Taking educational risks with and without guaranteed identities: Freire’s ‘problem-posing’ and Judith Butler’s ‘troubling” In: Pedagogy, Oppression and Transformation in a ‘Post-Critical’ Climate: The Return of Freirean Thinking. London: Continuum. • Kitching, K.; (2011) ‘The mobility of racism in education: contested discourses and new migrant subjectivities in Irish schooling’ In: Merike Darmody, Naomi Tyrrell, and Steve Song (Eds.). The Changing Faces of Ireland: Exploring the Lives of Immigrant and Ethnic Minority Children. Rotterdam: Sense.

Peer Reviewed Journals • Karl Kitching; (2011) ‘Taking responsibility for race inequality and the limitless acts required: Beyond ‘good/bad whites’ to the immeasurably whitened self’. Power and Education, 3 (2):164–178.

• Kitching, K.; (2011) ‘Interrogating the changing inequalities constituting ‘popular’ ‘deviant’ and ‘ordinary’ subjects of school/subculture in Ireland: New migrant student recognition, resistance and recuperation’. Race Ethnicity and Education, 14 (3):293–311.

Long, Fiachra

Conference Publications • Fiachra Long (2011) Educating the transhuman. The Social Pathologies of Contemporary Civilisation. Cork, Sep 2011. • Fiachra Long (2011) Initial Teachers as Invisible Learners. Teaching in the new millenium. Dublin, Jun/Jul 2011.

• Fiachra Long (2011) The Tactile Spirit: Spirituality of the Child. Waterford IT, May 2011.

Published Reports • Conway, Hall et al. (2011) The Learning to Teach Study (LETS). Government Publications.

Mccarthy, Marian

Book Chapters • Marian McCarthy (2011) ‘Mapping the Journey: the implications of Multiple Intelligences and Teaching for Understanding for the Teaching of Civic, Social and Political Education’ In: Multiple Intelligences Curriculum and Assessment Project (Digital Version). Cork: NAIRTL.

Conference Publications • Cronin James, G R , Bettie Higgs, Marian McCarthy and Jacinta McKeon (2011) In at the Deep End: Graduate Teaching Assistants as Role Models in Return to the University. Engaging Minds: Proceedings of the NAIRTL 5th Conference. President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xviii

• Lynn Marsh, Marian McCarthy, Maria Caples, and Caroline Dalton, UCC, and Richard Windle and Helen Lavery, University of Nottingham (2011) Show me the learning — re-usable learning objects as an active learning experience and resource. Engaging Minds: Proceedings of NAIRTL’s 5th Conference. • Marian McCarthy (2011) Aligning Learning Outcomes, Learning Activities and Assessment. El Sistema de Creditos Transferibles (SCT) y los Desa ﬁos de al Innovacion y Armonizacion Curricular en la Formacion de Pregrado Pucon City, Chile. • Marian McCarthy (2011) The Human Being: The Ultimate Simulator. TEDx Series from Medical Faculty UCC on Simulcare: Simulation- The Ultimate Pretence http://tedxtalks.ted.com/browse/talks-by-event/tedxucc.

Published Reports • Marian McCarthy (2011) Multiple Intelligences Curriculum and Assessment Project. Final Report: Chapter 5 (digitised version). NAIRTL.

Mckeon, Jacinta C

Conference Publications • Cronin, James G.R. with Bettie Higgs, Marian McCarthy and Jacinta McKeon (2011) Engaging Minds: Proceedings of the National Academy of the Integration of Research and Teaching and Learning’s 5th Annual Conference. In-at-the-deep-end: graduate teaching assistants as role models in the university. • Cronin, James G.R. with Bettie Higgs, Marian McCarthy and Jacinta McKeon (2011) Engaging Minds: Proceedings of the National Academy of the Integration of Research and Teaching and Learning’s 5th Annual Conference. In-at-the-deep-end: graduate teaching assistants as role models in the university.

Published Reports • Conway, PF; Murphy, R; Delargey, M; Hall, K; Kitching, K; Long, F; Mc Keon, J; Murphy,B. (2011) Learning to Teach (LETS): Developing Curricular and Cross-curricular Competences in Becoming a ‘good’ secondary teacher. School of Education/DES, School of Education, Executive Summary, UCC.

Murphy, Brian

Peer Reviewed Journals • Concannon-Gibney, T. & Murphy, B. ; (2011) ‘School-based teacher professional development to transform the teaching of reading comprehension: an Irish case study’. Professional Development in Education.

O’Brien, Stephen

Peer Reviewed Journals Return to President’s Report • Brancaleone, D. and O’Brien, S.; (2011) ‘The (Economic) Value of Learning Outcomes: In Search of the Signs of Lost Knowledge’. British Journal of Sociology of Education, 32 (No. 4):501–519. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xix

• Long, F; O’Brien, S; (2011) ‘Bringing Polish Voices into Irish Education’. Irish Educational Studies. • O’Brien, S; Brancaleone, D; (2011) ‘Evaluating Learning Outcomes: In Search of Lost Knowledge’. Irish Educational Studies, 30 (1):5–21.

Allen, Graham

Books • Graham Allen; (2011) Intertextuality, 2nd Edition. London and New York: Routledge.

Book Chapters • Graham Allen and Matt Packer; (2011) ‘Three Provocations’ In: In Other Words: the place of text in modern art. Cork: Lewis Glucksman Gallery. • Graham Allen; (2011) ‘Returning to the Text of Frankenstein’ In: Readings on Audience and Textuality Materiality. Cambridge: Pickering and Chatto. • Grifﬁn, Carrie, Graham Allen and Mary O’Connell; (2011) ‘Introduction’ In: Grifﬁn, Carrie, Graham Allen and Mary O’Connell (Eds.). Readings on Audience and Textual Materiality. London: Pickering and Chatto.

Edited Books • Grifﬁn, Carrie, Graham Allen and Mary O’Connell (Ed.). (2011) Readings on Audience and Textual Materiality, London: Pickering and Chatto.

Peer Reviewed Journals • Graham Allen; (2011) ‘The Gift and the Return: Deconstructing Mary Shelley’s ‘Lodore’. Derrida Today, 4 (1):44–58. • Graham Allen; (2011) ‘review of Nicholas Royle’s Quilt’. Derrida Today, :137–142.

Other Journals • Graham Allen; (2011) ‘Aswan song from a formidable inﬂuence’. • Graham Allen; (2011) ‘The Public University and the Private Student, A False Dichotomy’ Campaign for the Public University.

Collins, Siobhan

Return to Books President’s Report • Siobhan Collins; (2011) Bodies, Politics and Transformations: John Donne’s Metempsychosis. Aldershot, England: Ashgate. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xx

Coughlan, Patricia

Book Chapters • Coughlan, Patricia; (2011) ‘Doubles, Shadows, Sedan-Chairs, and the Past: The Ghost Stories of J.S. Le Fanu’ In: Gary William Crawford, Jim Rockhill, Brian J. Showers (Eds.). Reﬂections in a Glass Darkly: Essays on J. Sheridan Le Fanu. New York: Hippocampus Press. • Coughlan, Patricia; (2011) ‘Without a blink of her lovely eye: The Pleasure of Eliza Lynch and Visionary Scepticism’ In: Claire Bracken and Susan Cahill (Eds.). Anne Enright. Dublin: Irish Academic Press.

Davis, Alex

Book Chapters • Davis, Alex; (2011) ‘’And this is Kedging in Time: Post/Modernism and the Genre of Elegy” In: Joe Francis Doerr (Eds.). The Salt Companion to John Matthias. Cambridge: Salt. • Davis, Alex; (2011) ‘Hughes and His Critics’ In: Terry Gifford (Eds.). The Cambridge Companion to Ted Hughes. Cambridge: Cambridge University press.

• Davis, Alex; (2011) ‘Material Modernism and Yeats’ In: Graham Allen et al (Eds.). Readings on Audience and Textual Materiality. London: Pickering & Chatto.

Peer Reviewed Journals • Davis, Alex; (2011) ‘J. M. Synge’s Vita Vecchia and Aucassin et Nicolette’. Notes and Queries, 58 (1):125–127.

Book Reviews • Alex Davis (2011) Matthew Hart, Nations of Nothing but Poetry.

Etienne, Anne

Book Chapters • Anne Etienne; (2011) ‘Pond Life and Angels: Enda Walsh’s Adaptations to Cork’ In: Drama Reinvented: Theatre Adaptations in Ireland 1970–2007. London: Peter Lang.

Faulkner, Mark

Book Chapters

Return to • Mark Faulkner; (2011) ‘The Spatial Hermeneutics of Lucian’s De laude Cestrie’ In: Mapping the Medieval City: space, place and identity in Chester President’s Report c. 1200–1500. Cardiff: University of Wales Press. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxi

Peer Reviewed Journals • Mark Faulkner; (2011) ‘Archaism, Belatedness and Modernization: ‘Old’ English in the Twelfth Century’. The Review of English Studies. • Mark Faulkner; (2011) ‘Gerald of Wales and Standard Old English’. Notes and Queries, 58 (1):1–6.

Other Journals • Mark Faulkner; (2011) ‘Review of Matti Kilpio, Leena Kahlas-Tarkka, Jane Roberts, and Olga Timofeeva (eds), Anglo-Saxons and the North (2009)’ Notes and Queries, n. s. 58 (4):606–608.

Grifﬁn, Carrie

Book Chapters • Griffin, Carrie and Mary O’Connell; (2011) ‘Charles Clark, His Books, and His Bookplate Poem’ In: Griffin, Carrie, Graham Allen and Mary O’Connell (Eds.). Readings on Audience and Textual Materiality. London: Pickering and Chatto. • Griffin, Carrie, Graham Allen and Mary O’Connell; (2011) ‘Introduction’ In: Griffin, Carrie, Graham Allen and Mary O’Connell (Eds.). Readings on Audience and Textual Materiality. London: Pickering and Chatto. • Griffin, Carrie; (2011) ‘The Forresters Manuscript: A Book on the Margins?’ In: Knight, Stephen (Eds.). Robin Hood in Greenwood Stood: Alterity and Context in the English Outlaw Tradition. Turnhout, Belguim: Brepols.

Edited Books • Grifﬁn, Carrie, Graham Allen and Mary O’Connell (Ed.). (2011) Readings on Audience and Textual Materiality, London: Pickering and Chatto.

Peer Reviewed Journals • Grifﬁn, Carrie; (2011) ‘Alliterative Verse and Lyrics’. The Year’s Work in English Studies, 90 (1):223–232. • Grifﬁn, Carrie; (2011) ‘Lynes of my Lore: The Mark of Mars and Physiognomy in the York Play of The Conspiracy’. The Medieval Journal, 1 (2):23–42.

Other Journals • Grifﬁn, Carrie; (2011) ‘Review, Cynthia J. Cyrus, The Scribes for Women’s Convents in Late Medieval Germany (Toronto UP)’ :1–4.

Book Reviews • Griffin, Carrie; (2011) Catherine Skeen (ed)., William Dunkin’s The Parson’s Revels (Dublin: Four Courts Press, 2010). Irish Literary Supplement. • Griffin, Carrie; (2011) Joan Fitzpatrick (ed.), Renaissance Food from Rabelais to Shakespeare: Culinary Readings and Culinary Histories. Notes and Quer. Return to President’s Report • Griffin, Carrie; (2011) Rosamond McKitterick, Perceptions of the Past in the Early Middle Ages (Notre Dame UP, 2006). Journal of American Folklore. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxii

Jenkins, Lee

Book Chapters • Jenkins, Lee M.; (2011) ‘Interculturalism’ In: Dowson, Jane (Eds.). The Cambridge Companion to British and Irish Women’s Poetry. Cambridge: Cambridge University Press. • Jenkins, Lee M; (2011) ‘X/Self: Kamau Brathwaite at the Crossroads’ In: Matterson, Stephen; Collins, Lucy (Eds.). Aberration in Poetry: Essays on Atypical Works. London: McFarland.

Edited Books • Lee M. Jenkins and Alex Davis (Ed.). (2011) The Locations of Literary Modernism (paperback), Cambridge: Cambridge University Press.

Laird, Heather

Book Reviews • Heather Laird (2011) Review of Mark Mossman, Disability, Representation and the Body in Irish Writing, 1800–1922, Victorian Studies.

Monahan, Barry

Other Journals • Barry Monahan; (2011) ‘AMasala of Musicals: Short Film Incentives by Bord Scannán Na hÉireann (The Irish Film Board)’ Estudios Irlandeses: Spanish Journal of Irish Studies, Volume 6.

Murphy, Orla

Book Chapters • Orla Murphy; (2011) ‘Intermediality: Experiencing the Virtual Text’ In: Readings on Audience and Textual Materiality. London: Pickering and Chatto.

Other Journals • Orla Murphy; (2011) ‘BAR — New Voices on Early Medieval Sculpture in Britain and Ireland’. 542.

Journal Volume Edited • Various; (2011) Aigne — International Peer Reviewed Journal of the College of Arts, Celtic Studies and Social Sciences at University College Cork. University College Cork. Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxiii

O’Connor, Maureen

Book Chapters • Maureen O’Connor (2011) ‘The Smithy of Stephen Dedalus’ Soul: Contexts for Joyce’s Novel’ In: Al Wachtel (Eds.). Critical Insights: A Portrait of the Artist as a Young Man. Pasadena: Salem Press.

Okasha, Elisabeth

Books • Elisabeth Okasha; (2011) Women’s names in Old English. Farnham: Ashgate.

Book Chapters • C. J. Lynn and J. A. McDowell (eds); (2011) ‘The Text on the Motif-piece’ In: Deer Park Farms: The Excavation of a Raised Rath in the Glenarm Valley, Co. Antrim. Belfast: Stationery Ofﬁce. • E. Mullins and D. Scully; (2011) ‘From Conception to Birth in Anglo-Saxon England’ In: Listen, O Isles, unto Me: Studies in Medieval Word and Image in honour of Jennifer O’Reilly. Cork: Cork University Press.

Peer Reviewed Journals • Elisabeth Okasha; (2011) ‘Crosses in Inscriptions’. Nottingham Medieval Studies. • Elisabeth Okasha; (2011) ‘The Staffordshire Hoard inscription and other Biblical texts in Anglo-Saxon inscriptions’. The Medieval Journal, 1 (1):23–35.

• Leahy, K,Bland, R,Hooke, D,Jones, A,Okasha, E; (2011) ‘The Staffordshire (Ogley Hay) hoard: recovery of a treasure’. Antiquity, 85:202–220. • Leahy, Kevin; Bland, Roger; Hooke, Della; Jones, Alex; Okasha, Elisabeth; (2011) ‘The Staffordshire (Ogley Hay) hoard: recovery of a treasure’. Antiquity, 84:215–220.

Rooney, Kenneth

Books • Kenneth Rooney; (2011) Mortality and Imagination: the Life of the Dead in Medieval English Literature. Turnhout: Brepols.

Book Chapters • Rooney, Kenneth; (2011) ‘Romance Macabre: Middle English Narrative and the Dead in the Codex’ In: Knoll, Stefanie, and Sophie Oosterwijk (Eds.). Mixed Metaphors: The Dance of Death in Medieval And Early-Modern Europe. Newcastle-upon-Tyne: Cambridge Scholars. Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxiv

Walshe, Eibhear

Books • Eibhear Walshe (2011) Oscar’s Shadow. Cork: Cork University Press. Book Chapters • Eibhear Walshe (2011) ‘The Indeﬁnable Ghosts of the Past’ In: Eibhear Walshe (Eds.). Elizabeth Bowen’s Selected Irish Writings. Cork: Cork University Press. Edited Books • Eibhear Walshe (Ed.). (2011) Elizabeth Bowen’s Selected Irish Writings, Cork: Cork University Press. Book Reviews • Eibhear Walshe (2011) In the Company of Strangers. • Eibhear Walshe (2011) The Myth of Manliness in Irish National Culture. • Eibhear Walshe (2011) The Sealed Letter. The Irish Times. School of Geography and Archaeology: The Human Environment

Bartlett, Darius

Conference Publications • R. Canessa, D. Bartlett, H. Huang, S.R.J. Gray, S.A. Gray, M. Falaleeva; (2011) Modelling and visualising vulnerability of coastal systems to environmental change. CoastGIS 2011 Oostende, Belgium, 2011–09–05- 2011–09–08. • S.R.J. Gray, R. Canessa, D. Bartlett, H. Huang, S.A. Gray, M. Falaleeva; (2011) Seeing another’s perspective: the role of spatialised fuzzy cognitive mapping and visualisation in conﬂict resolution, stakeholder participation and knowledge integration for marine spatial planning. LOICZ Open Science Conference 2011, Coastal Systems, Global Change and Sustainability. Butler, David J.

Journal Volume Edited • Butler, David J.; (2011) Journal of The Butler Society 5:1. Kilkenny. Cleary, Rose

Books Return to President’s Report • Cleary, R. M. and Kelleher, H (2011) Archaeological excavations at Tullahedy County Tipperary Neolithic Settlement in North Munster. Cork: Collins Press. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxv

Kenna, Therese

Peer Reviewed Journals • Kenna, T; (2011) ‘Studentiﬁcation in Ireland? Analysing the impacts of students and student accommodation on Cork City (in press)’. Irish Geography, 44 (2).

Linehan, Denis

Book Chapters • Denis Linehan and Joao Sarmento; (2011) ‘Spacing Forgetting: The Birth of the Museum at Fort Jesus, Mombasa, and the Legacies of the Colonization of Memory in Kenya’. In: Heffernan, M, Meusburger, P. and Wunder, E (Eds.). Cultural Memories. Dordrecht: Springer.

Ni Laoire, Caitriona

Books • Ni Laoire, C., Carpena-Mendez, F., Tyrrell, N. and White, A.; (2011) Childhood and Migration in Europe: portraits of mobility, identity and belonging in contemporary Ireland. UK: Ashgate.

Book Chapters • Ni Laoire, C; (2011) ‘Return migrants and boundaries of belonging’ In: Globalization, Migration and Social Transformation: Ireland in Europe and the world. Aldershot: Ashgate.

Peer Reviewed Journals • Ni Laoire, C; (2011) ‘’Girls just like to be friends with people: gendered experiences of migration among children and young people in returning Irish families’. Childrens Geographies. • Ni Laoire, C; (2011) ‘Narratives of ‘innocent Irish childhoods’: return migration and intergenerational family dynamics’. Journal of Ethnic and Migration Studies. • White, A., Ní Laoire, C., Tyrrell, N. and Carpena-Méndez, F.; (2011) ‘Guest editorial: Children’s roles in transnational migration’. Journal of Ethnic and Migration Studies.

O Donnabhain, Barra

Book Chapters • O’Donnabhain, B. (2011) ‘Various contributions’ In: Cahill, M.; Sikora, M (Eds.). Breaking Ground, Finding Graves¯ reports on the excavations of burials by the National Museum of Ireland, 1927—2006 Volumes 1 and 2. Bray: Wordwell. Return to President’s Report • O’Donnabhain, B; (2011) ‘The social lives of severed heads: skull collection and display in medieval and early modern Ireland’ In: Bonogofsky, M (Eds.). The Bioarchaeology of the Human Head: decapitation, decoration and deformation. Gainesville: University Press of Florida. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxvi

• Sikora, Maeve; O’Donnabhain, Barra; Daly, Niamh (2011) ‘Preliminary report on a Viking warrior grave at War Memorial Park, Islandbridge’ In: Medieval Dublin XI. Dublin: Four Courts Press.

O’Connor, Raymond

Book Chapters • O’Connor, R. (2011) ‘The Irish Agricultural Organisation Society and co-operative credit societies in Ireland 1894–1915’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork. • O’Connor, Ray (2011) ‘Co-operative credit societies and credit unions 1926–1950’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

• O’Connor, Ray (2011) ‘Muintir na Tire, credit unions and the Rathmore District’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

• O’Connor, Ray (2011) ‘The Irish credit union movement in context 1951–1958’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

• O’Connor, Ray (2011) ‘The diffusion of co-operative credit societies in Ireland 1894–1910’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

• O’Connor, Ray (2011) ‘The emergence of the modern credit movement, 1951–1958’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

• O’Connor, Ray (2011) ‘The role of third level adult education initiatives as a catalyst for the emergence of the modern credit union movement in Ireland’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

• Power, C., O’Connor, R., McCarthy, O. and Ward, M. (2011) ‘Credit unions and community wellbeing’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

Edited Books • Power, C., O’Connor, R., McCarthy, O. and Ward, M (Ed.). (2011) The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating Return to the Centenary of the Birth of Nora Herlihy, Cork: Centre for Co-operative Studies, University College Cork. President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxvii

O’Rourke, Eileen

Peer Reviewed Journals • O’Rourke, E., Kramm, N.; (2011) ‘High Nature Value (HNV) Farming and the Management of Upland Biodiversity: A Review’. East European Countryside Journal.

Pinhasi, Ron

Book Chapters • Pinhasi, R., Stefanovic, S., Papathanasiou, A,, Stock, J.; (2011) ‘Variability in long bone growth patterns and limb proportions within and among Mesolithic and Neolithic populations from southeast Europe’ In: The Bioarchaeology of the Transition to Agricluture. New York: Wiley-Liss. • Pinhasi, R., & Meiklejohn, C.; (2011) ‘Dental reduction and the transition to agriculture in Europe’ In: The Bioarchaeology of the Transition to Agricluture. New York: Wiley-Liss. • Stock, J.T. & Pinhasi, R.; (2011) ‘Introduction. Changing paradigms in our understanding of the transition to agriculture: Human bioarchaeology, behaviour and adaptation’ In: The Bioarchaeology of the Transition to Agricluture. New York: Wiley-Liss.

Edited Books • Pinhasi, R. & Stock, J (Ed.). (2011) The Bioarchaeology of the Transition to Agricluture, New York: Wiley-Liss.

Peer Reviewed Journals • Pinhasi R., Blockley, S; (2011) ‘Arevised chronology for the adoption of agriculture in the Southern Levant and the role of Lateglacial climatic change’. Quaternary Science Reviews, 30:96–108. • Pinhasi, R., Higham, T.F.H., Golovanova, L.V., Doronichev, V.B.; (2011) ‘Revised age of late Neanderthal occupation and the end of the Middle Paleolithic in the northern Caucasus’. Proceedings of the National Academy of Sciences of the United States of America.

Rynne, Colin

Peer Reviewed Journals • Colin Rynne (2011) ‘Technological continuity, technological ‘survival’: the use of horizontal mills in western Ireland, c. 1632–1940’. Industrial Archaeology Review, XXXIII (2):94–103.

Sage, Colin

Books Return to President’s Report • Sage, C; (2011) Environment and Food. Abingdon, Oxon, UK: Routledge. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxviii

Book Chapters • Sage, C; (2011) ‘Conventions of Quality and Governance of Artisan Food: Revealing the tyranny of ‘sound science’ in the regulation of Irish raw milk cheese’ In: Keohane, K. and O’Mahony, P (Eds.). Irish Environmental Politics: The communicative turn. Manchester: Manchester University Press.

Other Journals • Colin Sage (2011) ‘Combustili fossili e acqua dolce: Sﬁde per il sistema globale dell’alimentazione’ Ambiente Societa Territorio, 56 (5):8–12.

Sheehan, John

Book Chapters • Emer Purcell, Paul MacCotter, Julianne Nyhan, John Sheehan; (2011) ‘The Fortunes of CELT’ In: Clerics, Kings and Vikings: essays on Medieval Ireland. Dublin: Four Courts Press. • John Sheehan and Steffen Stummann Hansen; (2011) ‘Perspectives on the Faroese ‘Irish question” In: Clerics, Kings and Vikings: Studies on Medieval Ireland. Dublin: Four Courts Press. • John Sheehan; (2011) ‘Bullion rings in Viking Age Britain and Ireland’ In: Svavar Sigmundsson (Eds.). Viking settlements and Viking society: papers from the proceedings of the Sixteenth Viking Congress, Iceland 17th-23rd August 2009. Reykjavik: University of Iceland Press. • John Sheehan; (2011) ‘Bullion rings’ In: The Cuerdale hoard and related Viking-age silver and gold, from Britain and Ireland, in the British Museum. London: British Museum. • John Sheehan; (2011) ‘Hiberno-Scandinavian broad-band arm-rings’ In: The Cuerdale Hoard and related Viking-age silver and gold, from Britain and Ireland, in the British Museum. London: Brotish Museum. • John Sheehan; (2011) ‘Viking raiding, gift-exchange and Irish metalwork in Norway’ In: Early Medieval Art and Archaeology in the Northern World. Turnhour: Brepols.

Edited Books • E. Purcell, P. MacCotter, J. Nyhan, J. Sheehan (Ed.). (2011) Clerics, Kings and Vikings: Studies on Medieval Ireland, Dublin: Four Courts Press.

Other Journals • T. O Carragáin, P. MacCotter and J. Sheehan; (2011) ‘Making Christian Landscapes in Corca Duibne’ Journal of the Group for the Study of Irish Historic Settlement.

White, Allen

Books Return to President’s Report • Ni Laorie, C. Carpena-Mendez, F. Tyrell, N and White, A; (2011) Childhood and Migration in Europe: Portraits of Contemporary Ireland. London: Ashgate. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxix

Peer Reviewed Journals • Allen White ; (2011) ‘Every Wednesday I am Happy: Childhoods in an Irish Asylum Centre’. Population Space And Place. • Gilmartin, M. and White, A.; (2011) ‘Interrogating Medical Tourism: Ireland, Abortion, and Mobility Rights’. Signs: Journal of Women in Culture and Society, 36 (2). • White, Allen, Ni Laoire, Caitriona, Tyrell (nee Bushin), Naomi and Carpena-Mendez, Fina; (2011) ‘Editorial Children’s Roles in Transnational Migration’. Journal of Ethnic and Migration Studies.

Ó Carragáin, Tomás

Book Chapters • Tomás Ó Carragáin; (2011) ‘Patterns of patronage: churches, round towers and the Dál Cais kings of Munster’ In: R. Stalley (Eds.). Medieval Art and Architecture in Limerick and South-West Ireland. British Archaeological Association Conference Transactions Series. Vol. 34. Leeds: Maney.

• Tomás Ó Carragáin; (2011) ‘Recluses, relics and corpses: interpreting St Kevin’s House’ In: C. Doherty, L. Doran and M. Kelly (Eds.). Glendalough: City of God. Dublin: Four Courts.

• É. Ó Carragáin and T. Ó Carragáin; (2011) ‘Singing in the rain on Hinba? Archaeology and liturgical ﬁctions, ancient and modern: Adomnán, Vita Columbae III.17’ In: E. Mullins and D. Scully (Eds.). Listen, O Isles, unto me: Studies in Medieval Word and Image in Honour of Jennifer O’Reilly. Cork: Cork University Press.

Peer Reviewed Journals • Tomás Ó Carragáin; (2011) ‘St Mullin’s, Co. Carlow and the archaeology of early medieval baptism’. Peritia, 21.

Newsletter • Tomás Ó Carragáin, Paul MacCotter and John Sheehan; (2011) Making Christian Landscapes in Corcu Duibne. Dublin: Newsletter.

School of History

Aan De Wiel, Jerome

Peer Reviewed Journals • Jerome aan de Wiel (2011) ‘French military intelligence and Ireland, 1900–1923’. Intelligence and National Security.

Other Journals

Return to • Jerome aan de Wiel (2011) ‘The Irish Factor in the Outbreak of War in 1914’ History Ireland. President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxx

Boggi, Flavio

Book Chapters • Boggi, Flavio, & Robert Gibbs (2011) ‘Lippo di Dalmasio e la Madonna del Padiglione in san Domenico a Pistoia’ In: Coco, Alberto & Alessandro Cortesi (Eds.). Tracce di arte e di spiritualità in San Domenico di Pistoia. Florence: Nerbini.

Peer Reviewed Journals • Boggi, Flavio (2011) ‘John Hogan’s busts for Bantry, and Viscount and Lady Berehaven’s tour of Rome in 1842–43’. The Burlington Magazine, 153 (1304):734–737.

• Boggi, Flavio (2011) ‘Lucca in the Middle Ages’. The Burlington Magazine, 153 (1295):132–134.

Bracken, Damian

Book Chapters • Damian Bracken; (2011) ‘’Whence the splendour of such light came to us’: the account of Ireland in Ermenrich’s Life of St Gall’ In: Elizabeth Mullins and Diarmuid Scully (Eds.). ‘Listen, o isles, unto me’: Studies in medieval word and image in honour of Jennifer O’Reilly. Cork: Cork Univer.

Encyclopedia Entries • Damian Bracken; (2011) Oxford guide to the historical reception of Augustine. OUP, Oxford.

Buckley, Sarah-Anne

Books • Sarah-Anne Buckley; (2011) History of the Haematology Association of Ireland, 1977–2010. Dublin: HAI.

Book Chapters • Sarah-Anne Buckley; (2011) “Family and Power: Incest in Ireland, 1880–1950” In: Power in History: from Medieval Ireland to the Post-Modern World, Historical Studies XXVII. Dublin: Irish Academic Press.

• Sarah-Anne Buckley; (2011) “ ‘Found in a dying condition’: Nurse children, in Ireland, 1872–1952” In: Conference Proceedings from the 2010 WHAI Conference. London: Institute of Historical Research.

Connolly, Christopher

Book Reviews Return to President’s Report • Chris Connolly; (2011) Review of ‘Passport to Peking: A Very British Mission to Mao’s China’ by Patrick Wright. London. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxi

Cotter, Paul

Book Chapters • MacCotter, P.; (2011) ‘The Irish rural dean and rural deanery’ In: Medieval Ireland: Clerics, Kings and Vikings. Dublin: Fourcourts Press.

Edited Books • Purcell, E., MacCotter, P., Nyhan, J., Sheehan, J. (Ed.). (2011) Medieval Ireland: Clerics, Kings and Vikings, Dublin: Fourcourts Press.

Cronin, James G R

Other Journals • Cronin, James G. R. (2011) ‘Exhibition review of The Secret Laboratory: Notebooks and Narratives’ ER (Enclave Review), 1 (4).

Blog • Cronin, James G.R. ; (2011) A Day in the Life of the Digital Humanities (Day of DH) Project. Blog.

Book Reviews • Cronin, James G.R. (2011) Review of Elizabeth Bowen’s Irish Writings by Eibhear Walshe, Cork University Press. History Ireland.

• Cronin, James G.R. ; (2011) Review of Alternative and Activist New Media. Digital Media and Society Series. By Leah A. Lievrouw. USA/England, Polity Press, 2011. Scholarly and Research Communication.

Conference Publications • Cronin, James G.R. with Bettie Higgs, Marian McCarthy and Jacinta McKeon; (2011) In-at-the-deep-end: graduate teaching assistants as role models in the university. Engaging Minds: Proceedings of the National Academy’s 5th Annual Conference.

• Daniel Blackshields, James Cronin, Juilanne Nyhan; (2011) Integrative learning and technoculture: what’s at stake? NAIRTL/LIN Conference.

Invited Review Articles • Cronin, James G.R. ; (2011) Excavating the future: taking an ‘archaeological’ approach to technology. Interdisciplinary Science Reviews, 36.1, March, 2011. • Cronin, James G.R. ; (2011) Review of the hidden histories symposium on the history of humanities computing at University College London. http://www.isr-journal.blogspot.com/.

Magazine Article Return to President’s Report • Cronin, James ; (2011) An ‘island of cosmopolitan culture’: Anson’s Voyage round the world and the library at Bowen’s Court, Co. Cork. History Ireland. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxii

Dooley, Brendan

Peer Reviewed Journals • Brendan Dooley; (2011) ‘Review of Antonella Romano, Rome et la science moderne’. Isis, 102 (1):168–170.

Other Journals • Brendan Dooley; (2011) ‘The Dangers of History’ European Review, Academia Europea, 19 (3):433–443.

Edwards, David

Book Chapters • David Edwards; (2011) ‘’Ireland: Security and Conquest” In: Susan Doran & Norman Jones (Eds.). The Elizabethan World. London & New York: Routledge.

Faerber, Beatrix

Book Chapters • Emer Purcell, Paul MacCotter, Julianne Nyhan, John Sheehan; (2011) ‘The Fortunes of CELT’ In: Clerics, Kings and Vikings: essays on Medieval Ireland. Dublin: Four Courts Press.

Geary, Laurence M.

Book Chapters • Geary, Laurence M; (2011) ‘The medical profession, health care and the poor law in nineteenth-century Ireland’ In: Virginia Crossman and Peter Gray (Eds.). Poverty and welfare in Ireland, 1838–1948. Dublin: Irish Academic Press.

Book Reviews • Geary, Laurence M. (2011) James Kelly and Fiona Clark, eds, Ireland and medicine in the seventeenth and eighteenth centuries. Bulletin of the History of Medicine. • Geary, Laurence M. (2011) Ireland and the Irish Antipodes: One World or Worlds Apart. The Australasian Journal of Irish Studies.

Hutchinson, Mark A

Peer Reviewed Journals

Return to • Hutchinson, Mark A. (2011) ‘’Reformed protestantism and the government of Ireland, c. 1565 to 1580: the lord deputyships of Henry Sidney and President’s Report Arthur Grey”. The Sidney journal, 29 (no. 1–2):71–104. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxiii

Klein, Detmar

Book Reviews • Detmar Klein (2011) Modern & Contemporary France, 19 (2011): Review of H. Altink and S. Gemie, ‘At the Border: Margins and Peripheries in Modern France’ (Cardiff, 2008).

Knowles, Simon

Peer Reviewed Journals • Simon Knowles; (2011) ‘Pavement, Gutter, Carriageway: Social Order and Urban Spaces in the Work of W. P. Frith’. Victorian Literature and Culture, 39 (2):349–365.

Krasnodebska –- D’Aughton, Malgorzata

Book Chapters • Krasnodebska-D’Aughton, M.; (2011) ‘Agemmarium for the recognition of precious stones in the Cracow Chapter Library, MS 140: A study on the unity of exegetical themes’ In: Mullins, E. and Scully, D (Eds.). Listen, O Isles, unto me. Studies in medieval word and image in honour of Jennifer O’Reilly [forthcoming]. Cork: Cork University Press. • Krasnodebska-D’Aughton, M.; (2011) ‘Me ﬁeri fecit: Franciscan chalices 1600–1650 [plus a catalogue of exhibition artefacts]’ In: Wallace, P.F. and Ó Floinn, R (Eds.). Franciscan faith: sacred metalwork in Ireland, AD 1600–1750. Dublin: National Museum of Ireland.

Krcma, Edward John

Other Journals • Kr£ma, Ed; (2011) ‘Criticism and Criteria’ Circa. • Kr£ma, Ed; (2011) ‘Excavate (Review)’ Enclave Review, 3 :1–2.

• Kr£ma, Ed; (2011) ‘Real Presences: Broodthaers Today (review)’ Enclave Review, 3 :6–7.

Catalog • Kr£ma, Ed; (2011) ‘Moves, Throws, Plays’ in The Knight Turns its Head and Laughs: Tom Hackney and Lizi Sanchez. London: Catalog.

Kriebel, Sabine Tania

Book Chapters Return to President’s Report • Sabine T. Kriebel; (2011) ‘Chapter 15: Die Pleite, Der Blutige Ernst, Der Gegner, Der Knüppel, Eulenspiegel, AIZ’ In: Peter Brooker, et. al (Eds.). Modernist Magazines: A Critical and Cultural History. Volume 3: Europe 1880–1940. UK: Oxford University Press. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxiv

Book Reviews • Sabine Kriebel; (2011) Filmic Constructions: Shellshocked Men and Nazi New Women. Gender and History. • Sabine Kriebel; (2011) Reviewing VU. History of Photography.

O Drisceoil, Donal

Books • O Drisceoil, Donal and O Drisceoil, Diarmuid; (2011) Fifty Years Have Flown: The History of Cork Airport. Cork: Collins Press.

Book Chapters • O Drisceoil, Donal; (2011) ‘ADark Chapter: Censorship and the Irish Writer’ In: The Oxford History of the Irish Book, Volume 5. Oxford: Oxford University Press. • O Drisceoil, Donal; (2011) ‘Frank O’Connor and Irish Literary Censorship’ In: Censorship across Borders: The Reception of English Literature in Twentieth-Century Europe. Newcastle: Cambridge Scholars Press.

Pamphlet • O Drisceoil, Donal; (2011) Tadhg Barry (1880–1921): The story of an Irish revolutionary. Pamphlet.

O’Driscoll, Mervyn

Peer Reviewed Journals • Mervyn O’Driscoll; (2011) ‘The ‘Unwanted Suitor’: West Germany’s Reception, Response and Role in Ireland’s EEC Entry Request, 1961–63’. Irish Studies in International Affairs, 22:163–186.

O’Halloran, Clare

Peer Reviewed Journals • Clare O’Halloran, Michael Cronin, Colin Graham (co-editors) (2011) No. 43 (Summer 2011). The Irish Review, (43).

Other Journals • Clare O’Halloran (2011) ‘’Better without the Ladies: the Royal Irish Academy and the Admission of Women Members” History Ireland, 19 (6):42–45.

Purcell, Emer

Return to Edited Books President’s Report • Purcell, E., MacCotter, P., Nyhan, J., and Sheehan, J (Ed.). (2011) Clerics, Kings and Vikings: essays on Medieval Ireland, Dublin: Four Courts Press. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxv

Roberts, Geoffrey

Books • Geoffrey Roberts; (2011) Molotov: Stalin’s Cold Warrior. Washington DC: Potomac Books.

Book Chapters • Geoffrey Roberts; (2011) ‘Stalin and the Outbreak of the Second World War’ In: The Origins of the Second World War. London: Continuum Books.

Edited Books • Geoffrey Roberts (Ed.). (2011) The History and Narrative Reader (Persian translation), Tehran: Imam Sadiq University Press.

Peer Reviewed Journals • Geoffrey Roberts; (2011) ‘Moscow’s Cold War on the Periphery: Soviet Policy in Greece, Iran and Turkey, 1943–1948’. Journal of Contemporary History.

Other Journals • Geoffrey Roberts; (2011) ‘Architect of Disaster? Zhukov and 22 June 1941’ SCRSS Information Digest.

Ryan, David

Books • David Ryan; (2011) Contracted: Collective Memory & US Intervention since Vietnam. London and New York: Routledge.

Book Chapters • David Ryan; (2011) “The Dots Above the Detail: The Myopia of Meta-Narrative in George W. Bush’s Declarative War of Ideas’ In: Ali Fisher and Scott Lucas (Eds.). Trials of Engagement: The Future of US Public Diplomacy. Leiden and Boston: Martinus Nijhoff.

School of Irish Learning

Butler, Jennifer

Book Chapters • Butler, Jenny; (2011) ‘Irish Neo-Paganism: Worldview and Identity’ In: Cosgrove, O., Cox, L., Kuhling, C. and Mulholland, P (Eds.). Ireland’s New Religious Movements. Cambridge: Cambridge Scholars Publishing. Return to President’s Report • Butler, Jenny; (2011) ‘Magic and Supernatural Themes in Carnivàle’ In: Aloi, P. and Johnston, H (Eds.). Bloodlust and Dust: Essays on HBO’s Carnivàle. Jefferson, NC: USA: McFarland. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxvi

Other Journals • Butler, Jenny; (2011) ‘AnEthnographic Study of Irish Neo-Pagan Culture’ The Boolean, 2.

Conference Publications • Collection of Papers; (2011) The Ritual Year 4: The Ritual Year and Gender. In: Butler, Jenny (Guest Editor) with Emily Lyle (General Editor) eds. The Ritual Year and Gender Cork.

Carey, John

Books • John Carey, Maire Herbert, James Knowles; (2011) Travelled Tales — Leabhar Scealach Siulach: The Book of Lismore at University College Cork. Cork: Cork University Press.

Peer Reviewed Journals • John Carey (2011) ‘Drie maal negen’. Kelten, 50:11–12. • John Carey (2011) ‘Henry Corbin and the Secret of the Grail’. Temenos Academy Review, 14:159–178.

Book Reviews • John Carey (2011) Language and Truth. • John Carey (2011) The Apocryphal Adam and Eve in Medieval Europe.

Desplanques, Marie-Annick

Peer Reviewed Journals • Desplanques, Marie-Annick ; (2011) ‘’A photograph and a story”. The Archive: Jnl. the Northside Folklore Project, (15).

Miles, Brent

Books • Brent Miles; (2011) Heroic Saga and Classical Epic in Medieval Ireland. Woodbridge: Boydell & Brewer.

Murray, Kevin

Books • Donna Thornton and Kevin Murray (2011) Bibliography of Publications on Irish Placenames. London: Irish Texts Society. Return to President’s Report • Pádraig Ó Riain, Diarmuid Ó Murchadha and Kevin Murray (2011) Historical Dictionary of Gaelic Placenames / Foclóir Stairiúil Áitainmneacha na Gaeilge, Fascicle 4 / Fascúl 4 [Ceall Ghabhann-Cláiríne]. London: Irish Texts Society. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxvii

Edited Books • Kevin Murray and Pádraig Ó Riain (Ed.). (2011) Edmund Hogan’s Onomasticon Goedelicum: Reconsiderations, London: Irish Texts Society.

Nic Cárthaigh, Emma

Book Chapters • Nic Cárthaigh, E.; (2011) ‘Updating the Onomasticon: challenges’ In: Kevin Murray and Pádraig Ó Riain (Eds.). Edmund Hogan’s Onomasticon Goedelicum: Reconsiderations. Dublin: Irish Texts Society.

O Duinnshleibhe, Sean

Books • Ó Duinnshléibhe, Seán; (2011) Párliment na bhFíodóirí. Galway, Ireland: Cló Iar-Chonnacht.

Book Chapters • Seán Ó Duinnshléibhe; (2011) ‘’Pilf’ring from the First Creation’: Dáibhí de Barra’s Parliament of Weavers’ In: Juliana Adelman and Eadaoin Agnew (Eds.). Science and Technology in Nineteenth-century Ireland: Innovations, Individuals and Institutions. Dublin: Four Courts Press.

O’Carroll, Clíona

Book Chapters • O’Carroll Clíona; (2011) ‘Éist le ceol na habhann: ceird na heitneagrafaíochta an lae inniu. (The craft of ethnography today.)’ In: Féilscríbhinn Ghearóid Uí Chrualaoich. Cork: Cork University Press. • O’Carroll, Clíona; (2011) ‘’They are in the sea as well as on the land’: Lore and luck of the West Coast’ In: Fishing Folk: Boats, Boatmen and Beliefs. Galway: Galway City Council.

Riggs, Padraigin

Book Chapters • Pádraigín Riggs (2011) ‘Teangacha Uí Mhuirthile’ In: Tadhg Ó Dúshlaine (Eds.). Filí Innti go hIontach — Léachtaí Cholm Cille XLI. Maigh Nuad: An Sagart.

Titley, Alan

Books Return to • alan titley; (2011) Na Drámaí Garbha. Indreabhán: Cló Iar-Chonnachta. President’s Report • alan titley; (2011) Nailing Theses: selected essays. Belfast: Lagan Press. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxviii

Book Chapters • Bernadette Sweeney and Marie Kelly; (2011) ‘Tom McIntyr’es Caoineadh Airt Uí Laoghaire’ In: The Theatre of Tom McIntyre: Strays from the ether. Dublin: Carysfort Press.

Peer Reviewed Journals • Michel Byrne; (2011) ‘The History of Gaelic Games before the GAA’.Aiste, 3 (3).

Ó Cadhla, Stiofán

Books • Stiofan O Cadhla; (2011) An tSlat Feithleoige: Eolas agus Ealain an Duchais. Indreabhan: Clo Iar-Chonnachta.

Edited Books • Stiofan O Cadhla, Diarmaid O Giollain (Ed.). (2011) Leann an Duchais: Aisti in Omos do Ghearoid O Crualaoich, Corcaigh / Cork: Cork University Press / Clo Ollscoile Chorcai.

Peer Reviewed Journals • Stiofan O Cadhla; (2011) ‘Ag Tiontu an Chultuir: Affaire Dominici agus Maolra Seoighe’. Etudes irlandaises. School of Languages, Literatures, and Culture

Boyd, Stephen

Books • Stephen Boyd; Manfred Schewe; (2011) Welttheater: übersetzen, adaptieren, inszenieren — World Theatre: translation, adaptation, production. Berlin: Schibri Verlag.

Buffery, Helena

Books • Buffery, H., Marcer, E.; (2011) Historical Dictionary of the Catalans. Lanham, MD: Scarecrow Press.

Book Chapters • Buffery, H., Lonsdale, L.; (2011) ‘Invisible Catalan(e)s: Catalan Women Writers and the Contested Space of Home’ In: De Ros, X., Hazbun, G (Eds.). A Companion to Spanish Women’s Studies. London: Boydell & Brewer. Return to President’s Report • Buffery, H.; (2011) ‘Efﬁgies of Return in Spanish Republican Exile Theatre and Performance Cultures’ In: Buffery, H (Eds.). Stages of Exile. Bern: Peter Lang. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xxxix

Edited Books • Buffery, H (Ed.). (2011) Stages of Exile, Bern: Peter Lang.

Book Reviews • Buffery, H (2011) Shakespeare in the Spanish Theatre: 1772 to the Present. • Buffery, H. (2011) Sergi Belbel and Catalan Theatre. Text Performance and Identity.

Conference Publications • Buffery, H; (2011) En un lugar llamado Mexico: compromiso local y recepcion transnacional en la obra de Maruxa Vilalta. In: Aznar Soler, M eds. El exilio de segunda generación Bellaterra, Universitat Autonoma de Barcelona.

Chu, Mark

Book Chapters • Chu, Mark; (2011) ‘Crime and the South’ In: Giuliana Pieri (Eds.). Italian Crime Fiction. Cardiff: U of Wales.

• Chu, Mark; (2011) ‘Dei cavalieri, della morte e del diavolo: Sciascia e gli scrittori svizzeri’ In: Renato Martinoni (Eds.). ´Troppo poco pazziˇ. Leonardo Sciascia nella libera e laica Svizzera. Firenze: Leo S. Olschki.

• Chu, Mark; (2011) ‘Impegno da vendere: società e politica nella serie del commissario Montalbano di Andrea Camilleri’ In: Roberto Bertoni (Eds.). Specchi di realtà: narrativa e società. Dublin-Torino: TCD-Trauben.

Peer Reviewed Journals • Chu, Mark (2011) ‘’L’etica del potere: Sciascia e i suoi eredi giallisti”. Todomodo. Rivista internazionale di studi sciasciani / A Journal of Sciascia Studies, I:43–54.

• Chu, Mark (2011) ‘Postilla a Joseph Farrell, ‘Sicilies: Tomasi di Lampedusa and Leonardo Sciascia”. Todomodo. Rivista internazionale di studi sciasciani / A Journal of Sciascia Studies, I:301–302. • Chu, Mark (2011) ‘Postilla a La Place de la religion et le sens du religieux dans la litterature italienne contemporaine (1970–2006)’. Todomodo. Rivista internazionale di studi sciasciani / A Journal of Sciascia Studies, I:300–301. • Chu, Mark (2011) ‘Postilla a Leonardo Sciascia, Il fuoco nel mare’. Todomodo. Rivista internazionale di studi sciasciani / A Journal of Sciascia Studies, I:299–299. • Chu, Mark (2011) ‘Postilla a Luciano Curreri, ‘Per le zolfare che ovunque ﬁorivano. Scavi zolﬁferi nell’opera sciasciana (1952–1964)”. Todomodo. Rivista internazionale di studi sciasciani / A Journal of Sciascia Studies, I:301–301. Return to President’s Report • Chu, Mark and Albiero, Renato (2011) ‘Introduzione. L’etica del potere per Leonardo Sciascia’. Todomodo. Rivista internazionale di studi sciasciani / A Journal of Sciascia Studies, I:5–9. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xl

Conrad, Maren

Book Chapters • Lembke, Gerrit (2011) ‘Von toten Autoren und lebenden Büchern. Entwürfe zu poststrukturalistischen Autorenkonzeptionen in Walter Moers’ Die Stadt der träumenden Bücher’ In: Walter Moers’ Zamonien-Romane. Vermessung eines ﬁktionalen Kontinents. Goettingen: Vandenhoeck & Ruprecht. • Lembke, Gerrit (2011) ‘ˇBlut! Blut! Blut!´ — Die Artusepik als heroisches Erbgut wortkarger Wolpertinger’ In: Walter Moers’ Zamonien-Romane. Vermessung eines ﬁktionalen Kontinents. Goettingen: Vandenhoeck & Ruprecht. • Van Bebber, Jörg (2011) ‘Spiel im Spiel — Die Krise des Ego-Shooters’ In: Dawn of an Evil Millennium. Horror/Kultur im neuen Jahrtausend. Darmstadt: Büchner-Verlag.

Peer Reviewed Journals • Breuer,Ulrich /Wegmann, Nikolaus (2011) ‘Romantische Kunsttheorie im antiken Gewand. August Wilhelm Schlegels Pygmalion’. Athenaeum, — Jahrbuch der Friedrich Schlegel-Gesellschaft (20):45–66.

Crowley, Patrick

Book Chapters • Patrick Crowley (2011) ‘Algerian Letters: Mixture, Genres, Literature Itself’ In: Patrick Crowley and Jane Hiddleston (Eds.). Postcolonial Poetics: Genre and Form. Liverpool: Liverpool University Press. • Patrick Crowley (2011) ‘Eugene Fromentin: Travel, Algeria, and the Pursuit of Aesthetic Form’ In: Patrick Crowley, Noreen Humble and Silvia Ross (Eds.). Mediterranean Travels. Liverpool: Liverpool University Press.

Edited Books • Patrick Crowley and Jane Hiddleston (Ed.). (2011) Postcolonial Poetics: Genre and Form, Liverpool: Liverpool University Press. • Patrick Crowley, Noreen Humble and Silvia Ross (Ed.). (2011) Mediterranean Travels: Writing Self and Other from Ancient World to Contemporary Society, Oxford: Legenda.

Fest, Kerstin

Peer Reviewed Journals • Kerstin Fest (2011) ‘Das neue Weib bringt auch die neue Künstlerin hervor: Femininity and Art in Christa Winsloe’s A Life Begins’. Germanistik in Ireland, (6):137–151.

Return to Other Journals President’s Report • Kerstin Fest (2011) ‘Alma López: Our Lady and Other Queer Santas’ Enclave, (4). UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xli

Finnegan, Nuala

Book Chapters • Finnegan, Nuala; (2011) “La voz chica’: Re-imagining the Family in Gustavo Loza’s Al otro lado (2005)” In: New Mexican Cinema. I.B. Tauris: I.B. Tauris. • N.F; (2011) “Otro modo de ser: Rosario Castellanos” In: Companion to Latin American Women Writers. London: Tamesis: London: Tamesis.

Hofmann, Gert

Book Chapters • Gert Hofmann, Marko Pajevic, Michael Shields; Rachel MagShamhráin (2011) ‘Introduction’ In: German and European Poetics after the Holocaust. Crisis and Creativity. Rochester, NY: Camden House. • Hofmann, Gert (2011) ‘Im dritten Raum der Literatur. Der Weltensammler in Indien’ In: Manfred Durzak (Eds.). Bilder Indiens in der deutschen Literatur. Frankfurt a. M: Peter Lang. • Hofmann, Gert; (2011) ‘Claude Lanzmann’s Shoah and the Aesthetics of Ohnmacht’ In: Gert Hofmann, Rachel MagShamhrain, Marko Pajevic, Michael Shields (Eds.). German and European Poetics after the Holocaust. Crisis and Creativity. Rochester, NY: Camden House. • Hofmann, Gert; (2011) ‘Denn es giebt keine Wahrheit... Nietzsche’s Rehabilitation of Fiction in Philosophy’ In: Panja, Sh.; etc (Eds.). Shakespeare and the Art of Lying. New Delhi: Orient BlackSwan.

Edited Books • Gert Hofmann, Rachel MagShamhráin, Marko Pajevic, Michael Shields (Ed.). (2011) German and European Poetics after the Holocaust: Crisis and Creativity, Rochester NY: Camden House.

Conference Publications • Hofmann, Gert; (2011) Exzentrische Signaturen. Hölderlins späte Lyrik. In: Hans-Walter Schmidt-Hannisa eds. Signaturen.

Howard, Martin

Book Chapters • Howard, M (2011) ‘Lessons from the world of SLA on the impact of learning context in L2 acquisition. Insights from Study Abroad research’ In: P Trevisiol-Okamura & G Komur-Thilloy (Eds.). Discours, acquisition et didactique des langues. Les termes d’un dialogue. Paris: Orizons. • Howard, M (2011) ‘The ‘small nations, big neighbours’ phenomenon from the point of view of language issues: The case of French in Quebec and Canada’ In: Conrich, I, D Alessio & I Sachdev (Eds.). Small Nations, Big neighbours: New Zealand and Canada. Nottingham: Kakapo Books.

Return to • Howard, M (2011) ‘Variation, varietes et formes variables du francais dans les lectes d’apprenants: perspectives europeennes sur l’acquisition de la President’s Report variation sociolinguistique en francais langue etrangere’ In: O Bertrand & I Schaffner (Eds.). Variations, varietes et formes du francais. Paris: Presses de l’Ecole Polytechnique. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xlii

Edited Books • Howard, M; M O’Laoire; D Singleton (Ed.). (2011) Input and Learning Context in Second Language Acquisition. Special issue of International Review of Applied Linguistics 49,2, Berlin / New York: Mouton deGruyter.

Peer Reviewed Journals • Howard, M (2011) ‘Input perspectives on the role of learning context in second language acquisition’. International Review of Applied Linguistics, 49 (2):71–82.

• Howard, M (2011) ‘Review of Janet Muller, Language and Conﬂict in Northern Ireland. A Silent War’. Language Policy.

Magshamhráin, Rachel

Book Chapters • Rachel MagShamhráin; (2011) ‘The Two Faces of a National Hero: Ulrich von Hutten’s Arminius and Heinrich von Kleist’s Herrmann’ In: Christina Lee and Nicola McLelland (Eds.). Germania Remembered 1500–2009. Tuscon, Arizona: Arizona Centre for Medieval and Renaissance Studies.

Edited Books • Gert Hofmann, Rachel MagShamhráin, Marko Pajevic, Michael Shields (Ed.). (2011) German and European Poetics after the Holocaust: Crisis and Creativity, Rochester NY: Camden House.

• Rachel MagShamhráin and Sabine Strümper-Krobb (Ed.). (2011) After Postmodernism, Konstanz: Hartung-Gorre.

Review Articles • MagShamhrain, R; (2011) Julia S. Torrie, ‘For Their Own Good’: Civilian Evacuations in Germany and France, 1939–1945. Journal of Contemporary European Studies 19.1 (2011).

Translations • MagShamhráin R; (2011) Claudia Schmölders, Charismatic Expressions: The Faces of George, Hindenburg, and Hitler. Translations. • MagShamhráin R; (2011) Friedrich Balke, The Image of Lucretia: On the Creation of Republican Charisma in Livy. Translations.

• MagShamhráin R; (2011) Niels Werber, Ahab’s Charisma: Captains, Kings, and Prophets. Translations.

Neville, Grace

Edited Books

Return to • Grace Neville, Yann Bevant and Anne Goarzin (Ed.). (2011) Ireland, France, Rebellion, Rennes: CRBP / Centre de Recherche Bretonne et Celtique President’s Report de l’Universite de Rennes 2. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xliii

Noonan, Mary P.

Book Chapters • Mary Noonan (2011) ‘Les Femmes de théâtre en Irlande’ In: Béatrice Didier (Eds.). Le Dictionnaire des Créatrices. Paris: des femmes.

Peer Reviewed Journals • Mary Noonan (2011) ‘Desire in Language: Nathalie Sarraute’s Theatre of Interpellation’. The Irish Journal of French Studies, 2011 (11):28–37.

Book Reviews • Mary Noonan (2011) Review of An Intercultural Meeting Through Applied Theatre, by Joelle Aden (Berlin: Schibri-Verlag, 2010). Cor.

O’Connell, Daragh

Book Chapters • O’Connell, Daragh; (2011) ‘Nostoi: Contesting Identities and Homelands in the Narrative of Carmine Abate’ In: Roberto Bertoni (Eds.). Specchi di realta’: Aspetti del rapporto tra narrativa e societa’ in Italia dopo il 1989. Turin: Trauben.

O’Donovan, Patrick

Book Chapters • O’Donovan, Patrick; (2011) ‘Proust’s ‘grands chagrins utiles’: beyond contingency?’ In: Harkness, Nigel and Marion Schmid (Eds.). Au seuil de la modernité: Proust, Literature and the Arts. Oxford: Peter Lang. • O’Donovan, Patrick; (2011) ‘The time of Vigny’ In: Segal, Naomi and Gill Rye (Eds.). ‘When familiar meanings dissolve’: Essays in French Studies in Memory of Malcolm Bowie. Oxford: Peter Lang.

Peer Reviewed Journals • O’Donovan, Patrick (2011) ‘What is freedom for? or, the fate of Constant’. Irish Journal of French Studies, 11.

O’Reilly, Claire

Book Chapters • O’Reilly, Claire; (2011) ‘German-Irish Economic Ties and their Interdependence with the Cultural Sphere’ In: Joachim Fischer and Ralf Stehle (Eds.). Contemporary German-Irish cultural relations in a European Perspective: Exploring issues in cultural policy and practice. Trier: Wissenschaftlicher Verlag Trier.

Return to Published Reports President’s Report • O’Reilly, Claire; (2011) Business German in Ireland Symposium — March 11, 2011. Hartung-Gorre Verlag Konstanz. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xliv

Rascaroli, Laura

Book Chapters • Rascaroli, Laura, Rhodes, John David ; (2011) ‘Interstitial, Pretentious, Alienated, Dead: Antonioni at 100’ In: Rascaroli, Laura and Rhodes, John David (Eds.). Antonioni: Centenary Essays. London: BFI/Palgrave. • Rascaroli, Laura; (2011) ‘Modernity, Put into Form: ‘Blow-Up’,Objectuality, 1960s Antonioni’ In: Rascaroli, Laura, Rhodes, John David (Eds.). Antonioni: Centenary Essays. London: BFI/Palgrave.

Edited Books • Rascaroli, Laura, John David Rhodes (Ed.). (2011) Antonioni: Centenary Essays, London: British Film Institute/Palgrave McMillan.

Peer Reviewed Journals • Rascaroli, Laura; (2011) ‘Back to the Future: The European Film Studies Agenda Today’. Alphaville: Journal of Film and Screen Media, 1 (1):1–4. • Rascaroli, Laura; (2011) ‘Burning Passions, Flammable Decade: Cinema, Avant-Garde, Self and Society in ‘The Fire in the Water’ (1977)’. Framework: The Journal of Cinema and Media, 15 (1+2).

• Rascaroli, Laura; (2011) ‘Sonic interstices: essayistic voiceover and spectatorial space in Robert Cambrinus’s ‘Commentary’ (2009)’. Media Fields Journal, 1 (3).

Book Reviews • Rascaroli, Laura; (2011) Review of Dimitris Eleftheriotis, Cinematic Journeys: Film and Movement. Edinburgh: Edinburg University Press, 2010.

Ross, Silvia

Book Chapters • Ross, Silvia; (2011) ‘’Eating Italian: Consuming the Other’s Culture in Travel Writing by Frances Mayes and Gary Paul Nabhan” In: Patrick Crowley, Noreen Humble and Silvia Ross (Eds.). Changing Conceptions of the Other: Travel Writing in the Mediterranean from the Ancient World to Contemporary Society. Oxford: Legenda.

• Ross, Silvia; (2011) ‘’Promoting Understanding of Petrarch’s Canzoniere through Popular Music” In: Approaches to Teaching Petrarch’s Canzoniere and Petrarchism. NY: MLA Book Publications.

Edited Books • Patrick Crowley, Noreen Humble, Silvia Ross (Ed.). (2011) Mediterranean Travels: Writing Self and Other from the Ancient World to Contemporary Society, Oxford: Legenda. Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xlv

Ryan, Angela

Books • Ryan, Angela (ed), Sand, George.; (2011) Un hiver a Majorque de George Sand. Edition critique par Angela Ryan. Paris: Editions Honore Champion.

Schewe, Manfred

Books • Stephen Boyd; Manfred Schewe; (2011) Welttheater: übersetzen, adaptieren, inszenieren — World Theatre: translation, adaptation, production. Berlin: Schibri Verlag.

Book Chapters • Manfred Schewe; (2011) ‘Cork’s World Theatre: Ein Beispiel performativer Auslandsgermanistik’ In: Deutsch als Fremdsprache — Internationale Perspektiven. tbc: tbc. • Manfred Schewe; (2011) ‘Die Welt auch im fremdsprachlichen Unterricht immer wieder neu verzaubern: Plädoyer für eine performative Lehr- und Lernkultur!’ In: Almut Küppers; Torben Schmidt; Maik Walter (Eds.). Inszenierungen im Fremdsprachenunterricht: Grundlagen, Formen, Perspektiven. Hannover: Schroedel. • Manfred Schewe; (2011) ‘Skizze einer performativen Auslandsgermanistik’ In: tbc. Madrid: FAGE.

• Manfred Schewe; (2011) ‘Weiter auf dem Wege zu einer performativen Fremd- und Zweitsprachendidaktik’ In: Hans-Jürgen Krumm / Paul Portmann-Tselikas (Eds.). Theorie und Praxis. Österreichische Beiträge zu Deutsch als Fremdsprache. Graz: Studienverlag.

Peer Reviewed Journals • Manfred Schewe; (2011) ‘Rezension: Peter Lutzker (2007), The Art of Foreign Language Teaching.: Improvisation and Drama in Teacher Development and Language Learning. Tübingen, Francke Verlag’. SCENARIO — Drama and Theatre in Language Education, V (1).

• Manfred Schewe; (2011) ‘Vorwort (Issue 1)’. SCENARIO — Drama and Theatre in Language Education, V (1).

Other Journals • Manfred Schewe; (2011) ‘Learning with Head, Heart, Hands and Feet’ Art Kitli, 2 (March 2011):40–41.

Conference Publications • Manfred Schewe; (2011) Die Zukunft der irischen Germanistik, oder: Trotz allem hartnäckig zuversichtlich — Plädoyer für eine stärkere Öffnung hin zu den (performativen) Künsten. In: Joachim Fischer and Rolf Stehle (eds) eds. Contemporary German-Irish cultural relations in a European perspective: Exploring issues in cultural policy and practice Wissenschaftlicher Verlag Trier. Return to President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xlvi

Veiga, Martín

Book Chapters • Veiga, Martín; (2011) ‘Deciphering the Past, Interpreting the Present: Self and Identity in Mediterráneos by Rafael Chirbes’ In: Patrick Crowley, Noreen Humble and Silvia Ross (Eds.). Mediterranean Travels: Writing Self and Other from the Ancient World to Contemporary Society. Oxford: Legenda.

• Veiga, Martín; (2011) ‘Travelling South: Representations of Iberia in the Poetry of Pearse Hutchinson’ In: Philip Coleman and Maria Johnston (Eds.). Reading Pearse Hutchinson: ‘From Findrum to Fisterra’. Dublin: Irish Academic Press.

Peer Reviewed Journals • Veiga, Martín (2011) ‘Avilés de Taramancos e a tradución poética’. Boletín Galego de Literatura, (45):279–290.

Walsh, Anne

Books • Anne L Walsh; (2011) Chaos and Coincidence in Contemporary Spanish Fiction. Bern: Peter Lang.

School of Music and Theatre

Cremin, Derek

Books • Cremin D; (2011) Encyclopaedia of Music in Ireland. Ireland: UCD Press.

Finnerty, Michelle

Books • Finnerty, Michelle and Kearney, Daithí; (2011) Cheolchéim: Introduction to Irish traditional music, song and dance for the early years. Cork: Arts Council of Ireland.

Conference Publications • Finnerty, Michelle; (2011) Children’s Access to Music Education in Ireland: Exploring provisions in formal and informal education and community contexts. MERYC 2011: European Music Educators and Researchers for Young Children.

• Michelle Finnerty; (2011) Connecting Classroom, School and Community: Exploring Music Education in Ireland (Forthcoming). In: Dr John O Return to Flynn eds. Sociological Explorations: Proceedings of the 6th International Symposium on the Sociology of Music Education. President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xlvii

Newsletter • Finnerty, Michelle; (2011) Meet the Professor: Education Resource to Celebrate the Centenary of the Birth of Aloys Fleischmann. Post Primary Music Teacher’s Association of Ireland: Newsletter.

Hill, Juniper Lynn

Book Chapters • Hill, J.; (2011) ‘Poikkikulttuurisen vaihdon historiaa: suomalainen ja ruotsalainen rallatus’ In: Huttu-Hiltunen, Pekka, Janne Seppänen, Eila Stepanova, Frog, and Riikka Nevalainen (Eds.). Laulu kulttuurisena kommunikaationa. Kuhmo, Finland: Juminkeko.

Other Journals • Hill, J. (2011) ‘Ulkomaalaisen kokemuksia matkalta Suomalaiseen Kansanmusiikkiin’ Musiikin Suunta.

Kulezic-Wilson, Danijela

Peer Reviewed Journals • Kulezic-Wilson, D.; (2011) ‘Soundscapes of Trauma and the Silence of Revenge in Peter Strickland’s ‘Katalin Varga”. The New Soundtrack, 1 (1):57–71.

Marshall, Melanie L

Peer Reviewed Journals • Brooks, Jeanice and Melanie L. Marshall; (2011) ‘Editorial’. Early Music, 39 (2):155–155. • Marshall, Melanie L. ; (2011) ‘Warriors and Musicians: Notes from the Colonna Family Archive’. Early Music, 39 (2):195–201.

Conference Paper • Marshall, Melanie L. (2011) The Sound of Whiteness: Early Music Vocal Performance Practice in Britain. American Musicological Society annual meeting, San Francisco, 10 Nov. 2011.

• Marshall, Melanie L.; (2011) Florentine Gypsy Fictions. Renaissance Society of America annual meeting, Montreal, 24–26 March 2011.

Mercier, Mel

Music score • Mel Mercier (2011) Cuil Aodha to Java. Return to President’s Report • Mel Mercier (2011) Sétanta. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xlviii

• Mel Mercier (2011) The Winter’s Tale. • Mercier, M.; (2011) East Pier.

• Mercier, M.; (2011) The Passing. • Mercier, M.; (2011) The School for Scandal.

Performances • Mercier, M (2011) Cork Folk Festival Recital. Performances.

• Mercier, M. (2011) Ceoltoirí Chualann. Performances. • Mercier, M. (2011) Comoradh. Performances.

• Mercier, M. (2011) Junctions. Performances. • Mercier, M. (2011) Shipwrecked. Performances.

• Mercier, M. (2011) TRASNA. Performances. • Mercier, M. (2011) Telephones and Gongs. Performances. • Mercier, M; McCarthy, D and O’Shea, M. (2011) Strange Attractor. Performances.

Thesis/Dissertation • Mercier, M. (2011) The Mescher Bones Playing Tradition: Syncopations on the American Landscape. Thesis/Dissertation.

Morris, Christopher

Book Chapters • Morris, C.; (2011) ‘Too Much Music: The Media of Opera’ In: Nicholas Till (Eds.). The Cambridge Companion to Opera Studies. London: Cambridge University Press.

Peer Reviewed Journals • Morris, C.; (2011) ‘Wagnervideo’. The Opera Quarterly, 27 (2–3):1–21.

Weeter, Jeffrey

Return to Compositions President’s Report • Simko, K., Weeter, J.; (2011) Lustre. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences xlix

DVD • Weeter, J. McCarthy, D. (2011) Untitled Audio Visual Work. DVD.

Performances • Weeter, J. Simko, K. (2011) Lustre European Tour.

School of Sociology and Philosophy

Bufacchi, Vittorio

Edited Books • Bufacchi, V (Ed.). (2011) Rethinking Violence, London: Routledge.

Connolly, Linda

Books • Connolly, Linda; (2011) Theorising Irish Studies. Manchester: Manchester University Press.

Hourigan, Niamh M

Book Chapters • Niamh Hourigan, Frances Minahan, Máire Treasa NicEochagháin; (2011) ‘Community Spirit and Neighbourliness in Moyross and Southill’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press.

• Niamh Hourigan; (2011) ‘AHistory of Social Exclusion in Limerick’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press. • Niamh Hourigan; (2011) ‘ASociology of Feuding: Gangland and Traveller Feuds Compared’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press. • Niamh Hourigan; (2011) ‘Divided Communities: Mapping Social Exclusion in Limerick’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press.

• Niamh Hourigan; (2011) ‘Introduction’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press. • Niamh Hourigan; (2011) ‘Lessons from Limerick: Policing, Regeneration, Child Protection’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press. Return to President’s Report • Niamh Hourigan; (2011) ‘Living with Fear and Feuding in Limerick — Introduction’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences l

• Niamh Hourigan; (2011) ‘Organized Crime and Community Violence: Limerick’s Regimes of Fear’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press. • Niamh Hourigan; (2011) ‘Understanding Limerick? Conclusions’ In: Understanding Limerick: Social Exclusion and Change. Cork: Cork University Press.

Edited Books • Niamh Hourigan (Ed.). (2011) Understanding Limerick: Social Exclusion and Change, Cork: Cork University Press.

Peer Reviewed Journals • Niamh Hourigan; (2011) ‘Review Suburban Afﬁliations’. Contemporary Sociology, 40 (3).

Conference Publications • Niamh Hourigan ; (2011) Irish Language Movement and Immigrant Language Rights. In: Luke Gibbons eds. Race and Immigration in the New Ireland University of Notre Dame, Indiana, USA.

Jansen, Julia

Book Chapters • Julia Jansen; (2011) ‘Kant and Husserl: Representations, Realism and the Transcendental Stance’ In: Husserl und die Klassische Deutsche Philosophie. Goettingen: Vandenhoeck & Ruprecht.

Edited Books • Halsall, F.; Jansen, J; Murphy, S (Ed.). (2011) Critical Communities and Aesthetic Practices, Dordrecht: Springer.

Keohane, Kieran

Books • Kavanagh, D., Keohane, K., Kuhling, C.; (2011) Organization in Play. Witney, UK: Peter Lang. • O’Mahony, P. & Keohane, K. (eds); (2011) Irish Enviornmental Politics after the Communicative Turn. Manchester: Manchester UP.

Book Chapters • Kieran Keohane Carmen Kuhling (2011) ‘Sustainability and community: the un-sustainability of the social model of neo-liberal globalization and the speechlessness of the community at the periphery’ In: Liam Leonard & Iosif Botetzagias (Eds.). Sustainable Politics and the Crisis of the Peripheries: Ireland and Greece. Bingley, UK: Emerald Group.

Return to Peer Reviewed Journals President’s Report • Kieran Keohane (2011) ‘On the Political in the Wake: Carl Schmitt’s and James Joyce’s Political Theologies’. Cultural Politics, 7 (2):249–264. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences li

Mccullagh, Ciaran

Book Chapters • McCullagh, Ciaran; (2011) ‘Getting a Fix on Crime in Limerick’ In: Understanding Limerick. Cork: Cork University Press.

Moeller, Hans-Georg

Books • Hans-Georg Moeller; (2011) Radical Luhmann. New York: Columbia University Press.

Book Chapters • Hans-Georg Moeller; (2011) ‘Daoism as Academic Philosophy: Feng Youlan’s New Metaphysics (Xin Lixue)’ In: John Makeham (Eds.). The Development of Academic Disciplines in Twentieth Century China. Hong Kong: Chinese University Press. • Hans-Georg Moeller; (2011) ‘Moral und Moralkritik in Griechenland und China’ In: Jochen Althoff, Georg Woehrle (Eds.). Form und Gehalt in Texten der griechischen und chinesischen Philosophie. Stuttgart: Steiner. • Hans-Georg Moeller; (2011) ‘Who is Afraid of Arnold Schwarzenegger? Absurd Democracy in the United States’ In: Hannes Bergthaller, Carsten Schinko (Eds.). Adressing Modernity: Social Systems Theory and U.S. Cultures. Amsterdam: Rodopi.

Edited Books • Hans-Georg Moeller, Jason Dockstader, Guenter Wohlfart (Ed.). (2011) Identity in Eastern and Western Philosophies, Nordhausen: Beltz.

Peer Reviewed Journals • Hans-Georg Moeller; (2011) ‘Notwendigkeit und Erinnerung in Hegels Phänomenologie des Geistes’. minima sinica.

Dictionary Entries • Hans-Georg Moeller; (2011) Daoism. Oxford.

Moore, Alfred

Book Chapters • Moore, A.; (2011) ‘Talking about Ethics: Public Bioethics and the Regulation of Biotechnology in the UK’ In: Hub Zwart and Floris Tomasini (eds) (Eds.). Genomics, Ethics and Governance. Cambridge: Cambridge Scholars Press.

Nine, Cara

Return to Other Journals President’s Report • Nine, Cara; (2011) ‘Ecological Refugee States: Do they have a right to a new territory?’ Res Publica (Australia). UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences lii

Review Articles • Cara Nine; (2011) Harry Brighouse, Ingrid Robeyns (eds.) Measuring Justice: Primary Goods and Capabilities. Notre Dame Philosophica.

O’Brien, Lilian

Book Chapters • Lilian O’Brien; (2011) ‘Self-Evaluation in Intention: Individual and Shared’ In: Anita Konzelmann Ziv, Keith Lehrer, Hans-Bernhard Schmid (Eds.). Self-Evaluation: Affective and Social Grounds of Intentionality. Germany: Springer Verlag: Philosophical Studies Series.

Published Reports • Lilian O’Brien; (2011) Review of E.J. Lowe’s Personal Agency.

O’Mahony, Patrick

Books • O’Mahony, P. & Keohane, K. (eds); (2011) Irish Enviornmental Politics after the Communicative Turn. Manchester: Manchester UP.

Book Chapters • O’Mahony, P. ; (2011) ‘Irish Environmental Discourse: Towards an Ecological Morality?’ In: Irish Environmental Politics after the Communicative Turn, Manchester: Manchester University Press. Manchester: Manchester University Press. • O’Mahony, P. ; (2011) ‘Social Positions and Dynamics within the Cognitive Order of Irish Environmental Discourse” In: Irish Environmental Politics after the Communicative Turn. Manchester: Manchester University Press.

Peer Reviewed Journals • O’Mahony, P. ; (2011) ‘Social Theory and the Critique of Capitalism in a Communication Society in Irish Journal of Sociology’.

Power, Sean Enda

Peer Reviewed Journals • Sean Enda Power; (2011) ‘The Metaphysics of the ‘Specious’ Present’. Erkenntnis.

Ruane, Joseph

Peer Reviewed Journals Return to • J. Ruane; (2011) ‘Ethnicite, religion et religiosite: Les protestants dans la republique irlandaise’. Ethnologie francaise, XLl (2):271–278. President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences liii

Skillington, Tracey

Other Journals • Skillington, Tracey (2011) ‘Memories of Clerical Abuse and Human Rights (Invited Contribution)’ Human Rights in Ireland.

Strydom, B.P.

Books • Strydom, P.; (2011) Contemporary Critical Theory and Methodology. London: Routledge.

Book Chapters • Strydom, P.; (2011) ‘Modernity and Cosmopolitanism: From a Critical Social Theory Perspective’ In: G. Delanty (Eds.). Handbook of Cosmopolitan Studies. London: Routledge. • Strydom, P.; (2011) ‘The Cognitive and Metacognitive Dimensions of Social and Political Theory’ In: G. Delanty and S. Turner (Eds.). Handbook of Social and Political Theory. London: Routledge.

• Strydom, P.; (2011) ‘The Communicative Turn and Cosmopolitan Ecological Consciousness in the Global Risk Society: An Assessment of the Discourse’ In: P. O’Mahony and K. Keohane (Eds.). Irish Environmental Politics: The Communicative Turn. Manchester: Manchester University Press.

Peer Reviewed Journals • Strydom, P. ed.; (2011) ‘’Key Issues in Contemporary Social Theory”. Irish Journal of Sociology, 19 (1).

• Strydom, P. ed.; (2011) ‘Editor’s Introduction: The Challenges Facing Contemporary Social Theory’. Irish Journal of Sociology, 19 (1). • Strydom, P.; (2011) ‘Cognition and Recognition: On the Problem of the Cognitive in Honneth’. Philosophy and Social Criticism. • Strydom, P.; (2011) ‘Towards a Cognitive Sociology for Our Time: Habermas and Honneth or Language and Recognition — and Beyond’. Irish Journal of Sociology, 19 (1).

Szakolczai, Arpad

Book Chapters • Arpad Szakolczai; (2011) ‘Voegelin, Weber, and Neo-Kantianism’ In: Lee Trepanier and Steven McGuire (Eds.). Eric Voegelin and the Continental Tradition: Explorations in Modern Political Thought. USA: University of Missouri Press.

• Szakolczai, Arpad; (2011) ‘Modernità multiple, età assiale e liminalità permanente: approcci alla modernità alla ricerca di un paradigma’ In: Return to Consuelo Corradi (Eds.). Modernità multiple — forthcoming. Soveria Mannelli (CZ), italy: Rubbettino. President’s Report UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences liv

Peer Reviewed Journals • Arpad Szakolczai (2011) ‘Franz Borkenau on World Image’. Humana.Mente, 18:105–122. • Arpad Szakolczai; (2011) ‘Civilizing processes and accelerating spirals: The dynamics of social processes, after Elias’. Cambio: Rivista sulle trasformazioni sociali, 1 (2).

Other Journals • Arpad Szakolczai; (2011) ‘Areview of David Wengrow, ‘What Makes Civilization? The Ancient Near East and the Future of the West” Journal of the Royal Anthropological Institute, 17.

Conference Publications • Szakolczai, Arpad (2011) The Political Anthropology of Social Theory. 10th Annual Meeting of the International Social Theory Consortium UCC Cork, Ireland, 2011–06–16- 2011–06–17.

• Szakolczai, Arpad (2011) Theatrocracy: From Ancient to Modern. The Sixth Socratic Symposium Cambridge, UK, 2011–11–07- 2011–11–07.

Walmsley, Joel Vincent

Other Journals • Walmsley, J (2011) ‘Cognitive Science. An Introduction to the Science of Mind’. Teorema, 30 (3):186–191.

Study of Religions

Bocking, Brian

Peer Reviewed Journals • Bocking, B (2011) ‘’A Man of Work and Few Words? — Dhammaloka Beyond Burma”. Contemporary Buddhism, 11 (2):229–280. • Bocking, B.; (2011) ‘U Dhammaloka, ‘The Irish Buddhist’: rewriting the history of early western Buddhist monastics: Guest-Edited Issue of the journal Contemporary Buddhism’. Contemporary Buddhism, 11 (2):229–280. • Turner, A; Cox, L; Bocking, B; (2011) ‘Beachcombing, going native and freethinking: rewriting the history of early Western Buddhist monastics’. Contemporary Buddhism, 11 (2):125–147.

Guzy, Lidia Julianna

Books Return to President’s Report • Marine Carrine, Lidia Guzy (2011) Voices from the periphery. Subalternity and Empowerment in India. New Delhi: Routledge India. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences lv

Edited Books • Lidia Guzy, Rainer Hatoum, Susan Kamel (Ed.). (2011) From Imperial Museum to Communication Centre? On the New role of Museums as Mediators between Science and Non-Western Societies, Würzburg: Königshausen & Neumann Verlag.

Kapalo, James Alexander

Books • James Kapalo; (2011) Text, Context and Perfromance: Gagauz Folk Religion in Discourse and Practice. Leiden: Brill.

Edited Books • James Kapalo, Éva Pócs, William Ryan (eds.) (Ed.). (2011) The Power of Words, Budapest: Central European University Press.

Peer Reviewed Journals • J A Kapalo; (2011) ‘Genre and Authority in the Genesis of Charm and Prayer’. Incantatio, 1 (1). • Kapalo, JA; Travagnin, S; (2011) ‘Religionizing Fieldwork, Fieldworking Religion, Special Edition of the Journal Fieldwork in Religion’. Fieldwork in Religion, 5 (2).

Scharbrodt, Oliver

Books • Oliver Scharbrodt (2011) Islam and the Baha’i Faith: A Comparative Study of Muhammad ‘Abduh and ‘Abdul-Baha ‘Abbas (paperback). London: Routledge.

Book Chapters • Oliver Scharbrodt (2011) ‘Islam in Ireland: Organising a Migrant Religion’ In: Olivia Cosgrove et al (Eds.). Ireland’s New Religious Movements. Newcastle-upon-Tyne: Cambridge Scholars Press. • Scharbrodt, Oliver; (2011) ‘The Qutb as Special Representative of the Hidden Imam: The Conﬂation of Shii and Suﬁ Vilayat in the Ni’matullahi Order’ In: Denis Herman & Sabrina Mervin (Eds.). Shi’ite Streams and Dynamics in the Modern Era (XVIIIth — XXth Centuries). Beirut: Orient-Institut Beirut.

Peer Reviewed Journals • Oliver Scharbrodt, Tuula Sakaranaho; (2011) ‘Islam and Muslims in the Republic of Ireland: an introduction’. Journal of Muslim Minority Affairs, 31. • Oliver Scharbrodt; (2011) ‘Manfred Hutter: Handbuch Baha’i — Geschichte, Theologie, Gesellschaftsbezug (book review)’. Anthropos, 106. Return to President’s Report • Oliver Scharbrodt; (2011) ‘Moulding the Public Image of Islam in Europe: the Shiis of Ireland as moderate Muslims’. Journal of Muslim Minority Affairs, 31. UCC Research Publications 2011–2012 | College of Arts, Celtic Studies, and Social Sciences lvi

Shanneik, Yafa

Peer Reviewed Journals • Yafa Shanneik (2011) “Conversion and Religious Habitus: The Experiences of Irish Women Converts to Islam in the Pre-Celtic Tiger Era”. Journal of Muslim Minority Affairs, 31 (4):507–521. • Yafa Shanneik (2011) “James Hodkinson and Jeffrey Morrison (eds.): Encounters with Islam in German Literature and Culture’ (book review)’. Germanistik In Ireland.

Return to President’s Report UCC Research Publications 2011–2012 | College of Business and Law lvii

College of Business and Law

Accounting, Finance, and Information Systems

Adam, Frederic

Book Chapters • Heavin, C. and Adam, F.; (2011) ‘Preparing for Change: Leveraging Knowledge Activities to enhance Organisational Preparedness in the Case of an Irish Software SME’ In: E-Business Issues, Challenges and Opportunities for SMEs driving Competitiveness. Hershey, Pennsylvania: IGI Global.

Butler, Thomas

Book Chapters • Butler, T.; (2011) ‘Institutional Change and Green IS: Towards Problem-driven, Mechanism-based Explanations’ In: Yogesh K. Dwivedi, Michael R. Wade and Scott L. Schneberger (Eds.). Information Systems Theory: Explaining and Predicting Our Digital Society. New York: Springer. • T. Butler; (2011) ‘Regulating Green IT: Laws, Standards, and Protocols’ In: San Murugesan and G.R. Gangadharan (Eds.). Harnessing Green IT: Principles and Practices. United Kingdom: John Wiley Sons.

Peer Reviewed Journals • T. Butler; (2011) ‘Institutional Imperatives on Environmental Sustainability: A Sense Making Perspective on Green IS’.Journal of Strategic Information Systems, 20 (1):6–26.

Conference Publications • T. Butler; (2011) Towards a Practice-Oriented Green IS Framework. 19th European Conference on Infromation Systems (ECIS).

Cao, Tong Yu

Peer Reviewed Journals • Tongyu Cao; (2011) ‘Pension Fund Share Transactions and Board Dynamics — UK Evidence’. Investment Management and Financial Innovations Journal, 8 (1):85–95.

Carton, Fergal

Book Chapters

Return to • Carton, F. Adam, F. and Brézillon, P. (2011) ‘Why Real-Time Transaction Processing Fails to Capture the Context Required for Decision Support’ In: President’s Report Frada Burstein, Patrick Brézillon and Arkady Zaslavsky (Eds.). Supporting Real Time Decision-Making, The Role of Context in Decision Support on the Move. New York: Springer. UCC Research Publications 2011–2012 | College of Business and Law lviii

Conference Publications • Carton, F., Liottier, M. and Gollogly, M. (2011) Quantitative analysis in Enterprise Systems adoption: Building an integrated chain of evidence. 5th International Conference on Research and Practical Issues of Enterprise Information Systems (CONFENIS 2011). Cotter, Derry

Books • Derry Cotter (2011) Advanced Financial Reporting: A Complete Guide to IFRS. London: Pearson Education. Other Journals • Cotter, D. (2011) ‘That’s Summa Story: From the caves to Cafe Pacioli’ Accountancy Ireland, 43 (1):50–53. Conference Publications • Cotter, D. (2011) The Case of AIB and ICI: The Measurement and Disclosure of a Liability. Irish Academy of Management. Csaki, Csaba

Conference Publications • Csáki, C., Adam, F.; (2011) Relationships between Public Procurement Regulations, Processes and ICT: a Case Study. In: Trauner Druck, Linz, Austria eds. eGov2011 IFIP 8.5 Conference on e-Government and eParticiapation 2011 Delft, The Netherlands, 2011–08–29- 2011–09–02. • O’Brien, L., Giller, K., Tan, K-T., McCarthy, J.B., Csáki, C., and Adam , F. ; (2011) Conﬂicting Expectations in Transforming Government Service Processes: The Story of E-Payment for Social Welfare in Ireland. In: Ghoneim, A., Weerakkody, V. and Kamal, M eds. Transformational Government Workshop 2011 (tGOV11) Brunel University, West London, 2011–03–17- 2011–03–18. Daly, Mary

Other Journals • Mary Daly, Frederic Adam; (2011) ‘Understanding Organisational Decision Support Maturity — Case studies of Irish organisations’ International Journal of Decision Support System Technology, 3 (2):57–78. Doran, John

Peer Reviewed Journals • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Adapting Case-Based Teaching to Large Class Settings: An Action Research Approach’. Accounting Education, Vol. 20 (3):245–263. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Case Studies in Large and Small Classes: Common Approaches, Different Responses’. The Irish Accounting Review, 18 (1):1–17. Return to President’s Report • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘From Beyond the Grade: Reﬂections on Assessments in the Context of Case-based Teaching’. The Irish Journal of Management (incorporating IBAR), 31 (1):3–19. UCC Research Publications 2011–2012 | College of Business and Law lix

• Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) No Easy Answers: Perspectives on Traditional Forms of Assessment. Irish Accounting & Finance Association 24th Annual Conference. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) Worth More than Marks? — The student perspective on the value of acquiring broader skills. HEA BMAF 6th Annual Conference.

Published Reports • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) Learning with Case Studies: Practical Approaches to the Large Class Challenge. Chartered Accountants Ireland.

Healy, Margaret

Peer Reviewed Journals • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Adapting Case-Based Teaching to Large Class Settings: An Action Research Approach’. Accounting Education, Vol. 20 (3):245–263. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Case Studies in Large and Small Classes: Common Approaches, Different Responses’. The Irish Accounting Review, 18 (1):1–17. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘From Beyond the Grade: Reﬂections on Assessments in the Context of Case-based Teaching’. The Irish Journal of Management (incorporating IBAR), 31 (1):3–19.

Heavin, Ciara

Hutchinson, Mark

Peer Reviewed Journals • Connolly C. and Hutchinson M. C.; (2011) ‘Dedicated Short Bias Hedge Funds: Diversiﬁcation and Alpha during Financial Crises’. The Journal of Alternative Investments.

Return to • D. Bowen, M. Hutchinson and N. O’ Sullivan; (2011) ‘Predictability Revisited: UK Equity Returns, 1965 — 2007’. Irish Accounting Review. President’s Report UCC Research Publications 2011–2012 | College of Business and Law lx

Mccutcheon, Maeve

Peer Reviewed Journals • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Adapting Case-Based Teaching to Large Class Settings: An Action Research Approach’. Accounting Education, Vol. 20 (3):245–263. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Case Studies in Large and Small Classes: Common Approaches, Different Responses’. The Irish Accounting Review, 18 (1):1–17. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘From Beyond the Grade: Reﬂections on Assessments in the Context of Case-based Teaching’. The Irish Journal of Management (incorporating IBAR), 31 (1):3–19.

Conference Publications • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) ‘Marks out of 10’: The Student View on Assessment. British Accounting and Finance Association (BAFA) Accounting Education Special Interest Group Annual Conference. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) No Easy Answers: Perspectives on Traditional Forms of Assessment. Irish Accounting & Finance Association 24th Annual Conference. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) Worth More than Marks? — The student perspective on the value of acquiring broader skills. HEA BMAF 6th Annual Conference.

Published Reports • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) Learning with Case Studies: Practical Approaches to the Large Class Challenge. Chartered Accountants Ireland.

Mcinerney, Celine

Conference Publications • Celine McInerney; (2011) Valuing interconnector transmission rights — an arbitrage or options approach? Irish Accounting and Finance Association.

Nagle, Tadhg

Peer Reviewed Journals • Westerski, A., Iglesias, C. A. and Nagle, T.; (2011) ‘The Road from Community Ideas to Organisational Innovation: A Life Cycle survey of Idea Management Systems’. International Journal of Web Based Communities. Return to President’s Report UCC Research Publications 2011–2012 | College of Business and Law lxi

O’Callaghan, Steve

Peer Reviewed Journals • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Adapting Case-Based Teaching to Large Class Settings: An Action Research Approach’. Accounting Education, Vol. 20 (3):245–263. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S. (2011) ‘Case Studies in Large and Small Classes: Common Approaches, Different Responses’. The Irish Accounting Review, 18 (1):1–17. • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) ‘From Beyond the Grade: Reﬂections on Assessments in the Context of Case-Based Teaching’. The Irish Journal of Management (incorporating IBAR), 31 (1):3–19.

Published Reports • Doran, J., Healy, M., McCutcheon, M. & O’Callaghan, S (2011) Learning with Case Studies: Practical Approaches to the Large Class Challenge. Chartered Accountants Ireland.

O’Sullivan Rochford, Claire

Conference Publications • Neville K., Woodworth S., O’ Sullivan Rochford C., McInerney C.; (2011) An Interactive Financial Learning Management System. The Irish, Accounting and Finance Association Annual Conference, University College Cork. • O’ Brien F., Brosnan S., O’ Sullivan Rochford C.; (2011) An Examination of Practitioner’s Views in relation to IFRS and the US Convergence Project. The Irish Accounting and Finance Association, Annual Conference, University College Cork.

Sammon, David

Peer Reviewed Journals Return to • O’Raghallaigh, P., Sammon, D. and Murphy, C. (2011) ‘ARe-Conceptualisation of Innovation Models to Support Decision Design’. Journal of President’s Report Decision Systems. UCC Research Publications 2011–2012 | College of Business and Law lxii

Conference Publications • Nagle, T., McAvoy, J. and Sammon, D. ; (2011) Utilising Mindfulness to Analyse Agile Global Software Development. The 19th European Conference on Information Systems (ECIS2011), Aalto University School of Economics, Helsinki, Finland, 2011–06–09- 2011–06–11.

• O’Raghallaigh, P., Sammon, D. and Murphy, C. ; (2011) Building towards a Software Based Innovation Modelling Tool. In: Springer series of Lecture Notes in Business Information Processing eds. The 7th International Workshop on Enterprise & Organizational Modeling and Simulation (EOMAS 2011) London, UK, 2011–06–20- 2011–06–21.

• O’Raghallaigh, P., Sammon, D. and Murphy, C. ; (2011) Demonstrating the Prototype of a Software Based Innovation Modelling Tool. In: Springer series of Lecture Notes in Business Information Processing eds. The 7th International Workshop on Enterprise & Organizational Modeling and Simulation (EOMAS 2011) London, UK, 2011–06–20- 2011–06–21.

• O’Raghallaigh, P., Sammon, D. and Murphy, C. ; (2011) The Design of Effective Theory. The International and Inter-disciplinary Workshop on Practice Research. Aalto University School of Economics, Helsinki, Finland, 2011–06–08- 2011–06–08. • O’Raghallaigh, P., Sammon, D. and Murphy, C. ; (2011) Towards an Ontology of Innovation Models: a Conceptual Framework. The 19th European Conference on Information Systems (ECIS2011), Aalto University School of Economics, Helsinki, Finland, 2011–06–09- 2011–06–11. • Sammon, D., Nagle, T. and McAvoy, J. ; (2011) The ISD Process as a ‘Live Routine’. The 5th European Conference on Information Management and Evaluation (ECIME2011). Dipartimento di Informatica e Comunicazione, Università dell’Insubria, Como, Italy, 2011–09–08- 2011–09–09. • Sammon, D., Nagle, T., O’Raghallaigh, P. and Finnegan, P. ; (2011) Design of a Pedagogical Artefact for Doctoral Researchers to Assess Theoretical Strength. The 19th European Conference on Information Systems (ECIS2011), Aalto University School of Economics, Helsinki, Finland, 2011–06–09- 2011–06–11.

Centre for Policy Studies

Kenneally, Martin

Peer Reviewed Journals • Kenneally Martin and Valerie Walshe; (2011) ‘Reducing Public Health Spending on Community Drug Schemes’. Value in Health.

• Kenneally, Martin and Keith Jakee; (2011) ‘Compulsory Voting: What Difference can Increasing Turnout Make?’. Journal of Theoretical Politics. • Kenneally, Martin and Keith Jakee; (2011) ‘Satellite accounts of the tourism industry: structure, representation and estimates for Ireland’. Tourism Economics. • Kenneally, Martin and Lea Marty; (2011) ‘Common Water Resources in the Occupied Palestinian Territories: Conﬂict & Co-operative Solutions’. World Bank Research Observer.

Return to • MacFeely, Steve, Martin Kenneally and Richard Moloney; (2011) ‘AStudy of NUTS 2 Administrative Regions using Input-Output Analysis’. Journal President’s Report of the Statistical and Social Enquiry Society of Ireland. UCC Research Publications 2011–2012 | College of Business and Law lxiii

Moloney, Richard

Peer Reviewed Journals • MacFeely Steve, Martin Kenneally and Richard Moloney; (2011) ‘AStudy of the NUTS 2 Administrative Regions using Input-Output Analysis’. Journal of the Statistical and Social Enquiry Society of Ireland. • Ryan M, Moloney R. and Deegan J.; (2011) ‘AFactor Analysis of the North American Coach Tour Sector in Ireland’. Global Business & Economics Anthology, 1:75–86.

Conference Publications • Hobbs, J., Walsh M., Crawley, A. and Moloney, R. (2011) Researching the potential of the Irish biotech sector. Irish Academy of Management Annual Conference (Available Online @ http://bit.ly/iamireland).

Published Reports • Moloney, R.; (2011) The Economic Contribution of the Port of Cork to Irish Economy — An Update. Port of Cork Company.

O’Ceileachair, Alan

Peer Reviewed Journals • Tilson L, Sharp L, Usher C, Walsh C, S W, O’Ceilleachair A, Stuart C, Mehigan B, John Kennedy M, Tappenden P, Chilcott J, Staines A, Comber H, Barry M (2011) ‘Cost of care for colorectal cancer in Ireland: a health care payer perspective’. European Journal of Health Economics, Epub ahead of publication. • Ó Céilleachair A, Finn C, Deady S, Carsin AE, Sharp L. Have developments in palliative care services impacted on place of death of colorectal cancer patients in Ireland? (2011) ‘Have developments in palliative care services impacted on place of death of colorectal cancer patients in Ireland? A population-based study’. Irish Journal of Medical Science, 180 (1):91–96.

Ryan, Marie

Peer Reviewed Journals • Ryan M, Moloney R. and Deegan J.; (2011) ‘AFactor Analysis of the North American Coach Tour Sector in Ireland’. Global Business & Economics Anthology, 1:75–86.

Woods, Noel

Peer Reviewed Journals

Return to • H.Guiney, N.Woods, H.Whelton, D.O’Mullane; (2011) ‘Non-biological factors associated with tooth retention in Irish adults’. Community Dental President’s Report Health: Journal of the British Association for the Study of Community Dentistry and the European Association of Dental Public Health, 28 (1):53–59. UCC Research Publications 2011–2012 | College of Business and Law lxiv

• H.Guiney, N.Woods, H.Whelton, K.Morgan. (2011) ‘Predictors of Utilisation of Dental Care Services in a Nationally Representative Sample of Adults’. Community Dental Health: Journal of the British Association for the Study of Community Dentistry and the European Association of Dental Public Health, 28 (4):269–273.

• McKenna G, Allen PF, O’Mahony D, Flynn A, DaMata C, Cronin M, Woods N; (2011) ‘Impact of tooth replacement strategies on the nutritional status of partially dentate elders’. Gerodontology.

• G. McKenna, N. Woods, PF. Allen, D. O’Mahony, M. Cronin, C. Normand.; (2011) Cost effectiveness of tooth replacement strategies for partially dentate elders. 89th General Session and Exhibition of the International Association for Dental Research, San Diego Convention Center, San Diego, California, USA, 2011–03–16- 2011–03–19.

Economics

Blackshields, Daniel

Conference Publications • Daniel Blackshields, James Cronin, Juilanne Nyhan; (2011) Integrative learning and technoculture: what’s at stake? NAIRTL/LIN Conference. • Daniel Blackshields; (2011) Scaffolding Minds Less Ordinary: Transforming Economics Thinking by Intelligent Looking. In: Catherine O Mahony and Avril Buchanan eds. Engaging Minds 5th Annual NAIRTL Conference UCC, Cork.

Bourke, Jane

Peer Reviewed Journals • Jane Bourke & Stephen Roper; (2011) ‘In with the new: the determinants of prescribing innovation in Ireland’. European Journal of Health Economics, forthcoming.

Thesis/Dissertation • Bourke, Jane (2011) Adoption of Innovations in Irish General Practices: Prescription Drugs, Medical Equipment and ICT. Thesis/Dissertation.

Brady, Gerard

Return to Thesis/Dissertation President’s Report • Gerard Brady (2011) Firm innovation in the Baltic countries — An innovation production function approach. Thesis/Dissertation. UCC Research Publications 2011–2012 | College of Business and Law lxv

Considine, John

Peer Reviewed Journals • Brendan Kennelly, John Considine, and Darragh Flannery; (2011) ‘Online Assignments in Economics: A Test of their Effectiveness’. Journal of Economic Education, 42 (2):136–146.

Doran, Justin

Conference Publications • Doran J. and D. Jordan; (2011) We Are Where We Are: A Statistical Snapshot of West Cork. Launch of Future West Cork Week. • Doran J. and G. Ryan (2011) Regulation and Firm Perception, Eco-Innovation and Firm Performance. Department of Economics Winter 2011 Research Symposium. • Doran J. and R. Butler; (2011) Competing Explanations of Economic Growth: Comparing NEG and Neoclassical growth theory for EU Regions. Irish Society of New Economists 8th Annual Conference.

• Doran, J and E. O’Leary (2011) The Interaction between Internal R & D Performance and External Networking for Innovation: Evidence from the Irish CIS 2nd Annual International Conference on Networking, Learning and Entrepreneurship.

• Doran, J. and D. Jordan; (2011) Cross Sectoral Differences in the Drivers of Innovation: Evidence from the Irish Community Innovation Survey. European Network on Industrial Policy (Evaluating Innovation Workshop). • Doran, J. and D. Jordan; (2011) Cross-Sectoral Differences in the Drivers of Innovation: Evidence from the Irish Community Innovation Survey. CSO — 3rd Business Statistics Seminar. • Doran, J. and D. Jordan; (2011) Decomposing European Income Inequalities: National Perspectives on European Level Cohesion. Regional Studies Association Annual International Conference 2011. • Doran, J. and R. Butler; (2011) Competing Explanations of Economic Growth: Comparing NEG and Neoclassical growth theory for EU Regions. Department of Economics Summer 2011 Research Symposium.

• Doran, J., E. O’Leary and D. Jordan; (2011) Irish Innovation Policy and Regional Development. Irish Regions in the Smart Economy — RSA Irish Branch.

• Doran, J.; (2011) An Analysis of the Links Between Exports, Innovation and Productivity. Regional Science Association International — British and Return to Irish Section 40th Annual Conference. President’s Report UCC Research Publications 2011–2012 | College of Business and Law lxvi

Doyle, Eleanor

Peer Reviewed Journals • Eleanor Doyle and Inmaculada Martinez-Zarzoso; (2011) ‘Productivity, Trade, and Institutional Quality: A Panel Analysis’. Southern Economic Journal, 77 (3):726–752. Eakins, John

Other Journals • John Eakins; (2011) ‘ADouble Hurdle Model of Irish Residential Energy Expenditures’. Department of Economics, University College Cork, Working Paper #11–07. • John Eakins; (2011) ‘AnInvestigation into the Factors Affecting the Level of Possession of Cars across Irish Households’ Department of Economics, University College Cork, Working Paper #11–06. Conference Publications • John Eakins; (2011) An Econometric Analysis of Irish Residential Transport Expenditures. Proceedings of the Irish Transport Research Network: Energy and Transport Annual Conference 2011. Jordan, Declan

Books • Declan Jordan; (2011) Innovation, Interaction and Space: Interaction and proximity for high-tech business-level innovation. Germany: LAP Lambert Academic Publishing. Peer Reviewed Journals • Jordan D and O’Leary E (2011) ‘The Role of External Interaction for Innovation in Irish High-technology Businesses’. International Journal of Entrepreneurship and Innovation, 12 (4):248–256. Conference Publications • Declan Jordan and Justin Doran; (2011) Decomposing European Income Inequalities: National Perspectives on European Level Cohesion. Regional Studies Association Annual International Conference 2011. • Doran J. and D. Jordan; (2011) We Are Where We Are: A Statistical Snapshot of West Cork. Launch of Future West Cork Week. • Doran, J. and D. Jordan; (2011) Cross Sectoral Differences in the Drivers of Innovation: Evidence from the Irish Community Innovation Survey. European Network on Industrial Policy (Evaluating Innovation Workshop). • Doran, J. and D. Jordan; (2011) Cross-Sectoral Differences in the Drivers of Innovation: Evidence from the Irish Community Innovation Survey. CSO — 3rd Business Statistics Seminar. Return to President’s Report • Doran, J., E. O’Leary and D. Jordan; (2011) Irish Innovation Policy and Regional Development: Irish Regions in the Smart Economy — RSA Irish Branch. UCC Research Publications 2011–2012 | College of Business and Law lxvii

Magazine Article • Declan Jordan (2011) Mortgage Debt Forgiveness Could be a Permanent Solution to a Temporary Problem.

Kavanagh, Ella

Book Chapters • Kavanagh, E. (2011) ‘Abrief history of saving and credit in Ireland’ In: The Origins, Ethos and Evolution of Co-operative Credit in Ireland. UCC: Centre for Co-operative Studies.

Conference Publications • Collins, A. Kavanagh, E. and George, R.; (2011) Modelling Store Deal Proneness: An Economic Perspective. 16th Conference of the European Association for Education and Research in the Commercial Distribution (EAERCD).

Mccarthy, Noirin

Book Chapters • Dr. Geraldine Ryan, Ms. Noirin McCarthy, Mr. Richard Byrne, Ms. Ranran Xiong (2011) ‘Educating University Students; Can Mobile Technologies Help?’ In: Student Usability in Educational Software and Games: Improving Experiences. USA: IGI Global.

Conference Publications • Geraldine Ryan, Bernadette Power, Ian Stone, Paul Braidford, Noirin McCarthy (2011) Regional Inﬂuences on Business Transfers within the British Isles. Irish Academy of Management 14th Annual Conference. • Ms. Noirin McCarthy, Ms. Marie O Connor, Ms. Meadhbh Sherman (2011) Worker and Job Flows in Ireland 2006–2009. Department of Economics Research Symposium, Winter 2011.

Murphy, Aileen

Conference Publications • Murphy, A., Fenwick, E., Neilson, M., Briggs, A.H. (2011) How best to handle the evidence in a Cost-Effectiveness Analysis of TAVI in the UK? Clinical Trials Methodology Conference 2011. • Murphy, A; Fenwick E;Briggs A.; (2011) The Cost Effectiveness of TAVI as Evidence Evolves. Section of Public Health Work in Progress Seminar University of Glasgow, Glasgow, UK, 2011–06–16- 2011–06–16. • Murphy, A; Fenwick, E.; Briggs, A.; (2011) TAVI in the UK: Where do we go now? Department of Economics Research Symposium, Cork, 2011–06–28- 2011–06–28. Return to President’s Report • Murphy, A; Fenwick, E; Briggs A; (2011) Examining the Cost-Effectiveness of Transcatheter Aortic Valve Implantations in the United Kingdom as Evidence Evolves. International Health Economics Association, Toronto, Canada, 2011–07–10- 2011–08–10. UCC Research Publications 2011–2012 | College of Business and Law lxviii

O’Leary, Eoin

Peer Reviewed Journals • Doran, J. and E. O’Leary; (2011) ‘External Interaction, Innovation and Productivity: An Application of the Innovation Value Chain to Ireland’. Spatial Economic Analysis, 6 (2):199–222. • Jordan D and O’Leary E (2011) ‘The Role of External Interaction for Innovation in Irish High-technology Businesses’. International Journal of Entrepreneurship and Innovation, 12 (4):248–256. • O’Leary (2011) ‘Reﬂecting on the Celtic Tiger: Before, During and After’. Journal of Irish Economic and Social History, 18 (1):73–88.

O’Sullivan, Niall

Peer Reviewed Journals • D. Bowen, M. Hutchinson and N. O’ Sullivan; (2011) ‘Predictability Revisited: UK Equity Returns, 1965–2007’. Irish Accounting Review.

Ryan, Geraldine

Peer Reviewed Journals • Geraldine Ryan and Edward Shinnick; (2011) ‘Real Economic Indicators: Should we have paid more attention?’. Journal of Economic Policy Reform, 14 (2):105–126.

Shinnick, Edward

Peer Reviewed Journals • Geraldine Ryan and Edward Shinnick; (2011) ‘Real Economic Indicators: Should we have paid more attention?’. Journal of Economic Policy Reform, 14 (2):105–126.

Turner, Brian

Other Journals • Turner, B.; (2011) ‘Le rôle des assurances maladie privées dans le système de santé irlandais’ Revue de Droit Sanitaire et Social, 2011 (2):267–278.

Conference Paper • Turner, B.; (2011) The New Government’s Health Reform Proposals: The Good, The Bad & The Uncertain. Cork.

Return to Magazine Article President’s Report • Turner, B.; (2011) Funding the Irish health system: the options. eolas m. UCC Research Publications 2011–2012 | College of Business and Law lxix

Food Business and Development

Bogue, Joseph

Book Chapters • Troy, A. and Bogue, J. (2011) ‘Designing market-oriented beta-glucan enriched functional foods through conjoint analysis: evidence of differing consumer preferences’ In: A Resilient European Food Industry in a Challenging World. United States: Nova publications.

Conference Publications • Collins, O. and Bogue, J. (2011) Food choice, acceptability and healthy well-being in ageing populations. Ageing Globally, Ageing Locally, Dublin, 2011–11–02- 2011–11–03. • Onakuse S. Bogue J. and Eamon L (2011) The Links between Indigenous Crop Cultivation and Household Food Security in Kerewan, The Gambia. International Scientiﬁc Conference. • Onakuse, S., Bogue, J. and Lenihan E. (2011) The Links Between Indigenous Crop Cultivation and Household Food Security in Kerewan, The Gambia. Agrarian Perspectives XX Challenges and Opportunities for the Future 2011–09–13- 2011–09–14.

Byrne, Noreen

Book Chapters • Byrne, N; Ward, M; Prendergast, K and C. Power; (2011) ‘Mergers and Federation: A place for both in the development of Irish Credit Unions’ In: Power, C; O’Connor, R, McCarthy, O and M. Ward (Eds.). The Orgins, Ethos and Evolution of Co-operative Credit in Ireland. Cork: University College Cork.

Carroll, Bridget

Book Chapters • Carroll, B. ; (2011) ‘Linkages between credit unions and other co-operative sectors in Ireland’ In: Power, C., O’Connor, R. & McCarthy, O (Eds.). The Centenary of the Birth of Nora Herlihy, Credit Union Pioneer. Cork: Centre for Co-operative Studies, Universty College Cork.

Collins, Alan

Peer Reviewed Journals Return to President’s Report • Collins, A. Burt,S.L.; (2011) ‘Below Cost Legislation: Lessons from the Republic of Ireland’. The International Review of Retail, Distribution and Consumer Research. UCC Research Publications 2011–2012 | College of Business and Law lxx

• O’Sullivan, S., Richardson, B., Collins, A.; (2011) ‘How Brand Communities Emerge: The Beamish Conversion Experience’. Journal of Marketing Management.

Enright, Patrick

Peer Reviewed Journals • O’Shaughmnessy M. Casey E & Enright, P.; (2011) ‘Rural transport in peripheral rural areas: The role of social enterprises in meeting the needs of rural citizens’. Social Enterprise Journal, 7 (2):183–190.

Mccarthy, Mary

Book Chapters • McCarthy, M. Cowan, C. and Wycherley A.; (2011) ‘Speciality Food Segments in Great Britian’ In: A Resilient European Food Industry in a Challanging World. New york: Nova Science Publishers, Inc.

Peer Reviewed Journals • Cronin J and McCarthy M. ; (2011) ‘Preventing game over: a study of the situated food choice inﬂuences within the videogames subculture’. Journal of Social Marketing.

• De Brun, McKenzie, K., McCarthy, M and McGloin, A. ; (2011) ‘The Emergence and Portrayal of Obesity in The Irish Times: Content Analysis of Obesity Coverage 1997–2009, Health Communication’. • Murphy, C., Henchion, M. McCarthy, M. & Williams, G.A.; (2011) ‘The prospect for accepotance of animal cloning in the European food chain: early insights from an Irish sentinal group’. AgBioForum, 14 (2):83–93.

Mccarthy, Olive

Book Chapters • Byrne, N., Power, C., McCarthy, O. and Ward, M.; (2011) ‘The role of credit unions in ﬁnancial capability’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • McCarthy O. (2011) ‘From the US to Cork: a brief history of the founding of Ballyphehane Credit Union’ In: The Origins, Ethos and Evolution of Return to Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for President’s Report Co-operative Studies, UCC. UCC Research Publications 2011–2012 | College of Business and Law lxxi

• McCarthy, O., Briscoe R. and Ward M.; (2011) ‘Anoverview of co-operatives and the co-operative ethos in Ireland’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • Power, C., O’Connor, R., McCarthy, O. and Ward, M. (2011) ‘Credit unions and community wellbeing’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Centre for Co-operative Studies, University College Cork.

Edited Books • Power C., O’Connor R., McCarthy O. and Ward M (Ed.). (2011) The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the centernary of the birth of Nora Herlihy, Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, University College Cork.

Published Reports • Moroney A., Briscoe R., McCarthy O., O’Shaughnessy M., Ward M. (2011) Effective structures for farmers’ markets in Ireland. Department of Agriculture.

O’Shaughnessy, Mary

Conference Publications • Curtis, A., O’ Shaughnessy, M, Ward, M. (2011) ; (2011) ‘Anexamination of the tensions and challenges associated with operating as a social enterprise — the case of Irish social enterprises.’ 3rd EMES International Research Conference on Social Enterprise, Social Innovation through Social Entrepreneurship in Civil Society Available at http://www.emes.net/index.php?id=538.

Published Reports • O’ Shaughnessy, M., O’ Connor, H., Smiddy, C.; (2011) EU Support for Farmers’ Co-operatives — Ireland Country Report. DG Agri.

Onakuse, Stephen

Conference Publications • Onakuse S. (2011) Food Crisis in Africa: political and economic perspective on agricultural development. The 18th Conference of Action For Ireland (AFRI) ‘Seed for Change’. • Onakuse S. Bogue J. and Eamon L (2011) The Links between Indigenous Crop Cultivation and Household Food Security in Kerewan, The Gambia. Return to International Scientiﬁc Conference. President’s Report • Onakuse, S. (2011) Sustainable Development and Food Policy Issues across the Globe. AGRINATURA Workshop and Research Methodology. UCC Research Publications 2011–2012 | College of Business and Law lxxii

Steiner, Bodo

Peer Reviewed Journals • B. Steiner; (2011) ‘Contracting in the wine supply chain with bilateral moral hazard, residual claimancy and multitasking’. European Review of Agricultural Economics, :1–27. • Steiner, B.; Ali, J.; (2011) ‘Government support for the development of regional food clusters: Evidence from Alberta, Canada’. International Journal of Innovation and Regional Development, 3 (2):186–216. Ward, Michael

Book Chapters • Byrne N., Ward M., Prendergast K., Power C. (2011) ‘Amalgamationand federated co-operative models: A place for both in the development of the Irish credit union movement’ In: Power C., O’Connor R., McCarthy O., Ward M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • Byrne, N., Power, C., McCarthy, O. and Ward, M.; (2011) ‘The role of credit unions in ﬁnancial capability’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • McCarthy, O., Briscoe R. and Ward M.; (2011) ‘Anoverview of co-operatives and the co-operative ethos in Ireland’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • Power, C., O’Connor, R., McCarthy, O. and Ward, M.; (2011) ‘Credit unions and community wellbeing’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. Edited Books • Power, C., O’Connor, R., McCarthy, O. and Ward, M (Ed.). (2011) The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the Centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. Peer Reviewed Journals • Murtagh, A. & Ward M. (2011) ‘Structure and Culture: The Evolution of Irish Agricultural Cooperation’. Journal of Rural Co-Operation, 39 (2). Government

Buckley, Fiona

Book Chapters Return to President’s Report • Buckley, F. and Galligan, Y.; (2011) ‘Women’s Political Leadership in Spain, Germany and the United Kingdom’ In: Gretchen Bauer and Manon Tremblay (Eds.). Women in Executives: A Global Overview. London: Routledge. UCC Research Publications 2011–2012 | College of Business and Law lxxiii

• Buckley, F. and McGing, C.; (2011) ‘Women and the Election’ In: Michael Gallagher and Michael Marsh (Eds.). How Ireland Voted 2011. London: Palgrave MacMillan.

Peer Reviewed Journals • Buckley, F.; (2011) ‘Online Discussion Forums’. European Political Science, doi:10.1057/eps.2010.76.

Other Journals • Buckley, F. ; (2011) ‘After the Ballot: What lies ahead for Ireland after the general election’ UCC News, March 2011 (59):3–6. • Buckley, F.; (2011) ‘Legislating for Gender Quotas in Ireland’. Public Affairs Ireland, July/August (78):6–7.

Book Reviews • Buckley, F.; (2011) Review of Irish Women and Street Politics 1956–1973 by Tara Keenan-Thomson. Irish Journal of Public Policy.

Collins, Neil

Book Chapters • Butler, P. and N. Collins (2011) ‘Political Marketing: Structure and Process’ In: Political Marketing. London: Sage.

Peer Reviewed Journals • Butler, P., N. Collins and R. Speed (2011) ‘Butler, P., N. Collins aThe Europeanisation of the British Political Marketplace’. Journal of Marketing Management, 27 (8):675–690.

• Patrick Butler, Neil Collins & Richard Speed ; (2011) ‘The Europeanisation of the British political marketplace’. Journal of Marketing Management, 27 (8):675–690.

Harris, Clodagh

Peer Reviewed Journals • Clodagh Harris; (2011) “Expanding Political Science’s signature pedagogy — the case for service learning”. European Political Science. • Fiona Buckley, Clodagh Harris, Monica O’Mullane and Theresa Reidy; (2011) ‘Developing a political science curriculum for non-traditional students’. European Political Science, 10 (2):248–258. • Harris Clodagh and Schoen Quinlivan Emmanuelle; (2011) ‘Assessing the merits of deliberative processes in engaging and informing citizens: a case study of a deliberative event on Irish women’s voices on Europe’. Irish Journal of Public Policy.

Return to President’s Report UCC Research Publications 2011–2012 | College of Business and Law lxxiv

Murphy, Mary C.

Books • Murphy, Mary C. ; (2011) Northern Ireland and the European Union: The Dynamics of a Changing Relationship. Manchester: Manchester University Press.

Peer Reviewed Journals • Mary C. Murphy ; (2011) ‘Regional Representation in Brussels and Multi-Level Governance: Evidence from Northern Ireland’. The British Journal of Politics and International Relations.

Quinlivan, Aodh

Books • Quinlivan, A.; (2011) Inside City Hall Politics — A Year in the Life of Cork City Council. Cork: Echo Publications.

Reidy, Theresa

Book Chapters • Considine, J., and Reidy, T.; (2011) ‘Department of Finance’ In: Governing Ireland. Dublin: IPA Press. • Reidy, T.; (2011) ‘Candidate Selection’ In: Michael Gallagher and Michael Marsh (Eds.). How Ireland Voted 2011. UK: Palgrave Macmillan.

Schon-Quinlivan, Emmanuelle

Books • Schon-Quinlivan, Emmanuelle; (2011) Reforming the European Commission. Houndmills, Basingstoke, Hampshire, New York: Palgrave Macmillan.

Peer Reviewed Journals • Emmanuelle Schon-Quinlivan and Clodagh Harris; (2011) ‘Assessing the merits of deliberative processes in engaging and informing citizens: a case study of deliberative event on Irish women’s voices on Europe’. Irish Journal of Public Policy, 3 (1).

Suiter, Jane

Book Chapters • Farrell David, Suiter Jane; (2011) ‘Party Policy and the Election’ In: Deirdre McCarthy (Eds.). The Week in Politics — Election 2011 and the 31st Dail. Dublin: RTE Guide Publications. Return to President’s Report • Suiter Jane, Farrell David; (2011) ‘The Parties’ Masnifestos’ In: Gallagher Michael, Michael Marsh (Eds.). How Ireland Voted 2011. London: Palgrave MacMillan. UCC Research Publications 2011–2012 | College of Business and Law lxxv

Conference Publications • Oldmixon E, Calfano B, Suiter J; (2011) Clergy as Political Elites. APSA Annual Meeting 2011. • Suiter Jane, Reidy Theresa; (2011) Economic Voting at a Time of Crisis. 6th ECPR General Conference. • Suiter Jane, Reidy Theresa; (2011) Economic Voting, A Test in PR Systems. 1st Annual General Conference of the European Political Science Association.

Weeks, Liam

Peer Reviewed Journals • Weeks, L.; (2011) ‘Crashing the Party. Does STV help independents?’. Party Politics. • Weeks, L.; (2011) ‘Rage against the machine: who is the independent voter?’. Irish Political Studies, 26 (1):19–43. • Weeks, L.; (2011) ‘Tolerable Chance or Undesirable Arbitrariness? PR-STV and the surplus vote in Ireland’. Parliamentary Affairs, 64 (2).

Other Journals • Weeks, L.; (2011) ‘Book Review: Albert Reynolds: My autobiography; Seamus Brennan. A Life in Government; Politics in a changing Ireland 1960–2007’ Irish Political Studies, 26 (1):130–132. • Weeks, L.; (2011) ‘Book Review: Irish Elections 1948–77: Results and Analysis’ Irish Political Studies, 26 (1):135–137. • Weeks, L.; (2011) ‘The Municipal Revolution in Ireland: A Handbook of Urban Government in Ireland Since 1800 by Matthew Potter (book review)’ Local Government Studies, 37 (4):467–474. Law

Cahill, Maria

Book Chapters • Maria Cahill (2011) ‘ACritical Assessment of Irish Scholarship on the Constitutional Reception of European Law’ In: Thomas Mohr & Jennifer Schweppe (Eds.). Thirty Years of the Irish Legal Scholarship. Dublin: Roundhall Press. • Maria Cahill (2011) ‘Ireland’s Constitutional Amendability and Europe’s Constitutional Ambition: The Lisbon Referendum in Context’ In: Russell Miller & Peer Zumbansen (Eds.). Transnational Law: Scholarship from the Frontier. London: Oxford University Press.

Peer Reviewed Journals • Maria Cahill (2011) ‘Constitutional Exclusion Clauses, Article 29.4.6 and the Constitutional Reception of European Law’. Dublin University Law Return to Journal, 34:74–100. President’s Report • Maria Cahill (2011) ‘McD v. L and the Incorporation of the European Convention on Human Rights’. The Irish Jurist, XLVI. UCC Research Publications 2011–2012 | College of Business and Law lxxvi

Crowley, Louise

Book Chapters • Crowley, L., and White, F., (2011) ‘Teaching Law with Technology’ In: Mohr, T., and Schweepe, J. (Eds.). Thirty Years of Legal Scholarship — The Irish Association of Law Teachers. Dublin: Thomson Round Hall.

Peer Reviewed Journals • Crowley Louise (2011) ‘Irish divorce law in a social policy vacuum — from the unspoken to the unknown’. Journal of Social Welfare and Family Law, 33 (3):227–242.

Donnelly, Mary

Books • Donnelly Mary ; (2011) The Law of Credit and Security. Dublin: Round Hall. • McCarthy J; Donnelly M; Dooley D; Campbell L; Smith D; (2011) End-of-Life Care: Ethics and Law. Cork: Cork University Press.

Peer Reviewed Journals • Donnelly Mary ; (2011) ‘Home Loan Repossessions: Powers and Obligations’. Commercial Law Practitioner, 18 (5):95–103.

• Donnelly, M; (2011) ‘Determining Best Interests Under the Mental Capacity Act’. Medical Law Review, 19:304–313. • Mary Donnelly Ursula Kilkelly; (2011) ‘Child friendly healthcare: delivering on the right to be heard’. Medical Law Review, 19 (1):27–54.

• Mary Donnelly and Maeve McDonagh; (2011) ‘Keeping the Secrets of the Dead?: An Evaluation of the Statutory Framework for Access to Information about Decesased Persons’. Legal Studies, 31 (1):42–70.

• U Kilkelly and M Donnelly (2011) ‘Participation in Healthcare: The Views and Experiences of Children and Young People’. International Journal of Children’s Rights, 19 (1):107–125.

Hedley, Stephen William

Books • Steve Hedley; (2011) Tort. Oxford: Oxford University Press.

Peer Reviewed Journals • Steve Hedley; (2011) ‘Is Private Law meaningless?’. Current Legal Problems, 2011:1–28. Return to President’s Report UCC Research Publications 2011–2012 | College of Business and Law lxxvii

Kilcommins, Shane

Book Chapters • Shane Kilcommins; (2011) ‘Criminal Justice ‘Psychoactive Substances Act 2010’. In: Irish Current Law Statutes Annotated. Dublin: Thomson Round Hall. • Shane Kilcommins; (2011) ‘Regulatory Crime’. In: M Butler, ed, Criminal Litigation, 3rd ed. Oxford: OUP.

• shane kilcommins; (2011) ‘Criminal Evidence’. In: J Schweppe and T Mohr, eds, IALT Collection of Essays (Dublin: Thomson, Round Hall). Dublin: Thomson round Hall.

Peer Reviewed Journals • Shane Kilcommins; (2011) ‘Where is our criminal justice system going?’. Irish Probation Journal.

Kilkelly, Ursula

Book Chapters • Ursula Kilkelly & Eileen Savage; (2011) ‘Legal and Ethical Dimensions of Communicating with Children and their Families’ In: Communication Skills for Children’s Nurses. London: Mcgraw Hill Press.

• Ursula Kilkelly; (2011) ‘Children and Serious Crime: the Invisible group in Irish Youth Justice’ In: Donncha O’Connell (Eds.). Irish Human Rights Yearbook. Dublin: Roundhall.

Peer Reviewed Journals • Kilkelly, U. (2011) ‘Policing, Young People, Diversion and Accountability’. Crime Law And Social Change, 55. • Mary Donnelly Ursula Kilkelly; (2011) ‘Child friendly healthcare: delivering on the right to be heard’. Medical Law Review, 19 (1):27–54.

• Ursula Kilkelly; (2011) ‘The CRC at 21: Assessing the Legal Impact’. Northern Ireland Legal Quarterly, 62 (2):143–152.

Published Reports • Kilkelly, U. (2011) A Children’s Rights Analysis of Investigation Statements. Ombudsman for Children’s Ofﬁce.

Lynch Fannon, Irene

Book Chapters • Lynch-Fannon, Irene; (2011) ‘Ireland: The Financial Crisis’ In: Hopt (Eds.). Comparative Corporate Governance. Cambridge: Cambridge Return to University Press. President’s Report UCC Research Publications 2011–2012 | College of Business and Law lxxviii

Other Journals • Irene Lynch-Fannon; (2011) ‘Asurvey of Irish Company Law relating to private and public companies in Company Laws of the European Union’ LDGJ Montchrestien.

Unpublished work • Irene Lynch-Fannon; (2011) Corporate Insolvency and Rescue (2nd Edition). • Irene Lynch-Fannon; (2011) Ireland: Corporate Governance. In: Hopt, K. (Eds) Comparative Corporate Governance.

Madden, Deirdre

Books • Madden D (2011) Medicine, Ethics and the Law. Dublin: Bloomsbury Professional.

Book Chapters • Health Information and Quality Authority (2011) ‘Ethical commentary’ In: Health technology Assessment on Prion Filtration. Cork: HIQA. • Madden D; (2011) ‘Thirty years of Medical Law’ In: Schweppe J & Mohr T (Eds.). Thirty Years of Legal Scholarship: The Irish Association of Law Teachers. Dublin: Round Hall Press.

Other Journals • Madden D (2011) ‘Assisted Reproduction in Ireland — Time to legislate’ Medico-Legal Journal of Ireland, 17 (1).

Mcdonagh, Maeve

Book Chapters • McDonagh, M. (2011) ‘FOI in Irish Local Government’ In: Worthy, B., Amos, J., Hazell, R. & Bourke, G (Eds.). Town Hall Transparency? The Impact of the Freedom of Information Act 2000 on Local Government in England. University College London: Constitution Unit.

Peer Reviewed Journals • Donnelly, M., McDonagh, M.; (2011) ‘Keeping the secrets of the dead? An evaluation of the statutory framework for access to information about deceased persons’. Legal Studies, 31 (1):42–70.

Mcintyre, Owen

Book Chapters Return to President’s Report • Owen McIntyre (2011) ‘Environmental Protection and the Human Right to Water: Complementarity and Tension’ In: L. Westra, C. Soskolne and D. Spady (Eds.). Human Health and Ecological Integrity: Ethics, Law and Human Rights. UK: Earthscan / Taylor & Francis. UCC Research Publications 2011–2012 | College of Business and Law lxxix

• Owen McIntyre (2011) ‘The Contribution of Procedural Rules to the Environmental Protection of Transboundary Rivers’ In: L. Boisson de Chazournes, C. Leb and M. Tignino (Eds.). Freshwater and International Law: The Multiple Challenges. UK / Switzerland: Edward Elgar / Univ of Geneva. • Owen McIntyre (2011) ‘The Integration Challenge: Integrating Environmental Requirements into Other Policies under European Union Law’ In: S. Kingston (Eds.). Frontiers in European Environmental Governance. UK: Routeledge. • Owen McIntyre and Mara Tignino (2011) ‘The UN Watercourses Convention and Recent Developments in International Law’ In: F. Loures and A. Rieu-Clarke (Eds.). The UN Watercourses Convention in Force: Strengthening International Law for Transboundary Water Governance. UK: Earthscan / Taylor & Francis. • Owen McIntyre; (2011) ‘Emergence of the Human Right to Water in an Era of Globalization and its Implications for International Investment Law’ In: Jeffrey F. Addicott, Md. Jahid Hossain Bhuiyan and Tareq M. R. Chowdhury (Eds.). Globalization, International Law, and Human Rights. New Delhi: Oxford University Press. • Owen McIntyre; (2011) ‘The Human Right to Water and Global Administrative Law: Mutually Supporting Concepts’ In: L. Westra, K. Bosselmann and C. Soskolne (Eds.). Globalisation and Ecological Integrity in Science and International Law. Newcastle, UK: Cambridge Scholars Publishing. • Owen McIntyre; (2011) ‘The Human Right to Water as a ‘Creature’ of Global Administrative Law: A Triumph of Good Governance Values?’ In: P. Singh and V. Kanway (Eds.). Critical International Law: Post-Realism, Post-colonialism and Transnationalism. USA: Dartmouth.

Peer Reviewed Journals • Owen McIntyre (2011) ‘International Water Resources Law and the International Law Commission Draft Articles on Transboundary Aquifers: A Missed Opportunity for Cross-Fertilisation?’. International Community Law Review, 13 (1):1–18. • Owen McIntyre (2011) ‘The World Court’s Emphasis on Procedural Rules in the Recent Pulp Mills Case: Contributing to the Progressive and Coherent Development of International Water Law’. Water Alternatives, 4 (2):124–144. • Owen McIntyre (2011) The World Court’s contribution to international water law: The Pulp Mills Case between Argentina and Uruguay. Water Alternatives, 4:2, June 2011.

Published Reports • O.McIntyre and B. Lankford (2011) Water Allocation Methodologies for the Limpopo Watercourse Commission. LIMCOM / GIZ. • Owen McIntyre (2011) Assessment of Implications for Management of Cross-Border Waters of United Kingdom Accession to the U.N. Watercourses Convention. Northern Ireland Department of the Environment / WWF (UK). • Owen McIntyre (2011) Compliance Review Report Relating to the D1 Motorway: Turany to Hubová (Slovak Republic). European Bank for Reconstruction and Development (EBRD), Project Complaints Mechanism.

Mee, John

Return to Books President’s Report • Mee, John (with Pearce, Robert A.); (2011) Land Law. Dublin: Thomson Round Hall. UCC Research Publications 2011–2012 | College of Business and Law lxxx

Book Chapters • Mee, John; (2011) ‘Burns v Burns: The Villain of the Piece?’ In: Probert, R: Herring, J; Gilmore, S (eds) (Eds.). Landmark Cases in Family Law. Oxford: Hart Publishing.

• Mee, John; (2011) ‘Proprietary Estoppel, Promises and Mistaken Belief’ In: Bright, Susan (ed) (Eds.). Modern Studies in Property Law, Volume 6. Oxford: Hart Publishing.

Peer Reviewed Journals • John Mee; (2011) ‘Resulting Trusts and Voluntary Conveyances of Land: 1674–1925’. Journal of Legal History, 32 (2):215–238. • Mee, John; (2011) ‘Cohabitation Law Reform in Ireland’. Child and Family Law Quarterly, 23 (3):323–343.

Poems • John Mee (2011) Showdown. ‘The Shop’,Volume 37, Schull, Co Cork: Poems.

• Mee, John; (2011) Paperweight. ‘The Rialto’,Volume 71, Norwich, UK: Poems.

Mullally, Siobhan

Book Chapters • S Mullally (2011) ‘Limiting the scope of integration testing: the ECJ as a Human Rights Court” In: De Bruycker P and Pascou Y (Eds.). Integration in the European Union: Which Way Now?. Brussels: Burylant.

Edited Books • Mullally S and Allain J (Ed.). (2011) Irish Yearbook of International Law (2008) vol 3, Oxford: Hart.

Peer Reviewed Journals • Mullally S and O’Donovan D; (2011) ‘Religion in Ireland’s Public Squares: Education and the Family’. Public Law. • Mullally S; (2011) ‘Civic Integration, Gender Equality and the Veil’. Modern Law Review, 74 (1):27–56.

• Mullally S; (2011) ‘Domestic Violence Asylum Claims and Recent Developments in International Human Rights Law: a progress narrative?’. International and Comparative Law Quarterly.

• Mullally S; (2011) ‘Impossible Subjects: Citizen Children, Family Life and Deportation’. European Human Rights Law Review, :43–53. • S Mullally (2011) ‘Separated Children in Ireland; Responding to ‘Terrible Wrongs”. International Journal of Refugee Law, 23 (4):632–655.

Return to • S Mullally (2011) ‘Women Peace and Security in Pakistan: the Challenge of Security Council Resolution 1325’. Irish Studies In International Affairs, President’s Report 22:53–66. UCC Research Publications 2011–2012 | College of Business and Law lxxxi

Murray, Claire

Peer Reviewed Journals • Claire Murray; (2011) ‘The Role of the Mental Health Commission in Irish Mental Health Law: Interrogating the Effectiveness of the Statutory Functions of the Commission’. Medico-Legal Journal of Ireland, 17 (2):93–104.

Blog • Claire Murray (2011) Publication of the Mental Health Commission’s 2010 Report. Blog.

Ni Mhuirthile, Tanya

Blog • Ní Mhuirthile, T.; (2011) Louise Hannon at the Equality Tribunal. Blog.

O’Mahony, Conor

Peer Reviewed Journals • Conor O’Mahony; (2011) ‘There is No Such Thing as a Right to Dignity’. International Journal of Constitutional Law.

Ryall, Aine

Peer Reviewed Journals • Ryall, A (2011) ‘Access to Justice in Environmental Matters: Pulling the Threads Together’. Irish Planning and Environmental Law Journal, 18 (4):152–160.

• Ryall, A; (2011) ‘Access to Environmental Information in Ireland: Implementation Challenges’. Journal of Environmental Law, 23 (1):45–71. • Ryall, A; (2011) ‘Registration of Residential Tenancies: Unﬁnished Business’. Conveyancing and Property Law Journal, 16 (4):70–80.

Published Reports • Environmental Protection Agency Review Group (2011) A Review of the Environmental Protection Agency. Department of Environment, Community and Local Government.

Whelan, Darius

Peer Reviewed Journals Return to President’s Report • Whelan, Darius; (2011) ‘Can the Right to Personal Liberty be Interpreted in a Paternalistic Manner?: Cases on the Mental Health Act 2001’. Irish Human Rights Law Review, 2. UCC Research Publications 2011–2012 | College of Business and Law lxxxii

White, Fidelma

Books • Bradgate and White (2011) Commercial Law (LPC). Oxford: Oxford Univerity Press. • White, F., (2011) Commercial Law. Dublin: Thomson Round Hall. • White, F., (2011) Commercial and Economic Law in Ireland. Netherlands: Kluwer.

Published Reports • Sales Law Review Group (2011) Report on the Legislation Governing the Sale of Goods and Supply of Services. Department of Enterprise, Jobs and Innovation.

Wills, Siobhan

Peer Reviewed Journals • Siobhan Wills; (2011) ‘The Legal Characterisation of the Armed Conﬂicts in Afghanistan and Iraq: Implications for Protection’. Netherlands International Law Review, LVIII (2):173–208. Management and Marketing

Buckley, Joan

Peer Reviewed Journals • Dunne, G., Buckley, J. & Flanagan, S.; (2011) ‘Towards a Decision Making Model for City Break Travel’. International Journal of Culture, Tourism and Hospitality Research, 5 (2):158–172. • Linehan, C., Buckley, J. and Koslowski, N. ; (2011) ‘Backwards and in high heels: Exploring why women are under-represented at senior academic levels 1987–2010’. Journal of Workplace Rights, 14 (4):399–418.

Other Journals • Buckley, J. & Linehan, C.; (2011) ‘Change comes dropping slow: women’s experiences of academic life’. UCC News, (59):8–9.

Return to • Buckley, J. and Linehan, C.; (2011) ‘The equality myth: Women and power in higher education’. President’s Report • Linehan, C. & Buckley, J.; (2011) ‘The choices we make: Equality and academia’ LeCheile: UCC Equality Newsletter, (2). UCC Research Publications 2011–2012 | College of Business and Law lxxxiii

Conference Publications • Buckley, J. and L. El Amoud; (2011) Key challenges for work placement in Irish HEIs. AHECS Annual Conference.

Dooley, Lawrence

Book Chapters • Gubbins, C., Dooley, L. ; (2011) ‘Social Network Analysis as a tool for knowledge management for innovation’. In: Social Network Analysis. UK: Gower.

Peer Reviewed Journals • Philpott K., Dooley L., O’Reilly, C., Lupton, G.; (2011) ‘The Entrepreneurial University: Examining the Underlying Academic Tensions’. International Journal of Technological Innovation and Entrepreneurship, 31:161–170.

Conference Publications • O’Reilly, S., Dooley, L.; (2011) The role of continuous improvement beyond operational excellence. 18th International Annual EurOMA Conference.

Kavanagh, Donncha

Books • Kavanagh, D., Keohane, K., Kuhling, C.; (2011) Organization in Play. Witney, UK: Peter Lang.

Peer Reviewed Journals • Kavanagh, Donncha (2011) ‘Work and play in management studies: A Kleinian analysis’. Ephemera: Theory & Politics in Organization, 11 (4):336–356.

Conference Publications • Kavanagh, Donncha; (2011) The Lost Experiment in Exploration and Exploitation. In: Alf Rehn, Christian De Cock, Damian O’Doherty eds. 27th EGOS Colloquium, Gothenburg University, 2011–07–06- 2011–07–09.

Kelleher, Carol

Book Chapters • Kelleher, C., Whalley, A. and Helkkula, A. (2011) ‘Collaborative Value Co-Creation in Crowd Sourced Online Communities — Acknowledging and Resolving Competing Commercial and Communal Tensions’ In: Russell W. Belk, Kent Grayson, Albert M. Muñiz, Hope Jensen Schau (Eds.). Research in Consumer Behavior. United Kingdom: Emerald Group Publishing Limite. Return to President’s Report UCC Research Publications 2011–2012 | College of Business and Law lxxxiv

Conference Publications • Helkkula, A. & Kelleher, C. (2011) Experiences and Practices — Challenges and Opportunities for Value Research. 2011 Naples Forum on Service University of Naples, Capri, Italy, 2011–06–13- 2011–06–16. • Kelleher, C., Whalley, A. and Helkkula, A. (2011) Collaborative Value Co-Creation in Crowd Sourced Online Communities — Acknowledging and Resolving Competing Commercial and Communal Tensions. Consumer Culture Theory Conference, Northwestern University, Chicago, IL, 2011–07–07- 2011–07–10.

Linehan, Carol

Peer Reviewed Journals • Linehan, C., Buckley, J. and Koslowski, N. ; (2011) ‘Backwards and in high heels: Exploring why women are under-represented at senior academic levels 1987–2010’. Journal of Workplace Rights, 14 (4):399–418. • Linehan, C.; (2011) ‘Identifying the Medical X Factor or the XY Factor: Health Professions Admission Test (HPAT) for Irish medical school entry’. Irish Journal of Public Policy, 3 (2).

Other Journals • Buckley, J. & Linehan, C.; (2011) ‘Change comes dropping slow: women’s experiences of academic life’ UCC News, (59):8–9. • Linehan, C. & Buckley, J.; (2011) ‘The choices we make: Equality and academia’ LeCheile: UCC Equality Newsletter, (2).

Mcgrath, Helen

Peer Reviewed Journals • McGrath, H and O’Toole, T (2011) ‘Challenges in implementing the market-as-networks approach to marketing for SMEs’. Irish Marketing Review, 21 (1/2):58–65. • McGrath, H. and O’Toole, T. (2011) ‘Critical issues in research design in participatory action research in an SME development context’. Journal of European Industrial Training.

Conference Publications • McGrath, H., O’Toole, T. and Sutton-Brady, C. (2011) The Evolution of Network Capability in an SME Context. International Marketing and Purchasing Conference.

Murphy, Linda

Peer Reviewed Journals Return to President’s Report • Kansikas, J., Murphy, L.; (2011) ‘Bonding Family Social Capital and Firm Performance’. International Journal of Entrepreneurship and Small Business, 14 (4):533–550. UCC Research Publications 2011–2012 | College of Business and Law lxxxv

Richardson, Brendan

Peer Reviewed Journals • Baron, S., Richardson, B., Earles, D., Khogeer, Y. (2011) ‘Marketing Academics and Practitioners: Towards Togetherness’. Journal of Customer Behaviour, 10 (Autumn):291–302. • O’Sullivan, S., Richardson, B., Collins, A.; (2011) ‘How Brand Communities Emerge: The Beamish Conversion Experience’. Journal of Marketing Management.

Conference Publications • O’Sullivan, M., & Richardson, B.; (2011) Tight knit? Evolving Relationships in a Consumption Community. Academy of Marketing Annual Conference, University of Liverpool/ Aintree. • O’Sullivan, S., & Richardson, B.; (2011) And In the Beginning There Was No Brand: The BPONG IRELAND Brand Community. Academy of Marketing Annual Conference, University of Liverpool/ Aintree. • Richardson, B. (2011) Is co-participation the new persuasion? A conceptual reﬂection on tribal marketing’s contribution to the X Factor effect. Academy of Marketing Consumer Research SIG workshop on consumer persuasion.

Scally, Kevin

Peer Reviewed Journals • Scally, K.; (2011) ‘Beware Greeks bearing steam engines: a response to the Kastelle and Steen proposition’. Prometheus: Critical Studies in Innovation, 29 (2):207–217.

Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health lxxxvi

College of Medicine and Health

Medicine and Health Ofﬁce

Higgins, John

Peer Reviewed Journals • Breathnach FM, McAuliffe FM, Geary M, Daly S, Higgins JR, Dornan J, Morrison JJ, Burke G, Higgins S, Dicker P, Manning F, Carroll S, Malone FD (2011) ‘Prediction of safe and successful vaginal twin birth’. American Journal of Obstetrics and Gynaecology, 205 (3):2370–2377. • Breathnach FM, McAuliffe FM, Geary M, Daly S, Higgins JR, Dornan J, Morrison JJ, Burke G, Higgins S, Dicker P, Manning F, Mahony R, Malone FD (2011) ‘Deﬁnition of intertwin birth weight discordance’. Obstetrics and Gynecology, 118 (1):94–103. • Ismail, SK,Higgins, JR; (2011) ‘Hemostasis in Pre-Eclampsia’. Seminars In Thrombosis and Hemostasis, 37:111–117. • Kent, EM,Breathnach, FM,Gillan, JE,McAuliffe, FM,Geary, MP,Daly, S,Higgins, JR,Dornan, J,Morrison, JJ,Burke, G,Higgins, S,Carroll, S,Dicker, P,Manning, F,Malone, FD (2011) ‘Placental cord insertion and birthweight discordance in twin pregnancies: results of the national prospective ESPRiT Study’. American Journal of Obstetrics and Gynaecology, 205. • O’Donoghue K, O’Regan KN, Sheridan CP, O’Connor OJ, Benson J, McWilliams S, Moore N, Murphy MJ, Chopra R, Higgins JR, Maher MM; (2011) ‘Investigation of the role of computed tomography as an adjunct to autopsy in the evaluation of stillbirth’. European Journal of Radiology. • Said JM, Higgins JR, Moses EK, Walker SP, Monagle PT, Brennecke SP (2011) ‘Inherited thrombophilias and adverse pregnancy outcomes: a case-control study in an Australian population’. Obstetrics and Gynecology. School of Clinical Therapies

Fletcher, Paul

Peer Reviewed Journals • O’Toole, C. & Fletcher, P. (2011) ‘Proﬁling vocabulary acquisition in Irish’. Journal of Child Language, 38:1–16.

Fourie, Robert James

Book Chapters • Robert J. Fourie; (2011) ‘From Alienation to Therapeutic Dialogue’ In: Robert J. Fourie (Eds.). Therapeutic Processes for Communication Disorders: A Guide for Clinicians and Students. London: Psychology Press.

Return to Edited Books President’s Report • Robert J. Fourie (Ed.). (2011) Therapeutic Processes for Communication Disorders: A guide for Clinicians and Students, London: Psychology Press. UCC Research Publications 2011–2012 | College of Medicine and Health lxxxvii

Peer Reviewed Journals • Fourie, R. J. & Murphy, M.; (2011) ‘Alienation and Therapeutic Connection: A phenomenological account of three patients with communication disorders associated with cancers of the head and neck’. Journal of Interactional Research in Communication Disorders, 2 (1):1–27. • Mullane, A., Conoma, J. B., & Fourie, R. J.; (2011) ‘Human rights and the Deaf community in Ireland: A critical discussion of Irish legislation’. Journal of Clinical Speech and Language studies.

Artwork • Fourie, R. J.; (2011) Texting. Artwork.

Conference Publications • Hutch, W, Leonard, U, Oliveira, A, Pettigrew, C, Fourie, R. ; (2011) Ambiguity and Aphasia: A homophone lexical decision study. UCC College of Medicine and Health: 3rd Annual Research Conference.

Gibbon, Fiona

Book Chapters • Gibbon, F; Lee, A; (2011) ‘Articulation: Instrumental techniques for research and clinical practice’ In: Howard, S. & Lohmander, A (Eds.). Cleft Palate Speech: Assessment, Analysis and Intervention. Oxford: Wiley-Blackwell. • Gibbon, F; Mackenzie Beck, J; (2011) ‘Therapy for abnormal vowels in children with phonological impairment’ In: M. Ball and F. Gibbon (Eds.). Handbook of Vowels and Vowel Disorders (2nd Edition). unknown: Psychology Press. • Lee, A; Zharkova, N; Gibbon, F; (2011) ‘Vowel Imaging’ In: M. Ball and F. Gibbon (Eds.). Handbook of Vowels and Vowel Disorders (2nd Edition). unknown: Psychology Press.

Edited Books • Ball, M.J. and Gibbon. F.E (Ed.). (2011) Handbook of Vowels and Vowel Disorders, Hove: Psychology Press.

Peer Reviewed Journals • Gibbon, F. and Lee, A. ; (2011) ‘Using EPG data to display articulatory separation for phoneme contrasts’. Clinical Linguistics and Phonetics, 25 (11–12):1014–1021. • O’Connor, C. and Gibbon, F. ; (2011) ‘Familiarity of speaker accent on Irish children’s performance on a sentence comprehension task’. Journal of Clinical Speech and Language studies. • Peppé, S.J.E., Cleland, J., Gibbon, F.E., O’Hare, A.E. and Martínez-Castilla, P.; (2011) ‘Expressive prosody in children with autism spectrum disorders’. Journal of Neurolinguistics, 24:41–53. Return to President’s Report • Wood, S., Hardcastle, W.J. and Gibbon, F.E.; (2011) ‘EPG patterns in a patient with phonemic paraphasic errors’. Journal of Neurolinguistics, 24:213–221. UCC Research Publications 2011–2012 | College of Medicine and Health lxxxviii

Lee, Alice

Book Chapters • Gibbon, F; Lee, A; (2011) ‘Articulation: Instrumental techniques for research and clinical practice’ In: Howard, S. & Lohmander, A (Eds.). Cleft Palate Speech: Assessment, Analysis and Intervention. Oxford: Wiley-Blackwell. • Lee, A., & Whitehill, T. L.; (2011) ‘Nasometry in the evaluation of resonance disorders’ In: E. P.-M. Ma & E. M.-L. Yiu (Eds.). Handbook of voice assessments. San Diego: Plural Publishing. • Lee, A; Zharkova, N; Gibbon, F; (2011) ‘Vowel Imaging’ In: M. Ball and F. Gibbon (Eds.). Handbook of Vowels and Vowel Disorders (2nd Edition). unknown: Psychology Press.

Peer Reviewed Journals • Gibbon, F. and Lee, A. ; (2011) ‘Using EPG data to display articulatory separation for phoneme contrasts’. Clinical Linguistics and Phonetics, 25 (11–12):1014–1021. • Lee, A. S.-Y.; Gibbon, F. E. (2011) ‘Non-speech oral motor treatment for developmental speech sound disorders in children (Protocol)’. Cochrane Database of Systematic Reviews, (10).

Lynch, Helen

Peer Reviewed Journals • Coughlan, M. & Lynch, H. (2011) ‘Parents as environmental managers: the Irish home as a play space for toddlers’. Irish Journal of Occupational Therapy, 39 (1):34–41.

• O’Brien, M,Lynch, H; (2011) ‘Exploring the role of touch in the ﬁrst year of life: mothers’ perspectives of tactile interactions with their infants’. Rna-A Publication of The Rna Society, 74:129–136.

• O’Brien, Mairead & Lynch, H.; (2011) ‘Exploring the role of touch in the ﬁrst year of life: mothers’ perspectives of tactile interactions with their infants’. British Journal of Occupational Therapy, 74 (3):129–136.

Conference Publications • Lynch, H., Cribbin, V. & Cousins, S.; (2011) Knowledge, skills and attitudes: an approach to sensory integration education for life-long learning. 2nd European Conference: Moving forward in Sensory Integration: theory, practice & research; An agenda for the next decade. Portugal, May 2011.

• Lynch, H.; (2011) Sensory rich environments: learning from typical child development. 2nd European Conference: Moving forward in Sensory Integration: theory, practice and research; An agenda for the next decade. Portugal, May 2011.

• O’Callaghan, J. & Lynch, H (2011) Clinical utility of the Structured Clinical Observation Tool: therapists perspectives (poster) 2nd European Return to Conference: Moving forward in Sensory Integration: theory, practice and research; An agenda for the next decade Portugal. President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health lxxxix

O’Toole, Ciara

Peer Reviewed Journals • O’Toole, C. & Fletcher, P. (2011) ‘Proﬁling vocabulary acquisition in Irish’. Journal of Child Language, 38:1–16. School of Medicine

Andrews, Emmet

Peer Reviewed Journals • Andrews EJ, Royce P, Farmer KC; (2011) ‘Transanal endoscopic microsurgery repair of rectourethral ﬁstula after high-intensity focused ultrasound ablation of prostate cancer’. Colorectal Disease, 13 (3):342–343.

Barry, Orla P

Book Chapters • Orla Patricia Barry and Carol O’ Callaghan; (2011) ‘Exploitation of aberrant signalling pathways as useful targets for renal clear cell carcinoma therapy’ In: Renal Cancer. Croatia: InTECH.

Beirne, Paul

Peer Reviewed Journals • Savage E, Beirne PV, Ni Chroinin M, Duff A, Fitzgerald AP ; (2011) ‘Self-management education for cystic ﬁbrosis’. Cochrane Database of Systematic Reviews, (1).

Bennett, Deirdre

Book Chapters • Kelly M, Bennett D, O’Flynn S. ; (2011) ‘Are we there yet? Reﬂections on Integrated Learning in a New Medical Curriculum’ In: Integrative Learning Study, The National Academy of Integrating Research and Teaching and Learning, 2010. Cork: NAIRTL.

Peer Reviewed Journals • Bennett D, Kelly M, O’Flynn S. ; (2011) ‘DREEM — Time to evaluate?’. Medical teacher. • Kelly M, Bennett D, Thakore J. ; (2011) ‘Healthy bodies for healthy minds: Monitoring Physical Health in those with enduring mental illness’. Forum, Journal of the Irish College of General Practitioners.

Return to Other Journals President’s Report • Hammond S, O’Rourke M, Kelly M, Bennett D, O’Flynn S.; (2011) ‘Apsychometric appraisal of the DREEM’ BMC Medical Education. UCC Research Publications 2011–2012 | College of Medicine and Health xc

Conference Publications • Kelly M, Bennett, D., O’ Flynn, S; (2011) General Practice, The DREEM attachment? Academic Units and Departments of General Practice Ireland AUDPI Dublin Jan 2011.

• Kelly, M; Bennett, D;O‘Flynn, S; Dornan, T; (2011) Clinical workplace learning — how to evaluate. AMEE Annual Scientiﬁc Meeting, Vienna. • O’Rourke, M; Hammond, S; Kelly, M; Bennett, D & O’Flynn, S ; (2011) Psychometric Properties of DREEM Irish Network of Medical Educators Annual Scientiﬁc Meeting May 2011 Trinity College Dublin.

Boylan, Geraldine

• Nadeem M, Murray DM, Boylan GB, Dempsey EM, Ryan CA; (2011) ‘Early blood glucose proﬁle and neurodevelopmental outcome at two years in neonatal hypoxic-ischaemic encephalopathy’. BMC Pediatrics, 11.

• Stevenson NJ, O’Toole JM, Rankine LJ, Boylan GB, Boashash B. (2011) ‘Anonparametric feature for neonatal EEG seizure detection based on a representation of pseudo-periodicity’. Medical Engineering & Physics.

• Temko A, Lightbody G, Thomas E, Boylan G, Marnane W. (2011) ‘Instantaneous Measure of EEG Channel Importance for Improved Patient-Adaptive Neonatal Seizure Detection’. IEEE Transactions On Biomedical Engineering. • Temko A, Nadeu C, Marnane W, Boylan G, Lightbody G (2011) ‘EEG signal description with spectral-envelope-based speech recognition features for detection of neonatal seizures’. IEEE Transactions on Information Technology in Biomedicine, 15 (6):839–847. • Temko, A; Thomas, E; Marnane, W; Lightbody, G; Boylan, G; (2011) ‘EEG-based neonatal seizure detection with Support Vector Machines’. Clinical Neurophysiology, 122 (3):464–473. • Temko, A; Thomas, E; Marnane, W; Lightbody, G; Boylan, G; (2011) ‘Performance assessment for EEG-based neonatal seizure detectors’. Clinical Neurophysiology, 122 (3):474–482.

Return to • Walsh BH, Boylan GB, Murray DM; (2011) ‘Nucleated Red Blood Cells and early EEG: Predicting Sarnat stage and two year outcome’. Early Human President’s Report Development. UCC Research Publications 2011–2012 | College of Medicine and Health xci

• Walsh BH, Murray DM, Boylan GB. (2011) ‘The use of conventional EEG for the assessment of hypoxic ischaemic encephalopathy in the newborn: a review’. Clinical Neurophysiology, 122 (7):1284–1294. • Walsh, B. H.,Low, E.,Bogue, C. O.,Murray, D. M.,Boylan, G. B.; (2011) ‘Early continuous video electroencephalography in neonatal stroke’. Developmental Medicine and Child Neurology, 53 (11):89–9289.:WOS:000284891900019.

Conference Publications • Temko A., Lightbody G., Boylan G., Marnane W.P., (2011) Online EEG Channel Weighting for Detection of Seizures in the Neonate. 33rd Annual International IEEE EMBS Conference Boston, MA, USA, 2011–08–30- 2011–09–03. • Temko A., Marnane W.P., Boylan G., Lightbody G., (2011) A Data-Driven Energy Based Estimator of EEG Channel Importance for Improved Patient-Adaptive Neonatal Seizure Detector. 18th IFAC World Congress Milan, Italy, 2011–08–28- 2011–09–02.

Brint, Beth

Browne, Gemma

Presentation • Gemma Browne (2011) Dietary Salt Intake, Protein Intake and Obesity in Ireland. Presentation.

Browne, John Patrick

Peer Reviewed Journals • McClimans LM, Browne J; (2011) ‘Choosing a patient-reported outcome measure’. Theoretical medicine and bioethics, 32 (1):47–60.

• Roberts B, Felix Ocaka K, Browne J, Oyok T, Sondorp E (2011) ‘Alcohol disorder amongst forcibly displaced persons in northern Uganda’. Addictive Behaviors, 36 (8):870–873. • Saunders J, Keogh BE, van der Meulen J, Browne JP, Treasure T, Mythen MG, Montgomery HE (2011) ‘The development of a post-operative morbidity score to assess total morbidity burden after cardiac surgery’. Journal of clinical epidemiology.

Cahill, Mary

Peer Reviewed Journals Return to President’s Report • Kirwan, R. P.,Cahill, M. T. (2011) ‘Nd:YAG laser hyaloidotomy for valsalva pre-macular haemorrhage’. Ir J Med Sci, 180 (33):749–52749. UCC Research Publications 2011–2012 | College of Medicine and Health xcii

Caplice, Noel

Book Chapters • John F O’Sullivan, Anne-Laure Leblond, Noel M Caplice. M Slevin (2011) ‘Key Role of Angiogenic Control in Recovery from Ischaemic Heart Disease” In: Therapeutic Angiogenesis for Vascular Diseases. DOI 10.1007/978–90–481–9495–7_12: Springer Science-Business Media B.V.

Peer Reviewed Journals • Caplice NM (2011) ‘Role of vessel wall and bone marrow syndecan-4 in newintimal hyperplasia: the plot thickens’. Arteriosclerosis Thrombosis and Vascular Biology.

• Clover AJ, Kumar AH, Caplice NM; (2011) ‘Deﬁciency of CX3CR1 delays burn wound healing and is associated with reduced myeloid cell recruitment and decreased sub-dermal angiogenesis’. Burns: journal of the International Society for Burn Injuries. • Hynes B, Kumar AH, O’Sullivan J, Klein Buneker C, Leblond AL, Weiss S, Schmeckpeper J, Martin K, Caplice NM (2011) ‘Potent endothelial progenitor cell-conditioned media-related anti-apoptotic, cardiotrophic, and pro-angiogenic effects post-myocardial infarction are mediated by insulin-like growth factor-1’. European Heart Journal. • Kumar AH, McCauley SD, Hynes BG, O’Dea J, Caplice NM; (2011) ‘Improved protocol for processing stented porcine coronary arteries for immunostaining’. Journal of Molecular Histology, 42 (2):187–193. • Kumar, AHS,McCauley, SD,Hynes, BG,O’Dea, J,Caplice, NM; (2011) ‘Improved protocol for processing stented porcine coronary arteries for immunostaining’. Rna-A Publication of The Rna Society, 42:187–193. • Metharom P, Martin K, Kumar AH, Sawhney N, Cronin MF, McCarthy DG, Maguire AR, Caplice NM; (2011) ‘Pleiotropic role for monocyte C-fms protein in response to vascular injury: Potential therapeutic target’. Atherosclerosis, 216 (1):74–82.

• O’Sullivan JF, Leblond AL, Kelly G, Kumar AH, Metharom P, Büneker CK, Alizadeh-Vikali N, Hristova I, Hynes BG, O’Connor R, Caplice NM; (2011) ‘Potent long-term cardioprotective effects of single low-dose insulin-like growth factor-1 treatment postmyocardial infarction’. Circulation-Cardiovascular Interventions, 4 (4):327–335.

• Pierce WG, Zanette C, Caplice NM, Mackrill JJ (2011) ‘Calcium signalling in adult endothelial outgrowth cells’. Biochemical and Biophysical Research Communications.

Other Journals • Martin K, O’Sullivan JF, Caplice NM (2011) ‘New therapeutic potential of microRNA treatment to target vulnerable atherosclerotic lesions and plaque rupture’ Current Opinion in Cardiology, 26 (6):569–575.

Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health xciii

Conference Publications • HS Kumar, Kenneth Martin, Noel M Caplice (2011) Deﬁciency Of CX3CR1 Receptors Results in Formation of Leaky Microvessels in Plaque. Atherosclerosis Thrombosis and Vascular Biology Conference, 28th–30th April 2011. Hilton, Chicago, Illinois,USA.

• John F O’Sullivan, Anne-Laure Leblond, John O’Dea, Ivalina Hristova, Sujith Kumar, Noel M Caplice, (2011) Multi Detector CT Accurately Deﬁnes Infarct Size, but not Microvascular Obstruction Post Myocardial Infarction, and Sodium Nitrite Increases Microvascular Obstruction Region Blood Flow Without Affecting CT Hypoenchancement Area. American Heart Association — Finalist Melvin Judkins YIA.

• John F O’Sullivan, M.D., Anne-Laure Leblond, PhD, Geraldine Kelly, BSc, Arun HS Kumar DVM, PhD, Pat Metharom, PhD, Chirlei K Büneker, PhD, Niki Alizadeh-Vikali, MSc, BHSc, Ivalina Hristova, BS, Brian G Hynes, M.D., Rosemary O’Connor, PhD, Noel M Caplice, (2011) Potent Long-term Cardioprotective Effects of Single Low Dose Insulin-like Growth Factor-1 (LD-IGF-1) Treatment Post Myocardial Infarction. Irish Cardiac Society, Winner YIA.

• John F. O’Sullivan, Anne-Laure Leblond, Pat Metharom, Arun HS Kumar, Geraldine Kelly, Eva Hristova, Brian Hynes, Rosemary O’Connor, and Noel M. Caplice (2011) Potent Cardioprotective Effects Of Low Dose Insulin-Like Growth Factor-1 (Ld-Igf-1) Treatment Post Myocardial Infarction Are Mediated Through Phosphorylation Of The Igf-1 Receptor, Gsk-3beta Inhibition And Survival Kinase Upregulation. American College of Cardiology, Winner Cardiovascular Pharmacology YIA. • Pat Metharom, Kenneth Martin, Arun HS Kumar, Noel M Caplice. (2011) Pleiotropic Role for Monocyte C–fms Protein in Response to Vascular Injury: Potential Therapeutic Target. Atherosclerosis Thrombosis and Vascular Biology Conference, 28th–30th April 2011. Hilton, Chicago, Illinois,USA.

Cryan, John F

• Finger BC, Schellekens H, Dinan TG, Cryan JF; (2011) ‘Is there altered sensitivity to ghrelin-receptor ligands in leptin-deﬁcient mice?: importance of satiety state and time of day’. Psychopharmacology. • Finger, BC,Dinan, TG,Cryan, JF (2011) ‘High-Fat Diet Selectively Protects Against The Effects Of Chronic Social Stress In The Mouse’. Return to Neuroscience, 192:351–360. President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health xciv

• Finger, BC,Dinan, TG,Cryan, JF; (2011) ‘Behavioral satiety sequence in a genetic mouse model of obesity: effects of ghrelin receptor ligands’. Behavioural Pharmacology, 22:624–632. • Julio-Pieper M, Flor PJ, Dinan TG, Cryan JF; (2011) ‘Exciting Times beyond the Brain: Metabotropic Glutamate Receptors in Peripheral and Non-Neural Tissues’. Pharmacological reviews. • Kennedy, P.J., G. Clarke, G., Quigley, E.M.M., Groeger., J.A., Dinan., T.G., Cryan. J.F. ; (2011) ‘Gut Memories: Towards a Cognitive Neurobiology of Irritable Bowel Syndrome’. Neuroscience and Biobehavioral Reviews.

• O’Brien FE, Dinan TG, Griffin BT, Cryan JF; (2011) ‘Interactions between antidepressants and P-glycoprotein at the blood-brain barrier: Clinical significance of in vitro and in vivo findings’. British Journal of Pharmacology.

• O’Leary OF, O’Connor RM, Cryan JF; (2011) ‘Lithium-induced effects on adult hippocampal neurogenesis are topographically segregated along the dorso-ventral axis of stressed mice’. Neuropharmacology. • O’Mahony, SM,Coelho, AM,Fitzgerald, P,Lee, K,Winchester, W,Dinan, TG,Cryan, JF; (2011) ‘The effects of gabapentin in two animal models of co-morbid anxiety and visceral hypersensitivity’. European Journal of Pharmacology, 667:169–174. • O’Malley D, Dinan TG, Cryan JF (2011) ‘Altered expression and secretion of colonic interleukin-6 in a stress-sensitive animal model of brain-gut axis dysfunction’. Journal of Neuroimmunology, 235 (1–2):48–55.

• O’Malley D, Quigley EM, Dinan TG, Cryan JF (2011) ‘Do interactions between stress and immune responses lead to symptom exacerbations in irritable bowel syndrome?’. Brain: a journal of neurology, 25 (7):1333–1341.

• O’Sullivan E, Barrett E, Grenham S, Fitzgerald P, Stanton C, Ross RP, Quigley EM, Cryan JF, Dinan TG (2011) ‘BDNF expression in the hippocampus of maternally separated rats: does Bifidobacterium breve 6330 alter BDNF levels?’. Beneficial microbes, 2 (3):199–207. • O’Tuathaigh CM, Clarke G, Walsh J, Desbonnet L, Petit E, O’Leary C, Tighe O, Clarke N, Karayiorgou M, Gogos JA, Dinan TG, Cryan JF, Waddington JL (2011) ‘Genetic vs. pharmacological inactivation of COMT influences cannabinoid-induced expression of schizophrenia-related phenotypes’. International Journal of Neuropsychopharmacology, :1–12. • Savignac HM, Finger BC, Pizzo RC, O’Leary OF, Dinan TG, Cryan JF; (2011) ‘Increased sensitivity to the effects of chronic social defeat stress in an innately anxious mouse strain’. Neuroscience, 192:524–536. • Tramullas M, Dinan TG, Cryan JF (2011) ‘Chronic psychosocial stress induces visceral hyperalgesia in mice’. Stress (Amsterdam, Netherlands).

Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health xcv

• Felice D, O’Leary OF, Pizzo RC, Cryan JF; (2011) Adult hippocampal neurogenesis is increased by a GABAB receptor antagonist: Relevance to antidepressant action. Neuropharmacology Conference, Virginia, USA, November 10–11. • O’Leary OF, Savignac HM, Felice D., Bettler B., Cryan JF; (2011) GABAB(1) receptor isoforms confer differential susceptibility to the effects of social defeat stress. Anxiety and Depression, 21st Neuropharmacology Conference, Virginia, USA. • O’Leary OF, Zandy S, Dinan TG and Cryan JF; (2011) Increased hippocampal cell proliferation as a molecular mechanism for the therapeutic efﬁcacy of adjunctive lithium therapy in treatment-resistant depression. The International College of Neuropsychopharmacology (CINP) thematic meeting: Polypharmacy: The Good, The Bad and The Ugly, Salzburg, Austria. • O’Leary OF, Zandy S, Dinan TG, Cryan JF; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases adult hippocampal neurogenesis in a mouse model of treatment resistance. Anxiety and Depression, 21st Neuropharmacology Conference, Virginia, USA. • O’Leary OF, Zandy S, Dinan TG, and Cryan JF ; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases hippocampal neurogenesis in a model of treatment-resistant depression. European Behavioural Pharmacology society, Amsterdam.

• O’Leary OF, Zandy S, Dinan TG, and Cryan JF; (2011) Increased hippocampal cell proliferation as a molecular mechanism for the therapeutic efﬁcacy of adjunctive lithium therapy in treatment-resistant depression. Wiring the brain: Making connections, Wicklow, Ireland.

• O’Mahony E, O’Leary OF, McKernan DP, O’Malley D, Dinan TG and Cryan JF ; (2011) Investigation of glycogen synthase kinase-3 as a biomarker of schizophrenia and early-life stress. Health Research Board Watts Medal Competition. • O’Malley, D; Quigley, EM; Cryan, JF; Dinan, TG (2011) Plasma derived from patients with irritable bowel syndrome excites rat submucosal neurons via IL-6 and CRFR1 dependent mechanisms. DDW, Chicago.

Dempsey, Eugene

Book Chapters • Dempsey, EM ; (2011) ‘Cerebral Metabolism in the preterm infant’ In: Handbook of Growth and Growth monitoring in Health and Disease. New York: Springer.

• Hawkes CP, Bourke JF, Fitzgibbon J, Dempsey EM.; (2011) ‘Adisappearing neonatal skin lesion’. European Journal of Paediatrics. • Hawkes, C. P.,Dempsey, E. M.,Ryan, C. A.; (2011) ‘The Neopuff’s PEEP valve is ﬂow sensitive’. Acta Paediatr, 100 (33):360–3360.

• Hawkes, C. P.,Hanotin, S.,O’Flaherty, B.,Woodworth, S.,Ryan, C. A.,Dempsey, E. M. (2011) ‘Using smart phone technology to teach neonatal endotracheal intubation (NeoTube): application development and uptake’. Acta Paediatr. • Nadeem, M.,Murray, D. M.,Boylan, G. B.,Dempsey, E. M.,Ryan, C. A.; (2011) ‘Early blood glucose proﬁle and neurodevelopmental outcome at two years in neonatal hypoxic-ischaemic encephalopathy’. BMC Pediatr, 11.

• Colin P. Hawkes, Eugene M. Dempsey, C. Anthony Ryan; (2011) The Neopuff’s PEEP Valve Is More Sensitive at Lower Rates of Gas Flow. Pediatric Academic Society Meeting. • Colin P. Hawkes, Stefan Hanotin, Brian O’Flaherty, Simon Woodworth, C. Anthony Ryan, Eugene M. Dempsey; (2011) The iApproach to Teaching Neonatal Intubation: Co-Design of a Medical Procedural iPhone App. Pediatric Academic Society Meeting. • Correlatio Scott D. McCauley, Evonne Low, Colin P. Hawkes, Brian H. Walsh, Geraldine B. Boylan, Eugene M. Dempsey.; (2011) Correlation of Cardiac Output with Cerebral Oxygenation in Sick Preterm Infants during the Transitional Period. Pediatric Academic Society Meeting. • Jan Sirc, Eugene M. Dempsey, Jan Miletin; (2011) Comparison of Cerebral Tissue Oxygenation Index and Cardiac Output in Infants with Birth Weight Less Than 1250 Grams. Pediatric Academic Society Meeting.

• Jan Sirc, Eugene M. Dempsey, Jan Miletin; (2011) Doppler-Derived Diastolic Ventricular Function in Infants with Birth Weight Less Than during First 48 Hours. Pediatric Academic Society Meeting.

• Johannes B. Letshwiti, Katerina Pichova, Eugene M. Dempsey, Jan Miletin; (2011) Conservative Approach to Patent Ductus Arteriosus Management in Very Low Birth Weight Infants (VLBW) Pediatric Academic Society Meeting.

Dinan, Ted

• Browne CA, Clarke G, Dinan TG, Cryan JF; (2011) ‘Differential stress-induced alterations in tryptophan hydroxylase activity and serotonin turnover in two inbred mouse strains’. Neuropharmacology, 60 (4):683–691. • Claesson, M. J.,Cusack, S.,O’Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, A.P.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O’Connor, M.,Harnedy, N.,O’Connor, K.,Henry, C.,O’Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O’Toole, P. W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings of The National Acadamy of Sciences, 108 Suppl 1:4586–914586.

• Dinan TG, Quigley EM (2011) ‘Probiotics in the treatment of depression: science or science ﬁction?’. The Australian and New Zealand Journal of Psychiatry, 45 (12):1023–1025. • Finger BC, Dinan TG, Cryan JF (2011) ‘Behavioral satiety sequence in a genetic mouse model of obesity: effects of ghrelin receptor ligands’. Behavioural Pharmacology, 22 (7):624–632. • Finger, BC,Dinan, TG,Cryan, JF (2011) ‘High-Fat Diet Selectively Protects Against The Effects Of Chronic Social Stress In The Mouse’. Neuroscience, 192:351–360. • Finger, BC,Dinan, TG,Cryan, JF; (2011) ‘Behavioral satiety sequence in a genetic mouse model of obesity: effects of ghrelin receptor ligands’. Behavioural Pharmacology, 22:624–632.

• Finger, BC,Schellekens, H,Dinan, TG,Cryan, JF; (2011) ‘Is there altered sensitivity to ghrelin-receptor ligands in leptin-deﬁcient mice?: importance of satiety state and time of day’. Psychopharmacology, 216:421–429.

• Julio-Pieper M, Flor PJ, Dinan TG, Cryan JF; (2011) ‘Exciting Times beyond the Brain: Metabotropic Glutamate Receptors in Peripheral and Non-Neural Tissues’. Pharmacological reviews. • Kennedy, P.J., G. Clarke, G., Quigley, E.M.M., Groeger., J.A., Dinan., T.G., Cryan. J.F. ; (2011) ‘Gut Memories: Towards a Cognitive Neurobiology of Irritable Bowel Syndrome’. Neuroscience and Biobehavioral Reviews. • McKernan, DP,Gaszner, G,Quigley, EM,Cryan, JF,Dinan, TG; (2011) ‘Altered peripheral toll-like receptor responses in the irritable bowel syndrome’. Alimentary Pharmacology & Therapeutics, 33:1045–1052. • O’Brien FE, Dinan TG, Griffin BT, Cryan JF; (2011) ‘Interactions between antidepressants and P-glycoprotein at the blood-brain barrier: Clinical significance of in vitro and in vivo findings’. British Journal of Pharmacology.

• O’Mahony, CM,Clarke, G,Gibney, S,Dinan, TG,Cryan, JF; (2011) ‘Strain differences in the neurochemical response to chronic restraint stress in the rat: Relevance to depression’. Chemistry (Weinheim An Der Bergstrasse, Germany), 97:690–699.

• O’Mahony, SM,Coelho, AM,Fitzgerald, P,Lee, K,Winchester, W,Dinan, TG,Cryan, JF; (2011) ‘The effects of gabapentin in two animal models of co-morbid anxiety and visceral hypersensitivity’. European Journal of Pharmacology, 667:169–174. • O’Malley, D,Dinan, TG,Cryan, JF; (2011) ‘Altered expression and secretion of colonic Interleukin-6 in a stress-sensitive animal model of brain-gut axis dysfunction’. The Journal of Immunology, 235:48–55. Return to President’s Report • O’Sullivan E, Barrett E, Grenham S, Fitzgerald P, Stanton C, Ross RP, Quigley EM, Cryan JF, Dinan TG (2011) ‘BDNF expression in the hippocampus of maternally separated rats: does Biﬁdobacterium breve 6330 alter BDNF levels?’. Beneﬁcial microbes, 2 (3):199–207. UCC Research Publications 2011–2012 | College of Medicine and Health xcviii

• O’Tuathaigh CM, Clarke G, Walsh J, Desbonnet L, Petit E, O’Leary C, Tighe O, Clarke N, Karayiorgou M, Gogos JA, Dinan TG, Cryan JF, Waddington JL (2011) ‘Genetic vs. pharmacological inactivation of COMT inﬂuences cannabinoid-induced expression of schizophrenia-related phenotypes’. International Journal of Neuropsychopharmacology, :1–12.

• Savignac HM, Finger BC, Pizzo RC, O’Leary OF, Dinan TG, Cryan JF; (2011) ‘Increased sensitivity to the effects of chronic social defeat stress in an innately anxious mouse strain’. Neuroscience, 192:524–536. • Savignac, HM,Finger, BC,Pizzo, RC,O’Leary, OF,Dinan, TG,Cryan, JF (2011) ‘Increased Sensitivity To The Effects Of Chronic Social Defeat Stress In An Innately Anxious Mouse Strain’. Neuroscience, 192:524–536. • Tramullas M, Dinan TG, Cryan JF (2011) ‘Chronic psychosocial stress induces visceral hyperalgesia in mice’. Stress (Amsterdam, Netherlands).

Dunn Galvin, Audrey

Book Chapters • DunnGalvin A; (2011) ‘Seminal paper in allergy with expert commentary’ In: Landmark papers in Allergy. UK: Oxford University Press. • DunnGalvin, A & Hourihane, J O’B. ; (2011) ‘Developmental aspects of HRQL in food related chronic disease’ In: The International Handbook of Behaviour, Diet and Nutrition ; Springer, US. US: Elsevier.

• DunnGalvin, Dubois, Hourihane. Living with food allergy: Implications for the individual. ; (2011) ‘The impact of food allergy on parents, children and teens: Cause for concern’ In: Risk management in food allergy. UK: John Wiley & Sons, Inc.

Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health xcix

Peer Reviewed Journals • Chalmers, P,Dunngalvin, A,Shorten, G; (2011) ‘Reﬂective ability and moral reasoning in ﬁnal year medical students: A semi-qualitative cohort study’. Medical Teacher, 33:281–289.

• DunnGalvin, A,Daly, D,Cullinane, C,Stenke, E,Keeton, D,Erlewyn-Lajeunesse, M,Roberts, GC,Lucas, J,Hourihane, JO; (2011) ‘Highly accurate prediction of food challenge outcome using routinely available clinical data’. Journal of Allergy and Clinical Immunology, 127:633–145. • Wassenberg, J,Cochard, MM,DunnGalvin, A,de Blok, BMJ,Hofer, M,Eigenmann, PA; (2011) ‘Validation of the French version of speciﬁc quality of life questionnaire for children with food allergy’. Revue Francaise D Allergologie, 51:437–438.

Eustace, Joe

Peer Reviewed Journals • Neary, P. M. and O’Leary, P. and Hallihan, P. and McCourt, M. and O’Riordain, M. G. and Kirwan, W. O. and O’Boyle, C. and Gough, D. and Andrews, E. and Eustace, J. A. and Ryan, K. and Wang, J. H. and Redmond, H. P. (2011) ‘The peri-operative role of the anti-neoplastic agent taurolidine in colon cancer: A prospective multicenter randomised clinical trial’. British Journal of Surgery, 98:37–37. • O’Cathail, S. M. and O’Connell, O. J. and Long, N. and Morgan, M. and Eustace, J. A. and Plant, B. J. and Hourihane, J. O’ B. (2011) ‘Association of cigarette smoking with drug use and risk taking behaviour in Irish teenagers’. Addictive Behaviors, 36 (5):547–550. • O’Connell, Oisin J. and O’Farrell, Carmel and Harrison, Mike J. and Eustace, Joseph A. and Henry, Michael T. and Plant, Barry J. (2011) ‘Nebulized Hypertonic Saline Via Positive Expiratory Pressure Versus Via Jet Nebulizer in Patients With Severe Cystic Fibrosis’. Respiratory Care, 56 (6):771–775.

Fanning, Liam

Peer Reviewed Journals • Liam J. Fanning; (2011) ‘Retroviruses: Molecular Biology, Genomics and Pathogenesis’. Clinical infectious diseases: an ofﬁcial publication of the Infectious Diseases Society of America, 52 (2).

Fitzgerald, Tony

Book Chapters • Arensman, E., Corcoran, P.,Fitzgerald, A. P. ; (2011) ‘Deliberate Self-Harm: Extent of the Problem and Prediction of Repetition’ In: O’Connor, R.C., Platt, S., Gordon, J (Eds.). International Handbook of Suicide Prevention: Research, Policy and Practice. Chichester, UK: John Wiley & Sons, Ltd.

Peer Reviewed Journals

Return to • Cashman KD, Fitzgerald AP, Viljakainen HT, Jakobsen J, Michaelsen KF, Lamberg-Allardt C, Mlgaard C; (2011) ‘Estimation of the dietary President’s Report requirement for vitamin D in healthy adolescent white girls’. The American Journal of Clinical Nutrition, 93 (3):549–555. UCC Research Publications 2011–2012 | College of Medicine and Health c

• Cashman, K. D.,Fitzgerald, A. P.,Kiely, M.,Seamans, K. M. (2011) ‘Asystematic review and meta-regression analysis of the vitamin D intake-serum 25-hydroxyvitamin D relationship to inform European recommendations’. British Journal of Nutrition. • Claesson, M. J.,Cusack, S.,O’Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, A.P.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O’Connor, M.,Harnedy, N.,O’Connor, K.,Henry, C.,O’Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O’Toole, P. W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings of The National Acadamy of Sciences, 108 Suppl 1:4586–914586.

• Dudina, A.,Cooney, M. T.,De Bacquer, D.,De Backer, G.,Ducimetiere, P.,Jousilahti, P.,Keil, U.,Menotti, A.,Njolstad, I.,Oganov, R.,Sans, S.,Thomsen, T.,Tverdal, A.,Wedel, H.,Whincup, P.,Wilhelmsen, L.,Conroy, R.,Fitzgerald, A.,Graham, I.; (2011) ‘Relationships between body mass index, cardiovascular mortality, and risk factors: a report from the SCORE investigators’. European Journal of Cardiovascular Prevention & Rehabilitation.

• Geaney, F; Harrington, J; Fitzgerald, AP; Perry, I; (2011) ‘The impact of a workplace catering initiative on dietary intakes of salt and other nutrients: a pilot study’. Public Health Nutrition, :1–5. • Harrington, J.,Fitzgerald, A. P.,Layte, R.,Lutomski, J.,Molcho, M.,Perry, I. J.; (2011) ‘Sociodemographic, health and lifestyle predictors of poor diets’. Public Health Nutrition, 14 (12):2166–2175. • Kulcsár, Zsuzsanna, Lövquist, Erik, Fitzgerald, Anthony P., Aboulaﬁa, Annette, Shorten, George D.; (2011) ‘Testing Haptic Sensations for Spinal Anesthesia’. Regional Anesthesia and Pain Medicine, 1. • Savage E, Beirne PV, Ni Chroinin M, Duff A, Fitzgerald AP ; (2011) ‘Self-management education for cystic ﬁbrosis’. Cochrane Database of Systematic Reviews, (1).

Conference Publications • Seamans, K. M.,Fitzgerald, A. P.,Kiely, M.,Cashman, K. D. (2011) Estimating dietary requirements for vitamin D: a systematic review of intake-status relationship to inform European recommendations. Joint Irish Section and American Society for Nutrition Meeting.

Geaney, Fiona

Greene, Richard

Peer Reviewed Journals • Lutomski JE, Byrne BM, Devane D, Greene RA; (2011) ‘Increasing trends in atonic postpartum haemorrhage in Ireland: An 11-year population-based cohort study’. BJOG: an international journal of obstetrics and gynaecology. Return to President’s Report • Lutomski, JE,Morrison, JJ,Greene, RA,Lydon-Rochelle, MT; (2011) ‘Maternal Morbidity During Hospitalization for Delivery’. Obstetrics and Gynecology, 117:596–602. UCC Research Publications 2011–2012 | College of Medicine and Health ci

• McNamara K, O’Donoghue K, O’Connell O and Greene RA; (2011) ‘Antenatal and Intrapartum Care of Pregnancy with lethal fetal anomaly’. The Obstetrician & Gynaecologist.

Harrington, Janas

Peer Reviewed Journals • Geaney, F; Harrington, J; Fitzgerald, AP; Perry, I; (2011) ‘The impact of a workplace catering initiative on dietary intakes of salt and other nutrients: a pilot study’. Public Health Nutrition, :1–5. • Harrington, J.,Fitzgerald, A. P.,Layte, R.,Lutomski, J.,Molcho, M.,Perry, I. J.; (2011) ‘Sociodemographic, health and lifestyle predictors of poor diets’. Public Health Nutrition, 14 (12):2166–2175. • Layte R, Harrington J, Sexton E, Perry IJ, Cullinan J, Lyons S; (2011) ‘Irish exceptionalism? local food environments and dietary quality’. Jnl. Epidemiology & Community Health, 65 (10):881–888.

• Lutomski JE, J van den Broeck, J Harrington, F Shiely, IJ Perry; (2011) ‘Sociodemographic, lifestyle, mental health and dietary factors associated with direction of misreporting of energy intake’. Public Health Nutrition, :1–10.

Harrison, Patrick

Peer Reviewed Journals • Landin, Ana Marie,Frasca, Daniela,Harrison, Patrick,Scallan, Martina,Riley, Richard L.,Blomberg, Bonnie B.; (2011) ‘E47 retroviral rescue of intrinsic B cell defects in senescent mice’. Aging Cell.

Hourihane, Jonathan

Book Chapters • Cox, H; Hourihane, JOB (2011) ‘Eczema and Food Allergy’ In: Irvine, AD; Hoefer, PH; Yan, AC (Eds.). Harper’s Textbook of Paediatric Dermatology. Oxford: Blackwell.

• DunnGalvin, A & Hourihane, J O’B. ; (2011) ‘Developmental aspects of HRQL in food related chronic disease’ In: The International Handbook of Behaviour, Diet and Nutrition ; Springer, US. US: Elsevier. • Hourihane, JOB (2011) ‘Approach to the Clinical Diagnosis of Food Allergy’ In: James JM, Burks AW, Eigenmann PA (Eds.). Food Allergy: Practical Clinical Approaches to Diagnosis and Management. Elsevier: Elsevier.

Peer Reviewed Journals • Brown, SJ,Asai, Y,Cordell, HJ,Campbell, LE,Zhao, YW,Liao, HH,Northstone, K,Henderson, J,Alizadehfar, R,Ben-Shoshan, M,Morgan, K,Roberts, Return to G,Masthoff, LJN,Pasmans, SGMA,van den Akker, PC,Wijmenga, C,Hourihane, JO,Palmer, CNA,Lack, G,Clarke, A,Hull, PR,Irvine, AD,McLean, President’s Report WHI; (2011) ‘Loss-of-function variants in the ﬁlaggrin gene are a signiﬁcant risk factor for peanut allergy’. The Journal of Immunology, 127:661–667. UCC Research Publications 2011–2012 | College of Medicine and Health cii

• DunnGalvin, A,Daly, D,Cullinane, C,Stenke, E,Keeton, D,Erlewyn-Lajeunesse, M,Roberts, GC,Lucas, J,Hourihane, JO; (2011) ‘Highly accurate prediction of food challenge outcome using routinely available clinical data’. Journal of Allergy and Clinical Immunology, 127:633–145. • Hawkes, CP,Hourihane, JO,Kenny, LC,Irvine, AD,Kiely, M,Murray, DM (2011) ‘Gender- and Gestational Age-Speciﬁc Body Fat Percentage at Birth’. Pediatrics, 128:645–651. • Hourihane JO (2011) ‘Peanut allergy’. Pediatric clinics of North America, 58 (2):445–41.

• Hourihane, JO; (2011) ‘Peanut Allergy’. Clinics, 58. • O’Cathail, SM,O’Connell, OJ,Long, N,Morgan, M,Eustace, JA,Plant, BJ,Hourihane, JOB; (2011) ‘Association of cigarette smoking with drug use and risk taking behaviour in Irish teenagers’. Addictive Behaviors, 36:547–550. • van der Velde JL, Flokstra-de Blok BM, Dunngalvin A, Hourihane JO, Duiverman EJ, Dubois AE (2011) ‘Parents report better health-related quality of life for their food-allergic children than children themselves’. Clinical and experimental allergy: journal of the British Society for Allergy and Clinical Immunology, 41 (10):1431–1439.

Houston, Aileen

Peer Reviewed Journals • O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional genome analysis of Biﬁdobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222.

Hyland, Niall

Peer Reviewed Journals • Craig OF, Hyland NP and Quigley EMM; (2011) ‘Functional Dyspepsia — Another Red State! Eosinophils, Macrophages, and Postinfectious Dyspepsia’. Gastroenterology.

Hynes, Helen

Peer Reviewed Journals • Hynes H, Smith S, Henn P, McAdoo J (2011) ‘Fit for Practice: Are we there yet?’. Medical teacher. • Pat Henn, Simon Smith, Robert Gaffney, Helen Hynes; (2011) ‘Astudy of innovative patient safety education’. The Clinical Teacher.

• Simon Smith, Patrick Henn, Robert Gaffney, Helen Hynes, John McAdoo and Colin Bradley; (2011) ‘Patient safety: using end objectives to drive Return to learning’. Medical Education, 45 (7):757–757. President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health ciii

Conference Publications • Helen Hynes, Simon Smith, Pat Henn and Robert Gaffney; (2011) Reducing vulnerability to medical error. Engaging Minds: Active learning, participation and collaboration in Higher Education.

• Joy A, Hynes H, Ellaway R, Topps D, LaChapelle K (2011) Learning to collaborate remotely in real time through a platform of integrated simulation devices. Simulation Summit 2011 Montreal, Quebec, Canada, 2011–11–03- 2011–11–04.

Johns, Edward James

Peer Reviewed Journals • Abdulla, MH,Sattar, MA,Abdullah, NA,Khan, AH,Swarup, KRLA,Rathore, HA,Kazi, RN,Basri, F,Johns, EJ; (2011) ‘Effect of renal sympathetic nerve on adrenergically and angiotensin II-induced renal vasoconstriction in normal Wistar-Kyoto rats’. Rna-A Publication of The Rna Society, 116:18–25. • Abdulla, MH,Sattar, MA,Abdullah, NA,Khan, MAH,Swarup, KRLA,Johns, EJ; (2011) ‘The contribution of alpha(1B)-adrenoceptor subtype in the renal vasculature of fructose-fed Sprague-Dawley rats’. Journal of Nutrition, 50:251–260. • Houghton, BL,Johns, EJ; (2011) ‘The pressor and renal sympathetic nerve responses to vascular and spinal V-1 receptor activation after manipulation of dietary sodium intake’. Rna-A Publication of The Rna Society, 29:915–921.

• Kazi, RN,Sattar, MA,Abdullah, NA,Khan, MAH,Rathore, HA,Abdulla, MH,Salman, IM,Johns, EJ; (2011) ‘ASpecial Focus on the Role of alpha(1D)-Adrenoreceptors in the Assessment of Renal Tubular Sodium Re-absorptive Responses in Spontaneously Hypertensive Rats Subjected to High Sodium Diet’. Rna-A Publication of The Rna Society, 131:431–436. • Kazi, RN,Sattar, MA,Abdullah, NA,Rathore, HA,Kolla, AS,Hussain, NM,Abdulla, MH,Salman, IM,Khan, AH,Johns, EJ; (2011) ‘Inﬂuence of High Dietary Sodium Intake on Functional Contribution of Renal alpha 1 alpha-Adrenoceptor of SHR’.Advances In Clinical and Experimental Medicine, 20:47–56. • McCarthy FP, Drewlo S, Kingdom J, Johns EJ, Walsh SK, Kenny LC; (2011) ‘Peroxisome Proliferator-Activated Receptor-gamma as a Potential Therapeutic Target in the Treatment of Preeclampsia’. Hypertension, 58 (2):280–286.

• Salman, IM,Ameer, OZ,Sattar, MA,Abdullah, NA,Yam, MF,Abdullah, GZ,Abdulkarim, MF,Khan, MAH,Johns, EJ; (2011) ‘Renal Sympathetic Nervous System Hyperactivity in Early Streptozotocin-Induced Diabetic Kidney Disease’. Urology, 30:438–446.

• Salman, IM,Ameer, OZ,Sattar, MA,Abdullah, NA,Yam, MF,Najim, HS,Abdulkarim, MF,Abdullah, GZ,Kaur, G,Khan, MAH,Johns, EJ; (2011) ‘Characterization of renal hemodynamic and structural alterations in rat models of renal impairment: role of renal sympathoexcitation’. Journal of Nephrology, 24:68–77.

Joy, Aislinn

Conference Publications Return to • Aislinn Joy, Helen Hynes, Rachel Ellaway, David Topps, Kevin laChapelle (2011) Learning to Collaborate Remotely, in Real Time, Through a President’s Report Platform of Integrated Simulation Devices. Simulation Summit, Royal College of Physicians and Surgeons in Canada, Montreal, November 2011. UCC Research Publications 2011–2012 | College of Medicine and Health civ

• Joy, A;Sahm,L;Mathers,J;O‘Flynn,S;Kerins,D; (2011) Interprofessional ward-based teamwork to enable safe prescribing practice in healthcare undergraduates. ASME Annual Scientiﬁc Meeting 13–15 July, RCPE Edinburgh. • M Kelly, S O’Flynn, D Bennett, A Joy, M O’Rourke; (2011) Does professionalism decline over the course of medical education? Professionalism proﬁling using quantitative tools in an integrated medical curriculum. AMEE 2011 Vienna. • R Ellaway, D Topps, K LaChapelle, A Joy ; (2011) Exploring Simulation Integration. 11th Annual International Meeting on Simulation in Healthcare. New Orleans, LA: 23–26 January, 2011.

Kearney, Patricia

Peer Reviewed Journals • Cronin EM, Kearney PM, Kearney PP, Sullivan P, Perry IJ (2011) ‘Impact of a National Smoking Ban on Hospital Admission for Acute Coronary Syndromes: A Longitudinal Study’. Clinical Cardiology. • Emberson J, Kearney PM, L Blackwell, C Newman, C Reith, N Bhala, L Holland, R Peto, A Keech, R Collins , J Simes, C Baigent ( equal contribution), (2011) ‘Lack of effect of lowering LDL cholesterol on cancer: meta-analysis of individual data from 175,000 people in 27 randomised trials of statin therapy’. PloS ONE. • Kearney PM, Cronin H, O’Regan C, Kamiya Y, Whelan BJ, Kenny RA; (2011) ‘Comparison of centre and home-based health assessments: early experience from the Irish Longitudinal Study on Ageing (TILDA)’.Age and Ageing, 40 (1):85–90. • Kearney PM, O’Regan C, Cronin H, Kenny RA (2011) ‘Effect of fasting on participation in clinical research among older people’. European Geriatric Medicine. • Kearney, PM,Cronin, H,O’Regan, C,Kamiya, Y,Savva, GM,Whelan, B,Kenny, R; (2011) ‘Cohort Proﬁle: The Irish Longitudinal Study on Ageing’. International Journal of Epidemiology, 40:877–884.

Kelly, Martina Ann

Conference Publications • Kelly M, Bennett, D., O’ Flynn, S; (2011) General Practice, The DREEM attachment? Academic Units and Departments of General Practice Ireland AUDPI Dublin Jan 2011.

• Kelly M, Foley, T, O’Flynn S; (2011) Teamwork promotes Patient Centredness. Evaluation of a Primary Care Team placement. Academic Units and Departments of General Practice Ireland AUDPI Dublin Jan 2011. • Kelly, M; Bennett, D;O‘Flynn, S; Dornan, T; (2011) Clinical workplace learning — how to evaluate. AMEE Annual Scientiﬁc Meeting Vienna.

• O’Rourke, M; Hammond, S; Kelly, M; Bennett, D & O’Flynn, S ; (2011) Psychometric Properties of DREEM. Irish Network of Medical Educators Annual Scientiﬁc Meeting May 2011 Trinity College Dublin.

Kenny, Louise

Book Chapters • Ofﬁah I, O’Donoghue K and Kenny LC; (2011) ‘Clinical Risk Factors for Preterm Birth’ In: Preterm Birth. Croatia: InTech.

• Hawkes CP, Hourihane JO, Kenny LC, Irvine AD, Kiely M, Murray DM; (2011) ‘Gender- and Gestational Age-Speciﬁc Body Fat Percentage at Birth’. Pediatrics. • Horgan RP, Broadhurst DI, Walsh SK, Dunn WB, Brown M, Roberts CT, North RA, McCowan LM, Kell DB, Baker PN, Kenny LC; (2011) ‘Metabolic proﬁling uncovers a phenotypic signature of small for gestational age in early pregnancy’. Journal of Proteome Research, 10 (8):3660–3673. • Khashan AS, Kenny LC, Laursen TM, Mahmood U, Mortensen PB, Henriksen TB, O’Donoghue K; (2011) ‘Pregnancy and the risk of autoimmune disease’. Plos One, 6 (5). • Khashan AS, Kenny LC; (2011) ‘Re: Narchi H, Skinner A. 2010. Overweight and obesity in pregnancy do not adversely affect neonatal outcomes: new evidence. Journal of Obstetrics and Gynaecology 30:679–686’. Journal of Obstetrics and Gynaecology, 31 (4):1–3.

• Khashan AS, McNamee R, Henriksen TB, Pedersen MG, Kenny LC, Abel KM, Mortensen PB; (2011) ‘Risk of affective disorders following prenatal exposure to severe life events: A Danish population-based cohort study’. Journal of Psychiatric Research.

• McCarthy FP, Drewlo S, English FA, Kingdom J, Johns EJ, Kenny LC, Walsh SK (2011) ‘Evidence implicating peroxisome proliferator-activated receptor-Î3 in the pathogenesis of preeclampsia’. Hypertension, 58 (5):882–887. • McCarthy FP, Drewlo S, Kingdom J, Johns EJ, Walsh SK, Kenny LC; (2011) ‘Peroxisome Proliferator-Activated Receptor-gamma as a Potential Return to Therapeutic Target in the Treatment of Preeclampsia’. Hypertension, 58 (2):280–286. President’s Report • McCarthy FP, Kingdom JC, Kenny LC, Walsh SK; (2011) ‘Animalmodels of preeclampsia; uses and limitations’. Placenta, 32 (6):413–419. UCC Research Publications 2011–2012 | College of Medicine and Health cvi

• North RA, McCowan LM, Dekker GA, Poston L, Chan EH, Stewart AW, Black MA, Taylor RS, Walker JJ, Baker PN, Kenny LC; (2011) ‘Clinical risk prediction for pre-eclampsia in nulliparous women: development of model in international prospective cohort’. BMJ (Clinical Research Ed.), 342.

Conference Publications • Murphy NM, Broadhurst D, Gilligan O,Jabarudin WNE, Khashan A, Kenny LC and O’Donoghue K ; (2011) Cross-sectional study to identify ranges of D-Dimers in pregnancy. Society for Maternal and Fetal Medicine Annual Meeting. • Murphy NM, Broadhurst D, Gilligan O,Jabarudin WNE, Khashan A, O’Donoghue K and Kenny LC; (2011) Establishing Reference Ranges for D-dimers in Normal Pregnancy. Society for Gynecological Investigation Annual Meeting.

Keohane, Catherine

Peer Reviewed Journals • Guerin M, Droney T, Keohane C, Fenton S (2011) ‘Eccrine syringoﬁbroadenoma of the eyelid in association with eye prosthesis’. Eye (London, England), 25 (8):1102–1103. • Haroon M, Bermingham N, Keohane C, Harney S (2011) ‘Polyarteritis nodosa presenting with clinical and radiologic features suggestive of polymyositis’. Rheumatology International. • Haroon, M.,Bermingham, N.,Keohane, C.,Harney, S. (2011) ‘Polyarteritis nodosa presenting with clinical and radiologic features suggestive of polymyositis’. Rheumatol Int. • Jansen M, Mohapatra G, Betensky RA, Keohane C, Louis DN (2011) ‘Gain of chromosome arm 1q in atypical meningioma correlates with shorter progression-free survival’. Neuropathology and Applied Neurobiology.

Kumar, Arun

Book Chapters • Arun HS Kumar and Naresh Kumar Singh; (2011) ‘Compromised cytology of bovine udder during mastitis: Therapeutic potential of adult stem/progenitor cells’ In: Neelesh Sharma, Naresh Kumar Singh and Goran Bacic (Eds.). Production diseases of dairy animals. Delhi, India: Satish Serial Publishing House, Delhi, India.

Peer Reviewed Journals • A.J.P. Clover, Arun HS Kumar and Noel M Caplice (2011) ‘Monocyte recruitment via the CX3CR1 receptor inﬂuences burn wound healing’. British Journal of Surgery, 98 (52 BP5). • A.J.P. Clover, B. Lane O’Neill and Arun HS Kumar. (2011) ‘Analysisof public attitudes towards the use of autologous and allogenic cells in tissue engineering products for burns’. British Journal of Surgery, 98 (52 BP6).

Return to • Brian Hynes, Arun HS Kumar, John O’Sullivan, Chirlei Klein Buneker, Anne-Laure Leblond, Sharon Weiss, Jeffrey Schmeckpeper, Kenneth Martin, President’s Report Noel M Caplice; (2011) ‘Potent EPC conditioned media related anti-apoptotic, cardiotrophic and proangiogenic effects post myocardial infarction are mediated by IGF-1’. European Heart Journal. UCC Research Publications 2011–2012 | College of Medicine and Health cvii

• Clover AJ, Kumar AH, Caplice NM; (2011) ‘Deﬁciency of CX3CR1 delays burn wound healing and is associated with reduced myeloid cell recruitment and decreased sub-dermal angiogenesis’. Burns: journal of the International Society for Burn Injuries. • Kumar AH, McCauley SD, Hynes BG, O’Dea J, Caplice NM; (2011) ‘Improved protocol for processing stented porcine coronary arteries for immunostaining’. Journal of Molecular Histology, 42 (2):187–193. • Metharom P, Martin K, Kumar AH, Sawhney N, Cronin MF, McCarthy DG, Maguire AR, Caplice NM; (2011) ‘Pleiotropic role for monocyte C-fms protein in response to vascular injury: Potential therapeutic target’. Atherosclerosis, 216 (1):74–82.

Conference Publications • Arun HS Kumar, Kenneth Martin, Noel M Caplice (2011) Deﬁciency of CX3CR1 Receptors Results in Formation of Leaky Microvessels in Plaque. Atherosclerosis Thrombosis and Vascular Biology Conference. 28th-30th April 2011. Hilton, Chicago, Illinois, USA. (Abstract #220). • John F O’Sullivan, M.D., Anne-Laure Leblond, PhD, Geraldine Kelly, BSc, Arun HS Kumar DVM, PhD, Pat Metharom, PhD, Chirlei K Büneker, PhD, Niki Alizadeh-Vikali, MSc, BHSc, Ivalina Hristova, BS, Brian G Hynes, M.D., Rosemary O’Connor, PhD, Noel M Caplice, (2011) Potent Long-term Cardioprotective Effects of Single Low Dose Insulin-like Growth Factor-1 (LD-IGF-1) Treatment Post Myocardial Infarction. Irish Cardiac Society, Winner YIA.

• Pat Metharom, Kenneth Martin, Arun HS Kumar, Noel M Caplice. (2011) Pleiotropic Role for Monocyte C–fms Protein in Response to Vascular Injury: Potential Therapeutic Target. Atherosclerosis Thrombosis and Vascular Biology Conference, 28th–30th April 2011. Hilton, Chicago, Illinois,USA.

Mackrill, John

Peer Reviewed Journals • Mackrill. J.; (2011) ‘Oxysterols and calcium signal transduction’.

Maher, Michael

Peer Reviewed Journals

Return to • Crush L, O’Connor OJ, Plant W, Clarkson MR, Shanahan F, Maher MM; (2011) ‘Perplexing plain abdominal x-ray’. Gut, 60 (2). President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cviii

• Hegarty D, O’Connor OJ, Moore M, O’Regan KN, Shorten G, Maher MM; (2011) ‘Association between preoperative magnetic resonance imaging, pain intensity and quantitative sensory testing in patients awaiting lumbar diskectomy’. Journal of Medical Imaging and Radiation Oncology, 55 (1):4–10.

• Leong, S,O’Connor, OJ,Doyle, D,Murphy, DM,Maher, MM; (2011) ‘Increased Fluoro-deoxy-D-glucose Uptake on Positron Emission Tomography-Computed Tomography Postbronchoalveolar Lavage A Potential Cause of Radiologic Misinterpretation’. Rna-A Publication of The Rna Society, 26:89–91.

• McLaughlin P, McGarrigle AM, Maher MM; (2011) ‘Comparison of handheld devices for emergency radiology’. American Journal of Roentgenology, 196 (4). • O’Connor OJ, Maher MM; (2011) ‘Imaging of cholecystitis’. American Journal of Roentgenology, 196 (4):1–74. • O’Donoghue K, O’Regan KN, Sheridan CP, O’Connor OJ, Benson J, McWilliams S, Moore N, Murphy MJ, Chopra R, Higgins JR, Maher MM.; (2011) ‘Investigation of the role of computed tomography as an adjunct to autopsy in the evaluation of stillbirth’. European Journal of Radiology.

• O’Neill SB, Maher MM, O’Reilly S; (2011) ‘Tailored Diagnostics: A Proposal’. Journal of Clinical Oncology. • O’Neill SB, O’Connor OJ, McWilliams SR, Shanahan F, Maher MM; (2011) ‘Minimization of radiation exposure due to computed tomography in inﬂammatory bowel disease’. Clinics and research in hepatology and gastroenterology. • Wu CC, Maher MM, Shepard JA; (2011) ‘CT-guided percutaneous needle biopsy of the chest: preprocedural evaluation and technique’. American Journal of Roentgenology, 196 (5):1–4.

• Wu CC, Maher MM, Shepard JA; (2011) ‘Complications of CT-Guided Percutaneous Needle Biopsy of the Chest: Prevention and Management’. American Journal of Roentgenology, 196 (6):1–82.

Mccarthy, Vera

Conference Publications • Mc Carthy Vera JC, Perry IJ, Greiner BA; (2011) Are older workers more susceptible to job strain? A case-control study on cardiovascular disease comparing older and younger workers. Society for Social Medicine Annual Scientiﬁc Meeting,, Warwick University, England, 2011–09–14- 2011–09–16.

Mcnamara, Brian

Peer Reviewed Journals • Dineen J, Saidha S, McNamara B, Plant B, Ryan AM (2011) ‘Brachial neuritis masquerading as acute coronary syndrome’. Irish Journal of Medical Science, 180 (1):291–294.

Return to • Lefter S, Costello DJ, McNamara B, Sweeney B (2011) ‘Clinical and EEG features of seizures in adults with down syndrome’. Journal of clinical President’s Report neurophysiology: ofﬁcial publication of the American Electroencephalographic Society, 28 (5):469–473. UCC Research Publications 2011–2012 | College of Medicine and Health cix

• Merwick A, Cooke J, Neligan A, McNamara B, Sweeney BJ (2011) ‘Acute neuropathy in setting of diarrhoeal illness and hyponatraemia due to lithium toxicity’. Clinical neurology and neurosurgery, 113 (10):923–924. • O’Toole O, Lefter S, McNamara B (2011) ‘EEG use in a tertiary referral centre’. Irish Medical Journal, 104 (7):202–204.

• Romics, L,McNamara, B,Cronin, PA,O’Brien, ME,Relihan, N,Redmond, HP; (2011) ‘Unusual paraneoplastic syndromes of breast carcinoma: a combination of cerebellar degeneration and Lambert-Eaton Myasthenic Syndrome’. Rna-A Publication of The Rna Society, 180:569–571.

Moore, Anne

Peer Reviewed Journals • Carey, JB,Pearson, FE,Vrdoljak, A,McGrath, MG,Crean, AM,Walsh, PT,Doody, T,O’Mahony, C,Hill, AVS,Moore, AC; (2011) ‘Microneedle Array Design Determines the Induction of Protective Memory CD8(+) T Cell Responses Induced by a Recombinant Live Malaria Vaccine in Mice’. Plos One, 6.

• Galvin P, Thompson D, Ryan KB, McCarthy A, Moore AC, Burke CS, Dyson M, Maccraith BD, Gun’ko YK, Byrne MT, Volkov Y, Keely C, Keehan E, Howe M, Duffy C, Macloughlin R (2011) ‘Nanoparticle-based drug delivery: case studies for cancer and cardiovascular applications’. Cellular and molecular life sciences: CMLS.

Conference Publications • John B. Carey, Frances E. Pearson, Anto Vrdoljak, Abina M. Crean, Conor O’Mahony, Adrian V.S. Hill, Anne C. Moore; (2011) Immunization using ImmuPatch Silicon Microneedle Arrays results in Enhanced T-cell and antibody responses compared to traditional immunization routes. 38th Annual Meeting Controlled Release Society National Harbor, Maryland, U.S.A. • M.G. McGrath, C.O’Mahony, A. Vrdoljak, A.C. Moore, A.M. Crean; (2011) Design of Dissolvable Microneedles for Drug Delivery. 38th Annual Meeting Controlled Release Society National Harbor, Maryland, U.S.A.

Moran, Joseph

Peer Reviewed Journals • Cornally N, Deasy EA, Moran J, McCarthy G (2011) ‘Student nurses intentions to get the Inﬂuenza Vaccine: An application of the theory of planned behaviour’. British Journal of Nursing. • Deasy EA, Cornally N, Moran J. (2011) ‘Medical and Nursing student’s intention to get the inﬂuenza vaccine: An application of the theory of planned behaviour’. Irish Medical Journal.

Return to • m kelly, k o’sullivan, p ﬁnegan, j moran, c bradley (2011) ‘Assisted Admissions? A national Survay of General Practitioner Experience of Involuntary President’s Report admissions’. Irish Medical Journal, 104 (9):273–275. UCC Research Publications 2011–2012 | College of Medicine and Health cx

Other Journals • McCarthy G, Cornally N, Moran J. (2011) ‘General Practitioners Perspectives on the Role of the Practice Nurse in Ireland’. Forum, Journal of the Irish College of General Practitioners.

Murray, Deirdre

Peer Reviewed Journals • Hawkes CP, Hourihane JO, Kenny LC, Irvine AD, Kiely M, Murray DM; (2011) ‘Gender- and Gestational Age-Speciﬁc Body Fat Percentage at Birth’. Pediatrics.

• Korotchikova I, Stevenson NJ, Walsh BH, Murray DM, Boylan GB; (2011) ‘Quantitative EEG analysis in neonatal hypoxic ischaemic encephalopathy’. Clinical Neurophysiology. • Korotchikova, I,Stevenson, NJ,Walsh, BH,Murray, DM,Boylan, GB; (2011) ‘Quantitative EEG analysis in neonatal hypoxic ischaemic encephalopathy’. Clinical Neurophysiology, 122:1671–1678. • Nadeem M, Murray DM, Boylan GB, Dempsey EM, Ryan CA; (2011) ‘Early blood glucose proﬁle and neurodevelopmental outcome at two years in neonatal hypoxic-ischaemic encephalopathy’. BMC Pediatrics, 11.

• Walsh BH, Boylan GB, Murray DM; (2011) ‘Nucleated Red Blood Cells and early EEG: Predicting Sarnat stage and two year outcome’. Early Human Development.

• Walsh, BH,Low, E,Bogue, CO,Murray, DM,Boylan, GB; (2011) ‘Early continuous video electroencephalography in neonatal stroke’. Development (Cambridge, England), 53:89–92.

Muttukrishna, Shanthi

Peer Reviewed Journals • Almog, B,Shehata, F,Suissa, S,Holzer, H,Shalom-Paz, E,La Marca, A,Muttukrishna, S,Blazar, A,Hackett, R,Nelson, SM,Cunha, JS,Eldar-Geva, T,Margalioth, EJ,Raine-Fenning, N,Jayaprakasan, K,McIlveen, M,Wunder, D,Freour, T,Nardo, LG,Balasch, J,Penarrubia, J,Smeenk, J,Gnoth, C,Godehardt, E,Lee, TH,Lee, MS,Levin, I,Gamzu, R,Tulandi, T; (2011) ‘Age-related normograms of serum antimullerian hormone levels in a population of infertile women: a multicenter study’. Fertility and Sterility, 95:2359–280. • Evans P, Cindrova-Davies T, Muttukrishna S, Burton GJ, Porter J, Jauniaux E; (2011) ‘Hepcidin and iron species distribution inside the First Trimester Human Gestational Sac’. Molecular Human Reproduction, 17 (4):227–232.

• Mihm, M; Gangooly, S; Muttukrishna, S; (2011) ‘The normal menstrual cycle in women’. Reproductive Sciences, 124 (3–4):229–236. • Muttukrishna, S,Swer, M,Suri, S,Jamil, A,Calleja-Agius, J,Gangooly, S,Ludlow, H,Jurkovic, D,Jauniaux, E; (2011) ‘Soluble Flt-1 and PlGF: New Markers of Early Pregnancy Loss?’. Plos One, 6. Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxi

Nolan, Yvonne

Book Chapters • Collins L.M., Toulouse A., Nolan Y.M.; (2011) ‘Inﬂammation in Parkinson’s disease: causes and consequences’ In: Juliana Dushanova (Eds.). Mechanisms in Parkinson’s Disease — Models and Treatments. Croatia: InTech. • Miller A-M, Deighan B, Nolan Y, Lynch MA; (2011) ‘Analysisof the impact of CD200 on neurodegenerative diseases’ In: Neurodegenerative Diseases. Croatia: InTech Open Access Publisher.

Peer Reviewed Journals • Nolan AM, Nolan YM, O’Keeffe GW; (2011) ‘IL-1β inhibits axonal growth of developing sympathetic neurons’. Molecular and Cellular Neuroscience, 48 (2):142–150. • Ryan, S,O’Gorman, DM,Nolan, YM; (2011) ‘Evidence that the Marine-derived Multi-mineral Aquamin has Anti-inﬂammatory Effects on Cortical Glial-enriched Cultures’. Phytotherapy Research, 25:765–767.

Conference Publications • Collins L.M., Toulouse A., Nolan Y.M. (2011) Mitogen-activated protein kinase phosphatase-1 (MKP-1) expression in 6-hydroxydopamine-treated embryonic rat mesencephalic neural precursor cells. 41st Annual Meeting of the Society for Neuroscience Washington DC, 2011–11–12- 2011–11–16.

• Collins L.M., Toulouse A., Nolan Y.M.; (2011) Effect of 6-hydroxydopamine on MKP-1 expression in differentiated embryonic rat ventral mesencephalic neural precursor cells. 8th IBRO World Congress of Neuroscience, Florence, Italy, 2011–07–14- 2011–07–18. • Green HF, Nolan YM (2011) The effect of IL-1beta on embryonic rat hippocampal neural progenitor cell differentiation: role of GSK3beta, 4th Annual Neuroscience Ireland Conference University College Dublin, 2010–09–02- 2010–09–03. • O’Brien I.S., Sullivan A.M., Nolan Y.M., Toulouse A.; (2011) Expression of the 2F7 epitope in the rat embryo, and adult brain. 8th IBRO World Congress of Neuroscience, Florence, Italy, 2011–07–14- 2011–07–18. • Ryan S, Nolan YM (2011) Effect of Interleukin-1beta on expression of the orphan nuclear receptor TLX in adult rat hippocampal neural precursor cells. 4th Annual Neuroscience Ireland Conference UCD, 2010–09–02- 2010–09–03.

• Ryan S, Nolan YM (2011) IL-1beta negatively regulates expression of the orphan nuclear receptor TLX in adult rat hippocampal neural precursor cells in a dose-dependent manner. 8th IBRO World Congress of Neuroscience, Florence, Italy, 2011–07–14- 2011–07–18.

• Ryan S, Nolan YM (2011) The role of the orphan nuclear receptor TLX in IL-1beta-induced changes in proliferation of adult rat hippocampal neural precursor cells in vitro. The Physiological Society, Cellular and Integrative Neuroscience London, UK, 2011–04–06- 2011–04–08.

Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxii

O’Donoghue, Keelin

Book Chapters • O’Donoghue, K.; (2011) ‘Medical Disorders in Pregnancy’ In: Obstetrics for Ten Teachers. London: Hodder and Stoughton Ltd. • O’Donoghue, K.; (2011) ‘Physiological changes in Pregnancy’ In: Obstetrics for Ten Teachers. London: Hodder and Stoughton Ltd. • Ofﬁah I, O’Donoghue K and Kenny LC; (2011) ‘Clinical Risk Factors for Preterm Birth’ In: Preterm Birth. Croatia: InTech. • R O’Loughlin and K O’Donoghue (2011) ‘Risk Factors for First Trimester Miscarriage’ In: Miscarriage. New York: Nova Science Publishers. • Unterscheider J and O’Donoghue K; (2011) ‘Reduced Fetal Movements’ In: Obstetrics. Croatia: In Tech.

Peer Reviewed Journals • Bartels Aenne and O’Donoghue Keelin; (2011) ‘Cholesterol in Pregnancy — a review of knowns and unknowns’. Obstetric Medicine. • Ismail KI, Brennan DB, Marchocki Z, O’Donoghue K; (2011) ‘Intrapartum Cesarean Rates differ signiﬁcantly between ethnic groups — relationship to induction’. European Journal of Obstetrics & Gynecology and Reproductive Biology. • Khashan, AS,Kenny, LC,Laursen, TM,Mahmood, U,Mortensen, PB,Henriksen, TB,O’Donoghue, K; (2011) ‘Pregnancy and the Risk of Autoimmune Disease’. Plos One, 6. • McNamara K, O’Donoghue K, O’Connell O and Greene RA; (2011) ‘Antenatal and Intrapartum Care of Pregnancy with lethal fetal anomaly’. The Obstetrician & Gynaecologist. • N Egan, A Bartels, AS Khashan, DI Broadhurst, C Joyce, J O’Mullane, K O’Donoghue (2011) ‘Reference Standard For Serum Bile Acids In Pregnancy’. British Journal Obstetrics and Gynaecology. • O’Donoghue K, O’Regan KN, Sheridan CP, O’Connor OJ, Benson J, McWilliams S, Moore N, Murphy MJ, Chopra R, Higgins JR, Maher MM; (2011) ‘Investigation of the role of computed tomography as an adjunct to autopsy in the evaluation of stillbirth’. European Journal of Radiology. • O’Donoghue K; (2011) ‘Pregnancy and the risk of autoimmune disease — an exploration’. Chimera. • Ooi, P.V., Russell, N., O’Donoghue, K.; (2011) ‘Secondary recurrent miscarriage is associated with previous male birth’. Journal of Reproductive Immunology, 88 (1):38–41. • Peer, M and O’Donoghue K; (2011) ‘Osteopetrosis in Pregnancy — a rare case report’. Obstetric Medicine.

Conference Publications • Ä. Bartels, N. Egan, A. Khashan, C. Joyce, J. O’Mullane, K. O’Donoghue; (2011) Maternal cholesterol levels are elevated in normal pregnancy. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. Return to President’s Report • Bartels Ä, Egan N, Khashan A, Joyce C, O’Mullane J, O’Donoghue K; (2011) Maternal cholesterol levels are elevated throughout normal pregnancy. Society for Maternal and Fetal Medicine Annual Meeting. UCC Research Publications 2011–2012 | College of Medicine and Health cxiii

• C. McCarthy, K. O’Donoghue; (2011) Improving The Perinatal Medicine Clinic In Cork University Maternity Hospital. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. • C. O’Loughlin, M. Cunningham, K. O’Donoghue; (2011) Can ultrasound at thirty-two weeks gestation predict presentation of twins at time of delivery? Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. • Durand O’Connor A, O’ Donoghue K; (2011) Diagnosis Of Missed Miscarriage At Cork University Maternity Hospital. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland.

• I Ofﬁah, K. O’Donoghue ; (2011) An audit of amniocentesis at CUMH. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland.

• Khalid AS, Marchocki Z, Joyce C, O’Mullane J, O’Donoghue K; (2011) Establishing Trimester Specific Reference Ranges for Maternal Thyroid Function. Society for Gynecological Investigation Annual Meeting. • Khalid AS, Marchocki Z, O’Sullivan R, Joyce C, Stapleton M, O’Mullane J, O’Donoghue K; (2011) Establishing Trimester Specific Maternal Thyroid Function Reference Intervals. Perinatal Medicine 2011, British Maternal and Fetal Medicine 16th Annual Meeting. • Khalid AS, Marchocki Z, O’Sullivan R, Joyce C, Stapleton M, O’Mullane J, O’Donoghue K; (2011) Establishing trimester specific maternal thyroid function reference ranges. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. • M. Butler, P. O’Leary, K. O’Donoghue; (2011) Review Of The Use Of Blood Products In The Obstetric Population In Cork University Maternity Hospital. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. • M. Peer, K. O’Donoghue; (2011) Osteopetrosis in pregnancy — a case report. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland.

• Mahmood U, Fitzgibbon J and O’Donoghue K; (2011) Fetal cells play a role in maternal wound healing after pregnancy. Perinatal Medicine 2011, British Maternal and Fetal Medicine 16th Annual Meeting.

• Mahmood U, Fitzgibbon J, O’Donoghue K; (2011) Microchimeric Fetal Cells are involved in Maternal Wound healing after pregnancy. Society for Gynecological Investigation Annual Meeting. • Murphy NM, Broadhurst D, Gilligan O,Jabarudin WNE, Khashan A, Kenny LC and O’Donoghue K ; (2011) Cross-sectional study to identify ranges of D-Dimers in pregnancy. Society for Maternal and Fetal Medicine Annual Meeting. • Murphy NM, Broadhurst D, Gilligan O,Jabarudin WNE, Khashan A, O’Donoghue K and Kenny LC; (2011) Establishing Reference Ranges for D-dimers in Normal Pregnancy. Society for Gynecological Investigation Annual Meeting.

Return to • O’Loughlin C, Cunningham M, O’Donoghue K; (2011) Can ultrasound at 32 weeks gestation predict presentation of twins at delivery? Perinatal President’s Report Medicine 2011, British Maternal and Fetal Medicine 16th Annual Meeting. UCC Research Publications 2011–2012 | College of Medicine and Health cxiv

• U Mahmood, J F. Fitzgibbon, K O’Donoghue; (2011) Do children heal their mother’s wounds? Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland.

O’Flynn, Siun

Peer Reviewed Journals • Bennett D, Kelly M, O’Flynn S. ; (2011) ‘DREEM — Time to evaluate?’. Medical teacher.

Other Journals • Hammond S, O’Rourke M, Kelly M, Bennett D, O’Flynn S.; (2011) ‘Apsychometric appraisal of the DREEM’ BMC Medical Education.

Conference Publications • Joy, A;Sahm,L;Mathers,J;O‘Flynn,S;Kerins,D; (2011) Interprofessional ward-based teamwork to enable safe prescribing practice in healthcare undergraduates. ASME Annual Scientific Meeting 13–15 July, RCPE Edinburgh. • Kelly M, Bennett, D., O’ Flynn, S; (2011) General Practice, The DREEM attachment? Academic Units and Departments of General Practice Ireland AUDPI Dublin Jan 2011. • Kelly M, Foley, T, O’Flynn S; (2011) Teamwork promotes Patient Centredness. Evaluation of a Primary Care Team placement. Academic Units and Departments of General Practice Ireland AUDPI Dublin Jan 2011. • Kelly, M; Bennett, D;O‘Flynn, S; Dornan, T; (2011) Clinical workplace learning — how to evaluate. AMEE Annual Scientific Meeting Vienna. • M Kelly, S O’Flynn, D Bennett, A Joy, M O’Rourke; (2011) Does professionalism decline over the course of medical education? Professionalism profiling using quantitative tools in an integrated medical curriculum. AMEE 2011 Vienna. • O’Tuathaigh,C,Boylan,G,O’Flynn,S; (2011) Relationship between motivational factors and selection of student slected components [SSCs] in undergraduate medical students. ASME Annual Scientific Meeting,Royal College of Physicians Edinburgh. • O’Rourke, M; Hammond, S; Kelly, M; Bennett, D & O’Flynn, S ; (2011) Psychometric Properties of DREEM. Irish Network of Medical Educators Annual Scientific Meeting May 2011 Trinity College Dublin.

O’Halloran, Ken

Peer Reviewed Journals Return to President’s Report • El-Khoury R, Bradford A, O’Halloran KD (2011) ‘Chronic hypobaric hypoxia increases isolated rat fast-twitch and slow-twitch limb muscle force and fatigue’. Physiological Research. UCC Research Publications 2011–2012 | College of Medicine and Health cxv

• McMorrow C, Fredsted A, O’Connell RA, Carberry J, Bradford A, Jones JFX, O’Halloran KD. (2011) ‘Chronic hypoxia increases rat diaphragm muscle endurance and sodium-potassium ATPase pump content’. European Respiratory Journal: the ofﬁcal journal of the European Respiratory Society, 37:1474–1481.

• O’Halloran KD. (2011) ‘Double-trouble for respiratory control in Pompe disease’. Frontiers in Physiology, 2. • Skelly JR, Edge D, Shortt CM, Jones JFX, Bradford A, O’Halloran KD. (2011) ‘Respiratory control and sternohyoid muscle structure and function in aged male rats: Decreased susceptibility to chronic intermittent hypoxia’. Respiratory Physiology & Neurobiology.

• Skelly JR, Edge D, Shortt CM, Jones JFX, Bradford A, O’Halloran KD. (2011) ‘Tempol ameliorates pharyngeal dilator muscle dysfunction in a rodent model of chronic intermittent hypoxia’. American Journal of Respiratory Cell and Molecular Biology.

• Skelly JR, O’Connell RA, Jones JFX, O’Halloran KD. (2011) ‘Structural and functional properties of an upper airway dilator muscle in aged obese male rats’. Respiration, 82:539–549.

Conference Publications • Chow HB, Shortt C, Bradford A, Jones JFX, O’Halloran KD (2011) Chronic intermittent hypoxia alters diaphragm MHC ﬁbre distribution but not oxidative capacity in the rat. European Muscle Conference (Berlin).

• Edge D, Bradford A, Jones JFX, O’Halloran KD (2011) Chronic Intermittent Hypoxia Alters Genioglossus Motor Unit Discharge Patterns in the Anaesthetized Rat. International Society for Arterial Chemoreception (Hamilton, Canada).

• Edge D, Bradford A, Jones JFX, O’Halloran KD (2011) Genioglossus and Sternohyoid Motor Unit Properties in a Rat Model of Chronic Intermittent Hypoxia. Irish Thoracic Society (Dublin). • Edge D, Bradford A, O’Halloran KD (2011) Chronic Intermittent Hypoxia Increases Apnoea Index in Sleeping Rats. International Society for Arterial Chemoreception (Hamilton, Canada). • Lewis P, McMorrow C, Jones JFX, O’Halloran KD (2011) Chronic hypoxia does not affect rat respiratory muscle ﬁbre oxidative capacity. European Muscle Conference (Berlin). • McDonald F, O’Halloran KD (2011) Is nitric oxide implicated in respiratory muscle adaptation to chronic intermittent hypoxia? European Muscle Conference (Berlin).

• McMorrow C, Bradford A, Jones JFX, O’Halloran KD (2011) Improved anoxic tolerance in chronic hypoxic rat diaphragm is nitric oxide dependent. International Hypoxia Symposium (Lake Louise, Canada).

• O’Connell RA, O’Halloran KD (2011) Chronic intermittent hypoxia induces respiratory muscle weakness in neonatal rats which persists into early adult life. Physiological Society (Oxford): Proc Physiol Soc 23: PC 280. • O’Connor ET, O’Halloran KD, Jones JFX (2011) Propranolol Does Not Affect the Hindlimb Vasodilatation Elicited by Stimulation of Superior Laryngeal Nerve Paraganglia. International Society for Arterial Chemoreception (Hamilton, Canada). Return to President’s Report • O’Connor ET, O’Halloran KD, Jones JFX (2011) Vagal paraganglia of the rat. International Hypoxia Symposium (Lake Louise, Canada). UCC Research Publications 2011–2012 | College of Medicine and Health cxvi

• Shortt C, Bradford A, O’Halloran KD (2011) Chronic intermittent hypoxia-induced respiratory muscle fatigue is mediated by reactive oxygen species. Physiological Society (Oxford): Proc Physiol Soc: PC 275. • Shortt C, McMorrow C, Fredsted A, Jones JFX, Bradford A, O’Halloran KD (2011) The effects of chronic sustained and intermittent hypoxia on muscle physiology. Physiological Society (Oxford): Proc Physiol Soc 23: SA93.

O’Keeffe, Gerard

Peer Reviewed Journals • Nolan AM, Nolan YM, O’Keeffe GW; (2011) ‘IL-1β inhibits axonal growth of developing sympathetic neurons’. Molecular and Cellular Neuroscience, 48 (2):142–150.

O’Mahony, Denis

Book Chapters • D O’Mahony, PF Gallagher; (2011) ‘Medication Review and Evidence-based Prescribing’ In: Oxford Desk Reference in Geriatric Medicine. Oxford, UK: Oxford University Press.

O’Mahony, Siobhain

Peer Reviewed Journals • Cryan JF, O’Mahony SM; (2011) ‘The microbiome-gut-brain axis: from bowel to behavior’. Neurogastroenterology and Motility, 23 (3):187–192.

O’Malley, Dervla

Book Chapters • O’Malley, D (2011) ‘Crosstalk Between the Stress and Immune Factors Contribute to the Pathophysiology of Irritable Bowel Syndrome’ In: Leon V. Berhardt (Eds.). Advances in Medicine and Biology. Volume 23. New York, USA: Nova Publishers.

Peer Reviewed Journals • O’Malley D, Dinan TG, Cryan JF (2011) ‘Altered expression and secretion of colonic interleukin-6 in a stress-sensitive animal model of brain-gut axis dysfunction’. Journal of Neuroimmunology, 235 (1–2):48–55. • O’Malley D, Quigley EM, Dinan TG, Cryan JF (2011) ‘Do interactions between stress and immune responses lead to symptom exacerbations in irritable bowel syndrome?’. Brain: a journal of neurology, 25 (7):1333–1341. • O’Malley, D,Dinan, TG,Cryan, JF; (2011) ‘Neonatal maternal separation in the rat impacts on the stress responsivity of central corticotropin-releasing factor receptors in adulthood’. Psychopharmacology, 214:221–229. Return to President’s Report • O’Malley, D,Liston, M,Hyland, NP,Dinan, TG,Cryan, JF; (2011) ‘Colonic soluble mediators from the maternal separation model of irritable bowel syndrome activate submucosal neurons via an interleukin-6-dependent mechanism’. The American Journal of Physiology, 300:241–252. UCC Research Publications 2011–2012 | College of Medicine and Health cxvii

Conference Publications • Moloney G, Fanning A, O’ Malley D, Scanlan N, Melgar S, Nally K (2011) An Altered Immune Proﬁle in IBS Patients? DDW, Chicago. • O’Malley, D; Quigley, EM; Cryan, JF; Dinan, TG (2011) Plasma derived from patients with irritable bowel syndrome excites rat submucosal neurons via IL-6 and CRFR1 dependent mechanisms. DDW, Chicago. Pando Kelly, Jackelina

Peer Reviewed Journals • Abdias Hurtado Arestegui, Richard Fuquay, Jeffrey Sirota, Erik R. Swenson, Robert B. Schoene, J. Ashley Jefferson, Wei Chen,Ÿ Xue-qing Yu, Jackeline Pando Kelly, Richard J. Johnson, and Elizabeth Escudero. (2011) ‘High Altitude Renal Syndrome (HARS)’.Journal of American Society of Nephrology, 22:1–6. Perry, Ivan

Peer Reviewed Journals • Brestoff, JR,Perry, IJ,Van den Broeck, J; (2011) ‘Challenging the role of social norms regarding body weight as an explanation for weight, height, and BMI misreporting biases: Development and application of a new approach to examining misreporting and misclassiﬁcation bias in surveys’. BMC Public Health, 11. • Harrington, J.,Fitzgerald, A. P.,Layte, R.,Lutomski, J.,Molcho, M.,Perry, I. J.; (2011) ‘Sociodemographic, health and lifestyle predictors of poor diets’. Public Health Nutrition, 14 (12):2166–2175. • Layte R, Harrington J, Sexton E, Perry IJ, Cullinan J, Lyons S; (2011) ‘Irish exceptionalism? local food environments and dietary quality’. Jnl. Epidemiology & Community Health, 65 (10):881–888. • Lutomski JE, J van den Broeck, J Harrington, F Shiely, IJ Perry; (2011) ‘Sociodemographic, lifestyle, mental health and dietary factors associated with direction of misreporting of energy intake’. Public Health Nutrition, :1–10. • O’Donovan D óg, Byrne S, Browne G, Perry I and Sahm L; (2011) ‘Variation in estimated ten-year cardiovascular risk across four risk scoring tools in both a general population sample and an occupational setting’. Journal of Epidemiology and Community Health. Conference Publications • Mc Carthy Vera JC, Perry IJ, Greiner BA; (2011) Are older workers more susceptible to job strain? A case-control study on cardiovascular disease comparing older and younger workers. Society for Social Medicine Annual Scientiﬁc Meeting,, Warwick University, England, 2011–09–14- 2011–09–16. Phillips, Catherine

Peer Reviewed Journals Return to • Delgado-Lista, J.,Perez-Martinez, P.,Garcia-Rios, A.,Phillips, C. M.,Williams, C. M.,Gulseth, H. L.,Helal, O.,Blaak, E. E.,Kiec-Wilk, B.,Basu, S.,Drevon, President’s Report C. A.,Defoort, C.,Saris, W. H.,Wybranska, I.,Riserus, U.,Lovegrove, J. A.,Roche, H. M.,Lopez-Miranda, J.; (2011) ‘Pleiotropic effects of TCF7L2 gene variants and its modulation in the metabolic syndrome: from the LIPGENE study’. Atherosclerosis, 214 (11):110–6110. UCC Research Publications 2011–2012 | College of Medicine and Health cxviii

• Garcia-Rios A, Delgado-Lista J, Perez-Martinez P, Phillips CM, Ferguson JF, Gjelstad IM, Williams CM, Karlström B, Kie¢-Wilk B, Blaak EE, Lairon D, Planells R, Malczewska-Malec M, Defoort C, Riserus U, Saris WH, Lovegrove JA, Drevon CA, Roche HM, Lopez-Miranda J (2011) ‘Genetic variations at the lipoprotein lipase gene inﬂuence plasma lipid concentrations and interact with plasma n-6 polyunsaturated fatty acids to modulate lipid metabolism’. Atherosclerosis, 218 (2):416–422.

• Oliver E, McGillicuddy FC, Harford KA, Reynolds CM, Phillips CM, Ferguson JF, Roche HM (2011) ‘Docosahexaenoic acid attenuates macrophage-induced inﬂammation and improves insulin sensitivity in adipocytes-speciﬁc differential effects between LC n-3 PUFA’.Journal of Nutritional Biochemistry.

• Phillips CM, Goumidi L, Bertrais S, Field MR, McManus R, Hercberg S, Lairon D, Planells R, Roche HM; (2011) ‘Dietary saturated fat, gender and genetic variation at the TCF7L2 locus predict the development of metabolic syndrome’. Journal of Nutritional Biochemistry.

• Phillips CM, Kesse-Guyot E, Ahluwalia N, McManus R, Hercberg S, Lairon D, Planells R, Roche HM (2011) ‘Dietary fat, abdominal obesity and smoking modulate the relationship between plasma complement component 3 concentrations and metabolic syndrome risk’. Atherosclerosis. • Phillips, C. M.,Goumidi, L.,Bertrais, S.,Field, M. R.,McManus, R.,Hercberg, S.,Lairon, D.,Planells, R.,Roche, H. M.; (2011) ‘Gene-nutrient interactions and gender may modulate the association between ApoA1 and ApoB gene polymorphisms and metabolic syndrome risk’. Atherosclerosis, 214 (22):408–14408.

Quigley, Eamonn

Book Chapters • Abu Shanab A, Quera R, Quigley EMM; (2011) ‘Small intestinal bacterial overgrowth’ In: Textbook of Clinical Gastroenterology and Hepatology 2nd Edition. New York: Elsevier. • Abu Shanab A, Quera R, Quigley EMM; (2011) ‘Supercrescimento Bacteriano no Intestino Delgado’ In: Gastroenterologia Essencial. Rio de Janeiro: Gianabara Koogan. • Quigley EMM; (2011) ‘Colon cancer’ In: Encyclopedia of Dairy Sciences, 2nd Ed. New York: Academic Press.

• Quigley EMM; (2011) ‘Megacolon and intestinal pseudo-obstruction’ In: Textbook of Clinical Gastroenterology and Hepatology 2nd Edition. New York: Elsevier.

• Quigley EMM; (2011) ‘Which probiotics are best for IBS?’ In: Curbside Consultation in IBS: 49 Clinical Questions. Thorofare, New Jersey: Slack Inc. • Schmidt-Martin D, Quigley EMM; (2011) ‘Organic causes of dyspepsia’ In: Dyspepsia. New York: Springer.

• Schmidt-Martin D, Quigley EMM; (2011) ‘The Deﬁnition of Dyspepsia’ In: Dyspepsia. New York: Springer. Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxix

Peer Reviewed Journals • Craig OF, Hyland NP, Quigley EM; (2011) ‘Functional Dyspepsia-Another Red State! Eosinophils, MacRophages, and Postinfectious Dyspepsia’. Gastroenterology.

Rae, Mark

Peer Reviewed Journals • Munro, G,Erichsen, HK,Rae, MG,Mirza, NR; (2011) ‘Aquestion of balance — Positive versus negative allosteric modulation of GABA(A) receptor subtypes as a driver of analgesic efﬁcacy in rat models of inﬂammatory and neuropathic pain’. Neuropharmacology, 61:121–132.

• Ruane-O’Hora, T,Rae, MG,Markos, F; (2011) ‘Effect of clazosentan, a selective endothelin A receptor antagonist, and tezosentan, a dual endothelin A/B antagonist, on pulsatile shear stress induced constriction of the iliac in the anaesthetized pig’. Clinical and Experimental Pharmacology and Physiology, 38:515–520.

Conference Publications • MORLEY, S.J., KEOGH, M.K. & RAE, M.G (2011) Evidence of altered intracellular calcium handling in week old cultured hippocampal neurones of a murine model of Alzheimer’s disease (3xTg AD) RAMI.

Redmond, Henry Paul

Peer Reviewed Journals • Al Sahaf O, Myers E, Jawad M, Browne TJ, Winter DC, Redmond HP ; (2011) ‘The prognostic signiﬁcance of extramural deposits and extracapsular lymph node invasion in colon cancer’. Diseases of the Colon and Rectum, 54 (8):982–988.

• Li CH, Liu J, An M, Redmond HP, Wang JH ; (2011) ‘Bacterial lipoprotein-induced tolerance is reversed by overexpression of IRAK-1’. • Romics, L,Dy, EA,Coffey, JC,Herlihy, D,Aftab, F,Chaudhry, MZ,Fogarty, K,O’Donnell, JA,Redmond, HP; (2011) ‘Initial experiences with isolated limb perfusion for unresectable melanoma of the limb’. Rna-A Publication of The Rna Society, 180:517–520. • Romics, L,McNamara, B,Cronin, PA,O’Brien, ME,Relihan, N,Redmond, HP; (2011) ‘Unusual paraneoplastic syndromes of breast carcinoma: a combination of cerebellar degeneration and Lambert-Eaton Myasthenic Syndrome’. Rna-A Publication of The Rna Society, 180:569–571.

Ruane-O’Hora, Therese

Peer Reviewed Journals • Ruane-O’Hora T, Markos F, Wiernsperger NF, Noble MI. (2011) ‘Metformin causes Nitric Oxide Mediated Dilatation in a shorter time than Insulin in the Iliac Artery of the Anaesthetised Pig’. Journal of Cardiovascular Pharmacology.

Return to • Ruane-O’Hora, T,Hall, WJ,Markos, F; (2011) ‘The effect of alphaxalone-alphadolone, propofol, and pentobarbitone anaesthesia on the President’s Report beta-endorphin and ACTH response to haemorrhage in the pig’. Physiological Research, 89:521–526. UCC Research Publications 2011–2012 | College of Medicine and Health cxx

Manuscript • Ruane O’Hora T, Markos F, Wainwright C, Al-Obaidi M, Noble MIM (2011) The responses of the iliac artery to insulin: direct delayed nitric oxide-mediated dilatation. Manuscript.

Ryan, Aisling

Ryan, Cornelius A.

Book Chapters • Jennifer Murphy, Aimie Brennan (2011) ‘Making Connections: Strengthening and Documenting Intentional Teaching for Integrative Learning’ In: NAIRTL Grants Initiative: Evaluation of Impact. Distillery House, Cork: NAIRTL.

• Augustine Josie Ganda, Laila Fara Ibrahim, Kannan Natchimuthu, C. Anthony Ryan. (2011) ‘No more tears? Maternal Involvement During the Newborn Screening Examination’. Clinical Pediatrics, 50 (8):753–758.

• Carlson V, Omer M, Ibrahim S, Ahmed S, O’Byrne K, Kenny L, Ryan C (2011) ‘Fifty years of Sudanese hospital-based obstetric outcomes and an international partnership’. An International Journal of Obstetrics and Gynaecology, 118 (13):1608–1616. • Hawkes, C. P.,Dempsey, E. M.,Ryan, C. A.; (2011) ‘The Neopuff’s PEEP valve is ﬂow sensitive’. Acta Paediatr, 100 (33):360–3360. • Murphy, JN,Ryan, CA; (2011) ‘Handover rounds in Irish hospitals’. Irish Medical Journal, 180:27–30.

• Nadeem, M.,Murray, D. M.,Boylan, G. B.,Dempsey, E. M.,Ryan, C. A.; (2011) ‘Early blood glucose proﬁle and neurodevelopmental outcome at two years in neonatal hypoxic-ischaemic encephalopathy’. BMC Pediatr, 11. • O’Sullivan, E,Ryan, CA (2011) ‘Aninternational comparison of professional attitudes among medical students in Ireland’. Medical Teacher, Return to 33:424–425. President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxxi

Shanahan, Fergus

Peer Reviewed Journals • Brint EK, MacSharry J, Fanning A, Shanahan F, Quigley EM (2011) ‘Differential expression of toll-like receptors in patients with irritable bowel syndrome’. The American Journal of Gastroenterology, 106 (2):329–336. • Brint, EK,MacSharry, J,Fanning, A,Shanahan, F,Quigley, EMM; (2011) ‘Differential Expression of Toll-Like Receptors in Patients With Irritable Bowel Syndrome’. Rna-A Publication of The Rna Society, 106:329–336. • Claesson, M. J.,Cusack, S.,O’Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, A.P.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O’Connor, M.,Harnedy, N.,O’Connor, K.,Henry, C.,O’Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O’Toole, P. W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings of The National Acadamy of Sciences, 108 Suppl 1:4586–914586. • Crush L, O’Connor OJ, Plant W, Clarkson MR, Shanahan F, Maher MM; (2011) ‘Perplexing plain abdominal x-ray’. Gut, 60 (2). • O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222. • O’Neill SB, O’Connor OJ, McWilliams SR, Shanahan F, Maher MM; (2011) ‘Minimization of radiation exposure due to computed tomography in inflammatory bowel disease’. Clinics and research in hepatology and gastroenterology. • O’Sullivan, A,Gibney, MJ,Connor, AO,Mion, B,Kaluskar, S,Cashman, KD,Flynn, A,Shanahan, F,Brennan, L; (2011) ‘Biochemical and metabolomic phenotyping in the identification of a vitamin D responsive metabotype for markers of the metabolic syndrome’. Molecular Nutrition and Food Research, 55:679–690. • Pruteanu, M,Hyland, NP,Clarke, DJ,Kiely, B,Shanahan, F; (2011) ‘Degradation of the Extracellular Matrix Components by Bacterial-derived Metalloproteases: Implications for Inflammatory Bowel Diseases’. Inflammatory Bowel Diseases, 17:1189–1200. • Rea, MC,Dobson, A,O’Sullivan, O,Crispie, F,Fouhy, F,Cotter, PD,Shanahan, F,Kiely, B,Hill, C,Ross, RP; (2011) ‘Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon’. Proceedings of the National Academy of Sciences of the United States of America, 108:4639–4644. • Rosberg-Cody, E,Stanton, C,O’Mahony, L,Wall, R,Shanahan, F,Quigley, EM,Fitzgerald, GF,Ross, RP; (2011) ‘Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice’. Microbiology-SGM, 157:609–615.

Conference Publications • Quigley, EM,Groeger, D,O’Mahony, L,Scully, P,Dinan, TG,Bourke, JF,Shanahan, F,Kiely, B (2011) Oral administration of the probiotic organism, Biﬁdobacterium infantis 35624 exerts systemic anti-inﬂammatory effects. Journal of Gastroenterology and Hepatology.

Return to Other President’s Report • Rampton, DS,Shanahan, F (2011) Increased health burden associated with Clostridium difﬁcile diarrhoea in inﬂammatory bowel disease. Other. UCC Research Publications 2011–2012 | College of Medicine and Health cxxii

Shiely, Frances

Peer Reviewed Journals • Lutomski JE, J van den Broeck, J Harrington, F Shiely, IJ Perry; (2011) ‘Sociodemographic, lifestyle, mental health and dietary factors associated with direction of misreporting of energy intake’. Public Health Nutrition, :1–10.

Shorten, George

Edited Books • harmon d, barrett j, loughnane f, ﬁnucane b, shorten g (Ed.). (2011) peripheral nerve blocks and per-operative pain relief, usa: saunders elsevier.

Peer Reviewed Journals • Ajmal, M.,Power, S.,Smith, T.,Shorten, G. D.; (2011) ‘Ergonomic task analysis of ultrasound-guided femoral nerve block: a pilot study’. Journal of Clinical Anesthesia, 23 (11):35–4135.: WOS:000287465000006. • Breen D, Bogar L, Heigl P, Rittberger J, Shorten GD; (2011) ‘Validation of a clinical assessment tool for spinal anaesthesia’. Acta Anaesthesiologica Scandinavica. • Chalmers P, Dunngalvin A, Shorten G; (2011) ‘Reflective ability and moral reasoning in final year medical students: A semi-qualitative cohort study’. Medical Teacher, 33 (5):1–9. • Hegarty D, O’Connor OJ, Moore M, O’Regan KN, Shorten G, Maher MM; (2011) ‘Association between preoperative magnetic resonance imaging, pain intensity and quantitative sensory testing in patients awaiting lumbar diskectomy’. Journal of Medical Imaging and Radiation Oncology, 55 (1):4–10. • Hegarty DA, Shorten GD; (2011) ‘ARandomised, Placebo-controlled Trial of the Effects of Preoperative Pregabalin on Pain Intensity and Opioid Consumption following Lumbar Discectomy’. The Korean journal of pain, 24 (1):22–30. • Kulcsr ZM, Lvquist E, Fitzgerald AP, Aboulafia A, Shorten GD; (2011) ‘Testing haptic sensations for spinal anesthesia’. Regional Anesthesia and Pain Medicine, 36 (1):12–16. • Lee, P. J.,Delaney, P.,Keogh, J.,Sleeman, D.,Shorten, G. D.; (2011) ‘Catecholamine-O-Methyltransferase Polymorphisms Are Associated With Postoperative Pain Intensity’. Clinical Journal of Pain, 27 (22):93–10193.:WOS:000285993200001. • Lvquist E, O’Sullivan O, Oh’Ainle D, Baitson G, Shorten G, Avis N; (2011) ‘VR-based training and assessment in ultrasound-guided regional anesthesia: from error analysis to system design’. Studies In Health Technology and Informatics, 163:304–310.

Smith, Simon

Peer Reviewed Journals Return to President’s Report • Simon Smith, Patrick Henn, Robert Gaffney, Helen Hynes, John McAdoo and Colin Bradley; (2011) ‘Patient safety: using end objectives to drive learning’. Medical Education, 45 (7):757–757. UCC Research Publications 2011–2012 | College of Medicine and Health cxxiii

Toulouse, André

Book Chapters • Collins L.M., Toulouse A., Nolan Y.M.; (2011) ‘Inﬂammation in Parkinson’s disease: causes and consequences’ In: Juliana Dushanova (Eds.). Mechanisms in Parkinson’s Disease — Models and Treatments. Croatia: InTech. • Sullivan A.M., Toulouse A.; (2011) ‘The potential of Neurotrophic Factors for the Treatment of Parkinson’s Disease’ In: David I. Finkelstein (Eds.). Towards New Therapies for Parkinson’s Disease. Croatia: InTech.

Peer Reviewed Journals • Pappas J.J., Toulouse A., Basik M., Lévesque L., Bradley W.E.C.; (2011) ‘Knockdown of RARB2 Identiﬁes a Dual Role in Cancer’. Genes Chromosomes and Cancer, 50:700–714. • Sullivan A.M., Toulouse A.; (2011) ‘Neurotrophic factors for the treatment of Parkinson’s disease’. Cytokine & Growth Factor Reviews, 22 (3):157–165.

Conference Publications • Collins L.M., Toulouse A., Nolan Y.M. (2011) 6-hydroxydopamine affects MKP-1 expression in differentiated embryonic rat ventral mesencephalic neural precursor cells. 6th Neuroscience Ireland Annual Conference National University of Ireland Maynooth, 2011–09–01- 2011–09–02. • Collins L.M., Toulouse A., Nolan Y.M. (2011) Mitogen-activated protein kinase phosphatase-1 (MKP-1) expression in 6-hydroxydopamine-treated embryonic rat mesencephalic neural precursor cells. 41st Annual Meeting of the Society for Neuroscience Washington DC, 2011–11–12- 2011–11–16. • Collins L.M., Toulouse A., Nolan Y.M.; (2011) Effect of 6-hydroxydopamine on MKP-1 expression in differentiated embryonic rat ventral mesencephalic neural precursor cells. 8th IBRO World Congress of Neuroscience, Florence, Italy, 2011–07–14- 2011–07–18. • O’Brien I.S., Sullivan A.M., Nolan Y.M., Toulouse A.; (2011) Expression of the 2F7 epitope in the rat embryo, and adult brain. 8th IBRO World Congress of Neuroscience, Florence, Italy, 2011–07–14- 2011–07–18.

Van Pelt, Frank

Peer Reviewed Journals • Guillaume Juhel, Emeline Batisse, Quitterie Hugues, Deirdre Daly, Frank N.A.M. van Pelt, John O’Halloran, and Marcel A.K. Jansen; (2011) ‘Alumina nanoparticles enhance growth of Lemna minor’. Aquatic Toxicology. Return to President’s Report • O’Driscoll, D.,Skrabakova, Z.,O’Halloran, J.,van Pelt, F. N.,James, K. J.; (2011) ‘Mussels Increase Xenobiotic (Azaspiracid) Toxicity Using a Unique Bioconversion Mechanism’. Environ Sci Technol. UCC Research Publications 2011–2012 | College of Medicine and Health cxxiv

Ó Tuathaigh, Colm

Peer Reviewed Journals • O’Tuathaigh CMP, Clarke G, Walsh J, Desbonnet L, Petit E, O’Leary C, Karayiorgou M , Gogos JA, Dinan TD, Cryan J, Waddington JL (2011) ‘Genetic or pharmacological inactivation of COMT inﬂuences cannabinoid-induced expression of schizophrenia-related phenotypes’. International Journal of Neuropsychopharmacology. • Rünker A, O’Tuathaigh CMP, Dunleavy M, Morris D, Little G, Corvin A, Gill M, Henshall D,Waddington JLW, Mitchell KJ (2011) ‘Mutation of Semaphorin-6A disrupts limbic and cortical connectivity and models neurodevelopmental psychopathology’. PloS ONE.

Conference Publications • O’Tuathaigh,C,Boylan,G,O’Flynn,S; (2011) Relationship between motivational factors and selection of student slected componenets [SSCs] in undergraduate medical students. ASME Annual Scientiﬁc Meeting,Royal College of Physicians Edinburgh. School of Nursing and Midwifery

Andrews, Tom

Book Chapters • Andrews, T; (2011) ‘Reﬂections on generating a formal grounded theory’ In: Grounded Theory. The philosophy, method and work of Barney Glaser. Boca Raton, Florida: BrownWalder Press. • McCallin, A; Nathanial, A; Andrews, T; (2011) ‘Learning methodology minus mentorship’ In: Grounded Theory. The philosophy, method and work of Barney Glaser. Boca Raton, Florida: BrownWalker Press.

Peer Reviewed Journals • Buckley, P and Andrews, T; (2011) ‘Intensive care nurses’ knowledge of critical care family needs’. Intensive and Critical Care Nursing.

Conference Publications • Andrews, T; (2011) An investigation int the effectiveness of introducing a medical medical team. • Andrews, T; (2011) An investigation into the effectiveness of introducing a medical emergency team. European Federaton of Critical Care Nursing Spring Congress 2011–03–24- 2011–03–26.

Arkins, Brigid

Peer Reviewed Journals • Arkins B.; (2011) ‘First Steps in Practitioner Research: A Guide to Understanding and Doing Research in Counselling and Health and Social Care’. Return to Journal of Psychiatric and Mental Health Nursing, 18 (5). President’s Report • Arkins B.; (2011) ‘Practitioner Based Research: Power, Discourse and Transformation’. Journal of Psychiatric and Mental Health Nursing, 18 (6). UCC Research Publications 2011–2012 | College of Medicine and Health cxxv

Conference Publications • Arkins B. and Tyrrell M. Herlihy E.; (2011) Risk taking behaviour, substance use and interpersonal conﬂict in young people presenting to the ED Royal college of Surgeons in Ireland Faculty of Nursing and Midwifery 30th Annual International Research Conference 2011.

• Arkins B.; (2011) Perinatal mental health care. 4th CRSI Annual Joint Conference with University College Cork — Female Perspectives in Mental Health Care. • Creedon, R., O’Conell, e. & Arkins,B.; (2011) Nurse Prscribing: clinical issues in practice. The Inaugural National Conference of Nurse and Midwife Prescribing UCC, 2011–09–09- 2011–09–09.

Burton, Aileen

Other Journals • Burton, A., Mikkonen, I., Buckley, C., Beseckas, P., Creedon, S., Hynynen, M-A, Kaijako, M., Kuzminskiene, L., Leahy-Warren, P. Mikkonen, I., Mikutaviciene, I., Puputti, S., Rasteniene, V., Rikonen, R., Simm, P., Soovali, E., Tianen, A. Vaisto, R. ; (2011) ‘Developing diabetes nursing support programmes in Estonia, Finland, Ireland and Lithuania’ European Diabetes Nursing, 8 (1).

Caples, Maria

Book Chapters • Dalton, C; Caples, M; Marsh, L; (2011) ‘Physical Health’ In: Atherton, H. and Crickmore, D (Eds.). Learning Disabilities- Towards Inclusion 6th Ed. Oxford: Elsevier.

• Marsh, L., Dalton, C and Caples, M.; (2011) ‘Living with Down Syndrome’ In: Hallawells Case Studies in Learning Disabilities. London: McGraw- Hill Education.

Peer Reviewed Journals • Caples, M,Sweeney, J; (2011) ‘Quality of life: a survey of parents of children/adults with an intellectual disability who are availing of respite care’. British Journal of Learning Disabilities, 39:64–72.

Conference Publications • Marsh, L., McCarthy, M., Caples, M., Dalton, C., Windle, R. and Laverty, H. (2011). ; (2011) Show Me The Learning- Reusable Learning Objects as Return to an active learning experience & resource. National Academy 5th Annual Conference & Galway Symposium on Higher Education Galway. President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxxvi

Coffey, Alice

Conference Publications • Coffey, A ; (2011) Age related perception of readiness for discharge. 30th Annual International Nursing and Midwifery Research Conference.

Creedon, Rena

Book Chapters • Creedon, R. & O’ Connell, E. ; (2011) ‘Clinical pracricum in Nurse / Midwife Prescribing’ In: Rena Creedon (Eds.). Foundations of Nurse Prescribing Education. Cork: Cork University Press. • Creedon, R. ; (2011) ‘Assessment Strategy’ In: Creedon, R (Eds.). Foundations of Nurse Prescribing Education. Cork: Cork University Press.

• Creedon, R., McCarthy, J., Fehin, P. & McCarthy, B. ; (2011) ‘Professional, Ethical, Legal and Communication Aspects of Prescribing’ In: Creedon, R (Eds.). Foundations of Nurse Prescribing Education. Cork: Cork University Press.

Edited Books • Creedon, R (Ed.). (2011) Foundations of Nurse Prescribing Education, Cork: Cork University Press.

Peer Reviewed Journals • Creedon, R. & Weathers, E. ; (2011) ‘The impact of nurse prescribing on patients with osteoarthritis’. British Journal of Community Nursing, 16 (7):342–347.

• Creedon, R. ; (2011) ‘The psychological effects of living with chronic oedema’. British Journal of Community Nursing, 16 (4):S10-S16. • Creedon, R.; (2011) ‘The role of the nurse prescriber in pain management’. Journal Of Anaesthetics and Recovery Nursing, 5 (3):6–8.

• Weathers, E. & Creedon, R. ; (2011) ‘The Impact of Osteoarthritis on Psychological Wellbeing’. British Journal of Nursing, 20 (4):243–246.

Conference Publications • Creedon, R., O’Conell, e. & Arkins,B.; (2011) Nurse Prscribing: clinical issues in practice. The Inagural National Conference of Nurse and Midwife Prescribing UCC, 2011–09–09- 2011–09–09. • Creedon, R.; (2011) The Experience and Challenges of Nurse Prescribing in Ireland. Launch of the Nurse prescribing programme, Finland. Invited keynote speaker 2011–02–13- 2011–02–15. • O’Connell, E., Creedon, R., McCarthy, G. & Lehane, B.; (2011) Nurse prescribing: a literature review. The Inagural National Conference of Nurse and Midwife Prescribing UCC, 2011–09–09- 2011–09–09. Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxxvii

Cummins, Ann

Peer Reviewed Journals • Creedon S.A. & Cummins A. (2011) ‘Development of a Blended Model of Teaching and Learning for Nursing Students on Rostered Placement to Ensure Competence in Information and Communication Technology for Professional Practice in Ireland’. Computers Informatics Nursing. • O’Shea M., Cummins A., Kelleher A. (2011) ‘The perceived effectiveness of a pre-admission visit for children (and their parents) undergoing day surgery procedures’. Journal of Perioperative Practice, 21 (7):244–245.

Conference Publications • O’Mahony K., Cummins A. & Barry F. (2011) A Strategy to Improve the Care of Patients with a Peripheral Inserted Catheter (PIC) Safe Patient Care: Healthcare -Associated Infection: Prevention and Control for All Brookﬁeld Health Sciences Complex, UCC, 2011–09–07- 2011–09–09.

Dalton, Caroline

Book Chapters • Dalton, C; Caples, M; Marsh, L; (2011) ‘Physical Health’ In: Atherton, H. and Crickmore, D (Eds.). Learning Disabilities- Towards Inclusion 6th Ed. Oxford: Elsevier.

Peer Reviewed Journals • Dalton, C & Sweeney, J. ; (2011) ‘Communication supports in residential services for people with an intellectual disability’. British Journal of Learning Disabilities. • Dalton, C., Caples M., & Marsh, L.; (2011) ‘Management of dysphagia’. Learning Disability Practice, 14 (9):32–38.

Conference Publications • Marsh, L. McCarthy, M., Dalton, C., Caples, C., Windle, R and Laverty, H. ; (2011) Student generated Learning- Reusable Learning Objects as an active learning experience & resource. 11th Annual Nursing & Midwifery Research Conference University College Cork. • Marsh, L., McCarthy, M., Caples, M., Dalton, C., Windle, R. and Laverty, H. (2011). ; (2011) Show Me The Learning- Reusable Learning Objects as an active learning experience & resource. National Academy 5th Annual Conference & Galway Symposium on Higher Education Galway.

Day, Mary Rose

Peer Reviewed Journals • Day, M.R. McCarthy, G. & Leahy-Warren, P.; (2011) ‘Professional Social Workers’ Views on Self-Neglect: an exploratory Study’. British Journal of Social Work, :1–19. Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxxviii

Deady, Richard

Peer Reviewed Journals • Deady. R.; (2011) ‘Reading with methodological perspective bias: a journey into classical grounded theory’. The Grounded Theory Review: An International Journal, 10 (1):41–57.

Fehin, Patricia

Book Chapters • Creedon, R., McCarthy, J., Fehin, P. & McCarthy, B. ; (2011) ‘Professional, Ethical, Legal and Communication Aspects of Prescribing’ In: Creedon, R (Eds.). Foundations of Nurse Prescribing Education. Cork: Cork University Press.

Peer Reviewed Journals • Wills, T., Fehin, P. Callen, B; (2011) ‘Body Mass Index Knowledge of Older Adults and Motivation to Change’. British Journal of Community Nursing, 16 (3):110–115.

Conference Publications • Wills, T., Fehin, P., Callen, B. ; (2011) A Pilot Study to Explore the Knowledge of Older Adults about their Weight Status (BMI) International Research Conference, Royal College of Surgeons in Ireland.

• Wills, T., Fehin, P., Callen, B. ; (2011) Knowledge of Body Mass Index and Motivation to change in Irish and American Older Adults. University of Tennessee Medical Centre Nursing Research Day, United States of America.

Flynn, Angela

Conference Publications • Flynn, Angela (2011) Neoliberalism, misrecognition, maldistribution and health inequalities in Ireland: Rendering the older person invisible. Social Pathologies of Contemporary civilisation 2011–09–15- 2011–09–16. • Flynn, Angela (2011) Neoliberalism, misrecognition, maldistribution and health inequalities in Ireland: Rendering the older person invisible. Centre for Aging Research Development Ireland (CARDI).

Hartigan, Irene

Book Chapters • Murphy, S. Hartigan, I. Walshe, N. Barrett, T; (2011) ‘The development of a theoretical model of Integrative Learning for use in professional Return to programmes’ In: Flexible Learning: Proceedings of the National Academy’s Fourth Annual Conference. University College Cork: University College President’s Report Cork. UCC Research Publications 2011–2012 | College of Medicine and Health cxxix

Peer Reviewed Journals • Hartigan, I. Murphy, S. Hickey, M.; (2011) ‘Older adults knowledge of pressure ulcer prevention; a prospective quasi-experimental study’. International Journal of Older People Nursing.

• Hartigan, I. O’Connell,E. Mc Carthy, G. O’Mahony, D.; (2011) ‘First time stroke survivors perceptions of their health status and their goals for recovery: a qualitative descriptive study’. International Journal of Nursing and Midwifery, 3 (2):22–29. • O Connell Elizabeth and Hartigan, Irene; (2011) ‘Recognition of stroke symptoms by stroke survivors and reasons for delay in seeking medical treatment’. British Journal of Neuroscience Nursing, 7 (3):168–173. • Walshe, N., O’Brien, S., Murphy, S., Hartigan, I.; (2011) ‘Integrative Learning through Simulation and Problem Based Learning’. Clinical Simulation in Nursing.

Conference Publications • Hartigan, I & Mc Carthy, G.; (2011) Measuring Psychosocial Adaptation. College of Medicine and Health Annual Research Day. • Hartigan, I & Mc Carthy, G.; (2011) Measuring adaptation post stroke. Doctoral Showcase University College Cork University College Cork.

• Hartigan, I., O’Connell, E., Kilonzo, B., O’Brien, S., Mc Carthy, G & O’Mahony, D.; (2011) A Stroke of Success: exploring public knowledge of the warning signs of stroke prior to a nationwide education campaign. Rehabilitation and Therapy Research Society 7th Annual Conference: Fostering Clinical Research Partnerships.

• Hrtigan, I., O’Connell, E., O’Brien, S., Kilonzo, B., Mc Carthy, G. & O’Mahony, D.; (2011) A Stroke of Success: exploring public knowledge of the warning signs of stroke prior to a nationwide education campaign. 3rd International Nursing and Midwifery Conference, School of Nursing and Midwifery, NUI Galway.

• I Hartigan, S Murphy, N Walshe & S O’Brien ; (2011) Students perspectives of Problem-based Learning preceding Clinical Simulations in Nursing. International Facilitate Conference; A PBL Nework Trinity College Dublin. • I. Hartigan & G. McCarthy; (2011) Measuring Adaptation Post Stroke. PSI Division of Health Psychology, 8th Annual Psychology Health and Medicine Conference National University of Ireland, Galway. • I. Hartigan & G. McCarthy; (2011) Measuring Psychosocial Adaptation Post Stroke. 2nd Conference of Social Psychology in Ireland University of Limerick. • I. Hartigan & Professor G. McCarthy; (2011) Measuring Adaptation Post Stroke. Irish Heart Foundation Council on Stroke 14th Annual Stroke Conference.

• Imelda O’Connor, Irene Hartigan, Catherine Cahalane & Catherine McCarthy; (2011) An Evaluation of home visits by Cardiovascular Public Health from the patients perspective. 14th Annual Scientiﬁc Irish Nurses Cardiovascular Association Tullamore Court Hotel.

Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxxx

Hegarty, Josephine

Peer Reviewed Journals • Cleary, V; Hegarty, J; (2011) ‘Understanding sexuality in women with gynaecological cancer’. European Journal of Oncology Nursing, 15 (1):38–45. • Cleary, V; Hegarty, J; McCarthy, G; (2011) ‘Sexuality in Irish Women with Gynaecological Cancer’. Oncology Nursing Forum, 38 (2).

Horgan, Aine Mairead

Book Chapters • Horgan, A.; (2011) ‘Mental Health Concerns Regarding Adolescents’ In: Jones, J., Rogers, V., Fitzpatrick, J (Eds.). Psychiatric-Mental Health Nursing: An Interpersonal Approach to Professional Practice. New York: Springer.

Conference Publications • Horgan, A, Sweeney, J., MCCarthy, G. (2011) The effect of online peer support on depressive symptoms in university students. 11th Annual Research Conference. Catherine McAuley School of Nursing and Midwifery, University College Cork. • Horgan, A. & Sweeney, J.; (2011) The development of an online peer support intervention for young people experiencing depressive symptoms. 17th International Network for Psychiatric Nursing Research (NPNR) Conference Oxford, UK, 2011–09–28- 2011–09–29.

Kelleher, Sean Joseph

Peer Reviewed Journals • Kelleher, S; Dalton, C; (2011) ‘The Promotion of Nursing as a Career: A Discussion Paper’. Nursing Forum.

Leahy-Warren, Patricia

Peer Reviewed Journals • Aileen Burton, Ìrma Mikkonen, Catherine Buckley, Sile Creedon, Marja-Anneli Hynynen, Marit Kiljako, Lilija Kuzminskiene, Patricia Leahy-Warren, Inga Mikutaviciene, Seija Puputti, Vilma Rasteniene, Riita Riikonen, Piret Simm, ; (2011) ‘Ananalysis of the existing resources in relation to education and treatment of diabetes in four European countries: Estonia, Finland, Ireland, and Lithuania’. Applied Nursing Research, 24. • Burton, A,Mikkonen, I,Buckley, C,Creedon, S,Hynynen, MA,Kiljako, M,Kuzminskiene, L,Leahy-Warren, P,Mikutaviciene, I,Puputti, S,Rasteniene, V,Riikonen, R,Simm, P,Soovali, EM,Tiainen, AI,Vaisto, R; (2011) ‘Ananalysis of the existing resources in relation to education and treatment of diabetes in four European countries: Estonia, Finland, Ireland, and Lithuania’. Nursing Research, 24:118–123. • Day, M.R. McCarthy, G. & Leahy-Warren, P.; (2011) ‘Professional Social Workers’ Views on Self-Neglect: an exploratory Study’. British Journal of Social Work, :1–19. Return to President’s Report • Leahy-Warren, P. Corcoran, P.; (2011) ‘Care from health visitors trained in psychological intervention methods may prevent depression in mothers not depressed at 6 weeks postnatally’. Evidence Based Nursing, doi:10.1136/ebn.2011.100085. UCC Research Publications 2011–2012 | College of Medicine and Health cxxxi

• Leahy-Warren, P; McCarthy G; (2011) ‘Postnatal Depression in ﬁrst-time mothers: Prevalence and Relationships between functional and’. Archives of Psychiatric Nursing, 25 (3).

Conference Publications • Leahy-Warren, P. Mulcahy, H., Phelan, A.; (2011) Breastfeeding Supports for Mothers: Comparison between Public Health Nurses and Mothers’ perspectives. 3rd International Nursing & Midwifery Conference of the School of Nursing & Midwifery, NUIG. • Leahy-Warren, P., McCarthy, G., Corcoran, P. ; (2011) Postnatal Depression in First-Time Mothers: Prevalence and Relationships with Social Support. 3rd International Nursing & Midwifery Conference of the School of Nursing & Midwifery, NUIG. • Murphy, MM and Leahy Warren, P; (2011) First time mothers experience of professional breastfeeding support. In: Devane, Declan eds. Third International Nursing & Midwifery Conference, Building and Promoting Excellence in Practice NUIG, Galway, Ireland. • Phelan, A., O’Connell, R. Leahy-Warren, P, Mulcahy H, ; (2011) Women’s decisions and choices about breastfeeding in Ireland: What about WHO Recommendations? International Confederation of Midwives Triennial Congress. • Sheehan,O., Leahy-Warren, P (2011) Examining neonatal nurses knowledge of pain, attitudes to sucrose and use of sucrose during painful procedures in the NICU The 11th Annual Nursing & Midwifery Research Conference, UCC.

Lehane, Elaine

Peer Reviewed Journals • McHugh, S,Corrigan, M,Sheikh, A,Lehane, E,Tanner, W,Hill, A; (2011) ‘Factors Influencing Career Choice After Initial Training in Surgery’. Journal of Surgery, 35:487–492. • McHugh, SM,Corrigan, M,Morney, N,Sheikh, A,Lehane, E,Hill, ADK; (2011) ‘AQuantitative Assessment of Changing Trends in Internet Usage for Cancer Information’. Journal of Surgery, 35:253–257. • McHugh, SM,Corrigan, MA,Sheikh, A,Lehane, E,Broe, P,Hill, ADK; (2011) ‘Astudy of the factors influencing school-going students considering medical careers’. Rna-A Publication of The Rna Society, 9:191–194. • McHugh, SM; Corrigan, MA; Sheikh, A; Lehane E; et al ; (2011) ‘Will they stay or will they go — A Study Examining the Factors which Influence Career Choices after Initial Training in Surgery’. World Journal of Surgery, 35 (3):487–492. Return to President’s Report • Walsh, E. Lehane, E. ; (2011) ‘Anexploration of the relationship between adherence with dietary sodium restrictions and health beliefs regarding these restrictions in Irish patients receiving haemodialysis for end-stage renal disease’. Journal of Clinical Nursing, 20 (3/4):331–340. UCC Research Publications 2011–2012 | College of Medicine and Health cxxxii

Marsh, Lynne

Book Chapters • Dalton, C; Caples, M; Marsh, L; (2011) ‘Physical Health’ In: Atherton, H. and Crickmore, D (Eds.). Learning Disabilities- Towards Inclusion 6th Ed. Oxford: Elsevier. • Marsh, L., Dalton, C and Caples, M.; (2011) ‘Living with Down Syndrome’ In: Hallawells Case Studies in Learning Disabilities. London: McGraw- Hill Education.

Peer Reviewed Journals • Dalton, C., Caples M., & Marsh, L.; (2011) ‘Management of dysphagia’. Learning Disability Practice, 14 (9):32–38.

Conference Publications • Marsh, L. McCarthy, M., Dalton, C., Caples, C., Windle, R and Laverty, H. ; (2011) Student generated Learning- Reusable Learning Objects as an active learning experience & resourc. 11th Annual Nursing & Midwifery Research Conference University College Cork. • Marsh, L., McCarthy, M., Caples, M., Dalton, C., Windle, R. and Laverty, H. (2011). ; (2011) Show Me The Learning- Reusable Learning Objects as an active learning experience & resource. National Academy 5th Annual Conference & Galway Symposium on Higher Education Galway.

Mccarthy, Bridie

Mccarthy, Geraldine

Peer Reviewed Journals • Cleary, V,Hegarty, J,McCarthy, G; (2011) ‘Sexuality in Irish Women With Gynecologic Cancer’. Oncology Nursing Forum, 38:225–225.

• Cleary, V; Hegarty, J; McCarthy, G; (2011) ‘Sexuality in Irish Women with Gynaecological Cancer’. Oncology Nursing Forum, 38 (2). • Cornally, N,McCarthy, G; (2011) ‘Help-seeking behaviour: A concept analysis’. International Journal of Nursing Practice, 17:280–288.

• Cornally, N. McCarthy, G. ; (2011) ‘Help-seeking behaviour for the treatment of chronic pain’. British Journal of Community Nursing, 16 (2):90–98. • Cornally, N. McCarthy, G; (2011) ‘Chronic Pain: Help-Seeking Behaviour, attitudes, and Beliefs of Older Adults Living in the Community’. Pain Management Nursing. Return to President’s Report • Day, M.R. McCarthy, G. & Leahy-Warren, P.; (2011) ‘Professional Social Workers’ Views on Self-Neglect: an exploratory Study’. British Journal of Social Work, :1–19. UCC Research Publications 2011–2012 | College of Medicine and Health cxxxiii

• Hartigan, I. O’Connell,E. Mc Carthy, G. O’Mahony, D.; (2011) ‘First time stroke survivors perceptions of their health status and their goals for recovery: a qualitative descriptive study’. International Journal of Nursing and Midwifery, 3 (2):22–29. • Leahy-Warren, P; McCarthy G; (2011) ‘First-Time Mothers: Social Support, Maternal Parental Self-Efﬁcacy and Postnatal Depression’. Journal of Clinical Nursing. • Leahy-Warren, P; McCarthy G; (2011) ‘Postnatal Depression in ﬁrst-time mothers: Prevalence and Relationships between functional and’. Archives of Psychiatric Nursing, 25 (3).

• McCarthy, G. Cornally, N. Moran, J. Courtney, M.; (2011) ‘Practice Nurses and General Practitioners: perspectives on the role and future development of practice nursing in Ireland’. Journal of Clinical Nursing.

• McCluskey, P. McCarthy, G.; (2011) ‘Nurses knowledge and competence in wound Assessment and Management’. Wounds UK.

• Leahy-Warren, P., McCarthy, G., Corcoran, P. ; (2011) Postnatal Depression in First-Time Mothers: Prevalence and Relationships with Social Support. 3rd International Nursing & Midwifery Conference of the School of Nursing & Midwifery, NUIG.

Mccarthy, Joan

Books • McCarthy J; Donnelly M; Dooley D; Campbell L; Smith D; (2011) End-of-Life Care: Ethics and Law. Cork: Cork University Press.

Other Journals • McCarthy J; (2011) ‘Making Tough Decisions at the End of Life’ FEASA Newsletter of the All-Ireland Gerontological Nurses Association, 1 (3):21–22.

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Conference Publications • McCarthy, J (2011) Ethical challenges in end-of-life care: meeting diverse needs. 18th Annual Palliative Care Conference, Moving Points in Palliative Care Dublin, 2011–04–07- 2011–04–07.

• McCarthy, J (2011) Ethics and Decision-making in Dementia Care. The Future of Dementia Care Conference 2011- 12th October 2011, CORK. • McCarthy, J (2011) Revisiting the Person with Dementia or the Demented Person. 12th International ICNE Conference London, 2011–09–07- 2011–09–07.

Mulcahy, Helen

Peer Reviewed Journals • Mulcahy H. Phelan, A. Corcoran P. and Leahy-Warren P. (2011) ‘Examining the breastfeeding support resources of the public health nursing services in Ireland’. Journal of Clinical Nursing, 9 DEC 2011 | DOI: 10.1111/j.1365–2702.2011.03975.x.

Murphy, Margaret

Conference Publications • Murphy, MM and Leahy Warren, P; (2011) First time mothers experience of professional breastfeeding support. In: Devane, Declan eds. Third International Nursing & Midwifery Conference, Building and Promoting Excellence in Practice NUIG, Galway, Ireland.

Murphy, Siobhan

Book Chapters • Murphy, S. Hartigan, I. Walshe, N. Barrett, T; (2011) ‘The development of a theoretical model of Integrative Learning for use in professional programmes’ In: Flexible Learning: Proceedings of the National Academy’s Fourth Annual Conference. University College Cork: University College Cork.

Peer Reviewed Journals • Farrell, D. Murphy, S; (2011) ‘Negative Pressure Wound Therapy for Recurrent Pilonidal Disease: A Review of the Literature’. Journal of wound Return to President’s Report ostomy and continence nursing, 38 (4):1–6. UCC Research Publications 2011–2012 | College of Medicine and Health cxxxv

• Hartigan, I. Murphy, S. Hickey, M.; (2011) ‘Older adults knowledge of pressure ulcer prevention; a prospective quasi-experimental study’. International Journal of Older People Nursing. • Murphy, S. Conway, C. McGrath, N. O Leary, B. O Sullivan, M. O Sullivan, D.; (2011) ‘Nursing interventions in older adult patients after hip fracture repair’. Journal of Clinical Nursing. • Murphy. S; (2011) ‘Perioperative Nurses Contribution to Reducing Delerium in Hip Fractured Patients’. Irish Journal of Anaesthetic and Recovery Nursing, 5 (3):9–11. • O’ Connor, C. Murphy, S.; (2011) ‘Perioperative Nurses Perceptions of Pneumatic Tourniquet Use: A Focus Group Study’. Irish Journal of Anaesthetic and Recovery Nursing, 5 (3):21–23. • Walshe, N., O’Brien, S., Murphy, S., Hartigan, I.; (2011) ‘Integrative Learning through Simulation and Problem Based Learning’. Clinical Simulation in Nursing. Conference Publications • Hartigan, I. Murphy, S. Walshe, N. O’Brien, S.; (2011) Students perspectives of Problem Based Learning preceeding Clinical Simulation In Nursing. Facilitate International Conference; Problem Based Learning Today and Tomorrow Trinity College Dublin Ireland, 2011–05–26- 2011–05–27. Other • Murphy, S.; (2011) Poster Competition; Engaging undergraduate nursing students in research. Other. Noonan, Brendan

Peer Reviewed Journals • Niamh Garvey and Brendan Noonan; (2011) ‘Providing Individualised Education to patients post myocardial infarction: A Literature Review’. British Journal of Cardiac Nursing, 6 (2):73–79. O’Connell, Elizabeth

Book Chapters • Creedon, R. & O’ Connell, E. ; (2011) ‘Clinical pracricum in Nurse / Midwife Prescribing’ In: Rena Creedon (Eds.). Foundations of Nurse Prescribing Education. Cork: Cork University Press. Peer Reviewed Journals • Hartigan, I. O’Connell,E. Mc Carthy, G. O’Mahony, D.; (2011) ‘First time stroke survivors perceptions of their health status and their goals for recovery: a qualitative descriptive study’. International Journal of Nursing and Midwifery, 3 (2):22–29. • O Connell Elizabeth and Hartigan, Irene; (2011) ‘Recognition of stroke symptoms by stroke survivors and reasons for delay in seeking medical treatment’. British Journal of Neuroscience Nursing, 7 (3):168–173. Return to President’s Report • O Connell, Elizabeth, Sheahan, Orla; (2011) ‘Learning to Live with Hereditary Haemochromatosis: a Qualitative Descriptive Study’. Journal of Nursing and Healthcare of Chronic Illness, 3:257–264. UCC Research Publications 2011–2012 | College of Medicine and Health cxxxvi

Conference Publications • Hartigan, I., O’Connell, E., Kilonzo, B., O’Brien, S., Mc Carthy, G & O’Mahony, D.; (2011) A Stroke of Success: exploring public knowledge of the warning signs of stroke prior to a nationwide education campaign. Rehabilitation and Therapy Research Society 7th Annual Conference: Fostering Clinical Research Partnerships.

• O’Connell, E., Creedon, R., McCarthy, G. & Lehane, B.; (2011) Nurse prescribing: a literature review. The Inagural National Conference of Nurse and Midwife Prescribing UCC, 2011–09–09- 2011–09–09.

O’Connell, Rhona

Peer Reviewed Journals • Curtis, E and O’Connell, R.; (2011) ‘Essential leadership skills for motivating and developing staff’. Nursing management (Harrow, London, England: 1994), 18 (5):32–35.

• Kilonzo, B,O’Connell, R; (2011) ‘Secondary prevention and learning needs post percutaneous coronary intervention (PCI): perspectives of both patients and nurses’. Rna-A Publication of The Rna Society, 20:1160–1167. • Kilonzo, B., Hughes, M., O’Connell, R.; (2011) ‘Health Literacy and coronary heart disease: Implications for nurses’. British Journal of Cardiac Nursing, 6 (1):29–34. • O’Sullivan B, O’Connell R.; (2011) ‘Secondary prevention and learning needs of cardiac patients post percutaneous transluminal coronary angioplasty (PTCA): Perspectives of patients and nurses’. Journal of Clinical Nursing, 20 (7/8):1160–1167.

Conference Publications • O’Connell, R., Downe S, Dykes, F (2011) The size paradox enabling authentic midwifery to emerge. School of Nursing and Midwifery, Trinity College Dublin 12th Annual Interdisciplinary Research Conference. • Phelan, A., O’Connell, R. Leahy-Warren, P, Mulcahy H, ; (2011) Women’s decisions and choices about breastfeeding in Ireland: What about WHO Recommendations? International Confederation of Midwives Triennial Congress.

O’Connor, Caroline

Peer Reviewed Journals • O’ Connor, C. Murphy, S.; (2011) ‘Perioperative Nurses Perceptions of Pneumatic Tourniquet Use: A Focus Group Study’. Irish Journal of Anaesthetic and Recovery Nursing, 5 (3):21–23. Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxxxvii

O’Shea, Maria

Peer Reviewed Journals • Hayes,C and O’Shea,M (2011) ‘The unique preoperative needs of children’. Irish Journal of Anaesthetic and Recovery Nursing, 5 (13):14–19. • O’ Shea M., Cummins A. & Kelleher A. (2011) ‘The perceived effectiveness of a pre-admission visist for chilldren (and their prarents) undergoing day surgery procedures’. Journal of Perioperative Practice, 21 (7):244–248.

Other Journals • O’Shea,M. Hayes,C and Mulcair,S (2011) ‘Childhood vaccinations- parents questions answered’ Skills4Nurses, 24 :6–7.

Phelan, Agnes

• Phelan, A., O’Connell, R. Leahy-Warren, P, Mulcahy H, ; (2011) Women’s decisions and choices about breastfeeding in Ireland: What about WHO Recommendations? International Confederation of Midwives Triennial Congress.

Savage, Eileen

Book Chapters • Hegarty J. and Savage E. (2011) ‘Cochrane reviews’ In: Fitzpatrick J. and Wallace M (Eds.). Encyclopedia of Nursing Research. New York: Springer Publishing Co.

Peer Reviewed Journals • Koskinen L, Mikkonen I, Graham I, Norman LD, Richardson J, Savage E, Schorn M; (2011) ‘Advanced practice nursing for enduring health needs management: A global perspective’. Nurse Education Today.

• Landers M, McCarthy G, Savage E; (2011) ‘Bowel symptom experiences and management following sphincter saving surgery for rectal cancer: A qualitative perspective’. European Journal of Oncology Nursing.

• Savage E, Beirne PV, Ni Chroinin M, Duff A, Fitzgerald T, Farrell D; (2011) ‘Self-management education for cystic ﬁbrosis’. Cochrane Database of Systematic Reviews, (7).

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Sweeney, John F

Peer Reviewed Journals • Caroline Dalton and John Sweeney (2011) ‘Communication supports in residential services for people with an intellectual disabilitydisability’. British Journal of Learning Disabilities. • Sweeney, JF ; (2011) ‘The role of the Irish Division of the Royal Medico-Psychological Association in the Development of Intellectual Disability Nursing in Ireland’. Canadian Bulletin of Medical History, 28 (1):95–122. Wills, Teresa

Peer Reviewed Journals • Wills, T., Fehin, P. Callen, B; (2011) ‘Body Mass Index Knowledge of Older Adults and Motivation to Change’. British Journal of Community Nursing, 16 (3):110–115. Conference Publications • Wills, T. Bantry White, E. Ni Laoire, C. O’Connor, E., Cusack, S. & Haun, Y. (2011) Age, Income and Food in Ireland: A study of the socio-economic influences of food expenditure amongst community dwelling older people in Ireland. International Research Conference. • Wills, T. Bantry White, E. Ni Laoire, C., O’Connor, E.,Cusack, S., Huan, Y (2011) Age, Income and Food in Ireland: A study of the socio-economic influences of food expenditure amongst community dwelling older people in Ireland. Interdiscipinary Research Conference, Trinity College Dublin. • Wills, T. Fehin, P., Callen, B. (2011) Body Mass Index Knowledge of Irish and American Older Adults. Interdisciplinary Research Conference, Trinity College Dublin. • Wills, T., Fehin, P., Callen, B. ; (2011) A Pilot Study to Explore the Knowledge of Older Adults about their Weight Status (BMI) International Research Conference, Royal College of Surgeons in Ireland. • Wills, T., Fehin, P., Callen, B. ; (2011) Knowledge of Body Mass Index and Motivation to change in Irish and American Older Adults. University of Tennessee Medical Centre Nursing Research Day, United States of America. Published Reports • Bantry White, E., Ni Laoire, C., Wills, T., O’Connor, E., Cusack, S. & Huan, Y.; (2011) Age, Income and Food in Ireland: A study of the socio-economic influences of food expenditure amongst community-dwelling older people in Ireland. Centre for Ageing Research and Developments in Ireland. School of Pharmacy

Anita Maguire

Peer Reviewed Journals Return to President’s Report • Deane, FM; Miller, CM; Maguire, AR; McCarthy, FO; (2011) ‘Modiﬁcations to the Vilsmeier-Haack formylation of 1,4-dimethylcarbazole and its application to the synthesis of ellipticines’. Journal of Heterocyclic Chemistry, 48 (4):814–823. UCC Research Publications 2011–2012 | College of Medicine and Health cxxxix

• Debarge, S,Balzarini, J,Maguire, AR; (2011) ‘Design and Synthesis of alpha-Carboxy Phosphononucleosides’. The Journal of Organic Chemistry, 76:105–126. • Eccles, KS,Deasy, RE,Fabian, L,Maguire, AR,Lawrence, SE; (2011) ‘The Use of Co-crystals for the Determination of Absolute Stereochemistry: An Alternative to Salt Formation’. The Journal of Organic Chemistry, 76:1159–1162. • Eccles, KS,Stokes, SP,Daly, CA,Barry, NM,McSweeney, SP,O’Neill, DJ,Kelly, DM,Jennings, WB,Dhubhghaill, OMN,Moynihan, HA,Maguire, AR,Lawrence, SE; (2011) ‘Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist?’. Journal of Applied Crystallography, 44:213–215. • Eccles, Kevin S. and Deasy, Rebecca E. and Fabian, Laszlo and Braun, Doris E. and Maguire, Anita R. and Lawrence, Simon E. (2011) ‘Expanding the crystal landscape of isonicotinamide: concomitant polymorphism and co-crystallisation’. Crystal Engineering Communications, 13 (23):6923–6925. • Eccles,Kevin S.,Elcoate,Curtis J.,Maguire,Anita R.,Lawrence,Simon E. (2011) ‘Unzipping the Dimer in Primary Amides by Cocrystallization with Sulfoxides’. Crystal Growth & Design, 11 (10):4433–4439.

• Foley, David A. and Doecke, Christopher W. and Buser, Jonas Y. and Merritt, Jeremy M. and Murphy, Linda and Kissane, Marie and Collins, Stuart G. and Maguire, Anita R. and Kaerner, Andreas (2011) ‘ReactNMR and ReactIR as Reaction Monitoring and Mechanistic Elucidation Tools: The NCS Mediated Cascade Reaction of alpha-Thioamides to alpha-Thio-beta-chloroacrylamides’. Journal of Organic Chemistry, 76 (23):9630–9640.

• Kissane, M. and Murphy, M. and O’Brien, E. and Chopra, J. and Murphy, L. and Collins, S. G. and Lawrence, S. E. and Maguire, A. R.; (2011) ‘Addition-substitution reactions of 2-thio-3-chloroacrylamides with carbon, nitrogen, oxygen, sulfur and selenium nucleophiles’. Organic and Biomolecular Chemistry, 9:2452–2472.

• Kissane, Marie and Maguire, Anita R. (2011) ‘Stereoselective Synthesis of 2-Thio-3-Chloroacrylamides and Investigation of their Reactivity’. Synlett, (9):1212–1232. • Kissane, Marie and Murphy, Maureen and Bateman, Lorraine M. and McCarthy, Daniel G. and Maguire, Anita R. (2011) ‘Selective beta-oxidation of alpha-sulfanyl amides’. Tetrahedron, 67 (30):5494–5499. • McNamara, OA,Maguire, AR; (2011) ‘The norcaradiene-cycloheptatriene equilibrium’. Tetrahedron, 67:9–40.

• Metharom P, Martin K, Kumar AH, Sawhney N, Cronin MF, McCarthy DG, Maguire AR, Caplice NM; (2011) ‘Pleiotropic role for monocyte C-fms protein in response to vascular injury: Potential therapeutic target’. Atherosclerosis, 216 (1):74–82.

• O’Boyle NM, Vandermeersch T, Flynn CJ, Maguire AR, Hutchison GR; (2011) ‘Confab — Systematic generation of diverse low-energy conformers’. Journal of cheminformatics, 3. • O’Mahony, Graham E. and Kelly, Padraig and Lawrence, Simon E. and Maguire, Anita R. (2011) ‘Synthesis of enantioenriched sulfoxides’. Arkivoc, :1–110. • Rebecca E Deasy, Maude Brossat, Thomas S Moody and Anita R Maguire (2011) ‘Lipase catalysed kinetic resolutions of 3-aryl alkanoic acids’. Tetrahedron: Asymmetry, 22:47–61. • Slattery, Catherine N. and Maguire, Anita R. (2011) ‘Asymmetric copper-catalysed intramolecular C-H insertion reactions of alpha-diazo-beta-keto sulfones’. Organic & Biomolecular Chemistry, 9 (3):667–669. Byrne, Stephen

Book Chapters • Byrne S. & Clarke L.; (2011) ‘Poisons Act and Regulation’ In: Weedle, P. & Clarke, L (Eds.). Medicine and pharmacy law in Ireland. London: Pharmaceutical Press. • Byrne S. & Weedle P; (2011) ‘Methylated Sprits Legislation’ In: Weedle, P. & Clarke, L (Eds.). Medicine and pharmacy law in Ireland. London: Pharmaceutical Press. Peer Reviewed Journals • Hamilton, H,Gallagher, P,Ryan, C,Byrne, S,O’Mahony, D; (2011) ‘Potentially Inappropriate Medications Defined by STOPP Criteria and the Risk of Adverse Drug Events in Older Hospitalized Patients’. RN Journal, 171:1013–1019. • Murphy, M,Byrne, S,Bradley, CP (2011) ‘Influence of patient payment on antibiotic prescribing in Irish general practice: a cohort study’. Rna-A Publication of The Rna Society, 61:552–553. • O’Donovan, D. O.,Byrne, S.,Loughrey, M.,Browne, G.,Fitzgerald, T.,Perry, I.,Sahm, L. (2011) ‘P 1–284 Variation in estimated ten-year cardiovascular risk across four risk scoring tools in both a general population sample and an occupational setting’. Journal of Epidemiology and Community Health, 65. • O’Donovan, Dónal Óg; Sahm, Laura; Shannon, Nicola; Byrne, Stephen; (2011) ‘Comparing 2 Point-of-Care Testing Devices for Lipid Profiling’. Point of care: The Journal of Near-Patient Testing & Technology, 10 (1):22–24. • O’Donovan D óg, Byrne S, Browne G, Perry I and Sahm L; (2011) ‘Variation in estimated ten-year cardiovascular risk across four risk scoring tools in both a general population sample and an occupational setting’. Journal of Epidemiology and Community Health. • O’Donovan D óg, Byrne S, McGillicuddy A and Sahm L; (2011) ‘Examination of the precision of the Cholestech LDX® point-of-care testing device for lipid profiling’. Pharmacoepidemiology and Drug Safety, 20. • O’Donovan D óg, Byrne S, and Sahm L; (2011) ‘The role of pharmacists in control and management of type 2 Diabetes Mellitus; a review of the literature’. Journal of Diabetology, 1. Return to President’s Report • Óg O’Donovan, Donal, Byrne, Stephen,McGillicuddy, Aoife, Sahm Laura; (2011) ‘Precision of a Point of Care testing device for lipid profiling’. European Journal of Lipid Science and Technology. UCC Research Publications 2011–2012 | College of Medicine and Health cxli

Conference Publications • Murphy K, Sahm LJ, Lambert S and Byrne S; (2011) A survey of service-users attending Matt Talbot Services during 2009 and their use of alcohol. European Association of Clinical Pharmacy Dublin Ireland, 2011–10–19- 2011–10–21.

Published Reports • Byrne S, O’Mahony D., et al. ; (2011) An evaluation of the inappropriate prescribing in older residents in long term care facilities in the greater Cork and Northern Ireland regions using the STOPP and Beers’ criteria. Centre for Ageing Research and Development in Ireland (CARDI).

Crean, Abina

Peer Reviewed Journals • C. O’Sullivan, P. O’Hare, G. Byrne, L. O’Neill, K. B. Ryan and A. M. Crean; (2011) ‘AModiﬁed Surface on Titanium Deposited by a Blasting Process’. Coatings, 1 (1):53–71.

• John B. Carey, Frances E. Pearson, Anto Vrdoljak, Marie G. McGrath, Abina M. Crean, Patrick T. Walsh, Timothy Doody, Conor O’Mahony, Adrian V. S. Hill, Anne C. Moore; (2011) ‘Microneedle Array Design Determines the Induction of Protective Memory CD8+ T Cell Responses Induced by a Recombinant Live Malaria Vaccine in Mice’. PloS ONE, 6 (7).

• Rakesh Dontireddy, Abina M Crean; (2011) ‘Acomparative study of spray-dried and freeze-dried hydrocortisone/polyvinyl pyrrolidone solid dispersions’. Drug Development and Industrial Pharmacy. • Ring, DT,Oliveira, JCO,Crean, A; (2011) ‘Evaluation of the inﬂuence of granulation processing parameters on the granule properties and dissolution characteristics of a modiﬁed release drug’. Advanced Powder Technology, 22:245–252.

Other Journals • Robert Ahern, Abina Crean & Katie Ryan; (2011) ‘Dissolution enhancement of a poorly water soluble drug’ UKICRS Newsletter.

Conference Publications • D.T, Ring, J.C. Oliveira and A. Crean; (2011) Developing better process understanding; the role of the granulation process, materials properties and storage environment on drug release from a matrix tablet. 5th International Granulation Workshop. • F. F. Farag, M. I. Amaro, A.M. Healy, C. M. O’Driscoll, A. M. Crean; (2011) Stability of Salmon Calcitonin-Sugar Nanoporous Microparticles. 38th Annual Meeting of Controlled Release Society National Harbor, Maryland, U.S.A. • John B. Carey, Frances E. Pearson, Anto Vrdoljak, Abina M. Crean, Conor O’Mahony, Adrian V.S. Hill, Anne C. Moore; (2011) Immunization using Return to ImmuPatch Silicon Microneedle Arrays results in Enhanced T-cell and antibody responses compared to traditional immunization routes. 38th President’s Report Annual Meeting Controlled Release Society National Harbor, Maryland, U.S.A. UCC Research Publications 2011–2012 | College of Medicine and Health cxlii

• M.G. McGrath, C.O’Mahony, A. Vrdoljak, A.C. Moore, A.M. Crean; (2011) Design of Dissolvable Microneedles for Drug Delivery. 38th Annual Meeting Controlled Release Society National Harbor, Maryland, U.S.A. • R. J. Ahern, K. B. Ryan, A. M. Crean. (2011) Enhanced dissolution and stability properties of supercritical fluid processed fenofibrate-silica systems. 38th Annual Meeting and Exposition of the Controlled Release Society Maryland, U.S.A, July 2011, 2011–07–30- 2011–08–03. Griffin, Brendan

Peer Reviewed Journals • O’Brien FE, Dinan TG, Griffin BT, Cryan JF; (2011) ‘Interactions between antidepressants and P-glycoprotein at the blood-brain barrier: Clinical significance of in vitro and in vivo findings’. British Journal of Pharmacology. Mccarthy, Suzanne

Book Chapters • Gaughan,D; McCarthy,S. (2011) ‘Veterinary Medicines’ In: Peter Weedle and Leonie Clarke (Eds.). Pharmacy and Medicines Law in Ireland. London: Pharmaceutical Prescc. Peer Reviewed Journals • Sahm, LS;Wolf, MS; Curtis, LM; Behan, R; Brennan, M; Gallwey, H; McCarthy,S. (2011) ‘What’s in a label? An exploratory study of patient-centered drug instructions’. European Journal of Clinical Pharmacology. Conference Publications • Insuk, S; Banaschewski, T; Neubert, A; Murray, M; McCarthy, S; Wong, ICKW On behalf of the ADDUCE project (2011) The Attention Deficit Hyperactivity Disorder (ADHD) Data Source Inventory. Asian Conference on Pharmacoepidemiology, Beijing, China. • McCarthy, S; Wilton, L; Murray, M; Hodgkins, P; Asherson, P; Wong, ICK (2011) Persistence of pharmacological treatment into adulthood for ADHD patients who started treatment in childhood or adolescence in UK primary care. Asian Conference on Pharmacoepidemiology, Beijing, China. • McCarthy, S; Wilton, L; Murray, M; Hodgkins, P; Asherson, P; Wong, ICK. (2011) Persistence of pharmacological treatment into adulthood for ADHD patients who started treatment in childhood or adolescence in UK primary care. International Society of Pharmacovigilance Annual Meeting, Istanbul, Turkey. • McCarthy, S; Wilton, L; Murray, M; Hodgkins, P; Asherson, P; Wong, ICK. (2011) The epidemiology of pharmacologically-treated attention deficit hyperactivity disorder (ADHD) in children, adolescents and adults in UK primary care. International Society of Pharmacovigilance Annual Meeting, Istanbul, Turkey. • McCarthy,S; Wilton, L; Murray, M; Hodgkins, P; Asherson, P; Wong ICK (2011) The epidemiology of pharmacologically-treated attention deficit hyperactivity disorder (ADHD) in children, adolescents and adults in UK primary care. Asian Conference on Pharmacoepidemiology, Beijing, China. Return to President’s Report • Sahm, L; Wolf, M; Curtis, L; Behan, R; Brennan, M; Gallwey, H; McCarthy,S. (2011) What’s in a Label? An Exploratory Study of Patient-Centered Drug Instructions in Ireland. International Conference on Communication in Healthcare, Chicago, USA. UCC Research Publications 2011–2012 | College of Medicine and Health cxliii

O’Driscoll, Caitriona

Peer Reviewed Journals • Jianfeng Guo, Ludovic Bourre, Declan M. Soden, Gerald C. O’Sullivan, Caitriona O’Driscoll; (2011) ‘Can non-viral technologies knockdown the barriers to siRNA delivery and achieve the next generation of cancer therapeutics?’. Biotechnology Advances, 29 (4):402–417. • Martin J. O’Neill, Ludovic Bourre, Silvia Melgar, and Caitriona M. O’Driscoll.; (2011) ‘Intestinal Delivery of Non-viral Gene Therapeutics- Physiological Barriers & Pre-clinical Models’. Drug Discovery Today. • Martin J. O’ Neill, Jianfeng Guo, Colin Byrne, Raphael Darcy and Caitriona M. O’ Driscoll; (2011) ‘Mechanistic studies on the uptake and intracellular trafﬁcking of novel cyclodextrin transfection complexes by intestinal epithelial cells’. International Journal of Pharmaceutics, 413 (1–2):174–183.

O’Leary, Olivia

Peer Reviewed Journals • O’Leary OF, O’Connor RM, Cryan JF; (2011) ‘Lithium-induced effects on adult hippocampal neurogenesis are topographically segregated along the dorso-ventral axis of stressed mice’. Neuropharmacology. • Savignac HM, Finger BC, Pizzo RC, O’Leary OF, Dinan TG, Cryan JF; (2011) ‘Increased sensitivity to the effects of chronic social defeat stress in an innately anxious mouse strain’. Neuroscience, 192:524–536.

Conference Publications • Felice D, O’Leary OF, Bettler B, Cryan JF; (2011) The role of GABAB(1) receptor subunits in the modulation of early life stress on anxiety and depression-related behaviour in adulthood. Anxiety and Depression, 21st Neuropharmacology Conference, Virginia, USA. • Felice D, O’Leary OF, Pizzo RC, Cryan JF; (2011) Adult hippocampal neurogenesis is increased by a GABAB receptor antagonist: Relevance to antidepressant action. Neuropharmacology Conference, Virginia, USA, November 10–11. • O’Leary OF, Savignac HM, Felice D., Bettler B., Cryan JF; (2011) GABAB(1) receptor isoforms confer differential susceptibility to the effects of social defeat stress. Anxiety and Depression, 21st Neuropharmacology Conference, Virginia, USA. • O’Leary OF, Zandy S, Dinan TG and Cryan JF; (2011) Increased hippocampal cell proliferation as a molecular mechanism for the therapeutic efﬁcacy of adjunctive lithium therapy in treatment-resistant depression. The International College of Neuropsychopharmacology (CINP) thematic meeting: Polypharmacy: The Good, The Bad and The Ugly, Salzburg, Austria. • O’Leary OF, Zandy S, Dinan TG, Cryan JF; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases adult hippocampal neurogenesis in a mouse model of treatment resistance. Anxiety and Depression, 21st Neuropharmacology Conference, Virginia, USA. • O’Leary OF, Zandy S, Dinan TG, and Cryan JF ; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases hippocampal neurogenesis in a model of treatment-resistant depression. European Behavioural Pharmacology society, Amsterdam. Return to President’s Report • O’Leary OF, Zandy S, Dinan TG, and Cryan JF; (2011) Increased hippocampal cell proliferation as a molecular mechanism for the therapeutic efﬁcacy of adjunctive lithium therapy in treatment-resistant depression. Wiring the brain: Making connections, Wicklow, Ireland. UCC Research Publications 2011–2012 | College of Medicine and Health cxliv

O’Sullivan, Tim

Book Chapters • Hardgaden GC, O’Sullivan TP (2011) ‘Di-t-butylchlorosilane’ In: Philip L. Fuchs (Eds.). Handbook of Reagents for Organic Synthesis, Reagents for Silicon-Mediated Organic Synthesis. Chichester: Wiley.

Peer Reviewed Journals • Börgeson E, Docherty NG, Murphy M, Rodgers K, Ryan R, O’Sullivan TP, Guiry PJ, Goldschmeding R, Higgins DF, Godson C; (2011) ‘Lipoxin A4 and benzo-lipoxin A4 attenuate experimental renal ﬁbrosis’. The FASEBJ Journal, 25 (9):2967–2979.

Conference Publications • Kate O’Reilly and Timothy P. O’Sullivan (2011) Towards an enantioselective systhesis of Plakortide P and its application towards drug development. XXth Conference of the Groupement des Pharmacochimistes de l’Arc Atlantique Cork.

Ryan, Katie

Other Journals • Robert Ahern, Abina Crean & Katie Ryan; (2011) ‘Dissolution enhancement of a poorly water soluble drug’ UKICRS Newsletter.

Conference Publications • A. Moore, T. Doody, R. Macloughlin, K. B. Ryan, 2011, (2011) Evaluation of Nanoparticle Pulmonary Delivery using Aerogen’s Nebuliser Device — An in-vivo Approach. 4th NanoBioEurope Conference Cork, Ireland, 2011–06–21- 2011–06–23. • R. J. Ahern, K. B. Ryan, A. M. Crean. (2011) Enhanced dissolution and stability properties of supercritical ﬂuid processed fenoﬁbrate-silica systems. 38th Annual Meeting and Exposition of the Controlled Release Society Maryland, U.S.A, July 2011, 2011–07–30- 2011–08–03.

Sahm, Laura Jane

Book Chapters • Gallagher P, Sahm L and Clarke L. ; (2011) ‘Prescription and control of supply of medicines’ In: Pharmacy and Medicines Law in Ireland. London: Return to Pharmaceutical Press. President’s Report • Sahm L and Weedle P; (2011) ‘Misuse of drugs acts and regulations’ In: Pharmacy and Medicines Law in Ireland. London: Pharmaceutical Press. UCC Research Publications 2011–2012 | College of Medicine and Health cxlv

Peer Reviewed Journals • O’Donovan, D. O.,Byrne, S.,Loughrey, M.,Browne, G.,Fitzgerald, T.,Perry, I.,Sahm, L. (2011) ‘P 1–284 Variation in estimated ten-year cardiovascular risk across four risk scoring tools in both a general population sample and an occupational setting’. Journal of Epidemiology and Community Health, 65.

• O’Donovan, Dónal Óg; Sahm, Laura; Shannon, Nicola; Byrne, Stephen; (2011) ‘Comparing 2 Point-of-Care Testing Devices for Lipid Proﬁling’. Point of care: The Journal of Near-Patient Testing & Technology, 10 (1):22–24.

• O’Donovan D óg, Byrne S, Browne G, Perry I and Sahm L; (2011) ‘Variation in estimated ten-year cardiovascular risk across four risk scoring tools in both a general population sample and an occupational setting’. Journal of Epidemiology and Community Health.

• O’Donovan D óg, Byrne S, McGillicuddy A and Sahm L; (2011) ‘Examination of the precision of the Cholestech LDX® point-of-care testing device for lipid proﬁling’. Pharmacoepidemiology and Drug Safety, 20. • O’Donovan D óg, Byrne S, and Sahm L; (2011) ‘The role of pharmacists in control and management of type 2 Diabetes Mellitus; a review of the literature’. Journal of Diabetology, 1. • Sahm L, Gallwey H, Brennan M, Behan R and Mc Carthy S; (2011) ‘Enhanced Prescription Label Design to improve Patients Understanding of their Medication’. International Journal of Pharmacy Practice, 19 (S1):44–44.

• Sahm L, Quinn L, Madden M, Richards HL (2011) ‘Does satisfaction with information equate to better anticoagulant control?’. International Journal of Clinical Pharmacy, 33 (3):543–548.

• Sahm LJ, Wolf MS, Curtis LM, Behan R, Brennan M, Gallwey H and McCarthy S (2011) ‘What’s in a label? An exploratory study of patient-centred drug instructions’. European Journal of Clinical Pharmacology. • Sahm, L,Quinn, L,Madden, M,Richards, HL; (2011) ‘Does satisfaction with information equate to better anticoagulant control?’. Rna-A Publication of The Rna Society, 33:543–548. • Óg O’Donovan, Donal, Byrne, Stephen,McGillicuddy, Aoife, Sahm Laura; (2011) ‘Precision of a Point of Care testing device for lipid proﬁling’. European Journal of Lipid Science and Technology.

Conference Publications • A Joy, L Sahm, J Mathers, S OFlynn, D Kerins; (2011) Interprofessional Ward-based Teamwork To Enable Safe Prescribing Practice in Healthcare Undergraduates. ASME Annual Scientiﬁc Meeting, 13–15 July 2011, RCPE, Edinburgh, UK. • Murphy K, Sahm LJ, Lambert S and Byrne S; (2011) A survey of service-users attending Matt Talbot Services during 2009 and their use of alcohol. European Association of Clinical Pharmacy Dublin Ireland, 2011–10–19- 2011–10–21. • Sahm LJ, Wolf MS, Curtis LM, Behan R, Brennan M, Gallwey H and McCarthy S; (2011) What’s in a label? An Exploratory Study of Patient-Centred Drug Instructions in Ireland. 2011 International Conference on Communication in Healthcare, Chicago, 2011–10–16- 2011–10–19. Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxlvi

University Dental School and Hospital

Allen, Edith

Peer Reviewed Journals • Allen EM, Matthews JB, O’ Halloran DJ, Grifﬁths HR, Chapple IL.; (2011) ‘Oxidative and inﬂammatory status in Type 2 diabetes patients with periodontitis’. Jnl. Clinical Periodontology, 38(10):894–901. • Pennington M, Heasman P, Gaunt F, Güntsch A, Ivanovski S, Imazato S, Rajapakse S, Allen E, Flemmig T, Sanz M, Vernazza C.; (2011) ‘The cost-effectiveness of supportive periodontal care: a global perspective’. Jnl. Clinical Periodontology, Jun;38(6):553–61.

Allen, Finbarr

Peer Reviewed Journals • Allen PF, McKenna G, Creugers N; (2011) ‘Prosthodontics for older patients’. Dental Update, 38:460–470.

• Durham J, Steele JG, Wassell RW, Exley CE, Meechan JG, Allen F, Moufti MA (2011) ‘Creating a condition-specific Temporomandibular disorders’ quality of life measure: A modified method’. Journal of Oral Rehabilitation, 38:871–883. • Howard-Bowles E, McKenna G, Allen PF; (2011) ‘Anevidence based approach for the provision of resin-bonded bridgework’. European Journal of Prosthodontics and Restorative Dentistry, 19 (3):99–104. • Locker D, Tsakos G, Steele JG, Allen PF (2011) ‘Minimum standards for collection and reporting of oral health related quality of life (OHRQOL) data’. Community Dentistry and Oral Epidemiology. • Moufti MA, Wassell RW, Meechan JG, Allen PF, John MT, Steele JG (2011) ‘The Oral Health Impact Profile (OHIP) of temporomandibular disorders’. European Journal of Oral Sciences, 119:169–174.

• McKenna G, Allen PF, O’Mahony D, Flynn A, DaMata C, Cronin M, Woods N; (2011) ‘Impact of tooth replacement strategies on the nutritional status of partially dentate elders’. Gerodontology.

• McKenna G, Allen PF, Woods N, O’Mahony D, DaMata C, Cronin M, Flynn A, Normand C (2011) ‘Apreliminary report of the cost-effectiveness of tooth replacement strategies for partially dentate elders’. Gerodontology. • Meaney S, Anweigi L, Ziada H, Allen F. (2011) ‘The impact of hypodontia: a qualitative study on the experiences of patients’. The European Journal of Orthodontics, Jun 21. [Epub ahead of print]. • Murphy, C,Kearns, G,Sleeman, D,Cronin, M,Allen, PF; (2011) ‘The clinical relevance of orthognathic surgery on quality of life’. Journal of Surgery, 40:926–930.

Return to President’s Report UCC Research Publications 2011–2012 | College of Medicine and Health cxlvii

Conference Publications • C Da Mata, PF.Allen, N.Woods, D. O’Mahony, M.Cronin.; (2011) Atraumatic Restorative Treatment and Conventional Restorations: A cost-effectiveness analysis. 89th General Session and Exhibition of the International association for Dental Research, San Diego Convention Center, San Diego, California, USA, 2011–03–16- 2011–03–19. • G. McKenna, N. Woods, PF. Allen, D. O’Mahony, M. Cronin, C. Normand.; (2011) Cost effectiveness of tooth replacement strategies for partially dentate elders. 89th General Session and Exhibition of the International Association for Dental Research, San Diego Convention Center, San Diego, California, USA, 2011–03–16- 2011–03–19. • McKenna G, Allen PF, Flynn A, O’Mahony D, Cronin M, Woods N; (2011) Comparison of tooth replacement strategies on the nutritional status of older patients: A randomised controlled clinical trial. 7th Congress of the EUGMS.

Burke, Francis M

Peer Reviewed Journals • Burke FM, McKenna G; (2011) ‘Toothwear and the Older Patient’. Dental Update, 38:165–168. • Hatherell S, Lynch CD, Burke FM, Ericson D, Gilmour ASM (2011) ‘Attitudes of final year dental students to bleaching of vital and non-vital teeth in Cardiff, Cork, and Malmö’. Journal of Oral Rehabilitation, 38:263–269. • Honey J, Lynch CD, Burke FM, Gilmour ASM. (2011) ‘Ready for practice? A study of confidence levels of final year dental students at Cardiff University and University College Cork’. European Journal of Dental Education, 15:98–103. • McKenna J, McKenna G, Ray N, Burke FM (2011) ‘The Effect of Variability in the Powder/Liquid Ratio on the Strength of Zinc Phosphate Cement’. International Journal of Dentistry, 2011:1–4. • da Mata C, McKenna G, Burke FM (2011) ‘Caries and the Older Patient’. Dental Update, 38:376–381.

Conference Publications • Buckley N, Ray N, Burke FM (2011) Light curing tip contamination and surface hardness of resin composite. Irish Division, International Association for Dental Research. • Kelleher M, McKenna G, Burke FM, Madden J (2011) Patterns of dental attendance and attitudes of general practice patients in Galway. Irish Division International Association for Dental Research.

Curtin, Sharon

Peer Reviewed Journals • Curtin S. & Hammond S.; (2011) ‘Placing Dental Clinicians within the normative base regarding Vicarious Response’. European Journal of Dental Return to Education. President’s Report • Curtin S. & McConnell M.; (2011) ‘Teaching Dental Students how to Deliver Bad News: SPIKES model’. Journal of Dental Education. UCC Research Publications 2011–2012 | College of Medicine and Health cxlviii

Other Journals • Curtin S, Ray N; (2011) ‘Prospective Dental students offered invaluable insight’.

Conference Publications • Curtin, S. & Hammond, S.; (2011) CVRS: A research tool to evaluate emotional responsivity in Dentistry. IADR Irish Division.

Kinirons, Martin J

Peer Reviewed Journals • Stewart C, Kinirons M, Delaney P; (2011) ‘Clinical audit of children with permanent tooth injuries treated at a dental hospital in Ireland’. European archives of paediatric dentistry: ofﬁcial journal of the European Academy of Paediatric Dentistry, 12 (1):41–45.

Mccreary, Christine

Peer Reviewed Journals • McCartan, BE,Healy, CM,McCreary, CE,Flint, SR,Rogers, S,Toner, ME; (2011) ‘Characteristics of patients with orofacial granulomatosis’. Oral Diseases, 17:696–704. • McCreary C, Ní Ríordaín R; (2011) ‘Oral Medicine and the Elderly’. Dental Update, 38:30–36.

• Ni Riordain R, McCreary C; (2011) ‘Further reliability and responsiveness of the Chronic Oral Mucosal Diseases Questionnaire’. Oral Diseases. • Ní Ríordáin R, McCreary C; (2011) ‘Validity and reliability of a newly developed quality of life questionnaire for patients with chronic oral mucosal diseases’. Journal of Oral Pathology and Medicine, Epub ahead of print. • Ní Ríordáin R, Meaney S, McCreary C; (2011) ‘APatient-Centred Approach to Developing a Quality of Life Questionnaire for Chronic Oral Mucosal Diseases’. Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontology, 111 (5):578–586.

• Ní Ríordáin R, O’Sullivan K, McCreary C; (2011) ‘Retrospective Evaluation of the Referral Pattern to an Oral Medicine Unit in Ireland’. Community Dental Health, 28:107–110.

Mckenna, Gerald J

Peer Reviewed Journals • Allen PF, McKenna G, Creugers N; (2011) ‘Prosthodontics for older patients’. Dental Update, 38:460–470. • Burke FM, McKenna G; (2011) ‘Toothwear and the Older Patient’. Dental Update, 38:165–168.

Return to • Curtin S, Ray N, McKenna G, Burke FM (2011) ‘Areport to support career choice in dentistry’. Journal of the Irish Dental Association. President’s Report • DaMata C, McKenna G, Burke FM; (2011) ‘Caries and the older patient’. Dental Update, 38:376–381. UCC Research Publications 2011–2012 | College of Medicine and Health cxlix

• Guiney H; McKenna G; Whelton H; O’Mullane D; (2011) ‘Is the shortened dental arch an underused treatment strategy in the Republic of Ireland? Supplementary analyses from the 2000/02 national survey of adult oral health’. Community Dental Health, 28 (4):265–268. • Howard-Bowles E, McKenna G, Allen PF; (2011) ‘Anevidence based approach for the provision of resin-bonded bridgework’. European Journal of Prosthodontics and Restorative Dentistry, 19 (3):99–104. • McKenna G, Allen PF, O’Mahony D, Flynn A, DaMata C, Cronin M, Woods N; (2011) ‘Impact of tooth replacement strategies on the nutritional status of partially dentate elders’. Gerodontology. • McKenna G, Allen PF, Woods N, O’Mahony D, DaMata C, Cronin M, Flynn A, Normand C (2011) ‘Apreliminary report of the cost-effectiveness of tooth replacement strategies for partially dentate elders’. Gerodontology. • McKenna G; (2011) ‘Do removable dental prosthesis have an impact on tooth loss?’. Evidence Based Dentistry, 12 (1):14–15. • McKenna J, Ray N, McKenna G, Burke FM; (2011) ‘The effect of variability in the powder/liquid ratio on the strength of zinc phosphate cement’. International Journal of Dentistry, 2011 (679315):1–4.

Other Journals • McKenna G, Rosenberg B, Van Heumen C (2011) ‘Simple tooth replacement using ﬁbre reinforced composite resin’ Irish Dentist, 2011 :11–14.

Conference Publications • G. McKenna, N. Woods, PF. Allen, D. O’Mahony, M. Cronin, C. Normand.; (2011) Cost effectiveness of tooth replacement strategies for partially dentate elders. 89th General Session and Exhibition of the International Association for Dental Research, San Diego Convention Center, San Diego, California, USA, 2011–03–16- 2011–03–19. • McKenna G, Allen P F, Woods N; (2011) Cost effectiveness of tooth replacement strategies for partially dentate elders. In: Journal of Dental Research 2011; 90: Abstract No 2913 eds. IADR General Session, 2011. • McKenna G, Allen PF, Flynn A, O’Mahony D, Cronin M, Woods N; (2011) Comparison of tooth replacement strategies on the nutritional status of older patients: A randomised controlled clinical trial. 7th Congress of the EUGMS.

Millett, Declan

Book Chapters • Millett DT, ; (2011) ‘Orthodontics: Principles and Practice’ In: Gill DS (Eds.). Class II division 2 malocclusion, Orthodontics: Principles and Practice. UK: George Warman Publications.

Peer Reviewed Journals • Campbell CM, Millett DT, O’Callaghan A, Marsh A, McIntyre GT, Cronin M; (2011) ‘The effect of increased overjet on the magnitude and reproducibility of smiling in adult females’. The European Journal of Orthodontics. Return to President’s Report • Cunningham S, Bearn D, Benson P, Johal A, Millett D, O’Brien K, Luther F; (2011) ‘In search of the sample: recent experiences of a trial team in orthodontics’. Contemporary Clinical Trials, 32 (4):530–534. UCC Research Publications 2011–2012 | College of Medicine and Health cl

• Meade MJ and Millett DT (2011) ‘Anaudit of the caries status of patients about to start orthodontic treatment’. Irish Dental Association Journal, (57):156–160. • Millett D T (2011) ‘Bias in systematic reviews?’. Journal of Orthodontics, 38:158–160. • Millett DT (2011) ‘WBAs in postgraduate orthodontic education’. Journal of Orthodontics, (38):240–242. • Millett, Declan T. and Mandall, Nicky A. and Mattick, Rye C. R. and Hickman, Joy and Glenny, Anne-Marie; (2011) ‘Adhesives for bonded molar tubes during ﬁxed brace treatment’. Cochrane Database of Systematic Reviews, (6). • O’Mahony, G,Millett, DT,Barry, MK,McIntyre, GT,Cronin, MS; (2011) ‘Tooth size discrepancies in Irish orthodontic patients among different malocclusion groups’. Angle Orthodontist, 81:130–133. Ni Riordain, Richeal

Peer Reviewed Journals • McCreary C, Ní Ríordaín R; (2011) ‘Oral Medicine and the Elderly’. Dental Update, 38:30–36. • Ni Riordain R, McCreary C; (2011) ‘Further reliability and responsiveness of the Chronic Oral Mucosal Diseases Questionnaire’. Oral Diseases. • Ni Riordain R, Moloney E, O’Sullivan K, McCreary C; (2011) ‘Validity and reliability of patient-centered outcome measures in oral dysaesthesia’. Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontology. • Ní Ríordáin R, McCreary C; (2011) ‘Validity and reliability of a newly developed quality of life questionnaire for patients with chronic oral mucosal diseases’. Journal of Oral Pathology and Medicine, Epub ahead of print. • Ní Ríordáin R, Meaney S, McCreary C; (2011) ‘APatient-Centred Approach to Developing a Quality of Life Questionnaire for Chronic Oral Mucosal Diseases’. Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontology, 111 (5):578–586. • Ní Ríordáin R, O’Sullivan K, McCreary C; (2011) ‘Retrospective Evaluation of the Referral Pattern to an Oral Medicine Unit in Ireland’. Community Dental Health, 28:107–110. • Schleyer T, Mattsson U, Ní Ríordáin R, Brailo V, Glick M, Zain RB, Jontell M; (2011) ‘Advancing oral medicine through informatics and information technology: a proposed framework and strategy’. Oral Diseases, 17:85–94. O’Sullivan, Eleanor

Peer Reviewed Journals • O’Sullivan, E.M. (2011) ‘Dental Health of Irish Alcohol/Drug Abuse Treatment Centre Residents’. Community Dental Health: Journal of the British Association for the Study of Community Dentistry and the European Association of Dental Public Health. • O’Sullivan, EM; (2011) ‘Prevalence of oral mucosal abnormalities in addiction treatment centre residents in Southern Ireland’. Oral Oncology, European J Cancer. Return to President’s Report • O’Sullivan, EM; (2011) ‘Using epidemiological surveillance systems and routine data sets to study place of care and place of death: strengths and weaknesses’. Palliative Medicine. UCC Research Publications 2011–2012 | College of Medicine and Health cli

Ray, Noel

Peer Reviewed Journals • Curtin S, Ray N, McKenna G, Burke FM (2011) ‘Areport to support career choice in dentistry’. Journal of the Irish Dental Association. • Curtin, S., Ray, N.J., Mc Kenna, G. & Burke, F.M.; (2011) ‘Areport on an innovative workshop to support career choice in Dentistry for prospective students as University College Cork’. Journal of the Irish Dental Association.

• McKenna J, McKenna G, Ray N, Burke FM (2011) ‘The Effect of Variability in the Powder/Liquid Ratio on the Strength of Zinc Phosphate Cement’. International Journal of Dentistry, 2011:1–4.

Other Journals • Curtin S, Ray N; (2011) ‘Prospective Dental students offered invaluable insight’.

Conference Publications • Buckley N, Ray N, Burke FM (2011) Light curing tip contamination and surface hardness of resin composite. Irish Division, International Association for Dental Research.

• J Brown, E Higgins, N Ray, D Millett; (2011) Digital Photographic Assessment of Dimensional Integrity of Gypsum Models. 87th Congress of the European Orthodontic Society.

Stewart, Christopher

Whelton, Helen

Book Chapters • Whelton H; (2011) ‘Nutritional and Health-Promoting Properties of Dairy Products:’ In: Encyclopedia of Dairy Sciences 2nd Edition. London: Academic Press.

Peer Reviewed Journals • Bartlett, D,Harding, M,Sherriff, M,Shirodaria, S,Whelton, H; (2011) ‘Anew index to measure tooth wear — methodolgy and practical advice’. Community Dental Health, 28:182–187.

Return to • Browne D, Whelton H, O’Mullane D, Tavener J, Flannery E; (2011) ‘The aesthetic impact of enamel ﬂuorosis on Irish adolescents’. Community President’s Report Dentistry and Oral Epidemiology. UCC Research Publications 2011–2012 | College of Medicine and Health clii

• Guiney H., Woods N., Whelton H., Morgan N. (2011) ‘Predictors of utilisation of dental care services in a nationally representative sample of adults’. Community Dental Health, 28 (4):269–273. • Guiney H; McKenna G; Whelton H; O’Mullane D; (2011) ‘Is the shortened dental arch an underused treatment strategy in the Republic of Ireland? Supplementary analyses from the 2000/02 national survey of adult oral health’. Community Dental Health, 28 (4):265–268. • Guiney, H,Woods, N,Whelton, H,Mullane, DO; (2011) ‘Non-biological factors associated with tooth retention in Irish adults’. Community Dental Health, 28:53–59.

• Rethman MP, Beltrán-Aguilar ED, Billings RJ, Hujoel PP, Katz BP, Milgrom P, Sohn W, Stamm JW, Watson G, Wolff M, Wright JT, Zero D, Aravamudhan K, Frantsve-Hawley J, Meyer DM + Collaborators (2011) ‘ADA Council on Scientiﬁc Affairs Expert Panel on Nonﬂuoride Caries-Preventive Agents. Executive summary of evidence-based clinical’. Jnl. the American Dental Association, 142 (9):1065–1071.

Conference Publications • Whelton H (2011) Salivary ﬂuoride levels as a measurement of compliance with oral health promotion. European Organisation for Caries Research.

Ziada, Hassan

Peer Reviewed Journals • Meaney S, Anweigi L, Ziada H, Allen F. (2011) ‘The impact of hypodontia: a qualitative study on the experiences of patients’. The European Journal of Orthodontics, Jun 21. [Epub ahead of print].

Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cliii

College of Science, Engineering, and Food Science

Abcrf

Bateman, Lorraine

Peer Reviewed Journals • Kissane, Marie; Murphy, Maureen; Bateman, Lorraine M.; McCarthy, Daniel G.; Maguire, Anita R. (2011) ‘Selective β-oxidation of α-sulfanyl amides’. Tetrahedron, 67 (30):5494–5499.

O’Boyle, Noel

Edited Books • Noel M O’Boyle (Ed.). (2011) Open Babel — Ofﬁcial User Guide, Raleigh: Lulu Press, Inc.

• O’Boyle, NM,Campbell, CM,Hutchison, GR; (2011) ‘Computational Design and Selection of Optimal Organic Photovoltaic Materials’. Journal of Physical Chemistry C, 115:16200–16210.

• O’Boyle, NM; Banck, M; James, CA; Morley, C; Vandermeersch, T; Hutchison, GR (2011) ‘Open Babel: An open chemical toolbox’. Journal of cheminformatics, 3. • O’Boyle, NM; Guha, R; Willighagen, EL; Adams, SE; Alvarsson, J; Bradley, JC; Filippov, IV; Hanson, RM; Hanwell, MD; Hutchison, GR; James, CA; Jeliazkova, N; Lang, ASID; Langner, KM; Lonie, DC; Lowe, DM; Pansanel, J; Pavlov, D; Spjuth, O; Steinbeck, C; Tenderholt, AL; Theisen, KJ; Murray-Rust, P (2011) ‘Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk ﬁve years on’. Journal of cheminformatics, 3.

• O’Boyle, NM (2011) Improving the quality of chemical databases with community-developed tools (and vice versa). 5th Meeting on US Government Chemical Databases and Open Chemistry, Frederick (Maryland), US, 2011–08–25- 2011–08–26.

• O’Boyle, NM (2011) The Blue Obelisk community. Visions of a Semantic Molecular Future — A symposium to celebrate the career of Peter Return to Murray-Rust Cambridge, UK, 2011–01–17- 2011–01–17. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cliv

Published Reports • Noel M O’Boyle; (2011) Review of Data Analysis with Open Source Tools by Philipp K Janert. BioMedCentral. Biochemistry

Baranov, Pavel

Peer Reviewed Journals • Baranov PV, Wills NM, Barriscale KA, Firth AE, Jud MC, Letsou A, Manning G, Atkins JF (2011) ‘Programmed ribosomal frameshifting in the expression of the regulator of intestinal stem cell proliferation, adenomatous polyposis coli (APC)’.RNA biology, 8 (4):637–647. • Gurvich OL, Nävall SJ, Baranov PV, Björk GR, Atkins JF (2011) ‘Two groups of phenylalanine biosynthetic operon leader peptides genes: a high level of apparently incidental frameshifting in decoding Escherichia coli pheL’.Nucleic Acids Research, 39 (8):3079–3092. • Ivanov IP, Firth AE, Michel AM, Atkins JF, Baranov PV (2011) ‘Identiﬁcation of evolutionarily conserved non-AUG-initiated N-terminal extensions in human coding sequences’. Nucleic Acids Research, 39 (10):4220–4234. • Kiran A, Loughran G, O’Mahony JJ, Baranov PV (2011) ‘Identiﬁcation of A-to-I RNA editing: dotting the i’s in the human transcriptome’. Biochemistry. Biokhimiia, 76 (8):915–923. • Sharma V, Firth AE, Antonov I, Fayet O, Atkins JF, Borodovsky M, Baranov PV (2011) ‘Apilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment’. Molecular Biology and Evolution, 28 (11):3195–3211. Cotter, Thomas

Peer Reviewed Journals • Alvira, D,Naughton, R,Bhatt, L,Tedesco, S,Landry, WD,Cotter, TG; (2011) ‘Inhibition of Protein-tyrosine Phosphatase 1B (PTP1B) Mediates Ubiquitination and Degradation of Bcr-Abl Protein’. The Journal of Biological Chemistry, 286:32313–32323. • Donovan, M,Doonan, F,Cotter, TG; (2011) ‘Differential roles of ERK1/2 and JNK in retinal development and degeneration’. Journal of Neurochemistry, 116:33–42. • Doonan, F,O’Driscoll, C,Kenna, P,Cotter, TG; (2011) ‘Enhancing survival of photoreceptor cells in vivo using the synthetic progestin Norgestrel’. Journal of Neurochemistry, 118:915–927. • Farrell SM, Groeger G, Bhatt L, Finnegan S, O’Brien CJ, Cotter TG; (2011) ‘bFGF-mediated redox activation of the PI3K/Akt pathway in retinal photoreceptor cells’. The European Journal of Neuroscience, 33 (4):632–641. • Guerin, MB,Donovan, M,McKernan, DP,O’Brien, CJ,Cotter, TG; (2011) ‘Age-dependent rat retinal ganglion cell susceptibility to apoptotic stimuli: implications for glaucoma’. Ophthalmology, 39:243–251. Return to President’s Report • O’Driscoll, C,Doonan, F,Sanvicens, N,Messeguer, A,Cotter, TG; (2011) ‘Anovel free radical scavenger rescues retinal cells in vivo’. Experimental Eye Research, 93:65–74. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clv

Mccaffrey, Mary

Peer Reviewed Journals • Horgan CP, Hanscom SR, McCaffrey MW; (2011) ‘Dynein LIC1 localizes to the mitotic spindle and midbody and LIC2 localizes to spindle poles during cell division’. Cell biology international, 35 (2):171–178. • Horgan, CP,McCaffrey, MW (2011) ‘Rab GTPases and microtubule motors’. Biochemical Society Transactions, 39:1202–1206.

• Kelly EE, Horgan CP, McCaffrey MW, Young P; (2011) ‘The role of endosomal-recycling in long-term potentiation’. Cellular and Molecular Life Sciences, 68 (2):185–194.

• Lindsay, AJ,McCaffrey, MW; (2011) ‘Myosin Va Is Required for P Body but Not Stress Granule Formation’. The Journal of Biological Chemistry, 286:11519–11528.

O’Connor, Rosemary

• Neasta J, Kiely PA, He DY, Adams DR, O’Connor R, Ron D (2011) ‘Direct interaction between the scaffolding proteins RACK1 and 14–3-3ζ regulates brain-derived neurotrophic factor (BDNF) transcription’. The Journal of Biological Chemistry.

• O’Sullivan JF, Leblond AL, Kelly G, Kumar AH, Metharom P, BÃ¼neker CK, Alizadeh-Vikali N, Hristova I, Hynes BG, O’Connor R, Caplice NM (2011) ‘Potent long-term cardioprotective effects of single low-dose insulin-like growth factor-1 treatment postmyocardial infarction’. Circulation. Cardiovascular interventions, 4 (4):327–335. • Zhdanov AV, Favre C, O’Flaherty L, Adam J, O’Connor R, Pollard PJ, Papkovsky DB (2011) ‘Comparative bioenergetic assessment of transformed cells using a cell energy budget platform’. Integrative biology: quantitative biosciences from nano to macro, 3 (11):1135–1142.

Papkovsky, Dmitri

Book Chapters • Alice Zitova, Greg Jasionek, Dmitri B. Papkovsky; (2011) ‘Water toxicity monitoring using optical oxygen sensing and respirometry’ In: Fernando S. García Einschlag (Eds.). Waste Water — Evaluation And Management. www.intechopen.com: InTech Open Access Publisher.

Peer Reviewed Journals • Borchert, NB,Ponomarev, GV,Kerry, JP,Papkovsky, DB; (2011) ‘O2/pH Multisensor Based on One Phosphorescent Dye’. Analytical Chemistry, Return to President’s Report 83:18–22. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clvi

• Fercher A, Borisov SM, Zhdanov AV, Klimant I, Papkovsky DB; (2011) ‘Intracellular o(2) sensing probe based on cell-penetrating phosphorescent nanoparticles’. ACS Nano, 5 (7):5499–5508. • Hempel A, Borchert N, Walsh H, Roy Choudhury K, Kerry JP, Papkovsky DB; (2011) ‘Analysisof total aerobic viable counts in raw fish by high-throughput optical oxygen respirometry’. Journal of Food Protection, 74 (5):776–782. • Zhdanov, AV,Dmitriev, RI,Papkovsky, DB; (2011) ‘Bafilomycin A1 activates respiration of neuronal cells via uncoupling associated with flickering depolarization of mitochondria’. Cellular and Molecular Life Sciences, 68:903–917.

Sheehan, David

• Tyther, R., McDonagh, B. and Sheehan D (2011) ‘Proteomics in investigation of protein nitration in kidney disease: Technical challenges and perspectives from the spontaneously hypertensive rat’. Mass Spectrometry Reviews, 30:121–141.

Young, Paul

Peer Reviewed Journals • Flynn, M,Saha, O,Young, P; (2011) ‘Molecular evolution of the LNX gene family’. BMC Evolutionary Biology, 11. • Heimer-McGinn, V; Young, P; (2011) ‘Efﬁcient inducible pan-neuronal cre-mediated recombination in SLICK-H transgenic mice’. Genesis.

• Kelly EE, Horgan CP, McCaffrey MW, Young P; (2011) ‘The role of endosomal-recycling in long-term potentiation’. Cellular and Molecular Life Sciences, 68 (2):185–194.

Chemistry

Anita Maguire

• Debarge, S,Balzarini, J,Maguire, AR; (2011) ‘Design and Synthesis of alpha-Carboxy Phosphononucleosides’. The Journal of Organic Chemistry, 76:105–126. Return to • Eccles, KS,Deasy, RE,Fabian, L,Maguire, AR,Lawrence, SE; (2011) ‘The Use of Co-crystals for the Determination of Absolute Stereochemistry: An President’s Report Alternative to Salt Formation’. The Journal of Organic Chemistry, 76:1159–1162. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clvii

• Eccles, KS,Stokes, SP,Daly, CA,Barry, NM,McSweeney, SP,O’Neill, DJ,Kelly, DM,Jennings, WB,Dhubhghaill, OMN,Moynihan, HA,Maguire, AR,Lawrence, SE; (2011) ‘Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist?’. Journal of Applied Crystallography, 44:213–215.

• Eccles, Kevin S. and Deasy, Rebecca E. and Fabian, Laszlo and Braun, Doris E. and Maguire, Anita R. and Lawrence, Simon E. (2011) ‘Expanding the crystal landscape of isonicotinamide: concomitant polymorphism and co-crystallisation’. Crystal Engineering Communications, 13 (23):6923–6925. • Eccles,Kevin S.,Elcoate,Curtis J.,Maguire,Anita R.,Lawrence,Simon E. (2011) ‘Unzipping the Dimer in Primary Amides by Cocrystallization with Sulfoxides’. Crystal Growth & Design, 11 (10):4433–4439. • Fabian,Laszlo,Hamill,Noel,Eccles,Kevin S.,Moynihan,Humphrey A.,Maguire,Anita R.,McCausland,Linda,Lawrence,Simon E. (2011) ‘Cocrystals of Fenamic Acids with Nicotinamide’. Crystal Growth & Design, 11 (8):3522–3528. • Foley, David A. and Doecke, Christopher W. and Buser, Jonas Y. and Merritt, Jeremy M. and Murphy, Linda and Kissane, Marie and Collins, Stuart G. and Maguire, Anita R. and Kaerner, Andreas (2011) ‘ReactNMR and ReactIR as Reaction Monitoring and Mechanistic Elucidation Tools: The NCS Mediated Cascade Reaction of alpha-Thioamides to alpha-Thio-beta-chloroacrylamides’. Journal of Organic Chemistry, 76 (23):9630–9640. • Kissane, M. and Murphy, M. and O’Brien, E. and Chopra, J. and Murphy, L. and Collins, S. G. and Lawrence, S. E. and Maguire, A. R.; (2011) ‘Addition-substitution reactions of 2-thio-3-chloroacrylamides with carbon, nitrogen, oxygen, sulfur and selenium nucleophiles’. Organic and Biomolecular Chemistry, 9:2452–2472. • Kissane, Marie and Maguire, Anita R. (2011) ‘Stereoselective Synthesis of 2-Thio-3-Chloroacrylamides and Investigation of their Reactivity’. Synlett, (9):1212–1232.

• Kissane, Marie and Murphy, Maureen and Bateman, Lorraine M. and McCarthy, Daniel G. and Maguire, Anita R. (2011) ‘Selective beta-oxidation of alpha-sulfanyl amides’. Tetrahedron, 67 (30):5494–5499.

• McNamara, OA,Maguire, AR; (2011) ‘The norcaradiene-cycloheptatriene equilibrium’. Tetrahedron, 67:9–40. • Metharom P, Martin K, Kumar AH, Sawhney N, Cronin MF, McCarthy DG, Maguire AR, Caplice NM; (2011) ‘Pleiotropic role for monocyte C-fms protein in response to vascular injury: Potential therapeutic target’. Atherosclerosis, 216 (1):74–82. • Milner, Sinead Eileen and Brunton, Nigel Patrick and Jones, Peter Wyn and O’Brien, Nora Mary and Collins, Stuart Gerard and Maguire, Anita Rose (2011) ‘Bioactivities of Glycoalkaloids and Their Aglycones from Solanum Species’. Journal of Agricultural and Food Chemistry, 59 (8):3454–3484.

• Mitchell, David and Coppert, David M. and Moynihan, Humphrey A. and Lorenz, Kurt T. and Kissane, Marie and McNamara, Orla A. and Maguire, Anita R. (2011) ‘APractical Synthesis of Biaryls via a Thermal Decarboxylative Pd-Catalyzed Cross-Coupling Reaction Operating at Moderate Temperature’. Organic Process Research & Development, 15 (5):981–985.

• O’Boyle NM, Vandermeersch T, Flynn CJ, Maguire AR, Hutchison GR; (2011) ‘Confab — Systematic generation of diverse low-energy conformers’. Journal of cheminformatics, 3.

• O’Mahony, Graham E. and Kelly, Padraig and Lawrence, Simon E. and Maguire, Anita R. (2011) ‘Synthesis of enantioenriched sulfoxides’. Arkivoc, Return to :1–110. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clviii

• Rebecca E Deasy, Maude Brossat, Thomas S Moody and Anita R Maguire (2011) ‘Lipase catalysed kinetic resolutions of 3-aryl alkanoic acids’. Tetrahedron: Asymmetry, 22:47–61. • Slattery, Catherine N. and Maguire, Anita R. (2011) ‘Asymmetric copper-catalysed intramolecular C-H insertion reactions of alpha-diazo-beta-keto sulfones’. Organic & Biomolecular Chemistry, 9 (3):667–669.

Collins, Stuart

Peer Reviewed Journals • Collins, Stuart G.; O’Sullivan, Orlagh C.M.; Kelleher, Patrick G.; Maguire, Anita R. (2011) ‘Design and Synthesis of Stable α-Diazosulfoxides’. Journal of Organic Chemistry. • Foley, David A. and Doecke, Christopher W. and Buser, Jonas Y. and Merritt, Jeremy M. and Murphy, Linda and Kissane, Marie and Collins, Stuart G. and Maguire, Anita R. and Kaerner, Andreas (2011) ‘ReactNMR and ReactIR as Reaction Monitoring and Mechanistic Elucidation Tools: The NCS Mediated Cascade Reaction of alpha-Thioamides to alpha-Thio-beta-chloroacrylamides’. Journal of Organic Chemistry, 76 (23):9630–9640. • Hladezuk, Isabelle; Chastagner, Veronique; Collins, Stuart G.; Plunkett, Stephen J.; Ford, Alan; Debarge, Sebastien; Maguire, Anita R. (2011) ‘Development of O-H insertion for the attachment of phosphonates to nucleosides; Synthesis of α—carboxy phosphononucleosides’. Tetrahedron. • Kissane, M. and Murphy, M. and O’Brien, E. and Chopra, J. and Murphy, L. and Collins, S. G. and Lawrence, S. E. and Maguire, A. R.; (2011) ‘Addition-substitution reactions of 2-thio-3-chloroacrylamides with carbon, nitrogen, oxygen, sulfur and selenium nucleophiles’. Organic and Biomolecular Chemistry, 9:2452–2472. • Milner, Sinead Eileen and Brunton, Nigel Patrick and Jones, Peter Wyn and O’Brien, Nora Mary and Collins, Stuart Gerard and Maguire, Anita Rose (2011) ‘Bioactivities of Glycoalkaloids and Their Aglycones from Solanum Species’. Journal of Agricultural and Food Chemistry, 59 (8):3454–3484.

Fitzpatrick, Dara

Book Chapters • C. M. M. Smith, D. Fitzpatrick, and J. D. Glennon; (2011) ‘Atomic Spectrometric Techniques’ In: John W. Fuquay, Patrick F. Fox and Paul L. H. McSweeney (Eds.). Encyclopedia of Dairy Sciences. United States: Academic Press.

Glennon, Jeremy

Peer Reviewed Journals • J.O. Omamogho, J.P. Hanrahan, J. Tobin, J.D. Glennon (2011) ‘Structural variation of solid core and thickness of porous shell of 1.7 mu core-shell silica particles on chromatographic performance: Narrow bore columns’. Journal of Chromatography A, 1218 (15):1942–1953. • Omamogho Jesse O.; Glennon Jeremy D. (2011) ‘Comparison between the Efﬁciencies of sub-2 mu m C(18) Particles Packed in Narrow Bore Columns’. Analytical Chemistry, 83 (5):1547–1556. Return to President’s Report • Scully N. M.; Ashu-Arrah B. A.; Nagle A. P.; et al. (2011) ‘Silica hydride intermediate for octadecylsilica and phenyl bonded phase preparation via heterogeneous hydrosilation in supercritical carbon dioxide’. Journal of Chromatography A, 1218 (15):1974–1982. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clix

• Zhou, L., Glennon, J.D., Luong, J.H.T., Reen, F.J., O’Gara, F., McSweeney, C., and McGlacken, G.P.; (2011) ‘Detection of the Pseudomonas Quinolone Signal (PQS) by cyclic voltammetry and amperometry using a boron doped diamond electrode’. Chemical Communications, 47 (37):10347–10349.

Other Journals • M. Vázquez, D. Brabazon, F. Shang, J.O. Omamogho, J.D. Glennon, B. Paull. (2011) ‘Centrifugally-driven sample extraction, preconcentration and puriﬁcation in microﬂuidic compact discs’ Trends in Analytical Chemistry (TrAC), 30 (10):1575–1586.

Healy, David

Peer Reviewed Journals • Healy, D.; Hellebust, S.; Silvari, V.; Lopez, J.; Whittaker, A.; Wenger, J.; Heffron, J.; Sodeau, J.; (2011) ‘Using a pattern recognition approach to link inorganic chemical ﬁngerprints of ambient PM2.5–0.1 with in vitro biological effects’. DOI 10.1007/s11869–010–0120–5. • Kourtchev, I.; Hellebust, S.; Bell, J. M.; O’Connor, I. P.; Healy, R. M.; Allanic, A.; Healy, D.; Wenger, J. C.; Sodeau, J. R.; (2011) ‘The use of polar organic compounds to estimate the contribution of domestic solid fuel combustion and biogenic sources to ambient levels of organic carbon and PM2.5 in Cork Harbour, Ireland’. Science of the Total Environment, 409 (11):2143–2155.

Published Reports • Connor, I. P., Healy, D. A., Allanic, A., Hellebust, S., Bell, J., Cashman, S., Sodeau. J.; (2011) Toxicological Analysis and Chemical Correlation for PM2.5 in transit to Cobh (TACCo). EPA.

• Ian P. O’ Connor, I. P., Allanic, A., Hellebust, S., Kourtchev, I., Healy, R. M., Healy, D. A., Bell, J., Wenger J. C., and Sodeau. J.; (2011) Composition and Sources of Particulate Air Pollution in a Port Environment, Cork, Ireland. EPA.

Healy, Robert

Peer Reviewed Journals • Clifford, GM; Hadj-Aissa, A; Healy, RM; Mellouki, A; Munoz, A; Wirtz, K; Martin Reviejo, M; Borras, E; Wenger, JC; (2011) ‘The Atmospheric Photolysis of o-Tolualdehyde’. Environmental Science & Technology. • Healy, RM; Sciare, J; Poulain, L; Kamili, K; Merkel, M; Müller, T; Wiedensohler, A; Eckhardt, S; Stohl, A; Sarda-Estève, R; McGillicuddy, E; O’Connor, IP; Sodeau, JR; Wenger, JC; (2011) ‘Sources and mixing state of size-resolved elemental carbon particles in a European megacity: Paris’. Atmospheric Chemistry and Physics Discussions, 11:30333–30380. • Kourtchev, I.; Hellebust, S.; Bell, J. M.; O’Connor, I. P.; Healy, R. M.; Allanic, A.; Healy, D.; Wenger, J. C.; Sodeau, J. R.; (2011) ‘The use of polar organic compounds to estimate the contribution of domestic solid fuel combustion and biogenic sources to ambient levels of organic carbon and PM2.5 in Cork Harbour, Ireland’. Science of the Total Environment, 409 (11):2143–2155.

Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clx

Holmes, Justin D.

Peer Reviewed Journals • Arnold, D. C.; Blake, A.; Iacopino, D.; Tobin, J. M.; O’Mahony, C.; Holmes, J. D.; Morris, M. A. ; (2011) ‘Planarized and nanopatterned mesoporous silica thin ﬁlms by chemical mechanical polishing of gap-ﬁlled topographically patterned substrates’. Ieee Transactions On Nanotechnology, 10:451–461.

• Barth, S.; Boland, J. J.; Holmes, J. D.; (2011) ‘Defect Transfer from Nanoparticles to Nanowires’. Nano Letters, 11:1550–1555. • Barth, S.; Kazakova, O.; Estrade, S.; Hobbs, R. G.; Peiro, F.; Morris, M. A.; Holmes. J. D. (2011) ‘Synthesis and magnetic characterization of co-axial Ge1-xMnx/a-Si heterostructures’. Crystal Growth and Design, 11:5253–5259.

• Barth, S.; Kole±nik, M.; Donegan, K.; Krsti∆c, V.; Holmes, J. D.; (2011) ‘Diameter-controlled solid-phase seeding of germanium nanowires: structural characterization and electrical transport properties’. Chemistry of Materials, 23:3335–3340.

• Burke, D. M.; O’Byrne, J.; Fleming, P. G.; Borah, D.; Morris, M. A.; Holmes, J. D.; (2011) ‘Carbon nanocages as heavy metal ion adsorbents’. Desalination, 280:87–94. • Chen, L.; Holmes, J. D.; Ramírez-García, S.; Morris, M. A. ; (2011) ‘Facile synthesis of monodisperse ZnO nanocrystals by direct liquid phase precipitation’. Journal of Nanomaterials, 2011:853832(1)-853832(9). • Chen, L.; Xu, J.; Zhang, W.-H.; Holmes, J. D.; Morris, M. A.; (2011) ‘Syntheses of complex mesoporous silicas using mixtures of nonionic block copolymer surfactants: Understanding formation of different structures using solubility parameters’. Journal of Colloid and Interface Science, 353:169–180. • Collins, G. Holmes, J. D.; (2011) ‘Chemical functionalisation of silicon and germanium nanowires’. Journal of Materials Chemistry, 21:11052–11069.

• Delaney, P.; McManamon, C.; Hanrahan, J. P.; Copley, M. P.; Holmes, J. D.; Morris, M. A.; (2011) ‘Development of chemically engineered porous metal oxides for phosphate removal’. Journal of Hazardous Materials, 185:382–391. • Donegan, K. P.; Godsell, J. F.; Tobin, J. M.; O’Byrne, J. P.; Otway, D. J.; Morris, M. A.; Roy, S.; Holmes, J. D.; (2011) ‘Microwave-assisted synthesis of icosahedral nickel nanocrystals’. CrystEngComm, 3:2023–2028. • Farrell, R. A.; Kehagias, N.; Shaw, M. T.; Reboud, V.; Zelsmann, M.; Holmes, J. D.; Sotomayor-Torres, Morris, M. A.; (2011) ‘Surface-directed dewetting of a block copolymer for fabricating highly uniform nanostructured microdroplets and concentric nanorings’. Acs Nano, 5:1073–1085.

Return to • Fleming, P. G.; Holmes, J. D.; Otway, D. J.; Morris, M. A.; (2011) ‘The complex synthesis and solid state chemistry of ceria-lanthana solid solutions President’s Report prepared via a hexamethylenetetramine precipitation’. Journal of Solid State Chemistry, 184:2595–2600. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxi

• Fleming, P. G.; Ramirez, S.; Holmes, J. D.; Morris, M. A.; (2011) ‘AnXPS study of the oxidation of reduced ceria-lanthana nanocrystals’. Chemical Physics Letters, 509:51–57. • Fois, G.; Bolger, C. T.; Holmes, J. D.; Cross, G; (2011) ‘Proximal oxidation as a director of self organisation’. Journal of Materials Chemistry, 21:8772–8780. • Jung, S.J.; Lutz, T.; Boese, M; Holmes, J. D.; Boland, J. J.; (2011) ‘Surface energy driven agglomeration and growth of single crystal metal wires’. Nano Letters, 11:1294–1299.

• Mokarian-Tabari, P, Collins, T.; Holmes, J. D.; Morris, M. A.; (2011) ‘Cyclical ‘ﬂipping of morphology in block copolymer ﬁlms’. Acs Nano, 5:4617–4623.

• O’Byrne, J. P.; Li, Z.; Jones, S. L. T.; Fleming, P. G.; Larsson, J. A.; Morris. M. A.; Holmes, J. D. (2011) ‘Nitrogen-doped carbon nanotubes: growth, mechanism and structure’. Chemphyschem, 12:2995–3001.

• Collins, G.; Fleming, P.; O’Dwyer, C.; Morris, M. A.; Holmes, J. D.; (2011) Functionalization of germanium nanowires. ECS Transactions Montreal, Canada, 2011–05–01- 2011–05–06.

• Glynn,C.; Lotty,O.; McSweeney, W.; Holmes, J. D.; O’Dwyer, C. ; (2011) Raman scattering spectroscopy of metal-assisted chemically etched rough nanowires. ECS Transactions Montreal, Canada, 2011–05–01- 2011–05–06. • McSweeney, W.; Lotty, O.; Holmes, J. D.; O’Dwyer, C. (2011) ‘Fabrication and characterization of single-crystal metal-assisted chemically etched rough Si nanowires for lithium-ion battery anodes. ECS Transactions Montreal, Canada, 2011–05–01- 2011–12–06. • Rahme, K.; Doody, T.; Jain, A. K.; Chen ,L.; Morris, M. A.; O’Driscoll, C.; Holmes, J. D. (2011) Synthesis and stabilisation of poly(ethylene glycol)-coated gold nanoparticles for siRNA delivery. Nanomaterials.

Jennings, William B.

Keating, J J

Return to Book Chapters President’s Report • Steven B Kayne (2011) In: An Introduction to Veterinary Medicine. UK: Satire Books. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxii

Peer Reviewed Journals • Yvonne M. McNamara, Suzanne M. Cloonan, John J. Keating, Stephen G. Butler, Günther H. Peters, Mary J. Meegan and D. Clive Williams (2011) ‘Synthesis and serotonin transporter activity of 1,3-bis(aryl)-2-nitro-1-propenes as a new class of anticancer agents’. Bioorganic and Medicinal Chemistry, 19:1328–1348.

Bill/Resolution • Members of the Department of Health and Children Designer Drug Committee (2011) Irish Statutory Instrument S.I. 551–553/2011. Bill/Resolution.

Lawrence, Simon

Peer Reviewed Journals • Eccles,Kevin S., Deasy,Rebecca E., Fabian,Laszlo, Maguire,Anita R., Lawrence,Simon E. (2011) ‘The Use of Co-crystals for the Determination of Absolute Stereochemistry: An Alternative to Salt Formation’. Journal of Organic Chemistry, 76 (4):1159–1162. • Eccles,Kevin S.,Deasy,Rebecca E.,Fabian,Laszlo,Braun,Doris E.,Maguire,Anita R.,Lawrence,Simon E. (2011) ‘Expanding the crystal landscape of isonicotinamide: concomitant polymorphism and co-crystallisation’. CrystEngComm, 13 (23):6923–6925.

• Eccles,Kevin S.,Elcoate,Curtis J.,Maguire,Anita R.,Lawrence,Simon E. (2011) ‘Unzipping the Dimer in Primary Amides by Cocrystallization with Sulfoxides’. Crystal Growth & Design, 11 (10):4433–4439.

• Eccles,Kevin S.,Stokes,Stephen P.,Daly,Carla A.,Barry,Nicola M.,McSweeney,Sharon P.,O’Neill,Damian J.,Kelly,Dawn M.,Jennings,W. Brian,Dhubhghaill,O. M. Ni,Moynihan,Humphrey A.,Maguire,Anita R.,Lawrence,Simon E. (2011) ‘Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist’. Journal of Applied Crystallography, 44 (1).

• O’Mahony, GE,Kelly, P,Lawrence, SE,Maguire, AR; (2011) ‘Synthesis of enantioenriched sulfoxides’. Arkivoc, :1–110. • Paluch,Krzysztof J.,Tajber,Lidia,Elcoate,Curtis J.,Corrigan,Owen I.,Lawrence,Simon E.,Healy,Anne Marie. (2011) ‘Solid-state characterization of novel active pharmaceutical ingredients: Cocrystal of a salbutamol hemiadipate salt with adipic acid (2:1:1) and salbutamol hemisuccinate salt’. Return to Journal of Pharmaceutical Sciences, 100 (8):3268–3283. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxiii

Mccarthy, Florence

Conference Publications • Elaine C. O’Sullivan, Charlotte M. Miller, Ken Devine and Florence O. McCarthy. ; (2011) Synthesis and evaluation of novel Ellipticine derivatives as anti-cancer agents. XXth Conference of the Groupement des Pharmacochimistes de l’Arc Atlantique. • Hannah J. Winﬁeld, Michael M. Cahill, Larry T. Pierce, Florence O. McCarthy; (2011) Synthesis of novel functionalised imidazoles as potential anticancer agents. XXth Conference of the Groupement des Pharmacochimistes de l’Arc Atlantique. • Kieran Greaney and Florence O. McCarthy; (2011) Synthesis of Novel Quinoxalines as Potential HIV Integrase Inhibitors (Bio)Pharmaceutical and Pharmacological Sciences (BPS) Conference Dublin City University, Dublin, 2011–01–11- 2011–01–11. • Michael M. Cahill, Larry T. Pierce, Hannah J. Winﬁeld, Florence O. McCarthy; (2011) Anticancer activity of novel azaindole derivatives related to the bisindolemaleimides. XXth Conference of the Groupement des Pharmacochimistes de l’Arc Atlantique.

Mcglacken, Gerard P.

Peer Reviewed Journals • F.J. Reen, M.J. Mooij, L.J. Holcombe, C.M. McSweeney, G.P. McGlacken, J.P. Morrissey and F. O’Gara; (2011) ‘The Pseudomonas Quinolone Signal (PQS), and its precursor HHQ, modulate interspecies and interkingdom behaviour’. FEMS Microbiol Ecol. • Gerard P. McGlacken and Sarah L. Clarke; (2011) ‘Alkoxy–arene cleavage using Ni catalysis’. ChemCatChem. • Zhou, L., Glennon, J. D., Luong, J. H. T., Reen, F. J., O’Gara, F., McSweeney, C. and McGlacken, G. P. (2011) ‘Detection of Pseudomonas Quinolone Signal (PQS) by cyclic voltammetry and amperometry using a boron doped diamond electrode’. Chem. Commun.

Moynihan, Humphrey

Peer Reviewed Journals • Eccles, KS,Stokes, SP,Daly, CA,Barry, NM,McSweeney, SP,O’Neill, DJ,Kelly, DM,Jennings, WB,Dhubhghaill, OMN,Moynihan, HA,Maguire, AR,Lawrence, SE; (2011) ‘Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist?’. Journal of Applied Crystallography, 44:213–215. Return to President’s Report • Fabian, Laszlo; Hamill, Noel; Eccles, Kevin; Moynihan, H.; Maguire, Anita; McCausland, Linda; Lawrence, Simon E; (2011) ‘Cocrystals of fenamic acids with nicotinamide’. Crystal Growth and Design, 11:3522–3528. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxiv

Ni Dhubhghaill, Orla

Omamogho, Jesse

Peer Reviewed Journals • Gritti, F,Omamogho, J,Guiochon, G (2011) ‘Kinetic investigation of narrow-bore columns packed with prototype sub-2 mu m superﬁcially porous particles with various shell thickness’. Journal of chromatography. A, 1218:7078–7093.

Otway, David

Peer Reviewed Journals • Donegan, K. P.; Godsell, J. F.; Tobin, J. M.; O’Byrne, J. P.; Otway, D. J.; Morris, M. A.; Roy, S.; Holmes, J. D.; (2011) ‘Microwave-assisted synthesis of icosahedral nickel nanocrystals’. CrystEngComm, 3:2023–2028. • Fleming, P. G.; Holmes, J. D.; Otway, D. J.; Morris, M. A.; (2011) ‘The complex synthesis and solid state chemistry of ceria-lanthana solid solutions prepared via a hexamethylenetetramine precipitation’. Journal of Solid State Chemistry, 184:2595–2600.

Pemble, Martyn

Peer Reviewed Journals • B. Ding, M.E. Pemble, A.V. Korovin, U. Peschel, S.G. Romanov; (2011) ‘Gold ﬁlm-terminated 3-dimensional photonic crystals’. Applied Physics A-Materials Science & Amp; Processing. • Mark G Nolan, Jeff A Hamilton, Shane O’Brien, Giuseppe Bruno, Luis Pereira, Elvira Fortunato, Rodrigo Martins, Ian M Povey, Martyn E Pemble; (2011) ‘The Characterisation of Aerosol Assisted CVD Conducting, Photocatalytic Indium Doped Zinc Oxide Films’. Journal of Photochemistry and Photobiology A, Chemistry. • S. Monaghan, A. O’Mahony, K. Cherkaoui, É. O’Connor, I. M. Povey, M. G. Nolan, D. O’Connell, M. E. Pemble, P. K. Hurley, G. Provenzano, F. Crupi, S. B. Newcomb; (2011) ‘Electrical analysis of three-stage passivated In0.53Ga0.47As capacitors with varying HfO2 thicknesses and incorporating an Al2O3 interface control layer’. Journal of Vacuum Science & Amp; Technology B, 29.

Pravda, Miloslav

Book Chapters Return to President’s Report • Miloslav Pravda; (2011) ‘Electrochemical Analysis’ In: John W. Fuquay, Patrick Fox, Paul McSweeney (Eds.). Encyclopedia of Dairy Sciences 2nd Edition. Amsterdam: Elsevier. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxv

Venables, Dean

Peer Reviewed Journals • Chen, J,Venables, DS; (2011) ‘Abroadband optical cavity spectrometer for measuring weak near-ultraviolet absorption spectra of gases’. Atmospheric Measurement Techniques, 4:425–436. • Chen, J., Wenger, J.C., and Venables, D.S.; (2011) ‘Near-Ultraviolet Absorption Cross Sections of Nitrophenols and Their Potential Inﬂuence on Tropospheric Oxidation Capacity’. Journal of Physical Chemistry A, 115:12235–12242.

Wenger, John

Peer Reviewed Journals • McGillen MR, Archibald AT, Carey T, Leather KE, Shallcross DE, Wenger JC, Percival CJ ; (2011) ‘Structure-activity relationship (SAR) for the prediction of gas-phase ozonolysis rate coefﬁcients: an extension towards heteroatomic unsaturated species’. Physical Chemistry Chemical Physics, 13 (7):2842–2849.

Microbiology

Achtman, Mark

Peer Reviewed Journals • Accou-Demartin, M,Gaborieau, V,Song, YJ,Roumagnac, P,Marchou, B,Achtman, M,Weill, FX; (2011) ‘Salmonella enterica Serotype Typhi with Nonclassical Quinolone Resistance Phenotype’. Emerging Infectious Diseases, 17:1091–1094. • Croxall, G,Hale, J,Weston, V,Manning, G,Cheetham, P,Achtman, M,McNally, A (2011) ‘Molecular epidemiology of extraintestinal pathogenic Escherichia coli isolates from a regional cohort of elderly patients highlights the prevalence of ST131 strains with increased antimicrobial resistance in both community and hospital care settings’. Journal of Antimicrobial Chemotherapy, 66:2501–2508. • Didelot, X,Bowden, R,Street, T,Golubchik, T,Spencer, C,McVean, G,Sangal, V,Anjum, MF,Achtman, M,Falush, D,Donnelly, P; (2011) ‘Recombination and Population Structure in Salmonella enterica’. Gene, 7. • Vogler, AJ,Chan, F,Wagner, DM,Roumagnac, P,Lee, J,Nera, R,Eppinger, M,Ravel, J,Rahalison, L,Rasoamanana, BW,Beckstrom-Sternberg, SM,Achtman, M,Chanteau, S,Keim, P (2011) ‘Phylogeography and Molecular Epidemiology of Yersinia pestis in Madagascar’. Plos Neglected Tropical Diseases, 5.

Barbosa, Teresa

Peer Reviewed Journals Return to President’s Report • O’ Halloran JA,Barbosa, T. M.,Morrissey, J. P.,Kennedy, J.,Gara, F. O.,Dobson, A. D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. J Appl Microbiol. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxvi

• O’ Halloran, J.A., Barbosa, T.M., Morrissey, J.P., Kennedy, J., O’Gara, F., and Dobson, A.D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. Journal of applied microbiology, 110 (6):1495–1508. • Phelan RW, O’ Halloran JA, Kennedy J, Morrissey JP, Dobson AD, O’Gara F, Barbosa TM. (2011) ‘Diversity and bioactive potential of endospore-forming bacteria cultured from the marine sponge Haliclona simulans’. Journal of applied microbiology. • Phelan, R. W.,Clarke, C.,Morrissey, J. P.,Dobson, A. D.,O’Gara, F.,Barbosa, T. M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Appl Environ Microbiol, 77 (11):327–9327.

Clarke, David

Peer Reviewed Journals • Clarke DJ, Chaudhuri RR, Martin HM, Campbell BJ, Rhodes JM, Constantinidou C, Pallen MJ, Loman NJ, Cunningham AF, Browning DF, Henderson IR (2011) ‘Complete genome sequence of the Crohn’s disease-associated adherent-invasive Escherichia coli strain HM605’. Journal of Bacteriology, 193 (17). • Joyce SA, Lango L, Clarke DJ (2011) ‘The Regulation of Secondary Metabolism and Mutualism in the Insect Pathogenic Bacterium Photorhabdus luminescens’. Advances In Applied Microbiology, 76:1–25.

Collins, John K.

Peer Reviewed Journals • Bourke, M. G.,Salwa, S.,Harrington, K. J.,Kucharczyk, M. J.,Forde, P. F.,de Kruijf, M.,Soden, D.,Tangney, M.,Collins, J. K.,O’Sullivan, G. C.; (2011) ‘The emerging role of viruses in the treatment of solid tumours’. Cancer Treat Rev.

Dow, Max

Book Chapters • J. M. Dow and V. Venturi; (2011) ‘Recent advances in understanding quorum-sensing and regulation of virulence in phytopathogenic bacteria’ In: N. Wang, G. Sundin, F. White, C. Roper and J. Jones (Eds.). Hot topics in Phytobacteriology. St Paul MN: APS Press.

Return to • J. M. Dow, Y. McCarthy, K. O’Donovan, D. Caly and R. P. Ryan ; (2011) ‘Cyclic di-GMP signalling and regulation in bacteria’ In: A Filloux (Eds.). President’s Report Regulatory Networks in Microbiology. Hethersett, Norfolk: Horizon Scientiﬁc Press. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxvii

Peer Reviewed Journals • A. J. Bogdanove, R. Koebnik, H. Lu, A. Furutani, S. Angiuoli, P. B. Patil, M.-A. Van Sluys, R. P. Ryan, D. F. Meyer, S.-W. Han, G. Aparna, M. Rajaram, A. L. Delcher, A. Phillippy, D. Puiu, M.Schatz, M. Shumway, D. D. Sommer, C. Trapnell, F. Benahmed, G.Dimitrov, R. Madupu, D. Radune, S.Sullivan, G. Jha, H. Ishihara, S.-W. Lee, A. Pandey, V. Sharma, M. Sriariyanun, B. Szurek, C. M. Vera-Cruz, K. S. Dorman, P. D. Ronald, V. Verdier, J. M. Dow, R. V. Sonti, S. Tsuge, V. Brendel, P. D. Rabinowicz, J. E. Leach, F. F. White, and S. L. Salzberg; (2011) ‘Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp’. Journal of bacteriology, 193:5450–5464. • J. Mansfield, S. Genin, S. Magori, V. Citovsky, M. Sriariyanum, P. Ronald, M.Dow, V.Verdier, S.V. Beer, M. A. Machado, I.Toth, G. Salmond and G. Foster ; (2011) ‘Top 10 Plant Bacteria in Molecular Plant Pathology’. Molecular plant pathology. • K. B. Twomey, O. J. O’Connell, Y.McCarthy, J. M. Dow, G.O’Toole, B. J. Plant and R. P. Ryan ; (2011) ‘Bacterial cis-2-unsaturated fatty acid signals found in the cystic fibrosis airway modulate virulence and persistence of Pseudomonas aeruginosa’. International Society for Microbial Ecology (ISME) Journal. • M. Fazli, A. O’Connell, M. Nilsson, K. Niehaus, J. M. Dow, M.Givskov, R. P. Ryan and T. Tolker-Nielsen ; (2011) ‘The CRP/FNR family protein Bcam1349 is a c-di-GMP effector that regulates biofilm formation and virulence in the respiratory pathogen Burkholderia cenocepacia’. Molecular microbiology, 82 (2):327–341. • N. Potnis, K. Krasileva, V.Chow, N. F. Almeida Jr, P. B. Patil, R. P. Ryan, M. Sharlach, F. Behlau, J. M. Dow, M. T. Momol, F. F.White, J. F. Preston, B.A. Vinatzer, R. Koebnik, J. C. Setubal, D. J. Norman, B. J. Staskawicz and J. B. Jones; (2011) ‘Comparative Genomics Reveals Diversity among Xanthomonads Infecting Tomato and Pepper’. BMC Genomics, 12. • R. P. Ryan and J. M. Dow; (2011) ‘Communication with a growing family: DSF signaling in bacteria’. Trends in Microbiology, 19:145–152.

• R. P. Ryan, F.-J. Vorhoelter, N. Potnis, J. B Jones, M.-A. Van Sluys, A. Bogdanove and J. M. Dow; (2011) ‘Pathogenomics of xanthomonads: developments in understanding bacterial-plant interactions’. Nature Reviews Microbiology.

• Smith, E.M, McCarthy, J., Nevin, R., Khan, M.R., Dow, J.M., O’Gara, F., and Doohan, F.M. (2011) ‘In vitro analyses are not reliable predictors of the plant growth promotion capability of bacteria; a Pseudomonas ﬂuorescens strain that promotes the growth and yield of wheat’. Journal of applied microbiology, 111 (3):683–692.

• Y. McCarthy, J. M. Dow and R. P. Ryan; (2011) ‘The Ax21 protein is a cell-cell signal regulating virulence in the nosocomial pathogen Stenotrophomonas maltophilia’. Journal of bacteriology, 193:6375–6378.

Fitzgerald, Gerald F.

Peer Reviewed Journals • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Arole for proline synthesis and transport in Listeria monocytogenes barotolerance’. Journal of Applied Microbiology, 110:1187–1194. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Novel listerial genetic loci conferring enhanced barotolerance in Escherichia coli’. Return to Journal of Applied Microbiology, 110:618–630. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxviii

• Cronin, M,Ventura, M,Fitzgerald, GF,van Sinderen, D; (2011) ‘Progress in genomics, metabolism and biotechnology of bifidobacteria’. International Journal of Food Microbiology, 149:4–18. • Doherty, SB,Gee, VL,Ross, RP,Stanton, C,Fitzgerald, GF,Brodkorb, A; (2011) ‘Development and characterisation of whey protein micro-beads as potential matrices for probiotic protection’. Food Hydrocolloids, 25:1604–1617. • Fallico, V,McAuliffe, O,Fitzgerald, GF,Ross, RP; (2011) ‘Plasmids of Raw Milk Cheese Isolate Lactococcus lactis subsp lactis Biovar diacetylactis DPC3901 Suggest a Plant-Based Origin for the Strain’. Applied and Environmental Microbiology, 77:6451–6462. • Kearney, N,Stack, HM,Tobin, JT,Chaurin, V,Fenelon, MA,Fitzgerald, GF,Ross, RP,Stanton, C; (2011) ‘Lactobacillus paracasei NFBC 338 producing recombinant beta-glucan positively influences the functional properties of yoghurt’. Rna-A Publication of The Rna Society, 21:561–567. • Mills, S. and Ross, R. P. and Hill, C. and Fitzgerald, G. F. and Stanton, C.; (2011) ‘Milk intelligence: Mining milk for bioactive substances associated with human health’. International Dairy Journal, 21 (6):377–401. • Norberg, S,O’Connor, PM,Stanton, C,Ross, RP,Hill, C,Fitzgerald, GF,Cotter, PD; (2011) ‘Altering the Composition of Caseicins A and B as a Means of Determining the Contribution of Specific Residues to Antimicrobial Activity’. Applied and Environmental Microbiology, 77:2496–2501. • Pokusaeva, K,O’Connell-Motherway, M,Zomer, A,MacSharry, J,Fitzgerald, GF,van Sinderen, D; (2011) ‘Cellodextrin Utilization by Bifidobacterium breve UCC2003’. Applied and Environmental Microbiology, 77:1681–1690. • Rosberg-Cody, E,Liavonchanka, A,Gobel, C,Ross, RP,O’Sullivan, O,Fitzgerald, GF,Feussner, I,Stanton, C; (2011) ‘Myosin-cross-reactive antigen (MCRA) protein from Bifidobacterium breve is a FAD-dependent fatty acid hydratase which has a function in stress protection’. Chemistry (Weinheim An Der Bergstrasse, Germany), 12. • Rosberg-Cody, E,Stanton, C,O’Mahony, L,Wall, R,Shanahan, F,Quigley, EM,Fitzgerald, GF,Ross, RP; (2011) ‘Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice’. Microbiology-SGM, 157:609–615. • Russell, DA,Ross, RP,Fitzgerald, GF,Stanton, C; (2011) ‘Metabolic activities and probiotic potential of bifidobacteria’. International Journal of Food Microbiology, 149:88–105.

Gahan, Cormac

Peer Reviewed Journals • Bahey-el-din M and Gahan CG (2011) ‘Lactococcus lactis based vaccines: current status and future perspectives’. Human Vaccines, 7 (1):106–109. • Casey PG, Hill C, Gahan CG (2011) ‘E. coli O104:H4 social media and the characterization of an emerging pathogen’. Bioengineered Bugs, 2 (3):189–193. • Davey, MS,Lin, CY,Roberts, GW,Heuston, S,Brown, AC,Chess, JA,Toleman, MA,Gahan, CGM,Hill, C,Parish, T,Williams, JD,Davies, SJ,Johnson, DW,Topley, N,Moser, B,Eberl, M; (2011) ‘Human Neutrophil Clearance of Bacterial Pathogens Triggers Anti-Microbial gamma delta T Cell Responses in Early Infection’. Plos Pathogens, 7. Return to President’s Report • Dowd GC, Casey PG, Begley M, Hill C, Gahan CG (2011) ‘Investigation of the role of ZurR in the physiology and pathogenesis of Listeria monocytogenes’. Fems Microbiology Letters. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxix

• Dowd, GC,Joyce, SA,Hill, C,Gahan, CGM; (2011) ‘Investigation of the Mechanisms by Which Listeria monocytogenes Grows in Porcine Gallbladder Bile’. Infection and Immunity, 79:369–379. • McLaughlin HP, Casey PG, Cotter J, Gahan CG and Hill C (2011) ‘Factors affecting survival of Listeria monocytogenes and Listeria innocua in soil samples’. Archives of microbiology, 193 (11):775–785. • McLaughlin HP, Hill C, Gahan CG; (2011) ‘The impact of iron on Listeria monocytogenes; inside and outside the host’. Current opinion in biotechnology, 22 (2):194–199.

Hill, Colin

Peer Reviewed Journals • Casey PG, Hill C, Gahan CG (2011) ‘E. coli O104:H4 social media and the characterization of an emerging pathogen’. Bioengineered Bugs, 2 (3):189–193. • Claesson, Marcus J. and Cusack, Siobhan and O’Sullivan, Orla and Greene-Diniz, Rachel and de Weerd, Heleen and Flannery, Edel and Marchesi, Julian R. and Falush, Daniel and Dinan, Timothy and Fitzgerald, Gerald and Stanton, Catherine and van Sinderen, Douwe and O’Connor, Michael and Harnedy, Norma and O’Connor, Kieran and Henry, Colm and O’Mahony, Denis and Fitzgerald, Anthony P. and Shanahan, Fergus and Twomey, Cillian and Hill, Colin and Ross, R. Paul and O’Toole, Paul W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings Of The National Academy Of Sciences Of The United States Of America, 108 (Suppl. 1):4586–4591. • Clayton, EM,Hill, C,Cotter, PD,Ross, RP; (2011) ‘Real-Time PCR Assay To Differentiate Listeriolysin S-Positive and -Negative Strains of Listeria monocytogenes’. Applied and Environmental Microbiology, 77:163–171. • Collins, B,Cotter, PD,Hill, C,Ross, RP; (2011) ‘The impact of nisin on sensitive and resistant mutants of Listeria monocytogenes in cottage cheese’. Journal of Applied Microbiology, 110:1509–1514. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Arole for proline synthesis and transport in Listeria monocytogenes barotolerance’. Journal of Applied Microbiology, 110:1187–1194. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Novel listerial genetic loci conferring enhanced barotolerance in Escherichia coli’. Journal of Applied Microbiology, 110:618–630. • Davey, MS,Lin, CY,Roberts, GW,Heuston, S,Brown, AC,Chess, JA,Toleman, MA,Gahan, CGM,Hill, C,Parish, T,Williams, JD,Davies, SJ,Johnson, DW,Topley, N,Moser, B,Eberl, M; (2011) ‘Human Neutrophil Clearance of Bacterial Pathogens Triggers Anti-Microbial gamma delta T Cell Responses in Early Infection’. Plos Pathogens, 7. • Dobson, A,Crispie, F,Rea, MC,O’Sullivan, O,Casey, PG,Lawlor, PG,Cotter, PD,Ross, P,Gardiner, GE,Hill, C; (2011) ‘Fate and efficacy of lacticin 3147-producing Lactococcus lactis in the mammalian gastrointestinal tract’. Fems Microbiology Ecology, 76:602–614. • Dobson, A,O’Sullivan, O,Cotter, PD,Ross, P,Hill, C; (2011) ‘High-throughput sequence-based analysis of the bacterial composition of kefir and an associated kefir grain’. Fems Microbiology Letters, 320:56–62. Return to President’s Report • Dowd GC, Casey PG, Begley M, Hill C, Gahan CG (2011) ‘Investigation of the role of ZurR in the physiology and pathogenesis of Listeria monocytogenes’. Fems Microbiology Letters. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxx

• Dowd, GC,Joyce, SA,Hill, C,Gahan, CGM; (2011) ‘Investigation of the Mechanisms by Which Listeria monocytogenes Grows in Porcine Gallbladder Bile’. Infection and Immunity, 79:369–379. • Guinane, Caitriona M. and Kent, Robert M. and Norberg, Sarah and Hill, Colin and Fitzgerald, Gerald F. and Stanton, Catherine and Ross, R. Paul; (2011) ‘Host Speciﬁc Diversity in Lactobacillus johnsonii as Evidenced by a Major Chromosomal Inversion and Phage Resistance Mechanisms’. PLOS ONE, 6 (4). • Hein, I,Klinger, S,Dooms, M,Flekna, G,Stessl, B,Leclercq, A,Hill, C,Allerberger, F,Wagner, M; (2011) ‘Stress Survival Islet 1 (SSI-1) Survey in Listeria monocytogenes Reveals an Insert Common to Listeria innocua in Sequence Type 121 L. monocytogenes Strains’. Applied and Environmental Microbiology, 77:2169–2173. • Hill, Colin; (2011) ‘Microbes and food, partners in sickness and in health’. Microbial Biotechnology, 4 (2, Sp. Iss. SI):117–118. • McLaughlin HP, Casey PG, Cotter J, Gahan CG and Hill C (2011) ‘Factors affecting survival of Listeria monocytogenes and Listeria innocua in soil samples’. Archives of microbiology, 193 (11):775–785.

• McLaughlin HP, Hill C, Gahan CG; (2011) ‘The impact of iron on Listeria monocytogenes; inside and outside the host’. Current opinion in biotechnology, 22 (2):194–199.

• McLaughlin, Heather P. and Hill, Colin and Gahan, Cormac G. M.; (2011) ‘The impact of iron on Listeria monocytogenes; inside and outside the host’. Current Opinion In Biotechnology, 22 (2):194–199. • Mills, S. and Ross, R. P. and Hill, C. and Fitzgerald, G. F. and Stanton, C.; (2011) ‘Milk intelligence: Mining milk for bioactive substances associated with human health’. International Dairy Journal, 21 (6):377–401. • Molloy, Evelyn M. and Cotter, Paul D. and Hill, Colin and Mitchell, Douglas A. and Ross, R. Paul; (2011) ‘Streptolysin S-like virulence factors: the continuing sagA’.Nature Reviews Microbiology, 9 (9):670–681. • Morrissey, R,Begley, M,Oshima, S,Rea, M,Ross, RP,Hill, C; (2011) ‘Real-Time Monitoring of Luciferase-Tagged Cronobacter sakazakii in Reconstituted Infant Milk Formula’. Journal of Food Protection, 74:573–579.

• Murphy, K,O’Sullivan, O,Rea, MC,Cotter, PD,Ross, RP,Hill, C; (2011) ‘Genome Mining for Radical SAM Protein Determinants Reveals Multiple Sactibiotic-Like Gene Clusters’. Plos One, 6.

Return to • Rea, MC,Dobson, A,O’Sullivan, O,Crispie, F,Fouhy, F,Cotter, PD,Shanahan, F,Kiely, B,Hill, C,Ross, RP; (2011) ‘Effect of broad- and narrow-spectrum President’s Report antimicrobials on Clostridium difﬁcile and microbial diversity in a model of the distal colon’. Proceedings of the National Academy of Sciences of the United States of America, 108:4639–4644. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxi

Other • Cotter, PD,Ross, RP,Hill, C (2011) Flagging ﬂora: help from bacteriocins?. Other.

Morrissey, John

Peer Reviewed Journals • Barret, M., Egan, F., Fargier, E., Morrissey, J.P., and O’Gara, F.; (2011) ‘Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered’. Microbiology Journal, 157 (Pt 6):1726–1739. • Barret, M., Egan, F., Fargier, E., Morrissey, J.P., and O’Gara, F.; (2011) ‘Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered’. Microbiology, 157 (Pt 6Pt 6):1726–391726. • Barret, M., Morrissey, J.P., and O’Gara, F.; (2011) ‘Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence’. Biology and Fertility of Soils, 47 (7):729–743. • Holcombe, L.J., O’Gara, F., and Morrissey, J.P. (2011) ‘Implications of interspecies signaling for virulence of bacteria and fungal pathogens’. Future Microbiology, 6 (7):799–817. • Kennedy, J., O’Leary, N., Kiran, S., Morrissey, J., O’Gara, F., Selvin, J. and Dobson, A.D.W. (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications’. Journal of applied microbiology, 111:787–799. • Kennedy, J., O’Leary, N.D., Kiran, G.S., Morrissey, J.P., O’Gara, F., Selvin, J., and Dobson, A.D.W.; (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems’. Journal of applied microbiology, 111 (4):787–799. • Lane, M. M.,Burke, N.,Karreman, R.,Wolfe, K. H.,O’Byrne, C. P.,Morrissey, J. P.; (2011) ‘Physiological and metabolic diversity in the yeast Kluyveromyces marxianus’. Antonie Van Leeuwenhoek. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Ahigh-throughput screen to identify novel calcineurin inhibitors’. Journal of Microbiological Methods. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Diversity and anti-microbial activity of bacteria from the coastal marine sponges Amphilectus fucorum and Eurypon major’. Letters In Applied Microbiology. • O’ Halloran JA,Barbosa, T. M.,Morrissey, J. P.,Kennedy, J.,Gara, F. O.,Dobson, A. D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. J Appl Microbiol. • O’ Halloran, J.A., Barbosa, T.M., Morrissey, J.P., Kennedy, J., O’Gara, F., and Dobson, A.D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. Journal of applied microbiology, 110 (6):1495–1508. • Phelan, R. W.,Clarke, C.,Morrissey, J. P.,Dobson, A. D.,O’Gara, F.,Barbosa, T. M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Appl Environ Microbiol, 77 (11):327–9327. Return to President’s Report • Phelan, R.W., Clarke, C., Barbosa, T., Morrissey, J.P., Dobson, A.D.W. and O’Gara, F. ; (2011) ‘Atetracycline resistance encoding plasmid from a Bacillus sp. strain isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77:327–329. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxii

• Phelan, R.W., Clarke, C., Morrissey, J.P., Dobson, A.D., O’Gara, F., and Barbosa, T.M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77 (1):327–329. • Reen, F.J., Mooij, M.J., Holcombe, L.J., McSweeney, C.M., McGlacken, G.P., Morrissey, J.P., and O’Gara, F.; (2011) ‘The Pseudomonas quinolone signal (PQS), and its precursor HHQ, modulate interspecies and interkingdom behaviour’. FEMS Microbiol Ecol, 77 (2):413–428. • Rice, O., Miller, S.H., Morrissey, J.P, and O’Gara, F.; (2011) ‘Exploitation of glucose catabolic gene fusions to investigate in situ expression during Pseudomonas-plant interactions’. Biology and Fertility of Soils.

O’Gara, Fergal

Peer Reviewed Journals • Barret, M., Egan, F., Fargier, E., Morrissey, J.P., and O’Gara, F.; (2011) ‘Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered’. Microbiology Journal, 157 (Pt 6):1726–1739. • Barret, M., Morrissey, J.P., and O’Gara, F.; (2011) ‘Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence’. Biology and Fertility of Soils, 47 (7):729–743. • Flemer B, Kennedy J, Margassery LM, Morrissey JP, O’Gara F, Dobson AD. (2011) ‘Diversity and antimicrobial activities of microbes from two Irish marine sponges, Suberites carnosus and Leucosolenia sp’. Journal of applied microbiology. • Holcombe, L.J., O’Gara, F., and Morrissey, J.P. (2011) ‘Implications of interspecies signaling for virulence of bacteria and fungal pathogens’. Future Microbiology, 6 (7):799–817. • Kennedy, J., O’Leary, N.D., Kiran, G.S., Morrissey, J.P., O’Gara, F., Selvin, J., and Dobson, A.D.W.; (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems’. Journal of applied microbiology, 111 (4):787–799. • Legendre, C., Mooij, M.J., Adams, C., and O’Gara, F.; (2011) ‘Impaired expression of hypoxia-inducible factor-1α in cystic ﬁbrosis airway epithelial cells — A role for HIF-1 in the pathophysiology of CF?’. Journal of Cystic Fibrosis, 10 (4):286–290. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Ahigh-throughput screen to identify novel calcineurin inhibitors’. Journal of Microbiological Methods. • O’ Halloran, J.A., Barbosa, T.M., Morrissey, J.P., Kennedy, J., O’Gara, F., and Dobson, A.D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. Journal of applied microbiology, 110 (6):1495–1508. • O’Callaghan, J., Reen, F.J., Adams, C., and O’Gara, F. (2011) ‘Low oxygen induces the T3SS in Pseudomonas aeruginosa via modulation of the small RNAs, rsmZ and rsmY’.Microbiology. • Phelan RW, O’ Halloran JA, Kennedy J, Morrissey JP, Dobson AD, O’Gara F, Barbosa TM. (2011) ‘Diversity and bioactive potential of endospore-forming bacteria cultured from the marine sponge Haliclona simulans’. Journal of applied microbiology. Return to President’s Report • Phelan, R.W., Clarke, C., Morrissey, J.P., Dobson, A.D., O’Gara, F., and Barbosa, T.M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77 (1):327–329. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxiii

• Reen, F.J., Mooij, M.J., Holcombe, L.J., McSweeney, C.M., McGlacken, G.P., Morrissey, J.P., and O’Gara, F.; (2011) ‘The Pseudomonas quinolone signal (PQS), and its precursor HHQ, modulate interspecies and interkingdom behaviour’. FEMS Microbiol Ecol, 77 (2):413–428. • Rice, O., Miller, S.H., Morrissey, J.P, and O’Gara, F.; (2011) ‘Exploitation of glucose catabolic gene fusions to investigate in situ expression during Pseudomonas-plant interactions’. Biology and Fertility of Soils. • Smith, E.M, McCarthy, J., Nevin, R., Khan, M.R., Dow, J.M., O’Gara, F., and Doohan, F.M. (2011) ‘In vitro analyses are not reliable predictors of the plant growth promotion capability of bacteria; a Pseudomonas ﬂuorescens strain that promotes the growth and yield of wheat’. Journal of applied microbiology, 111 (3):683–692. • Zhou, L., Glennon, J.D., Luong, J.H.T., Reen, F.J., O’Gara, F., McSweeney, C., and McGlacken, G.P.; (2011) ‘Detection of the Pseudomonas Quinolone Signal (PQS) by cyclic voltammetry and amperometry using a boron doped diamond electrode’. Chemical Communications, 47 (37):10347–10349.

O’Toole, Paul

Peer Reviewed Journals • Claesson, M. J.,Cusack, S.,O’Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, A.P.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O’Connor, M.,Harnedy, N.,O’Connor, K.,Henry, C.,O’Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O’Toole, P. W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings of The National Acadamy of Sciences, 108 Suppl 1:4586–914586. • O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional genome analysis of Biﬁdobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222.

• Raftis, EJ,Salvetti, E,Torriani, S,Felis, GE,O’Toole, PW; (2011) ‘Genomic Diversity of Lactobacillus salivarius’. Applied and Environmental Microbiology, 77:954–965.

Prentice, Michael

Book Chapters • Prentice, MB; (2011) ‘Yersiniosis and Plague’ In: S.R. Palmer, Lord Soulsby , Paul Torgerson , David W. G. Brown (Eds.). Oxford Textbook of Zoonoses: Biology, Clinical Practice, and Public Health Control. Oxford: Oxford University Press. • Prentice, Michael B.; (2011) ‘Plague and other Yersinia infections’ In: Dan L. Longo, Dennis L. Kasper, J. Larry Jameson, Anthony S. Fauci, Stephen L. Hauser, Joseph Loscalzo, Eds (Eds.). Harrison’s Principles and Practice of Internal Medicine. New York: McGraw-Hill.

Peer Reviewed Journals

Return to • Prior AR, Bredin CP, Seigne P, Corcoran D, Prentice M; (2011) ‘Anunusual case of Legionellosis’. Irish Medical Journal, 104 (3):89–90. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxiv

Scallan, Martina

Peer Reviewed Journals • Landin, AM,Frasca, D,Harrison, P,Scallan, M,Riley, RL,Blomberg, BB; (2011) ‘E47 retroviral rescue of intrinsic B-cell defects in senescent mice’. Aging Cell, 10:327–337. • Landin, Ana Marie,Frasca, Daniela,Harrison, Patrick,Scallan, Martina,Riley, Richard L.,Blomberg, Bonnie B.; (2011) ‘E47 retroviral rescue of intrinsic B cell defects in senescent mice’. Aging Cell.

Van Sinderen, Douwe

Peer Reviewed Journals • Capozzi, V,Menga, V,Digesu, AM,De Vita, P,van Sinderen, D,Cattivelli, L,Fares, C,Spano, G; (2011) ‘Biotechnological Production of Vitamin B2-Enriched Bread and Pasta’. Rna-A Publication of The Rna Society, 59:8013–8020. • Claesson, Marcus J. and Cusack, Siobhan and O’Sullivan, Orla and Greene-Diniz, Rachel and de Weerd, Heleen and Flannery, Edel and Marchesi, Julian R. and Falush, Daniel and Dinan, Timothy and Fitzgerald, Gerald and Stanton, Catherine and van Sinderen, Douwe and O’Connor, Michael and Harnedy, Norma and O’Connor, Kieran and Henry, Colm and O’Mahony, Denis and Fitzgerald, Anthony P. and Shanahan, Fergus and Twomey, Cillian and Hill, Colin and Ross, R. Paul and O’Toole, Paul W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings Of The National Academy Of Sciences Of The United States Of America, 108 (Suppl. 1):4586–4591.

• Cronin, M,Ventura, M,Fitzgerald, GF,van Sinderen, D; (2011) ‘Progress in genomics, metabolism and biotechnology of bifidobacteria’. International Journal of Food Microbiology, 149:4–18. • Douillard, FP,O’Connell-Motherway, M,Cambillau, C,van Sinderen, D; (2011) ‘Expanding the molecular toolbox for Lactococcus lactis: construction of an inducible thioredoxin gene fusion expression system’. Microbial Cell Factories, 10. • Guinane, CM,Barrett, E,Fitzgerald, GF,van Sinderen, D,Ross, RP,Stanton, C (2011) ‘Genome Sequence of Bifidobacterium breve DPC 6330, a Strain Isolated from the Human Intestine’. Journal of Bacteriology, 193:6799–6800. • O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222. • Pokusaeva, K,O’Connell-Motherway, M,Zomer, A,MacSharry, J,Fitzgerald, GF,van Sinderen, D; (2011) ‘Cellodextrin Utilization by Bifidobacterium breve UCC2003’. Applied and Environmental Microbiology, 77:1681–1690.

Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxv

Physics

Busch, Thomas

Peer Reviewed Journals • C. Di Franco, M. Mc Gettrick, Th. Busch; (2011) ‘Mimicking the probability distribution of a two-dimensional Grover walk with a single-qubit coin’. Physical Review Letters, 106. • J. Goold, M. Krych, Z. Idziaszek, T. Fogarty, and Th. Busch; (2011) ‘Aneccentrically perturbed Tonks-Girardeau gas’. New Journal of Physics, 12.

• J. Li, T. Fogarty, C. Cormick, J. Goold, T. Busch, and M. Paternostro; (2011) ‘Tripartite nonlocality and continuous-variable entanglement in thermal states of trapped ions’. Physical Review A, 84. • L. Rutherford, J. Goold, Th. Busch, J.F. McCann; (2011) ‘Transport, atom blockade and output coupling in a Tonks-Girardeau gas’. Physical Review A, 83. • N. Lo Gullo, Th. Busch, M. Paternostro ; (2011) ‘Structural change of vortex patterns in anisotropic Bose-Einstein condensates’. Physical Review A, 83. • T. Fogarty, J. Goold, M. Paternostro, Th. Busch; (2011) ‘Non-locality of Two Ultracold Trapped Atoms’. New Journal of Physics, 13.

• T. Morgan, B. O’Sullivan, Th. Busch ; (2011) ‘Coherent adiabatic transport of atoms in radio-frequency traps’. Physical Review A, 83.

Mac Cárthaigh, Pádraig

Conference Publications • P.J. Mc Carthy, S. O’Mahony and the ASDEX Upgrade Team (2011) Eigenface representation of equilibrium ﬂux using Function Parameterization. In: A. Becoulet, T. Hoang, U. Stroth eds. 38th EPS Conference on Controlled Fusion and Plasma Physics Strasbourg, 2011–06–27- 2011–01–07.

Nic Chormaic, Síle

Peer Reviewed Journals • A. Petcu-Colan, M. Frawley and S. Nic Chormaic; (2011) ‘Tapered few-mode ﬁbers: mode evolution during fabrication and adiabaticity’. Journal of Nonlinear Optical Physics & Amp; Materials. • A. Watkins, J. Ward, Y. Wu and S. Nic Chormaic; (2011) ‘Single input spherical microbubble resonator’. Optics Letters, 36.

• M. Frawley, V. Minogin and S. Nic Chormaic; (2011) ‘The Van der Waals interaction of an atom with the convex surface of a nanocylinder’. Physica Scripta. Return to • R. Schmidt, S. Nic Chormaic and V. G. Minogin; (2011) ‘Van der Waals interaction of a neutral atom with the surface of a metal or dielectric President’s Report nanosphere’. Journal of Physics B-Atomic Molecular and Optical Physics, 44. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxvi

Peters, Frank

Peer Reviewed Journals • Jeong Hwan Song, Marc Rensing, Chris L. L. M. Daunt, Peter O’Brien, and Frank H. Peters; (2011) ‘Directly Modulated Laser Diode Module Exceeding 10 Gb/s Transmission’. Ieee Transactions On Components and Packaging Technologies, 1 (6). • K.-H. Lee, B. Roycroft, J. O’Callaghan, C. L. L. M. Daunt, H. Yang, J. H. Song, F. H. Peters, and B. Corbett; (2011) ‘Integration of AlInGaAs-MQW Fabry-Pérot Lasers With Emission at Two Wavelength Ranges via Quantum-Well Intermixing’. IEEE Photonics Technology Letters, 23 (1). • S. O’Brien, F. Smyth, K. Shi, J. O’Carroll, P. Anandarajah, D. Bitauld, S. Osborne, R. Phelan, B. Kelly, J. O’Gorman, F. Peters, B. Roycroft, B. Corbett, and L.P. Barry; (2011) ‘Design, Characterisation and Application of Index-Patterned Fabry-Perot Lasers’. Ieee Journal of Selected Topics In Quantum Electronics.

Conference Publications • A. Wieczorek, B. Roycroft, F.H. Peters, B. Corbett; (2011) TE/TM-mode pass polarizers and splitter based on an asymmetric twin waveguide and resonant coupling. NUSOD Rome, Italy. • A. Wieczorek, B.Roycroft, F.H. Peters, B. Corbett; (2011) Analysis of mode coupling in an asymmetric twin waveguide. Photonics Ireland Malahide, Ireland. • B. Roycroft, J. O’Callaghan, A. Gocalinska, E. Pelucchi, K. Thomas, C. Daunt, F. Peters, B. Corbett; (2011) Waveguide couplers in photonic integrated circuits. Photonics Ireland Malahide, Ireland. • C. L. L. M. Daunt, W. Han, H. Yang, J. O’Callaghan, B. Corbett and F. H. Peters; (2011) RF Analysis, and Optimization, of Electroabsorption Modulator based Photonic Integrated Circuits. IPC11 Arlington, Virginia.

• Chris Daunt, H. Yang, K. Lee, J. O’Callaghan, B. Corbett, and F.H. Peters ; (2011) Ultra compact electro absorption modulators for photonic integrated circuits. Photonics Ireland Malahide, Ireland.

• Chris L. Daunt, Ciaran S. Cleary, Robert J. Manning and Frank H. Peters; (2011) Sub 10 ps Carrier Response Times in Electroabsorption Modulators Using Quantum Well Offsetting. Frontiers in Optics San Jose, California. • F. Smyth, K. Shi, P.M. Anandarajah, B. Roycroft, B. Corbett, F. H. Peters and L. P. Barry; (2011) Tunable Slotted Fabry-Pérot Lasers for Agile Optical Networks. OFC. • Hua Yang, Chris LL M Daunt, Ko-Hsin Lee, Wei Han, Farzan Gity, Brian Corbett and Frank H Peters; (2011) High-speed and high-power InGaAs/InP photodiode. IPRM. • J. A. O’Dowd, V. M. Bessler , S. K. Ibrahim A. J. Walsh, F. H. Peters, B. Corbett, B. Roycroft, P. O’Brien and A. D. Ellis; (2011) Implementation of a High Speed Time Resolved Error Detector Utilising a High Speed FPGA ICTON 2011 Stockholm, Sweden.

Return to • James O’Callaghan, Brendan Roycroft, Wei-Hua Guo, Chris LL M Daunt, John F Donegan, Frank H Peters and Brian Corbett; (2011) Refractive President’s Report index contributions to phase shifting in InP based 30 GHz bandwidth n-i-n Mach-Zehnder Modulators. IPRM. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxvii

• K.H. Lee, R.P. Webb, R.J. Manning, X. Wang, M. Mulcahy, M. Rensing, P. O’Brien, B. Roycroft, J. O’Callaghan, F.H. Peters, B. Corbett; (2011) Packaged two-bandgap semiconductor optical ampliﬁer monolithically integrated using quantum well intermixing in AlInGaAs-based MQW structure. Photonics Ireland Malahide, Ireland.

• Ko-Hsin Lee, Rod P. Webb, Robert J. Manning, Brendan Roycroft, James O’Callaghan, Frank H. Peters and Brian Corbett; (2011) Two-bandgap semiconductor optical ampliﬁer integrated using quantum well intermixing. IPRM. • P.E. Morrissey, R. Sheehan, D. Goulding, F.H. Peters; (2011) Optimum Design of Multimode Interference Couplers (MMI) with Fabrication Tolerances. Photonics Ireland Malahide, Ireland. • Padraic Morrissey, Dave Goulding, Frank H. Peters; (2011) Optimum Design of Multimode Interference Couplers With Fabrication Tolerances. SIOE ‘11 Cardiff, Wales. • R.N. Sheehan, K. Thomas, J. O’Callaghan, B. Roycroft, B. Corbett, F.H. Peters; (2011) Transmission-loss measurements on optical waveguide bends designed by different methods. Photonics Ireland Malahide, Ireland.

• W. Cotter, D. Goulding, B. Roycroft, B. Corbett and F. Peters; (2011) Integrated Optical Comb Generation for Coherent Communications Using Injection Locked Semiconductor Lasers. CLEO/Europe-EQEC.

• W. Han, M Rensing, C. Daunt, H. Yang, X. Wang, P. O’Brien, F. H. Peters; (2011) A universal broadband packaging scheme for high-speed optoelectronic devices. Photonics Ireland Malahide, Ireland. • Wei Han, Christ Daunt, Hua Yang, Marc Rensing, Xin Wang, Peter O’Brien and Frank Peters; (2011) Development of a Broadband Matching Network for Electro- Absorption Modulators. NUSOD Rome, Italy. • William Cotter, Dave Goulding, Brendan Roycroft,Brian Corbett, Frank Peters; (2011) Implementation of integrated optical comb generation using injection locked semiconductor lasers. Photonics Ireland Malahide, Ireland. • X.Wang, K.H.Lee, B.Snyder, W.Han, H.Yang, M.Mulcahy, F.H.Peters and P. O’Brien; (2011) Simpliﬁed laser welding sequence with secondary initial shift correction. Photonics Ireland Malahide, Ireland.

Ruth, Albert

• Nitschke, U; Ruth, AA; Dixneuf, S; Stengel, DB; (2011) ‘Molecular iodine emission rates and photosynthetic performance of different thallus parts of Laminaria digitata (Phaeophyceae) during emersion’. Planta, 233:737–748.

Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxviii

School of Biological, Earth, and Environmental Sciences

Burnell, Gavin

Peer Reviewed Journals • O’Mahoney, M., Mouzakitis, G., Doyle, J., and Burnell, G. (2011) ‘Anovel konjac glucomannan-xanthan gum binder for aquaculture feeds: the effect of binder conﬁguration on formulated feed stability, feed palatability and growth performance of the Japanese abalone, Haliotis discus hannai’. Aquaculture Nutrition, 17:395–407.

Butler, Fidelma

Edited Books • Butler, F and Kelleher, C (Ed.). (2011) Proceedings of the 1st All Ireland Mammal Symposium, Ireland: Ir Nat J. Special Supplement.

Conference Publications • Haigh,A. Butler, F and O’Riordan (2011) Habitat use by the European hedgehog (Erinaceus europaeus) in an Irish rural landscape. Proceedings of the 1st All Ireland Mammal Symposium, Butler, F and Kelleher, C. eds.

Chapman, Deborah

Peer Reviewed Journals • Bacci, Fabio and Chapman, Deborah V. (2011) ‘Microbiological assessment of private drinking water supplies in Co Cork, Ireland’. Jnl. Water and Health, 09.4:738–751. • Grace M. Cott, Marcel A. K. Jansen and Deborah V. Chapman. ; (2011) ‘Salt Marshes on Peat Substrate: Where Blanket Bogs Encounter the Marine Environment’. Journal of Coastal Research.

Other Journals • Cott, G., Reidy, D., Chapman D.V. and Jansen, M.A.K; (2011) ‘Saltmarshes on peat substrate on the southwest coast of Ireland: edaphic parameters and plant species distribution’ Geo-Eco-Marina. • Lettice, S., Jansen, M.A.K. and Chapman, D.V. ; (2011) ‘Differential decomposition patterns of marine and terrestrial biomass in a coastal lagoon’ Geo-Eco-Marina.

Cross, Thomas

Peer Reviewed Journals Return to President’s Report • Carlsson, J,Shephard, S,Coughlan, J,Trueman, CN,Rogan, E,Cross, TF; (2011) ‘Fine-scale population structure in a deep-sea teleost (orange roughy, Hoplostethus atlanticus)’. Deep-Sea Research Part I-Oceanographic Research Papers, 58:627–636. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxix

• L. Mirimin, R. Miller, E. Dillane, S. D. Berrow, S. Ingram, T. F. Cross & E. Rogan; (2011) ‘Fine-scale population genetic structuring of bottlenose’. Animal Conservation. • Lyons, L.J., O’Riordan, R.M., Cross, T.F. and Culloty, S.C.; (2011) ‘Reproductive biology of the shore crab Carcinus maenas (decapoda: Portunidae): a macroscopic and histological view’. Invertebrate Reproduction and Development.

Culloty, Sarah

• Lyons, L.J., O’Riordan, R.M., Cross, T.F. and Culloty, S.C.; (2011) ‘Reproductive biology of the shore crab Carcinus maenas (decapoda: Portunidae): a macroscopic and histological view’. Invertebrate Reproduction and Development.

• Maloy, AP; Culloty, SC; Bolton-Warberg, M; Fitzgerald, R; Slater, JW; (2011) ‘Molecular identification of laser dissected gut contents from hatchery realred larval cod, Gadus morhua: a new approach to diet analysis’. Aquaculture Nutrition, 17:536–541. • McCarthy, M; Culloty, SC; (2011) ‘Optomisation of two immunofluorescent antibodies for the detection of Escherichia coli using immunofluorescent microscopy and flow cytometry’. Current Microbiology, 62 (2):402–408. • Morgan, E., Kelly, T., O’Riordan, R.M. and Culloty, S.C. (2011) ‘The influence of disseminated neoplasia, trematode infections and gametogenesis on surfacing and mortality in the cockle, Cerastoderma edule’. Diseases of Aquatic Organisms. • Prinz, K; Kelly, TC; O’Riordan, RM; Culloty, SC; (2011) ‘Factors influencing cercarial emergence and settlement in the digenean trematode Parorchis acanthus (Philophthalmidae)’. Journal of The Marine Biological Association of The United Kingdom, 91 (8):1673–1679.

Conference Publications • Maloy AP, Culloty SC, Slater JW, Harrod C ; (2011) DNA-based dietary analysis of adult bivalves and it concurrence with stable isotopes 13C and 15N Annual meeting of the National Shellﬁsheries Association. • Maloy AP, Culloty SC, Slater JW; (2011) DNA-based dietary analysis of wild bivalve larvae. Annual meeting of the National Shellﬁsheries Association.

Doyle Prestwich, Barbara

Peer Reviewed Journals Return to President’s Report • Doyle Prestwich, B and O Herlihy E. (2011) ‘APreliminary Investigation into How Plant-Growth Promoting Rhizobacteria (PGPRs) Can Inﬂuence the Frequency of Gene Transfer in Agrobacterium and Transbacter-Mediated Transformation Systems’. Acta Horticultura. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxx

• Ghyselinck, J., O Herlihy, E., Heylen, K., Velivelli, S., De Vos, P. and Doyle Prestwich, B.; (2011) ‘Screening for broad spectrum biocontrol and direct plant growth promotion properties in rhizobacteria from potato ﬁelds in the Central Andean Highlands using a systematic approach’. FEMS Microbiol Ecol. • O Herlihy, E., Doyle Prestwich, B. and Wall G. ; (2011) ‘Anin vitro study to examine the potential of mutation breeding to create resistance to bacterial wilt (Ralstonia solanacearum) in tomato’. Acta Horticultura. • Velivelli, S., O Herlihy, E.O., Janczura, B., Doyle Prestwich, B., Ghyselinck, J and De Vos, P. ; (2011) ‘Efﬁcacy of Rhizobacteria on Plant Growth Promotion and Disease Suppression In Vitro’. Acta Horticultura.

Conference Publications • Barbara Doyle Prestwich and Eileen O Herlihy (2011) A Preliminary Investigation into how Plant Growth Promoting Rhizobacteria (PGPRs) can Inﬂuence the Frequency of Gene Transfer in Agrobacterium and Transbacter mediated Transformation Systems. 7th International Symposium on In Vitro Culture and Horticultural Breeding, Biotechnological Advances in In Vitro Horticultural Breeding 2011–09–18- 2011–09–22. • Eileen O Herlihy, Siva Linga Sasanka Velivelli, Bogumila Janczura and Barbara Doyle Prestwich (2011) Bacterial Emissions Can Lead to Healthier Plants. Irish Plant Scientists Annual Meeting, Belfast Queens University, Belfast, 2011–06–07- 2011–06–09. • Ghyselinck J, O Herlihy E, Heylen K, Velivelli, S, De Vos, P and Doyle Prestwich B. (2011) Screening for Antagonistic and Plant Growth Promoting Properties in Bacteria Isolated from the Central Andean Highlands. Ecology of Soil Microorganisms: Microbes as Important Drivers of Soil Processes 2011–04–27- 2011–05–01. • Siva Linga Sasanka Velivelli, Eileen O Herlihy, Bogumila Janczura, Barbara Doyle Prestwich, Jonas Ghyselinck and Paul De Vos (2011) Efﬁcacy of Rhizobacteria on Plant Growth Promotion and Disease Suppression. 7th International Symposium on In Vitro Culture and Horticultural Breeding, Biotechnological Advances in In Vitro Horticultural Breeding Ghent, Belgium, 2011–09–18- 2011–09–22.

Harrison, Simon

Peer Reviewed Journals • D. P. McCormick & S. S. C. Harrison (2011) ‘Direct and indirect effects of riparian canopy on juvenile Atlantic salmon, Salmo salar, and brown trout, Salmo trutta, in south-west Ireland’. Fisheries Management and Ecology, 18:445–455. • Michael M. Sturt, Marcel A.K. Jansen and Simon S.C. Harrison; (2011) ‘Responses of invertebrate grazers and algal productivity to light and nutrients’. Freshwater Biology.

Higgs, Bettie

Book Chapters • Higgs, B. (2011) ‘Navigating Wormholes: Integrative Learning on a First Year Science Field Course’ In: Connected Science. Indiana: IU Press.

Peer Reviewed Journals Return to President’s Report • Hanratty,O.,Higgs,B.,Tan, E. (2011) ‘Undergraduate Research: an Irish Perspective’. International Journal for the Scholarship of Teaching and Learning. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxi

Other Journals • Higgs, B., Burek, C.V. (2011) ‘Geoconservation: Theory and Practice’ Earth Science Ireland, 10 (10):30–30.

Higgs, Kenneth

Peer Reviewed Journals • Higgs, K. T. & Williams, B. P. J. (2011) ‘Palynology and palaeoenvironments of the Silurian Coosglass Slate and Ferriter’s Cove Formations in the Dunquin Inlier, Dingle Peninsula, Ireland’. Geological Quarterly, 55 (2):95–108. • Morrissey L. B., S. Braddy, S., Dodd, C., Higgs, K. T. & . Williams, B. P., J. (2011) ‘Trace fossils and palaeoenvironments of the Middle Devonian Caherbla Group, Dingle Peninsula, southwest Ireland’. Geological Journal.

Irwin, Sandra

Peer Reviewed Journals • Irwin, S; Wilson, M W; Kelly, T C; O’Mahony, B; Oliver, G; Troake, P; Ryan, B; Cullen, C; O’Donoghue, B; O’Halloran, J (2011) ‘The breeding biology of Hen Harriers in Ireland over a ﬁve year period’. Irish Birds, 9:165–172. • Sweeney, O F McD; Wilson, M W; Irwin, S; Kelly, T C; Gittings, T; O’Halloran, J (2011) ‘Breeding birds of native woodlands and plantation forests in Ireland’. Irish Birds, 9:181–196.

Jansen, Marcel A.K.

Book Chapters • M.A.K. Jansen; (2011) ‘UV-B radiation; from stressor to regulatory signal’ In: Plant Stress Physiology. Oxford: CABI.

Peer Reviewed Journals • Amandine Radziejwoski, Kobe Vlieghe, Tim Lammens, Barbara Berckmans, Sara Maes, Marcel Jansen, Claudia Knappe, Andreas Albert, Harald K Seidlitz, Günther Bahnweg, Dirk Inzé, Lieven De Veylder; (2011) ‘Atypical E2F activity coordinates PHR1 photolyase gene transcription with endoreduplication onset’. The EMBO journal. • Elma Lahive, John O’Halloran, Marcel A.K. Jansen; (2011) ‘Differential sensitivity of four Lemnaceae species to zinc sulphate’. Environmental Experimental Botany. Return to President’s Report • Elma Lahive, Michael J.A. O’Callaghan, Marcel A.K. Jansen, and John O’Halloran. ; (2011) ‘Uptake and partitioning of zinc in Lemnaceae’. Ecotoxicology. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxii

• Grace M. Cott, Marcel A. K. Jansen and Deborah V. Chapman. ; (2011) ‘Salt Marshes on Peat Substrate: Where Blanket Bogs Encounter the Marine Environment’. Journal of Coastal Research. • Guillaume Juhel, Emeline Batisse, Quitterie Hugues, Deirdre Daly, Frank N.A.M. van Pelt, John O’Halloran, and Marcel A.K. Jansen; (2011) ‘Alumina nanoparticles enhance growth of Lemna minor’. Aquatic Toxicology. • M. Schreiner, I. Mewis, S. Huyskens-Keil, M.A.K. Jansen, R. Zrenner, J. B. Winkler, N. O’Brien, A. Krumbein, ; (2011) ‘UV-B induced secondary plant metabolites — potential beneﬁts for plant and human health’. Critical Reviews in Plant Sciences.

• Michael M. Sturt, Marcel A.K. Jansen and Simon S.C. Harrison; (2011) ‘Responses of invertebrate grazers and algal productivity to light and nutrients’. Freshwater Biology.

• Miranda Poage, Bénédicte Le Martret, Marcel A. K. Jansen, Gregory D. Nugent and Philip J. Dix; (2011) ‘Modiﬁcation of reactive oxygen species (ROS) scavenging capacity of chloroplasts through plastid transformation’. Plant Molecular Biology.

Jones, Peter

Books • Peter Jones; (2011) The Science of Gardening. UK: Crowood Press.

Peer Reviewed Journals • Delopoulos, T,Jones, PW,Haydock, PPJ; (2011) ‘Variation in in vitro hatch of potato cyst nematodes in response to different potato cultivars inoculated with isolates of arbuscular mycorrhizal fungi’. Nematology, 13:661–672. • Milner, SE, Brunton, NP Jones, PW, O’Brien, NM, Collins, SG, Maguire, AR; (2011) ‘Bioactivities of Glycoalkaloids and their aglycones from Solanum species’. Journal of agricultural and food chemistry.

Kozachenko, Maxim

Published Reports • Kozachenko, M. and Meere, P.; (2011) Extension of onshore bedrock geology to the offshore based on existing INFOMAR data: an investigation of potential approaches and methodologies. University College Cork.

Kraak, Sarah B.M.

Peer Reviewed Journals • Kraak, SBM; (2011) ‘Exploring the ‘public goods game’ model to overcome the Tragedy of the Commons in ﬁsheries management’. Fish And Fisheries, 12:18–33. Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxiii

Lettice, Eoin

Thesis/Dissertation • Lettice, EP (2011) Student Attitudes to Web 2.0 for Teaching and Learning. Thesis/Dissertation.

Maloy, Aaron

Peer Reviewed Journals • Heaney SA, Maloy AP, Slater JW ; (2011) ‘Evaluation of fixatives and autofluorescence reduction treatments for marine bivalve larvae’. Journal of Marine Biological Association, 91 (7):1567–1576. • Maloy AP, Culloty, SC, Bolton-Warberg, M, Fitzgerald, R, Slater JW ; (2011) ‘Molecular identification of laser dissected gut contents of hatchery-reared larval cod, Gadus morhua: a new approach to diet analysis’. Aquaculture Nutrition, 17 (5):536–541.

Thesis/Dissertation • Maloy AP; (2011) Development and application of molecular-based dietary analyses for marine organisms and their larvae. Thesis/Dissertation.

Mcallen, Robert

Book Chapters • McAllen R.; (2011) ‘Abibliography of Lough Hyne Marine Reserve 1991 — 2011’ In: Davenport, J. McAllen R (Eds.). Lough Hyne Marine Reserve @ 30. University College Cork: School of BEES University College Cork.

Edited Books • Julia Davenport and Rob McAllen (Ed.). (2011) Lough Hyne Marine Reserve @ 30, University College Cork: School of BEES, University College Cork.

• Baxter, EJ,Sturt, MM,Ruane, NM,Doyle, TK,McAllen, R,Harman, L,Rodger, HD; (2011) ‘Gill Damage to Atlantic Salmon (Salmo salar) Caused by the Common Jellyﬁsh (Aurelia aurita) under Experimental Challenge’. Plos One, 6. • Hawkins, A., Knudsen, F.R., Davenport, J., McAllen, R., Bloomﬁeld, H.J., Schilt, C., Johnson, P. (2011) ‘Grazing by sprat schools upon zooplankton within an enclosed marine lake’. Journal of Experimental Marine Biology and Ecology, 411:59–65. Conference Publications • Mark Jessopp & Rob McAllen (2011) Nutrient enrichment and increased phytoplankton biomass in Lough Hyne — Is Lough Hyne Eutrophic. Lough Hyne @ 30 — Past, Present and Future Directions West Cork Hotel Skibbereen, 2011–06–03- 2011–06–04. Published Reports • Jessopp, M., McAllen, R., O’Halloran, J., Kelly, T.C.; (2011) Nutrient and Ecosystem Dynamics in Ireland’s only marine nature reserve (NEIDIN) — Report Series 66. Environmental Protection Agency, Ireland. Mcginnity, Philip

Peer Reviewed Journals • B O’Farrell, J A H Benzie, P McGinnity, J Carlsson, E de Eyto, E Dillane, C Graham, J Coughlan and T Cross (2011) ‘MHC-mediated spatial distribution in brown trout (Salmo trutta) fry’. Heredity. • Consuegra S, de Eyto E, McGinnity P, Stet RJM, Jordan WC. (2011) ‘Contrasting responses to selection in class I and class II Major Histocompatibility linked markers in salmon’. Heredity, 107:143–154. • Ensing, D., Prodohl, P.A., McGinnity, P., Boylan, P. O’Maoileidigh, N., Crozier, W.W. (2011) ‘Complex pattern of genetic structuring in the Atlantic salmon (Salmo salar L.) of the River Foyle system in northwest Ireland: disentangling the evolutionary signal from population stochasticity’. Ecology and Evolution, 1 (3):359–372. • Gurney, W.S.C., P. J. Bacon, D. C. Speirs, P. McGinnity, and E. Verspoor (2011) ‘Sea-age variation in maiden Atlantic salmon spawners: phenotypic plasticity or genetic polymorphism?’. Bulletin of Mathematical Biology. • J. S. Ellis; J. Gilbey; A. Armstrong; T. Balstad; E. Cauwelier; C. Cherbonnel; S. Consuegra (2011) ‘Microsatellite standardization and evaluation of genotyping error in a large multi-partner research programme for conservation of Atlantic salmon (Salmo salar L.)’. Nature, 139:353–367. • McGinnity, P., DeEyto, E., Gilbey, J., Gargan, P., Roche, W., Stafford, T., McGarrigle, M., O’Maoileidigh, N., Mills, P. (2011) ‘Apredictive model for estimating river habitat area using GIS-derived catchment and river variables’. Fisheries Management & Ecology. • de Eyto,E., McGinnity, P., Huisman, J., Coughlan, J., Consuegra, S., Farrell, K., O’Toole, C., Tufto, J., Megens, H-J., Jordan, W, Cross, T. Stet, R. (2011) ‘Varying disease-mediated selection at different life-history stages of Atlantic salmon in fresh water’. Evolutionary Applications. Meere, Patrick

Published Reports Return to President’s Report • Kozachenko, M. and Meere, P.; (2011) Extension of onshore bedrock geology to the offshore based on existing INFOMAR data: an investigation of potential approaches and methodologies. University College Cork. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxv

O’Halloran, John

Book Chapters • Donnelly, A, Caffarra, A, Diskin, E, Kelleher, CT, Plesters, A, Proctor, H, Stirnemann, R, Jones, MB, O’Halloran J, O’Neill, BF, Penuleas, J and Sparks, T.; (2011) ‘Climate warming results in phenotypic evolutionary changes in spring events- mini review. In press’ In: Climate Change, Ecology and Systematics. London: Cambridge University Press.

Peer Reviewed Journals • Bougaham, AF,Moulai, R,O’Halloran, J (2011) ‘Breeding biology of Grey Wagtails Motacilla cinerea at the southern edge of their breeding range (region of Bejaia, Algeria)’. Bird Study, 58:357–360. • Donaghy, AM,Green, RE,O’Halloran, J; (2011) ‘Timing of autumn migration of young Corncrakes Crex crex’. IBIS, 153:425–428. • Elma Lahive, John O’Halloran, Marcel A.K. Jansen; (2011) ‘Differential sensitivity of four Lemnaceae species to zinc sulphate’. Environmental Experimental Botany. • Elma Lahive, Michael J.A. O’Callaghan, Marcel A.K. Jansen, and John O’Halloran. ; (2011) ‘Uptake and partitioning of zinc in Lemnaceae’. Ecotoxicology. • Guillaume Juhel, Emeline Batisse, Quitterie Hugues, Deirdre Daly, Frank N.A.M. van Pelt, John O’Halloran, and Marcel A.K. Jansen; (2011) ‘Alumina nanoparticles enhance growth of Lemna minor’. Aquatic Toxicology. • O’Connell, MM, Keating, U, McElligott, D, O’Reill, P., O’Callaghan, J and O’Halloran, J (2011) ‘Aninvestigation of a novel anomalous pink feather colouration in the Mute Swan Cygnus olor in Britain and Ireland’. Wildfowl, :152–165. • O’Driscoll, D.,Skrabakova, Z.,O’Halloran, J.,van Pelt, F. N.,James, K. J.; (2011) ‘Mussels Increase Xenobiotic (Azaspiracid) Toxicity Using a Unique Bioconversion Mechanism’. Environ Sci Technol. • Sandra Irwin, Mark W. Wilson, Thomas C. Kelly, Barry O’Mahony, Geoff Oliver, Paul Troake, Barry Ryan, Chris Cullen, Barry O’Donoghue, John O’Halloran (2011) ‘The breeding biology of Hen Harriers Circus cyaneus in Ireland over a ﬁve year period’. Irish Birds, :165–172. • Sweeney, O.F.McD; Wilson, M.W; Irwin, S; Kelly, T.C; Gittings, T. and O’Halloran, J (2011) ‘Breeding birds of native woodlands and plantation forests in Ireland’. Irish Birds.

O’Herlihy, Eileen

Peer Reviewed Journals Return to President’s Report • Doyle Prestwich, Barbara and O’ Herlihy, Eileen (2011) ‘Apreliminary investigation into how plant growth promoting rhizobacteria (PGPRs) can inﬂuence the frequency of gene transfer in Agrobacteriumand Transbacter mediated transformation systems’. Acta Horticultura. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxvi

• O Herlihy, E., Doyle Prestwich, B. and Wall G. ; (2011) ‘Anin vitro study to examine the potential of mutation breeding to create resistance to bacterial wilt (Ralstonia solanacearum) in tomato’. Acta Horticultura. • Velivelli, S., O Herlihy, E.O., Janczura, B., Doyle Prestwich, B., Ghyselinck, J and De Vos, P. ; (2011) ‘Efﬁcacy of Rhizobacteria on Plant Growth Promotion and Disease Suppression In Vitro’. Acta Horticultura.

Conference Publications • Barbara Doyle Prestwich and Eileen O’ Herlihy ; (2011) A preliminary investigation into how plant growth promoting rhizobacteria (PGPRs) can inﬂuence the frequency of gene transfer in Agrobacterium and Transbacter mediated transformation systems. 7th International Symposium on In Vitro Culture and Horticultural Breeding, ‘Biotechnological advances in In Vitro Horticultural Breeding’,Ghent, Belgium, 18th — 22nd Sept.

• Eileen O’ Herlihy, Siva Linga Sasanka Velivelli, Bogumila Janczura and Barbara Doyle Prestwich; (2011) Bacterial emissions can lead to healthier plants. Irish Plant Scientists Annual Meeting, Queen’s University Belfast, 7th — 9th June 2011. • Ghyselinck, J., O’ Herlihy E., Heylen K., Velivelli, S., De Vos P., Doyle Prestwich, B.; (2011) Screening for antagonistic and plant growth promoting properties in bacteria isolated from the Central Andean highlands. Ecology of Soil Microorganisms: Microbes as Important Drivers of Soil Processes. Prague, Czech Republic, 27th April — 1st May. • Siva Linga Sasanka Velivelli1, Eileen O’ Herlihy, Bogumila Janczura, Barbara Doyle Prestwich, Jonas Ghyselinck and Paul De Vos ; (2011) Efﬁcacy of Rhizobacteria on Plant Growth Promotion and Disease Suppression In vitro. 7th International Symposium on In Vitro Culture and Horticultural Breeding, ‘Biotechnological advances in In Vitro Horticultural Breeding’,Ghent, Belgium, 18th — 22nd Sept.

O’Mahoney, Maria

Peer Reviewed Journals • O’Mahoney, M., Mouzakitis, G., Doyle, J. & Burnell, G.; (2011) ‘Akonjac glucomannan-xanthan gum binder for aquaculture feeds: The effect of binder conﬁguration on formulated feed stability, feed palatability and growth performance of the Japanese abalone, Haliotis discus hannai’. Aquaculture Nutrition, 17 (4):395–407.

Ramsay, Ruth

Peer Reviewed Journals • Fermer, J,Culloty, SC,Kelly, TC,O’riordan, RM; (2011) ‘Parasitological survey of the edible cockle Cerastoderma edule (Bivalvia) on the south coast of Ireland’. Journal of The Marine Biological Association of The United Kingdom, 91:923–928.

Return to • Fermer, J; Culloty, SC; Kelly, TC; O’Riordan, RM; (2011) ‘Manipulation of Cerastoderma edule burrowing ability by Meiogymnophallus minutus President’s Report metacercariae’. Journal of The Marine Biological Association of The United Kingdom, 91 (4):907–911. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxvii

• Haigh, A; Butler, F; O’Riordan, R (; (2011) ‘Habitat use by the European hedgehog (Erinaceus europaeus, Linnaeus, 1758) in an Irish rural landscape’. The Irish Naturalists’ Journal. • Lyons, LJ; O’Riordan, RM; Cross, TF; Culloty, SC ; (2011) ‘Reproductive biology of the shore crab Cacinus maenas (Decapoda, Portunidae): a macroscopic and histological view’. Invertebrate Reproduction and Development. • Morgan E., O’Riordan R.M., Kelly, T.C., Culloty S.C. (2011) ‘The inﬂuence of disseminated neoplasia, trematode infections and gametogenesis on surfacing and mortality in the common cockle Cerastoderma edule’. Diseases of Aquatic Organisms.

• Power, AM; McCrann, K; McGrath, D; O’Riordan, RM; Simkanin, C; Myers, AA ; (2011) ‘Physiological tolerance predicts species compostion at different scales in a barnacle guild’. Marine Biology.

• Prinz, K; Kelly, TC; O’Riordan, RM; Culloty, SC; (2011) ‘Factors inﬂuencing cercarial emergence and settlement in the digenean trematode Parorchis acanthus (Philophthalmidae)’. Journal of The Marine Biological Association of The United Kingdom, 91 (8):1673–1679.

• Quirke, T & O’Riordan, R.M. (2011) ‘The effect of a randomised enrichment treatment schedule on the behaviour of cheetahs (Acinonyx jubatus)’. Applied Animal Behaviour Science, 135:103–109.

• Quirke, T; O’Riordan, RM ; (2011) ‘The effect of different types of enrichment on the behaviour of cheetahs in captivity’. Applied Animal Behaviour Science, 133 (1–2):87–94.

Rogan, Emer

Peer Reviewed Journals • Carlsson, J. , Shephard, S., Coughlan, J., N. Trueman, C., Rogan, E., Cross, T.F.; (2011) ‘Fine-scale population structure in a deep-sea teleost (orange roughy, Hoplostethus atlanticus)’. Deep Sea Research Part I, 58 (6):627–636. • Foote, A.D., Vilstrup, J.T., De Stephanis, R., Verborgh, P., Abel Nielsen, S.C., Deaville, R., Kleivane, L., Marti«n, V., Miller, P.J.O., ien, N., Pérez-Gil, M., Rasmussen, M., Reid, R.J., Robertson, K.M., Rogan, E., Similä, T., Tejedor, M.L., Vester, H., Víkingsson, G.A., Willerslev, E., Gilbert, M.T.P., Piertney, S.B.; (2011) ‘Genetic differentiation among North Atlantic killer whale populations’. Molecular Ecology, 20 (3):629–641. • L. Mirimin, R. Miller, E. Dillane, S. D. Berrow, S. Ingram, T. F. Cross & E. Rogan; (2011) ‘Fine-scale population genetic structuring of bottlenose’. Animal Conservation. • Mirimin, L., Banguera-Hinestroza, E., Dillane, E., Hoelzel, A.R., Cross, T.F., Rogan, E.; (2011) ‘Insights into genetic diversity, parentage, and group composition of Atlantic white-sided dolphins (Lagenorhynchus acutus) off the west of Ireland based on nuclear and mitochondrial genetic markers’. Journal of Heredity. Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxviii

Wheeler, Andrew

Book Chapters • Wheeler, A.J. & Stadnitskaya, A. ; (2011) ‘Benthic deep-sea carbonates: reefs and seeps’ In: Heiko Hüneke & Thierry Mulder (Eds.). Deep-Sea Sediments (a book of the series Developments in Sedimentology). Amsterdam: Elsevier.

Peer Reviewed Journals • Foubert, A,Huvenne, VAI,Wheeler, A,Kozachenko, M,Opderbecke, J,Henriet, JP; (2011) ‘The Moira Mounds, small cold-water coral mounds in the Porcupine Seabight, NE Atlantic: Part B Evaluating the impact of sediment dynamics through high-resolution ROV-borne bathymetric mapping’. Marine Geology, 282:65–78. • López Correa, M., Montagna, P., Joseph, N., Rüggeberg, A., Fietzke, J., Flögel, S., Dorschel, B., Goldstein, S.L., Wheeler, A., Freiwald, A. (2011) ‘Preboreal onset of cold-water coral growth beyond the Arctic Circle revealed by coupled radiocarbon and U-series dating and neodymium isotopes’. Quaternary Science Reviews. • M. Thierens, H. Pirlet, C. Colin, K. Latruwe, F. Vanhaecke, J.R. Lee, J.-B. Stuut, J. Titschack, V.A.I. Huvenne, B. Dorschel, A.J. Wheeler, J.-P., Henriet (2011) ‘Ice-rafting from the British-Irish ice sheet since the earliest Pleistocene (2.6 million years ago): implications for long-term mid-latitudinal ice-sheet growth in the North Atlantic region’. Quaternary Science Reviews. • Van Landeghem, K.J.J., Baas, J.H., Mitchell, N.C., Wilcockson, D., Wheeler, A.J. (2011) ‘Reversed sediment wave migration in the Irish Sea, NW Europe: a reappraisal of the validity of geometry-based predictive modelling and assumptions’. Marine Geology.

Whelan, Padraig

Peer Reviewed Journals • Kirrane, MJ,De Guzman, LI,Rinderer, TE,Frake, AM,Wagnitz, J,Whelan, PM; (2011) ‘Asynchronous Development of Honey Bee Host and Varroa destructor (Mesostigmata: Varroidae) Inﬂuences Reproductive Potential of Mites’. Journal of Economic Entomology, 104:1146–1152.

Conference Publications • Thompson, R., Dolan, L. M. J., Emmerson, M., Dauber, J., Stout, J., Bourke, D., Whelan, P.M. (2011) Assemblage structure of plant communities along the road corridor: rock and scree slopes — planting versus natural recolonisation. International Conference on Ecology and Transportation 2011 — sustainability in motion.

Wilson, Mark

Peer Reviewed Journals • Sandra Irwin, Mark W. Wilson, Thomas C. Kelly, Barry O’Mahony, Geoff Oliver, Paul Troake, Barry Ryan, Chris Cullen, Barry O’Donoghue, John O’Halloran (2011) ‘The breeding biology of Hen Harriers Circus cyaneus in Ireland over a ﬁve year period’. Irish Birds, :165–172. Return to President’s Report • Sweeney, O F McD; Wilson, M W; Irwin, S; Kelly, T C; Gittings, T; O’Halloran, J (2011) ‘Breeding birds of native woodlands and plantation forests in Ireland’. Irish Birds, 9:181–196. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science clxxxix

• Wilson, M.W. Gittings, T. Pithon, J. Kelly, T. C. Irwin, S. O’Halloran, J. (2011) ‘Bird diversity of afforestation habitats in Ireland: current trends and likely impacts’. Biology and Environment: Proceedings of Royal Irish Academy. School of Computer Science and Information Technology

Bridge, Derek

Peer Reviewed Journals • Walid Trabelsi and Nic Wilson and Derek Bridge and Francesco Ricci (2011) ‘Preference Dominance Reasoning for Conversational Recommender Systems: a comparison between a comparative preferences and a sum of weights approach’. International Journal on Artiﬁcial Intelligence Tools, 20 (4):591–616.

Conference Publications • Lisa Cummins and Derek Bridge (2011) Choosing a Case Base Maintenance Algorithm using a Meta-Case Base. In: M. Bramer and M. Petridis and L. Nolle eds. Research and Development in Intelligent Systems XXVIII (Procs. of AI-2011, The Thirty-ﬁrst SGAI International Conference on Innovative Techniques and Applications of Artiﬁcial Intelligence). • Lisa Cummins and Derek Bridge (2011) On Dataset Complexity for Case Base Maintenance. In: Ashwin Ram and Nirmalie Wiratunga eds. Case-Based Reasoning Research and Development (Procs. of the 19th International Conference on Case-Based Reasoning).

Fitzgerald, William Michael

Peer Reviewed Journals • Fitzgerald, WM; Foley, SN; (2011) ‘Aligning Semantic Web Applications with Network Access Controls’. International Journal on the Development and Application of Standards for Computers, Software, 33 (1). • S.N. Foley and W.M. Fitzgerald; (2011) ‘Management of Security Policy Conﬁguration using a Semantic Threat Graph Approach’. Journal of Computer Security, 19 (3):567–605.

Foley, Simon

Peer Reviewed Journals • Carles Martínez-García, Guillermo Navarro-Arribas, Simon N. Foley, Vicenç Torra, Joan Borrell; (2011) ‘Flexible secure inter-domain interoperability through attribute conversion’. Information Sciences, 181 (16):3491–3509. • Fitzgerald, WM; Foley, SN; (2011) ‘Aligning Semantic Web Applications with Network Access Controls’. International Journal on the Development and Application of Standards for Computers, Software, 33 (1). • H Zhou and S.N. Foley; (2011) ‘Fast Automatic Security Protocol Generation’. Journal of Computer Security. Return to President’s Report • S.N. Foley and W.M. Fitzgerald; (2011) ‘Management of Security Policy Conﬁguration using a Semantic Threat Graph Approach’. Journal of Computer Security, 19 (3):567–605. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxc

• S.N. Foley and S. Abdi; (2011) Avoiding Delegation Subterfuge using Linked Local Permission Names. 8th International Workshop on Formal Aspects of Security and Trust (FAST2011). • S.N. Foley and W Mac Adams; (2011) Trust Management of XMPP Federation. IFIP/IEEE Workshop on Managing Federations and Cooperative Management.

Herbert, John

Conference Publications • Bingchuan Yuan, John Herbert; (2011) Non-intrusive Movement Detection in CARA Pervasive Healthcare Application. The 2011 International Conference on Wireless Networks (ICWN’11). • Bingchuan Yuan, John Herbert; (2011) Real-Time Interactive Medical Consultation Using a Pervasive Healthcare Architecture. The 9th International Conference on Smart Homes and Health Telematics (ICOST 2011). • Bingchuan Yuan, John Herbert; (2011) Web-based Real-time Remote Monitoring for Pervasive Healthcare. Workshop on Smart Environments to Enhance Health Care (SmartE 2011) in IEEE International Conference on Pervasive Computing and Communications(Percom2011).

Jansen, Thomas

• Thomas Jansen; (2011) ‘Simulated Annealing’ In: Anne Auger, Benjamin Doerr (Eds.). Theory of Randomized Search Heuristics. Singapore: World Scientiﬁc.

Peer Reviewed Journals • Thomas Jansen and Christine Zarges; (2011) ‘Analyzing different variants of immune inspired somatic contiguous hypermutations’. Theoretical Computer Science, 412 (6):517–533.

• Thomas Jansen and Christine Zarges; (2011) ‘On Beneﬁts and Drawbacks of Aging Strategies for Randomized Search Heuristics’. Theoretical Computer Science, 412 (6):543–559.

• Thomas Jansen and Christine Zarges; (2011) ‘On the role of age diversity for effective aging operators’. Evolutionary Intelligence. Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxci

Conference Publications • Thomas Jansen and Christine Zarges; (2011) Analysis of evolutionary algorithms: From computational complexity analysis to algorithm engineering. In: Hans-Georg Beyer and William Langdon eds. 11th ACM SIGEVO Workshop on Foundations of Genetic Algorithms (FOGA 2011).

• Thomas Jansen and Christine Zarges; (2011) Variation in artiﬁcial immune systems: Hypermutations with mutation potential. Proceedings of the 10th International Conference on Artiticial Immune Systems (ICARIS 2011). • Thomas Jansen and Pietro S. Oliveto and Christine Zarges; (2011) On the analysis of the immune-inspired B-cell algorithm for the vertex cover problem. Proceedings of the 10th International Conference on Artiticial Immune Systems (ICARIS 2011).

Morrison, John

Peer Reviewed Journals • Deepak Ajwani, John Morrison ; (2011) ‘AFlexible workload generator for simulating stream computing systems’.

Murphy, David

Book Chapters • David Murphy and Flaithri Neff; (2011) ‘Spatial Sound for Computer Games and Virtual Reality’ In: Mark Grimshaw (Eds.). Game Sound Technology and Player Interaction: Concepts and Developments. UK: IGI Global.

O’Donovan, Tony

Peer Reviewed Journals • T. O’Donovan and U. Roedig and J. Benson and C.J. Sreenan; (2011) ‘Self-Adaptive Framelet Based Communication for Wireless Sensor Networks’. Computer Networks, 55 (11):2558–2575.

Conference Publications • J. Brown and U. Roedig and T. O’Donovan and C. J. Sreenan and Z. He and T. Voigt and B. Pöttner and L. Wolf and A. Klein and J. Sá Silva and V. Vassiliou and J. do Ó; (2011) (Poster) GINSENG: Performance Control in Wireless Sensor Networks. Eighth European Conference on Wireless Sensor Networks (EWSN2011) Bonn, Germany. • T. O’Donovan and C.J. Sreenan (2011) Deployment Alternatives for Performance Debugging in Wireless Sensor Networks. IEEE SENSORS 2011 Conference Limerick, Ireland. • W-B. Pöttner and L. Wolf and J. Cecilio and P. Furtado and R. Silva and J. Sá Silva and A. Santos and P. Gil and A. Cardoso and Z. Zinonos and J. do Ó and B. McCarthy and J. Brown and U. Roedig and T. O’Donovan and C. J. Sreenan and Z. He and T. Voigt and A. Klein; (2011) WSN Evaluation in Return to Industrial Environments First Results and Lessons Learned. Third International Workshop on Performance Control in Wireless Sensor Networks President’s Report (PWSN2011). UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxcii

O’Mullane, John J.

Conference Publications • Aidan Sliney, David Murphy, John O’Mullane; (2011) Adaptive Serious Games: Move Over Maladaptive Assessment. 5th European Conference on Games Based Learning. • Elaine Corkery, Kathleen O’Sullivan, John O’Mullane; (2011) Examining the Use of the Academic Conﬁdence Scale in a Student Population. CASI 2011. • Elaine Corkery, Kathleen O’Sullivan, John O’Mullane; (2011) Undergraduate Perspectives of Dimensions of Teaching and Learning. YSI 2011. • Laura O’Sullivan, Kathleen O’Sullivan, John O’Mullane, Jamie Madden, Sarah Murphy, Michael Carroll; (2011) Revealing Undergraduate Student Groups. CASI 2011. • Michael Carroll, Kathleen O’Sullivan, John O’Mullane, Jamie Madden, Sarah Murphy, Laura O’Sullivan; (2011) Are There Clusters of Undergraduate Experiences? YSI 2011.

Published Reports • David O’Sullivan, Mike Murphy, Kathleen O’Sullivan, John O’Mullane; (2011) UCC Student Experience. 2011 Survey Undergraduates’ experience: In their own words. UCC. • Kathleen O’Sullivan, John O’Mullane, Elaine Corkery, Mike Murphy, David O’Sullivan; (2011) Report on the Quantitative Aspects of the College of Arts, Celtics Studies and Social Sciences Undergraduate Student Experience 2011. UCC. • Kathleen O’Sullivan, John O’Mullane, Elaine Corkery, Mike Murphy, David O’Sullivan; (2011) Report on the Quantitative Aspects of the College of Business and Law Undergraduate Student Experience 2011. UCC. • Kathleen O’Sullivan, John O’Mullane, Elaine Corkery, Mike Murphy, David O’Sullivan; (2011) Report on the Quantitative Aspects of the College of Medicine and Health Undergraduate Student Experience 2011. UCC. • Kathleen O’Sullivan, John O’Mullane, Elaine Corkery, Mike Murphy, David O’Sullivan; (2011) Report on the Quantitative Aspects of the College of Science, Engineering & Food Science Undergraduate Student Experience 2011. UCC. • Kathleen O’Sullivan, John O’Mullane, Elaine Corkery, Mike Murphy, David O’Sullivan; (2011) Report on the Quantitative Aspects of the UCC Undergraduate Student Experience 2011. UCC.

O’Riordan, Adrian

Peer Reviewed Journals • O’Riordan, A (2011) ‘Aspect-Oriented Reengineering of an Object-oriented Library in a Short Iteration Agile Process’. Informatica, 35 (4):499–512. Return to President’s Report • O’Riordan, A., O’Mahoney, O.; (2011) ‘Engineering an Open Web Syndication Interchange with Discovery and Recommender Capabilities’. Jnl. Digital Information, 12 (1). UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxciii

Conference Publications • O’Riordan, A; Murphy, D.; (2011) Spike: A Digital Cultural Heritage Case Study. ASIS & T European Workshop (AEW) 2011 Cork, 2011–06–01- 2011–06–02.

O’Sullivan, Barry

Peer Reviewed Journals • Cambazard, H., Horan, J., O’Mahony, E., O’Sullivan, B. (2011) ‘Domino portrait generation: A fast and scalable approach’. Annals of Operations Research, 184 (1):79–95. • Finkel, Raphael and O’Sullivan, Barry (2011) ‘Reasoning about conditional constraint specification problems and feature models’. Ai Edam-Artificial Intelligence for Engineering Design Analysis and Manufacturing, 25 (2):163–174. • Hebrard, Emmanuel and Marx, Daniel and O’Sullivan, Barry and Razgon, Igor (2011) ‘Soft Constraints of Difference and Equality’. Journal of Artificial Intelligence Research, 41.

Prestwich, Steven David

Peer Reviewed Journals • R. Rossi, S. A. Tarim, B. Hnich, S. Prestwich; (2011) ‘Constraint Programming for Stochastic Inventory Systems under Shortage Cost’. Annals of Operations Research. • S. D. Prestwich, S. A. Tarim, R. Rossi, B. Hnich; (2011) ‘ANeuroevolutionary Approach to Stochastic Inventory Control in Multi-Echelon Systems’. International Journal of Production Research.

Conference Publications • B. Kawas, M. Laumanns, E. Pratsini, S. Prestwich; (2011) Risk Averse Production Planning. 2nd International Conference on Algorithmic Decision Theory. • R. Rossi, B. Hnich, S. A. Tarim, S. Prestwich; (2011) Finding (α,ϑ)-solutions via Sampled SCSP. International Joint Conference on Artiﬁcial Intelligence. • R. Rossi, S. A. Tarim, B. Hnich, S. Prestwich; (2011) Solving the Newsvendor Problem under Partial Demand Information. 12th Congres Annuel de la Societe Francaise de Recherche Operationnelle et d’Aide a la Decision (ROADEF).

Provan, Gregory

Conference Publications

Return to • Alie El-Din Mady, Gregory M. Provan, Conor Ryan and Kenneth N. Brown; (2011) Stochastic Model Predictive Controller for the Integration of President’s Report Building Use and Temperature Regulation. Conference of Association for the Advancement of Artiﬁcial Intelligence (AAAI) San Francisco, CA, USA, 2011–08–07- 2011–08–11. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxciv

Quesada, Luis

Conference Publications • Deepak Mehta, Barry O’Sullivan, Luis Quesada (2011) Value Ordering for Finding All Solutions: Interactions with Adaptive Variable Ordering. CP 2011. • Deepak Mehta, Barry O’Sullivan, Luis Quesada, Marco Rufﬁni, David Payne, Linda Doyle (2011) Designing Resilient Long-Reach Passive Optical Networks. AAAI/IAAI 2011. • Hadrien Cambazard, Deepak Mehta, Barry O’Sullivan, Luis Quesada (2011) A Computational Geometry-based Local Search Algorithm for Planar Location Problems. CP 2011 — 8th Workshop on Local Search Techniques in Constraint Satisfaction.

• Hadrien Cambazard, Deepak Mehta, Barry O’Sullivan, Luis Quesada, Marco Rufﬁni, David Payne, Linda Doyle (2011) A Combinatorial Optimisation Approach to the Design of Dual Parented Long-Reach Passive Optical Networks. AICS 2011.

• Marco Rufﬁni, Barry O’Sullivan, Deepak Mehta, Luis Quesada, F. Farjady, N. Doran, David Payne (2011) A protected LR-PON deployment for the UK EPSRC photonic communications workshop.

Sreenan, Cormac

Peer Reviewed Journals • S. Fedor, M. Collier, C.J. Sreenan.; (2011) ‘Cross-Layer Routing and Time Synchronisation in Wireless Sensor Networks’. International Journal of Sensor Networks. • Y. Zeng, C.J. Sreenan, L. Sitanayah, N. Xiong, J-H Park, G. Zheng.; (2011) ‘AnEmergency-Adaptive Routing Scheme for Wireless Sensor Networks for Building Fire Hazard Monitoring’. Sensors, 11 (3):2899–2919.

Conference Publications • A. Zahran, C.J. Sreenan.; (2011) Extended Handover Keying and Modiﬁed IEEE 802.21 Resource Query Approach for Improving Vertical Handoff Performance. Fourth IFIP International Conference on New Technologies, Mobility and Security (NTMS). • E. Mercadal, S. Robles, R. Marti, C.J. Sreenan, J. Borrell.; (2011) Heterogeneous Multiagent Architecture for Dynamic Triage of Victims in Emergency Scenarios. 9th Conference on Practical Applications of Agents and Multi-Agent Systems (PAAMS). • J. Brown, B. McCarthy, U. Roedig, T. Voigt, C.J. Sreenan.; (2011) BurstProbe: Debugging Time-Critical Data Delivery in Wireless Sensor Networks. 8th European Conference on Wireless Sensor Networks (EWSN).

Return to • P. Davern, N. Nashid, A. Zahran, C.J. Sreenan.; (2011) HTTP acceleration over high latency links. Fourth IFIP International Conference on New President’s Report Technologies, Mobility and Security (NTMS). UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxcv

• X. Wu, K.N. Brown, C.J. Sreenan.; (2011) Exploiting Rush Hours for Energy-Efﬁcient Contact Probing in Opportunistic Data Collection. IEEE 31th International Conference on Distributed Computing System (ICDCS) — Workshop on Sensor Networks. • X. Wu, K.N. Brown, C.J. Sreenan.; (2011) SNIP: A Sensor Node-Initiated Probing Mechanism for Opportunistic Data Collection in Sparse Wireless Sensor Networks. IEEE INFOCOM — First International Workshop on Cyber-Physical Networking Systems.

Tabirca, Marius-Sabin

Peer Reviewed Journals • D.Daly, S.Tabirca; (2011) ‘NFC — The Final Push’. Ubiquitous Computing and Communication Journal (UBICC). • R. Bocu, S. Tabirca; (2011) ‘The Flag-based Algorithm — A Novel Greedy Method that Optimizes Protein Communities Detection’. Int. J. of Computers, Communications & Control, 6 (1):20–31. • Simon Rajendran, Slawomir Salwa, Xuefeng Gao, Sabin Tabirca, Deirdre O’Hanlon, Gerald C. O’Sullivan, Mark Tangney; (2011) ‘Ex Vivo Culture of Patient Tissue & Examination of Gene Delivery’. Journal of Visualized Experiments.

Conference Publications • Xuefeng Gao, SabinTabirca, Mark Tangney; (2011) A Multiscale Model for Hypoxia-induced Avascular Tumor Growth. In: IEEE eds. 2011 International Conference on Bioscience, Biochemistry and Bioinformatics.

Wilson, Nic

Peer Reviewed Journals • Nic Wilson (2011) ‘Computational Techniques for a Simple Theory of Conditional Preferences’. Artiﬁcial Intelligence Journal, 175 (7–8):1053–1091. • Trabelsi, W; Wilson, N; Bridge, D; Ricci, F; (2011) ‘Preference Dominance Reasoning for Conversational Recommender Systems: A Comparison Between a Comparative Preferences and a Sum of Weights Approach’. International Journal On Artiﬁcial Intelligence Tools, 20 (4):591–616.

Conference Publications • Marinescu, R; Wilson, N; (2011) Order-of-Magnitude Inﬂuence Diagrams. 27th Conference on Uncertainty in Artiﬁcial Intelligence (UAI 2011). • Wilson, N; Trabelsi, W; (2011) Pruning Rules for Constrained Optimisation for Conditional Preferences. 17th International Conference on Principles and Practice of Constraint Programming (CP 2011). School of Engineering

Borthwick, Alistair George Liam

Peer Reviewed Journals Return to President’s Report • Hunt-Raby, A.C., Borthwick, A.G.L., Stansby, P.K. and Taylor, P.H. (2011) ‘Experimental measurement of focused wave group and solitary wave overtopping’. Journal of Hydraulic Research, 49 (4):450–464. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxcvi

• Jiang L., Borthwick A.G.L., Krámer T. and Józsa J. (2011) ‘Variable density bore interaction with block obstacles’. International Journal of Computational Fluid Dynamics, 25 (4):223–237. • Lee, W.-K., Borthwick A.G.L. and Taylor P.H. (2011) ‘Afast adaptive quadtree scheme for a two-layer shallow water model’. Journal of Computational Physics, 230:4848–4870. • Liang D. Borthwick A.G.L., and Romer-Lee J.K. (2011) ‘Run-up of solitary waves on twin conical islands using a Boussinesq model’. Offshore Mechanics & Arctic Engineering (OMAE), 134 (1).

• Liu R. and Borthwick A.G.L. (2011) ‘Measurement and assessment of carrying capacity of the environment in Ningbo, China’. Journal of environmental management, 92:2047–2053.

• Miao C., Ni J., Borthwick A.G.L., and Yang L. (2011) ‘Apreliminary estimate of human and natural contributions to the changes in water discharge and sediment load in the Yellow River’. Global and Planetary Change, 76 (3–4):196–205.

• Vaziri N., Chern M.-J., and Borthwick A.G.L. (2011) ‘Pseudospectral σ-transformation model of solitary waves in a tank with uneven bed’. Computers & Fluids, 49 (1):197–202. • Zhou, J.G. and Borthwick A.G.L. (2011) ‘Lattice Boltzmann method for variable density shallow water equations’. Computers & Fluids, 49 (1):146–149.

Byrne, Edmond

Book Chapters • Cronin, K. and Byrne, E. ; (2011) ‘Plant and Equipment | Flow Equipment: Valves’ In: Fuquay, J.W., Fox, P.F. and McSweeney, P.L.H (Eds.). Encyclopedia of Dairy Sciences, Second Edition. San Diego, USA: Academic Press.

Peer Reviewed Journals • Bas, N., Pathare, P.B., Catak, M., Fitzpatrick, J.J., Cronin, K., Byrne, E.P. ; (2011) ‘Mathematical modelling of granola breakage during pipe pneumatic conveying’. Powder Technology. • Catak, M., Bas, N., Cronin, K., Fitzpatrick, J.J., Byrne, E.P., ; (2011) ‘Discrete solution of aggregation equation using Markov chains’. Chemical Engineering Research and Design. • Fitzpatrick, J., Cronin, K. and Byrne, E; (2011) ‘Is attending lectures still relevant in engineering education?’. European Journal of Engineering Education, 36 (3):301–312.

• Hanley, K.J., Byrne, E.P., Cronin, K., Oliveira, J.C., O’Mahony, J.A., and Fenelon, M.A; (2011) ‘Effect of pneumatic conveying parameters on physical quality characteristics of infant formula’. Journal of Food Engineering.

• Hanley, K.J., Cronin, K., O’Sullivan, C., Fenelon, M.A., O’Mahony, J.A. and Byrne, E.P. ; (2011) ‘Effect of composition on the mechanical response of Return to agglomerates of infant formulae’. Journal of Food Engineering, 107:71–79. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxcvii

• Hanley, K.J., O’Sullivan, C., Oliveira, J.C., Cronin, K., & Byrne, E.P; (2011) ‘Application of Taguchi methods to DEM calibration of bonded agglomerates’. Powder Technology, 210:230–240. • Macedo, I.S.M, Sousa-Gallagher, M.J., Oliveira, J. C. and Byrne, E.P; (2011) ‘Shelf life aspects of toasted breakfast cereal with and without fruit’. Italian Journal of Food Science, (Special Issue):178–181. • Riedewald, F., Byrne, E. and Cronin, K.; (2011) ‘Comparison of Deterministic and Stochastic Simulation for Capacity Extension of High Purity Water Delivery Systems’. PDA Journal of Science & Technology. • Riedewald, F., Byrne, E. and Cronin, K; (2011) ‘AFuzzy Logic Model of Deionised and Water for Injection Systems for Sizing and Capacity Assessment under Uncertainty’. Journal of Pharmaceutical Innovation. • Riedewald, F., Byrne, E. and Cronin, K; (2011) ‘AStochastic Model for Performance Analysis of Pharmaceutical High Purity Water Systems’. Simulation Modelling Practice and Theory. Cantillon-Murphy, Padraig

Peer Reviewed Journals • M. Ryou, P. Cantillon-Murphy, D. Azagury, S.N. Shaikh, G Ha, I. Greenwalt, M.B. Ryan, J.H. Lang, C.C. Thompson; (2011) ‘Smart Self-Assembling MagnetS for ENdoscopy (SAMSEN) for transoral endoscopic creation of immediate gastrojejunostomy (with video)’. Gastrointestinal Endoscopy, 73:353–359. Conference Publications • K. O’Donoghue and P. Cantillon-Murphy; (2011) Can Permanent Magnets Aid in Minimally-Invasive Procedures? Joint Workshop on New Technologies for Computer/Robot Assisted Surgery Graz, Austria. Online Multimedia • P. Cantillon-Murphy; (2011) When doctors and engineers talk (TEDxUCC). Other • P. Cantillon-Murphy; (2011) Novel Uses for Magnets in Minimally-Invasive Surgery. Other. De Sousa Gallagher, Maria J

Book Chapters • Sousa-Gallagher Maria J. and Mahajan Pramod V. (2011) ‘Stability and Shelf Life of Fruit and Vegetables’ In: Kilcast & Subramaniam (Eds.). Food and Beverage Stability and Shelf-Life. Cambridge, UK: Woodhead Publishing Ltd. • Sousa-Gallagher Maria J., Mahajan Pramod V. and Yan Zhengyong ; (2011) ‘Modelling Chemical and Physical Deterioration of Foods and Beverages’ In: Kilcast & Subramaniam (Eds.). Food and Beverage Stability and Shelf Life. Cambridge, UK: Woodhead Publishing Ltd. Return to President’s Report • Sousa-Gallagher, Maria José; Monteiro, Magali; Kopper Gisela (2011) ‘Embalagens para bebidas’ In: Waldemar Gastoni Venturi Fillo (Eds.). Industria de Bebidas: innovacao, gestao e producao. Sao paulo, Brasil: Blucher. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxcviii

Peer Reviewed Journals • Atares L, Gallagher MJS, Oliveira FAR; (2011) ‘Process conditions effect on the quality of banana osmotically dehydrated’. Rna-A Publication of The Rna Society, 103:401–408.

• Atares, L., Sousa Gallagher, M.J. and Oliveira, F.A.R; (2011) ‘Process Conditions effect on the quality of banana osmotically dehydrated’. J. Food Engineering, 103:401–408. • Macedo, I.S.M, Sousa-Gallagher, M.J., Oliveira, J. C. and Byrne, E.P; (2011) ‘Shelf life aspects of toasted breakfast cereal with and without fruit’. Italian Journal of Food Science, (Special Issue):178–181. • Mahajan P.V. and Sousa-Gallagher M.J. (2011) ‘The impact of proportion of different cut-fruits on respiration rate of fruit salad’. Acta Horticulturae.

• Mahajan P.V. and Sousa-Gallagher M.J. (2011) ‘Analysisof commercially available packages of fresh-cut fruits’. Acta Horticulturae.

Conference Publications • Henriques S. S., Sousa-Gallagher M. J., Barbosa T. M., Gomes A. M. (2011) Incorporation of encapsulated probiotics in a cereal bar: Viability assessment after food processing and during storage. Eurocereal 2011 Champden BRI, 2011–12–06- 2011–12–07. • Macedo I.S.M. Sousa-Gallagher M.J., Mahajan P.V., Byrne E.P.; (2011) Kinetic modelling of quality decay of granulated breakfast cereal during storage. In: E. Cummins, J. M. Frias, V. P. Valdramidis eds. 7th International Conference on Predictive Modelling of Food Quality and Safety Dublin, Ireland, 2011–09–13- 2011–09–15.

• Macedo I.S.M., Sousa-Gallagher M.J., Oliveira J.C., Mahajan P.V., Byrne E.P. ; (2011) Quality by design for packaging of granola breakfast product. In: E. Cummins, J. M. Frias, V. P. Valdramidis eds. 7th International Conference on Predictive Modelling of Food Quality and Safety Dublin, Ireland, 2011–09–13- 2011–09–15.

• Mahajan P.V. and Sousa-Gallagher M. J. (2011) Integrative Mathematical Modelling for Packaging Design of Fresh Produce. In: E. Cummins, J. M. Frias, V. P. Valdramidis eds. 7th International Conference on Predictive Modelling of Food Quality and Safety Dublin, Ireland, 2011–09–13- 2011–09–15.

• Oliveira F., Sousa-Gallagher M. J., Mahajan P. V., Teixeira J. C. ; (2011) Development of shelf life predictive model for fresh-cut produce. In: E. Cummins, J. M. Frias, V. P. Valdramidis eds. 7th International Conference on Predictive Modelling of Food Quality and Safety Dublin, Ireland, 2011–09–13- 2011–09–15.

• Oliveira F., Sousa-Gallagher M.J., Mahajan P.V., Teixeira J.A.; (2011) Evaluation of MAP design parameters on quality of fresh-cut produce. In: P. S. Taoukis, N. G. Stoforos, V.T. Karathanos,G. D. Saravacos eds. 11th International Congress on Engineering and Food (ICEF11) Athens, Greece, 2011–05–22- 2011–05–26.

Fitzpatrick, John

Peer Reviewed Journals Return to President’s Report • Bas, N., Pathare, P.B., Catak, M., Fitzpatrick, J.J., Cronin, K., Byrne, E.P. ; (2011) ‘Mathematical modelling of granola breakage during pipe pneumatic conveying’. Powder Technology. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cxcix

• Feeney, J., Fitzpatrick, J.J.; (2011) ‘[Particulate Science and Technology] Visualization of the caking behaviour between two particles’. 29:397–406. • Fitzpatrick, J., Cronin, K. and Byrne, E; (2011) ‘Is attending lectures still relevant in engineering education?’. European Journal of Engineering Education, 36 (3):301–312. • Pathare, P.B., Baé, N., Fitzpatrick, J.J., Cronin, K. and Byrne, E.P.; (2011) ‘Effect of high shear granulation process parameters on the production of granola cereal aggregates’. Biosystems Engineering, 110 (4):473–481.

Hao, Guangbo

Peer Reviewed Journals • Guangbo Hao, Xianwen Kong, Robert L. Reuben (2011) ‘ANonlinear Analysis of Spatial Compliant Parallel Modules: Multi-Beam Modules’. Mechanism and Machine Theory, 46 (5):680–706.

Conference Publications • Guangbo Hao, Xianwen Kong (2011) A Normalization-Based Approach to the Mobility Analysis of Spatial Compliant Multi-Beam Modules. 13th World Congress in Mechanism and Machine Science.

Thesis/Dissertation • Guangbo Hao (2011) Creative design and modelling of translational compliant parallel manipulators, PhD thesis. Thesis/Dissertation.

Hayes, John

Book Chapters • D. O’Sullivan, D. Murray, J. Hayes, M. G. Egan and A. W. Lewis; (2011) ‘The Beneﬁts of device level short term energy storage in ocean wave energy converters’ In: Rosario Carbone (Eds.). Energy Storage in the Emerging Era of Smart Grids. EU: InTech.

Peer Reviewed Journals • M. Rylko, B. Lyons, J.G. Hayes, M.G. Egan; (2011) ‘Revised magnetics performance factors and experimental comparison of high-ﬂux magnetic materials for high-current dc-dc inductors’. IEEE Transactions on Power Electronics, 26 (8):2112–2126.

Conference Publications • D.B. Murray, J.G. Hayes, M.G. Egan, D.L. O’Sullivan; (2011) Supercapacitor testing for power smoothing in a variable speed offshore wave energy converter. IEEE Applied Power Electronics Conference. • J.G. Hayes, R.P.R. De Oliveira, S. Vaughan, M.G. Egan; (2011) Simpliﬁed electric vehicle power train models and range estimation. IEEE Vehicular Power and Propulsion Conference. Return to President’s Report • J.G. Hayes, R.P.R. De Oliveira, S. Vaughan; (2011) Range estimation for the Nissan Leaf and Tesla Roadster using simpliﬁed powertrain models. Irish Transport Research Network. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cc

• K.J. Hartnett, J.G. Hayes, M.G. Egan, M. Rylko; (2011) A Comparison of a CCTT Split-Winding and EE Integrated Magnetics for High-Power DC-DC Converters. IEEE Vehicular Power and Propulsion. Conference. • K.J. Hartnett, J.G. Hayes, M.G. Egan, M. Rylko; (2011) Novel CCTT-core split-winding integrated magnetic for high-power dc-dc converter. IEEE Energy Conversion Conference and Exhibition.

Kelliher, Denis

Peer Reviewed Journals • Kelliher, D. and Campbell, J.S. (2011) ‘Shape design sensitivities improvement using convected unstructured meshes’. Optimization and Engineering.

Conference Publications • Murphy, C. and Kelliher, D. and Davenport, J. (2011) Modelling the Structural Deformations of Tracheal Cartilage during Deep Dives. In: Y. Tsompanakis and B.H.V. Topping eds. 2nd International Conference on Soft Computing Technology in Civil, Structural and Environmental Engineering Algarve, Portugal, 2011–07–03- 2011–07–06. • de Paor, C. and Gleeson, J. P. and Kelliher, D. and Cronin K. (2011) Effect of random geometric imperfections on buckling capacity of thin shells under uniform external pressure. 5th International Conference on Advanced Computational Engineering and Experimenting Seoul, South Korea, 2011–09–18- 2011–09–23.

Kennedy, Michael Peter

Books • K. Hosseini and M.P. Kennedy; (2011) Deterministic Techniques for Minimizing Spurious Tones in Digital Delta-Sigma Modulators. : Springer.

Peer Reviewed Journals • Daneshgar, S, De Feo, O, Kennedy, MP; (2011) ‘Observations Concerning the Locking Range in the Complementary Differential LC Injection-Locked Frequency Divider-Part II: Design Methodology’. Ieee Transactions On Circuits and Systems I-Regular Papers, 58. • Fitzgibbon, B, Kennedy, MP, Maloberti, F; (2011) ‘Hardware Reduction in Digital Delta-Sigma Modulators via Bus-Splitting and Error Masking-Part I: Constant Input’. Ieee Transactions On Circuits and Systems I-Regular Papers, 58. • Fitzgibbon, B, Kennedy, MP; (2011) ‘Calculation of Cycle Lengths in Higher-Order Error Feedback Modulators with Constant Inputs’. IEEE Transactions On Circuits and Systems II — Express Briefs, 58.

Conference Publications • Brandonisio, F, Kennedy, MP; (2011) First Order Noise Shaping in All Digital PLLs. ISCAS 2011 Rio de Janeiro, Brazil, 2011–05–15- 2011–05–18. Return to President’s Report • Fitzgibbon, B, Kennedy, MP; (2011) A Novel Implementation of Dithered Digital Delta-Sigma Modulators via Bus-Splitting. ISCAS 2011 Rio de Janeiro, Brazil, 2011–05–15- 2011–05–18. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cci

Leahy, Paul

• Peichl, M,Leahy, P,Kiely, G; (2011) ‘Six-year Stable Annual Uptake of Carbon Dioxide in Intensively Managed Humid Temperate Grassland’. Ecosystems, 14:112–126.

• Sibuet Watters, C. and Leahy, P.; (2011) Comparison of linear, Kalman ﬁlter and neural network downscaling of wind speeds from numerical weather prediction. 10th International Conference on Environment and Electrical Engineering (EEEIC). • Sibuet Watters, C. and Leahy, P.; (2011) Inﬂuence of wind direction in the downscaling of wind speeds from numerical weather prediction. Proceedings of the American Institute of Aeronautics and Astronautics Memphis.

Lightbody, Gordon

Peer Reviewed Journals • Andriy. Temko, Climent Nadeu, William Marnane, Geraldine Boylan, and Gordon Lightbody; (2011) ‘EEG Signal Description with Spectral-Envelope Based Speech Recognition Features for Detection of Neonatal Seizures’. IEEE Transactions on Information Technology in Biomedicine.

• Gregoricic, G. and Lightbody, G; (2011) ‘Gaussian Process Internal Model Control’. International Journal of Systems Science. • Temko, A; Thomas, E; Marnane, W; Lightbody, G; Boylan, G; (2011) ‘EEG-based neonatal seizure detection with Support Vector Machines’. Clinical Neurophysiology, 122 (3):464–473. • Temko, A; Thomas, E; Marnane, W; Lightbody, G; Boylan, G; (2011) ‘Performance assessment for EEG-based neonatal seizure detectors’. Clinical Neurophysiology, 122 (3):474–482. Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccii

Conference Publications • Andriy Temko, William Marnane, Geraldine Boylan, Gordon Lightbody; (2011) The Data-Driven Measure of EEG Channel Importance for Improved Patient-Adaptive Neonatal Seizure Detector. IFAC World Congress.

• Cretel, J.A.M., Lewis, A.W., Thomas, G.P. and Lightbody, G.; (2011) A Critical assessment of Latching Control for Wave-energy Point Absorbers. 21st International Offshore (Ocean) and Polar Engineering Conference & Exhibition, ISOPE Maui, Hawaii, USA. • Cretel, J.A.M., Lightbody, G., Thomas, G.P. and Lewis, A.W; (2011) Maximisation of Energy Capture by a Wave-Energy Point Absorber using Model Predictive Control. IFAC World Congress Milan, Italy. • Paul Mc Namara, Rudy R. Negenborn, Bart De Schutter, Gordon Lightbody; (2011) Coordination of a multiple link HVDC system using local communication based Distributed Model Predictive Control. IFAC World Congress. • Temko, A., Lightbody, G., Boylan, G. and Marnane, L.; (2011) Online EEG Channel Weighting for Detection of Seizures in the Neonate. IEEE, EMBS Boston, USA.

Marinkovic, Stevan

Peer Reviewed Journals • Marinkovic, SJ,Popovici, EM; (2011) ‘Nano-Power Wireless Wake-Up Receiver With Serial Peripheral Interface’. IEEE Journal on Selected Areas in Communications (JSAC), Guest Editorial, 29:1641–1647.

Conference Publications • A. Canu, M. Canu, S. Marinkovic, S. Faul, E. Popovici; (2011) Respiration Rate Calculation Using Low Power DSP Processor and SpO2 sensor. International Symposium on Medical Measurements and Applications, MEMEA. • E. Byrne, A. Manada, S. Marinkovic, E. Popovici; (2011) A Graph Theoretical Approach for Network Coding in Wireless Body Area Networks. Symposium on Information Theory (ISIT 2011).

• S. J. Marinkovic and E. M. Popovici; (2011) Nano-Power Wake-Up Radio Circuit for Wireless Body Area Networks. IEEE Topical Conference on Biomedical Wireless Technologies, Networks, and Sensing Systems, BioWireleSS.

• S. Marinkovic, E. Popovici; (2011) Power Efﬁcient Networking Using a Novel Wake-up Radio. The 5th International ICST Conference on Pervasive Computing Technologies for Healthcare.

Marnane, William

Book Chapters • Thomas, E.M., Temko, A., Lightbody, G., Marnane, W.P. and Boylan, G.B; (2011) ‘Advances in automated neonatal seizure detection’ In: Return to Editor-in-Chief: J. Kacprzyk, Edited by A. Ruano and A. Varkonyi-Koczy (Eds.). New Advances in Intelligent Signal Processing. Germany: President’s Report Springer-Verlag. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cciii

• English, T,Popovici, E,Keller, M,Marnane, WP; (2011) ‘Network-on-Chip interconnect for pairing-based cryptographic IP cores’. Journal of Systems Architecture, 57:95–108.

• Hanley, N,Tunstall, M,Marnane, WP; (2011) ‘Using templates to distinguish multiplications from squaring operations’. International Journal of Information Security, 10 (4):255–266. • Temko A., Thomas E.M., Marnane W.P., Lightbody G., Boylan, G. (2011) ‘Neonatal Seizure Detection with Support Vector Machines’. Clinical Neurophysiology, 122 (3):464–473. • Temko A., Thomas E.M., Marnane W.P., Lightbody G., Boylan, G. (2011) ‘Performance Assessment for Neonatal Seizure Detectors’. Clinical Neurophysiology.

• Kelleher D., Temko A., O’Regan S., Nash D., McNamara B., Costello D., Marnane W.P., (2011) Parallel Artefact Rejection for Epileptiform Activity Detection in Routine EEG 33rd Annual International IEEE EMBS Conference Boston, MA, USA, 2011–08–30- 2011–09–03. • Pan W., Marnane W.P., (2011) A Correlation Power Analysis attack against Tate pairing on FPGA. In: Andreas Koch, Ram Krishnamurthy, John McAllister, Roger Woods and Tarek El-Ghazawi eds. 7th International Symposium on Applied Reconﬁgurable Computing, Lecture Notes in Computer Science 6578 Belfast, Northern Ireland, 2011–03–23- 2011–03–25. • Temko A., Lightbody G., Boylan G., Marnane W.P., (2011) Online EEG Channel Weighting for Detection of Seizures in the Neonate. 33rd Annual International IEEE EMBS Conference Boston, MA, USA, 2011–08–30- 2011–09–03. • Temko A., Marnane W.P., Boylan G., Lightbody G., (2011) A Data-Driven Energy Based Estimator of EEG Channel Importance for Improved Patient-Adaptive Neonatal Seizure Detector. 18th IFAC World Congress Milan, Italy, 2011–08–28- 2011–09–02. • Twomey N., Temko A., O’B Hourihane J., Marnane W.P., (2011) Allergy detection with statistical modelling of HRV-based non-reaction baseline features. 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies (ISABEL 2011) Barcelona, Spain, Return to 2011–10–26- 2011–10–29. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science cciv

Morrison, Alan

Peer Reviewed Journals • Deng, S,Morrison, AP; (2011) ‘Integrable bias solution for avalanche photodiodes’. Electronic Letters, 47. • Gity, F,Hayes, JM,Corbett, B,Morrison, AP; (2011) ‘Modeling the Effects of Interface Traps on the Static and Dynamic Characteristics of Ge/Si Avalanche Photodiodes’. IEEE Journal of Quantum Electronics, 47:849–857.

• J. M. Hayes, F. Gity, B. Corbett and A. P. Morrison (2011) ‘Modeling the Effects of Interface Traps on Passive Quenching of a Ge/Si Geiger Mode Avalanche Photodiode’. Optical and Quantum Electronics.

Murphy, Jeremiah D.G.

• AS Nizami, A Singh, JD Murphy ; (2011) ‘Design, commissioning and start-up of a sequentially fed leach bed reactor complete with upﬂow anaerobic sludge blanket digesting grass silage’. Energy & Fuels, 25:823–834. • Abdul-Sattar Nizami, A Orozco, E. Groom, B. Diertrich, Jerry D. Murphy ; (2011) ‘How much gas can we get from grass?’. Applied Energy. • Asam, Z; Poulsen, TG; Nizami, AS; Raﬁque, R; Kiely, G; Murphy, JD; (2011) ‘How can we improve biomethane production per unit of feedstock in biogas plants?’. Applied Energy, 88:213–2018.

• Jerry D Murphy, T Thamsiriroj ; (2011) ‘What will power transport systems of the future?’. Materials Science Engineering. • Joseph McEniry, P O’Kiely, Paul Crossan, Elaine Groom, Jerry D Murphy ; (2011) ‘The effect of feedstock cost on biofuel cost as exemplified by biomethane production from grass silage’. Biofuels, Bioproducts, Biorefinery. • Nizami, AS,Molander, S,Asam, Z,Rafique, R,Korres, NE,Kiely, G,Murphy, JD; (2011) ‘Comparative analysis using EIA for developed and developing countries: case studies of hydroelectric power plants in Pakistan, Norway and Sweden’. International Journal of Sustainable Development and World Ecology, 18 (2):134–142. • Nizami, AS,Murphy, JD; (2011) ‘Optimizing the Operation of a Two-Phase Anaerobic Digestion System Digesting Grass Silage’. Environmental Science and Technology, 45:7561–7569.

• Singh, A,Nigam, PS,Murphy, JD; (2011) ‘Mechanism and challenges in commercialisation of algal biofuels’. Bioresource Technology, 102:26–34. Return to President’s Report • Singh, A,Nigam, PS,Murphy, JD; (2011) ‘Renewable fuels from algae: An answer to debatable land based fuels’. Bioresource Technology, 102:10–16. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccv

• Smyth, BM,Murphy, JD; (2011) ‘The indirect effects of biofuels and what to do about them: the case of grass biomethane and its impact on livestock’. Biofuels, Bioproducts, Bioreﬁnery, 5:165–184. • Smyth, BM,Smyth, H,Murphy, JD; (2011) ‘Determining the regional potential for a grass biomethane industry’. Applied Energy, 88:2037–2049. • T Thamsiriroj, JD Murphy ; (2011) ‘Acritical review of the applicability of biodiesel and grass biomethane as biofuels to satisfy both biofuel targets and sustainability criteria’. Applied Energy, 88:1008–1019. • Thamsiriroj, T,Murphy, JD; (2011) ‘Modelling mono-digestion of grass silage in a 2-stage CSTR anaerobic digester using ADM1’. Bioresource Technology, 102:948–959. • Thamsiriroj, T,Murphy, JD; (2011) ‘The impact of the life cycle analysis methodology on whether biodiesel produced from residues can meet the EU sustainability criteria for biofuel facilities constructed after 2017’. Renewable Energy, 36:50–63. • Thanasit Thamsiriroj, Henry Smyth, Jerry D Murphy; (2011) ‘Aroadmap for the introduction of gaseous transport fuel: A case study for renewable natural gas in Ireland’. Renewable and Sustainable Energy Reviews. O Gallachoir, Brian

Book Chapters • Dennehy, E.; Howley, M.; Ó Gallachóir, B.P.; (2011) ‘Energy in Ireland’ In: Energy Ireland Yearbook 2011. Dublin: bmf Business Services. Peer Reviewed Journals • Bazilian, B.; Nussbaumer, P.; Rogner, H.H.; Brew-Hammond, A.; Foster, V.; Pachauri, S.; Williams, E.; Howells, M.; Niyongabo, P.; Musaba, L.; Ó Gallachóir, B.P.; Radka, M.; Kammen, D.M.; (2011) ‘Energy access scenarios to 2030 for the power sector in sub-Saharan Africa’. Utilities Policy. • Cahill, C.; Ó Gallachóir B. P.; (2011) ‘Quantifying the savings of an industry energy efﬁciency programme’. Energy Efﬁciency. • Conroy, N.; Deane, J.P.; Ó Gallachóir, B.P. (2011) ‘Wind Turbine Availability Should it be time or energy based? A Case Study in Ireland’. Renewable Energy, 36 (11):2967–2971. • Daly, H.; Ó Gallachóir B.P. (2011) ‘Modelling Future Private Car Energy Demand in Ireland’. Energy Policy, 39 (12):7815–7824. • Daly, HE; Ó Gallachóir, BP; (2011) ‘Modelling Private Car Energy Demand Using a Technological Car Stock Model’. Transportation Research Part D-Transport And Environment, 16 (2):93–101. • Dineen, D; Ó Gallachóir, BP; (2011) ‘Modelling the Impacts of Building Regulations and a Property Bubble on Residential Space and Water Heating’. Energy and Buildings, 43 (1):166–178. • Rogan, F.; Cahill, C.J.; Ó Gallachóir, B.P.; (2011) ‘Decomposition Analysis of Gas Consumption in the Residential Sector in Ireland’. Energy Policy. • Rogan, F; Dennehy, E; Daly, H; Howley, M; Ó Gallachóir, BP; (2011) ‘Impacts of an Emission Based Private Car Taxation Policy — One Year Ex-Post Analysis’. Transportation Research Part A Policy and Practice, 45 (7):583–597. Return to President’s Report • Rout, U.K.; Voss, A.; Singh, A.; Blesl, M.; Fahl, U.; Ó Gallachóir, B.P. (2011) ‘Energy and emissions forecast for China over a long-time horizon’. Energy, 36 (1):1–11. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccvi

Conference Publications • Chiodi, A.; Deane, J.P.; Gargiulo, M.; Ó Gallachóir B. P.; (2011) Modelling Electricity Generation — Comparing Results From a Power Systems Model and an Energy Systems model. International Energy Workshop 2011 Stanford University, Stanford, CA, 2011–06–06- 2011–06–09. • Daly, H.; Ó Gallachóir, B.P.; (2011) Modelling future private car energy demand using two techno-economic approaches eceee 2011. Energy efficiency first: The foundation of a low-carbon society Belambra Presqu’île de Giens, France, 2011–06–06- 2011–06–11. • Deane, J.P.; Dalton, G.; Ó Gallachóir B. P.; (2011) Analysis of 500MW of Wave Energy on the All Ireland Market. Second Workshop on Economics of Ocean and Marine Renewable Energy University College Cork, 2011–06–13- 2011–06–13. • Dineen, D.; Rogan, F.; Cronin, W.; Ó Gallachóir B. P.; (2011) Modelling residential energy savings due to Ireland’s National Retrofit Programme using DEAP and LEAP International Energy Workshop 2011 2011–06–06- 2011–06–09. • Rogan, F.; Ó Gallachóir, B.P.; (2011) Ex-Post Evaluation of a Residential Energy Efficiency Policy Measure Using Empirical Data eceee 2011 Energy efficiency first: The foundation of a low-carbon society Belambra Presqu’île de Giens, France, 2011–06–06- 2011–06–11. • Ó Gallachóir, B. P.; Chiodi, A.; Gargiulo, M.; (2011) Long Term Energy Scenarios for Ireland — the role of ocean energy. Second Workshop on Economics of Ocean and Marine Renewable Energy University College Cork, 2011–06–13- 2011–06–13.

Published Reports • Deane, J.P.; Walsh, D.; FitzGerald, J.; Ó Gallachóir, B.P.; (2011) Comparing Electricity Modelling for Energy Forecasts: PLEXOS and IDEM. Sustainable Energy Authority of Ireland. • Dennehy, E.; Howley, M.; Ó Gallachóir, B.P.; (2011) Energy Security in Ireland: A Statistical Overview. Sustainable energy Authority of Ireland. • Howley, M.; Dennehy, E.; Holland, M.; Ó Gallachóir, B.P. (2011) Energy in Ireland 1990 — 2010. Sustainable Energy Authority of Ireland.

O’Sullivan, Dara

Peer Reviewed Journals • Dara O’Sullivan, James Grifﬁths, Michael G. Egan and Anthony W. Lewis; (2011) ‘Development of an electrical power take off system for a sea-test scaled offshore wave energy device’. Renewable Energy, 36 (4):1236–1244. • O’Sullivan, D. L.; Lewis, A., ; (2011) ‘Generator Selection and Comparative Performance in Offshore Oscillating Water Column Ocean Wave Energy Converters’. IEEE Transactions on Energy Conversion.

O’Sullivan, Dominic

Conference Publications • Brendan Walsh, Dominic O’ Sullivan (2011) The Application of Phase Change Materials to Evaporative Cooling for Thermal Energy Storage in Return to Ireland. Sustainable Development 2011 Dublin. President’s Report • Sean Murray, Dominic O’ Sullivan (2011) The Carbon Neutral Building Project. Sustainable Development 2011. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccvii

Oliveira, Jorge

Peer Reviewed Journals • Mahajan, P. V., Sousa-Gallagher, M.J., Patel, H.A., Yuan, B., Oliveira, J.C.; (2011) ‘Application of PACK-in-MAP software for MAP design’. Acta Horticulturae, (Special Issue (CAMA)). • Mahajan, P. V., Sousa-Gallagher, M.J., Yuan, B., Patel, H.A., Oliveira, J.C. ; (2011) ‘Development of web-based software for MAP design’. Acta Horticulturae, (Special Issue (CAMA)). • Patel, H.A., Mahajan, P. V., Oliveira, J.C. and Sousa-Gallagher, M.J. ; (2011) ‘Impact of product and package variability on modiﬁed atmosphere packaging’. Acta Horticulturae, (Special Issue (CAMA)). Pakrashi, Vikram

Peer Reviewed Journals • Arrigan, J; Pakrashi, V; Basu, B; Nagarajaiyah, S; (2011) ‘Control of Flapwise Vibrations in Wind Turbine Blades using Semiactive Tuned Mass Dampers’. Structural Control and Health Monitoring, 18 (8):840–851. • Ghosh B, Pakrasahi V and Schoefs F; (2011) ‘High Dynamic Range Image Processing for Non-Destructive-Testing’. European Journal of Environmental and Civil Engineering, 15 (7):1085–1096. • Znidaric, A; Pakrashi, V; O’Connor, A; O’Brien, E; (2011) ‘AReview of Road Structure data in Six European Countries’. Proccedings of The Ice:Journal of Urban Design and Planning, 164 (4):225–232. Conference Publications • Jaksic V; Pakrashi V; O’Connor A; (2011) Employing Surface Roughness for Bridge-Vehicle Interaction based Damage Detection. ASME 2011 International Mechanical Engineering Congress and Exposition (IMECE 2011). • Lawson RA, Pakrashi V, Ghosh B and O’Brien L; (2011) Perception of Safety Among Cyclists in Dublin City. Irish Transportation Research Network Conference. • M.E Rahman, B.H Nagaratnam, V. Pakrashi, N. Chai, A.S. Muntohar, A. Faheem, S. Debnath and M.A Mannan; (2011) A Preliminary Study on Self Compacting Concrete using Locally Available Waste Materials 3rd CUTSE International Conference, Curtin University Sarawak, Malaysia. • Maurice Gavin, Bidisha Ghosh, Vikram Pakrashi, John Barton, Brendan O’Flynn, Anneka Lawson; (2011) A Cycle Route Planner Mobile-App for Dublin City. Irish Transportation Research Network Conference. • O’Connor A; Pakrashi V; (2011) Recent Advances in Reliability based Assessment of Highway Bridges. 11th International Conference on Applications of Statistics and Probability in Civil Engineering. • O’Byrne M, Pakrashi V, Ghosh B and Schoefs F; (2011) Receiver Operating Characteristics of a Modiﬁed Edge Detection for Corrosion Classiﬁcation. Forum Bauinformatik 23rd European Conference, Ireland. Return to President’s Report • Pakrashi V, Kelly J and Ghosh B (2011) Sustainable Prioritisation of Bridge Rehabilitation Comparing Road User Cost. Transportation Research Board Annnual Meeting 2011. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccviii

Popovici, Emanuel

Peer Reviewed Journals • English, T,Popovici, E,Keller, M,Marnane, WP; (2011) ‘Network-on-Chip interconnect for pairing-based cryptographic IP cores’. Journal of Systems Architecture, 57:95–108. • Marinkovic, SJ,Popovici, EM; (2011) ‘Nano-Power Wireless Wake-Up Receiver With Serial Peripheral Interface’. IEEE Journal on Selected Areas in Communications (JSAC), Guest Editorial, 29:1641–1647.

Wright, William

Book Chapters • Wright, WMD (2011) ‘Analytical methods: Ultrasonic techniques’ In: J. W. Fuquay, P.F. Fox and P. L. H. McSweeney (Eds.). Encyclopedia of Dairy Sciences. Oxford: Elsevier.

Conference Publications • Jesudoss, P; Mathewson, A; Wright, WMD; Twomey, K; Stam, F; (2011) A swallowable diagnostic capsule with a direct access sensor using anisotropic conductive adhesive. IEEE International Reliability Physics Symposium (IRPS 2011) Monterey, CA, 2011–04–20- 2011–04–14. • McSweeney, SG; Wright, WMD; (2011) HfO2 High-k Dielectric Layers in Air-Coupled Capacitive Ultrasonic Transducers. 2011 IEEE International Ultrasonics Symposium (IUS 2011) Orlando, FL, 2011–10–18- 2011–10–21. School of Food and Nutritional Sciences

Cashman, Kevin

Flynn, Albert

Book Chapters • Flynn, A.; (2011) ‘Galactosemia’ In: Encyclopedia of Dairy Sciences. San Diego: Academic Press.

Peer Reviewed Journals • Flynn, A.; (2011) ‘Scientiﬁc substantiation of health claims in the EU’.Proceedings of the Nutrition Society, 70:1–7. Return to President’s Report • L.J. Black, J. Ireland, A. Mller, M. Roe, J. Walton, A. Flynn, P.M. Finglas, M. Kiely; (2011) ‘Development of an on-line Irish food composition database for nutrients’. Journal of Food Composition and Analysis. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccix

• McKenna G, Allen PF, O’Mahony D, Flynn A, DaMata C, Cronin M, Woods N; (2011) ‘Impact of tooth replacement strategies on the nutritional status of partially dentate elders’. Gerodontology. • O’Sullivan, A,Gibney, MJ,Connor, AO,Mion, B,Kaluskar, S,Cashman, KD,Flynn, A,Shanahan, F,Brennan, L; (2011) ‘Biochemical and metabolomic phenotyping in the identiﬁcation of a vitamin D responsive metabotype for markers of the metabolic syndrome’. Molecular Nutrition and Food Research, 55:679–690. • Tlustos, C., Sheridan, M., O’Sullivan, D., Anderson, W., Flynn, A. ; (2011) ‘The dioxin contamination incident in Ireland, 2008: analytical results and congener patterns’. Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Amp; Risk Assessment, 28:1–11.

Conference Publications • McKenna G, Allen PF, Flynn A, O’Mahony D, Cronin M, Woods N; (2011) Comparison of tooth replacement strategies on the nutritional status of older patients: A randomised controlled clinical trial. 7th Congress of the EUGMS.

Kelly, Alan

Book Chapters • Kelly, A.L., Keitner, G. and Merin, U. (2011) ‘Milk quality and udder health: test methods and standards’ In: J.W. Fuquay, P.F. Fox and P.L.H. McSweeney (Eds.). Encyclopeida of Dairy Science. London: Academic Press. • Kelly, A.L., and O’Shea, N. (2011) ‘Plant and equipment: pasteurisers’ In: J.W. Fuquay, P.F. Fos and P.L.H. McSweeney (Eds.). Encyclopedia of Dairy Science. London: Academic Press.

Peer Reviewed Journals • Ciron, CIE,Gee, VL,Kelly, AL,Auty, MAE; (2011) ‘Effect of microfluidization of heat-treated milk on rheology and sensory properties of reduced fat yoghurt’. Food Hydrocolloids, 25:1470–1476. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Arole for proline synthesis and transport in Listeria monocytogenes barotolerance’. Journal of Applied Microbiology, 110:1187–1194. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Novel listerial genetic loci conferring enhanced barotolerance in Escherichia coli’. Journal of Applied Microbiology, 110:618–630. • Heffernan, S.P., Kelly, A.L., Mulvihill, D.M., Lambrich, U. and Schuchman, H.P. (2011) ‘Efficiency of a range of homogenisation technologies in the emulsification and stabilization of cream liquers’. Innovative Food Science & Emerging Technologies. • Huppertz, T,Smiddy, MA,Goff, HD,Kelly, AL; (2011) ‘Effects of high pressure treatment of mix on ice cream manufacture’. International Dairy Journal, 21:718–726. • Tobin, JT,Fitzsimons, SM,Kelly, AL,Fenelon, MA; (2011) ‘The effect of native and modified konjac on the physical attributes of pasteurized and UHT-treated skim milk’. International Dairy Journal, 21:790–797. Return to President’s Report • Voigt, DD,Patterson, MF,Linton, M,Kelly, AL; (2011) ‘Effect of high-pressure treatment of milk prior to manufacture on ripening of Camembert cheese’. Innovative Food Science & Emerging Technologies, 12:1–5. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccx

Kiely, Mairead

Peer Reviewed Journals • Barnes, MS,Horigan, G,Cashman, KD,Hill, TR,Forsythe, LK,Lucey, AJ,McSorley, EM,Kiely, M,Bonham, MP,Magee, PJ,Strain, JJ,Wallace, JMW; (2011) ‘Maintenance of Wintertime Vitamin D Status with Cholecalciferol Supplementation Is Not Associated with Alterations in Serum Cytokine Concentrations among Apparently Healthy Younger or Older Adults’. Journal of Nutrition, 141:476–481.

• Hawkes CP, Hourihane JO, Kenny LC, Irvine AD, Kiely M, Murray DM; (2011) ‘Gender- and Gestational Age-Speciﬁc Body Fat Percentage at Birth’. Pediatrics. • L.J. Black, J. Ireland, A. Mller, M. Roe, J. Walton, A. Flynn, P.M. Finglas, M. Kiely; (2011) ‘Development of an on-line Irish food composition database for nutrients’. Journal of Food Composition and Analysis. • Lanham-New SA, Buttriss JL, Miles LM, Ashwell M, Berry JL, Boucher BJ, Cashman KD, Cooper C, Darling AL, Francis RM, Fraser WD, de Groot CP, Hyppönen E, Kiely M, Lamberg-Allardt C, Macdonald HM, Martineau AR, Masud T, Mavroeidi A, Nowson C,Prentice A, Stone EM, Reddy S, Vieth R, Williams CM. ; (2011) ‘Proceedings of the Rank Forum on Vitamin D’.British Journal of Nutrition, 105 (1):144–156. • Muldowney, S,Lucey, AJ,Paschos, G,Martinez, JA,Bandarra, N,Thorsdottir, I,Cashman, KD,Kiely, M; (2011) ‘Relationships between Vitamin D Status and Cardio-Metabolic Risk Factors in Young European Adults’. Annals of Nutrition and Metabolism, 58:85–93.

Mcsweeney, Paul

Edited Books • Fuquay, J., P.F. Fox and P.L.H. McSweeney (Ed.). (2011) Encyclopedia of Dairy Sciences, 4 vols., 2nd ed, London: Elsevier.

Mulvihill, Daniel

Book Chapters • Jonathan O‘Regan, and Daniel M Mulvihill ; (2011) ‘Milk Proteins: Caseins and Caseinates, Industrial Production and Compositional Standards’ In: P. L. H. McSweeney and P. F. Fox (Eds.). Encyclopaedia of Dairy Science, 3rd Edition. London: Elsevier Publishers.

Peer Reviewed Journals • Aniket R. Abhyankar, Daniel M. Mulvihill, and Mark A. E. Auty ; (2011) ‘Combined microscopic and dynamic rheological methods for studying the structural breakdown properties of whey protein gels and emulsion ﬁlled gels’. Food Hydrocolloids, 25:275–282.

• Aniket R. Abhyankar, Valérie Chaurin, Daniel. M. Mulvihill and Mark. A.E. Auty (2011) ‘Techniques for localization of konjac glucomannan in model milk protein-polysaccharide systems: Physico-chemical and microscopic investigations’. Food Chemistry, 129:1362–1368.

• Sinead P. Heffernan, Alan L. Kelly, Daniel M.Mulvihill, Uwe Lambrich and Heike P. Schuchmann (2011) ‘Efﬁciency of a range of homogenisation Return to President’s Report technology in the emulsiﬁcation and stabilization of cream liqueurs’. Innovative Food Science & Emerging Technologies, 12:628–634. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccxi

O’Brien, Nora

Peer Reviewed Journals • Lahart, N,O’Callaghan, Y,Aherne, SA,O’Sullivan, D,FitzGerald, RJ,O’Brien, NM; (2011) ‘Extent of hydrolysis effects on casein hydrolysate bioactivity: Evaluation using the human Jurkat T cell line’. Rna-A Publication of The Rna Society, 21:777–782. • Lahart, Natasha and O’Callaghan, Yvonne and Aherne, S. Aisling and O’Sullivan, Dara and FitzGerald, Richard J. and O’Brien, Nora M. (2011) ‘Extent of hydrolysis effects on casein hydrolysate bioactivity: Evaluation using the human Jurkat T cell line’. International Dairy Journal, 21 (10):777–782. • Milner, Sinead Eileen and Brunton, Nigel Patrick and Jones, Peter Wyn and O’Brien, Nora Mary and Collins, Stuart Gerard and Maguire, Anita Rose (2011) ‘Bioactivities of Glycoalkaloids and Their Aglycones from Solanum Species’. Journal of Agricultural and Food Chemistry, 59 (8):3454–3484. • O’Sullivan, A. M. and O’Callaghan, Y. C. and O’Grady, M. N. and Queguineur, B. and Hanniffy, D. and Troy, D. J. and Kerry, J. P. and O’Brien, N. M. (2011) ‘In vitro and cellular antioxidant activities of seaweed extracts prepared from ﬁve brown seaweeds harvested in spring from the west coast of Ireland’. Food Chemistry, 126 (3):1064–1070.

O’Mahony, Seamus Anthony

Book Chapters • O’Mahony, J.A., Ramanujam, K.S., Burgher, A.M. and O’Callaghan, D.M.; (2011) ‘Infant Formula — New Developments’ In: Fuquay, J.W., Fox, P.F. and McSweeney, P.L.H (Eds.). Encyclopedia of Dairy Sciences. Encyclopedia of Dairy Sciences: Elsevier, Oxford.

O’Neill, Eileen

Peer Reviewed Journals • Di Bernardini, R, Rai, D.K., Bolton, D., Kerry, J., O’Neill, E., Mullen, A., Harnedy, P., Hayes, M (2011) ‘Isolation, puriﬁcation and characterization of antioxidant peptidic fractions from a bovine liver sarcoplasmic protein thermolysin hydrolyzate’. Peptides, 32:388–400. • Di Bernardini, R., Harnedy, P. Bolton, D., Kerry, J., O’Neill, E. , Mullen, A.M. and Hayes, M. (2011) ‘Review:Antioxidant and antimicrobial peptidic hydrolysates from muscle protein sources and by-products’. Food Chemistry, 124:1296–1309.

O’Sullivan, Maurice

Book Chapters • O’Sullivan, M. G., Kerry, J. P. and Byrne, D. V. ; (2011) ‘Use of sensory science as a practical commercial tool in the development of consumer-led processed meat products’ In: Processed Meats Improving Safety and Nutritional Quality. UK: Woodhead Publishing Ltd. • O’Sullivan, M.G & Kerry, J.P. ; (2011) ‘Sensory Quality of Fresh and Processed Meats’ In: J. P. Kerry and D. A. Ledward (Eds.). mproving the sensory and nutritional quality of fresh and processed meats. Cambridge, UK: Woodhead Publishing Limited. Return to President’s Report • O’Sullivan, M.G.; (2011) ‘Case Studies: Meat and poultry’ In: David Kilcast, and Persis Subramaniam (Eds.). Food and beverage shelf-life and stability. Cambridge, UK: Woodhead Publishing Limited. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccxii

• Yusop, S, M., O’Sullivan, M. G., Kerry, J. F. and J. P. Kerry ; (2011) ‘Meat Marinating Technologies’ In: J. P. Kerry and D. A. Ledward (Eds.). Improving the sensory and nutritional quality of fresh and processed meats. Cambridge, UK: Woodhead Publishing Limited.

Peer Reviewed Journals • O’Sullivan, M.G., Cruz, M. and Kerry, J.P. ; (2011) ‘Evaluation of carbon dioxide flavour taint in modified atmosphere packed beef steaks’. LWT — Food Science and Technology. • Zakrys-Walliwander, P. I., O’Sullivan, M. G., Walshe, H., Allen, P., Kerry, J. P. ; (2011) ‘Sensory comparison of commercial low and high oxygen modified atmosphere packed sirloin beef steaks’. Meat Science, 88:198–202.

Other Journals • O’Sullivan, M. G., Byrne, D. V., O’Sullivan, M.P. and Kerry, J.P. ; (2011) ‘The ‘Sense-Award’ scoring system: Objective adjudication for a multi category food awards competition’ New Food.

Roos, Yrjo

Peer Reviewed Journals • Buera, M.P., Roos, Y.H., Levine, H., Slade, L., Corti, H.R., Auffret, T. and Angell, C.A. (2011) ‘State diagrams for improving processing and storage of foods, biological materials and pharmaceuticals’. Pure and Applied Chemistry, 83 (8):1567–1617. • Cornacchia, L,Roos, YH; (2011) ‘Lipid and water crystallization in protein-stabilised oil-in-water emulsions’. Food Hydrocolloids, 25:1726–1736. • Cornacchia, L,Roos, YH; (2011) ‘Solid-Liquid Transitions and Stability of HPKO-in-Water Systems Emulsiﬁed by Dairy Proteins’. Food Biophysics, 6:288–294. • Cornacchia, L. and Roos, Y.H (2011) ‘State of dispersed lipid carrier and interphase composition as determinants of beta-carotene stability in oil-in-water emulsions’. Journal of Food Science, 76 (8):C1211-C1218. • Cornacchia, L. and Roos, Y.H. (2011) ‘Stability of beta-carotene in protein-stabilized oil-in-water delivery systems’. Journal of agricultural and food chemistry, 59 (13):7013–7020. • Maher, P.G., Fenelon, M.A., Zhou, Y., Haque, Md.K. and Roos, Y.H. (2011) ‘Optimization of β-casein stabilized nanoemulsions using experimental mixture design’. Journal of Food Science, 76 (8):C1108-C1117. • Ronda, F,Caballero, PA,Quilez, J,Roos, YH; (2011) ‘Staling of frozen partly and fully baked breads. Study of the combined effect of amylopectin recrystallization and water content on bread ﬁrmness’. Journal of Cereal Science, 53:97–103. • Ronda, F,Roos, YH; (2011) ‘Staling of fresh and frozen gluten-free bread’. Journal of Cereal Science, 53:340–346. • Silalai, N. and Roos, Y.H. (2011) ‘Coupling of dielectric and mechanical relaxations with glass transition and stickiness of milk solids’. Journal of Food Engineering, 104 (3):445–454. Return to President’s Report • Silalai, N. and Roos, Y.H. (2011) ‘Mechanical α-relaxations and stickiness of maltodextrin-milk solids systems around glass transition’. Journal of the Science of Food and Agriculture, 91:2529–2536. UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccxiii

• Silalai, S. and Roos, Y.H. (2011) ‘Mechanical relaxation times as indicators of stickiness in skim milk-maltodextrin solids systems’. Journal of Food Engineering, 106 (4):306–317. • Zhou, Y. and Roos, Y.H. (2011) ‘Characterization of carbohydrate-protein matrices for nutrient delivery’. Journal of Food Science, 76:E368-E376.

Ryan, Aoife

Peer Reviewed Journals • A Ryan, M Duong, L Helay, S Ryan, JV Reynolds, DG Power; (2011) ‘Obesity, metabolic syndrome and esophageal adenocarcinoma: Epidemiology, etiology and new targets’. 35:309–319.

• CL Donoghue, A Ryan, JV Reynolds; (2011) ‘Cancer cachexia: mechanisms and clinical implications’.

Sheehy, Tony

Peer Reviewed Journals • Sharma, S., Barr, A.B., Macdonald, H.M., Corriveau, A., Sheehy, T., Novotny, R.; (2011) ‘Vitamin D deﬁciency and disease risk among Aboriginal Arctic populations’. Nutrition Reviews. • Sheehy T., Sharma S.; (2011) ‘The nutrition transition in the Republic of Ireland: trends in energy and nutrient supply from 1961 to 2007 using Food and Agriculture Organisation food balance sheets’. British Journal of Nutrition, (Epub Apr 12). • Sheehy, T; Sharma, S; (2011) ‘The nutrition transition in Trinidad and Tobago: trends in energy and nutrient supply from 1961 to 2007’. British Journal of Nutrition.

School of Mathematical Sciences

Amann, Andreas

Peer Reviewed Journals • Gutiérrez, R., Amann, A., Assenza, S. , Gómez-Gardeñes, J. , Latora, V. , Boccaletti, S. (2011) ‘Emerging Meso- and Macroscales from Synchronization of Adaptive Networks’. Physical Review Letters, 107.

• Heinricht, P., Wetzel, B., O’Brien, S., Amann, A., Osborne, S.; (2011) ‘Bistability in an injection locked two color laser with dual injection’. Applied Physics Letters, 99.

• Khalil, H., Sun, Y., Balkan, N., Amann, A., Sopanen, M.; (2011) ‘Nonlinear Dynamics of non-equilibrium holes in p-type modulation doped GaInNAs/GaAs quantum wells’. Nanoscale Research Letters, 6. Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccxiv

Carroll, Thomas

Peer Reviewed Journals • Rodrigo Banuelos and Tom Carroll; (2011) ‘The maximal expected lifetime of Brownian motion’. Mathematical Proceedings of the Royal Irish Academy, 111A (1):1–11. • Tom Carroll and Jesse Ratzkin; (2011) ‘Interpolating between torsional rigidity and principal frequency’. Journal of Mathematical Analysis and Applications, 379 (2):818–826.

Kilian, Martin

Peer Reviewed Journals • M Kilian; (2011) ‘Bubbletons are not embedded’. Osaka Jnl. Mathematics.

Mckay, Ben

Peer Reviewed Journals • Benjamin McKay and Alexey Pokrovskiy; (2011) ‘Locally homogeneous geometric structures on Hopf surfaces’. Indiana University Mathematics Journal.

• Benjamin McKay; (2011) ‘Characteristic forms of complex Cartan geometries’. Advances In Geometry, 11 (1):138–168. • Benjamin McKay; (2011) ‘Holomorphic Cartan geometries on uniruled surfaces’. Comptes Rendus Math. Académie des Sciences Paris, 349 (1):893–896. • Benjamin McKay; (2011) ‘Rigid geometry on projective varieties’. Mathematische Zeitschrift.

• McKay, B.; (2011) ‘Holomorphic Parabolic Geometries and Calabi-Yau Manifolds’. Symmetry Integrability and Geometry-Methods and Applications, 7 (090):1–11.

Mortell, Michael

Other Journals • Brian R. Seymour, Michael P. Mortell, David E. Amundsen; (2011) ‘Resonant oscillations of an inhomogeneous gas between concentric spheres’ Proc. Roy. Soc A. • Michael P. Mortell and Brian R. Seymour; (2011) ‘The propagation of small amplitude nonlinear waves in a strongly inhomogeneous medium’ Mathematics and mechanics of solids. Return to President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccxv

Mustata, Anca

Peer Reviewed Journals • Finbarr Holland, Anca Mustata (2011) ‘AHilbert space analogue of Heron’s reﬂection principle’. Bulletin of the Irish Mathematical Society.

O’Sullivan, Finbarr

Conference Publications • Eary JF, O’Sullivan F, Roy S, Vernon C; (2011) Measurement of Heterogeneity in the Glucose Utilisation of Human Sarcomas Based on 3-D FDG PET. Data Society of Nuclear Medicine, 2011–06–01- 2011–06–04.

Rachinskii, Dmitrii

Book Chapters • Vladimirov, A; Rachinskii, D; Wolfrum, M (2011) ‘Modeling of passively mode-locked semiconductor lasers’ In: Nonlinear Laser Dynamics: From Quantum Dots to Cryptography. Berlin: Wiley-VCH.

Peer Reviewed Journals • Amann, A; Brokate, M; Rachinskii, D; Temnov, G (2011) ‘Distribution of return point memory states for systems with stochastic inputs’. Journal of Physics: Conference Series, 268 (1). • Balanov, Z; Krawcewicz, W; Rachinskii, D (2011) ‘On the equivariant Hopf bifurcation in hysteretic networks of van der Pol oscillators’. Journal of Physics: Conference Series, 268 (1). • Brokate, M; McCarthy, S; Pimenov, A; Pokrovskii, A; Rachinskii, D (2011) ‘Energy dissipation in hydrological systems due to hysteresis’. Environmental Modeling & Assessment, 16 (4):313–333.

• Krejci, P; O’Kane, P; Pokrovskii, A; Rachinskii, D (2011) ‘Stability results for a soil model with singular hysteretic hydrology’. Journal of Physics: Conference Series, 268 (1).

• McCarthy, S; Rachinskii, D (2011) ‘Attempts at a numerical realisation of stochastic differential equations containing Preisach operator’. Journal of Physics: Conference Series, 268 (1). • Pokrovskii, A; Rachinskii, D; Sobolev, V; Zhezherun, A (2011) ‘Topological degree in analysis of canard-type trajectories in 3-D systems’. Applicable Analysis, 90 (7):1123–1139. • Vladimirov, A; Grechishkina, N; Kozyakin, V; Kuznetsov, N; Pokrovskii, A; D. Rachinskii, D (2011) ‘Asynchronous systems: theory and practice’. Information Systems, 11 (1):1–45. Return to • Vladimirov, A; Rachinskii, D; Rebrova, N; Huyet, G (2011) ‘Anoptically injected mode locked laser’. Physics Review A, 88. President’s Report UCC Research Publications 2011–2012 | College of Science, Engineering, and Food Science ccxvi

Seda, Anthony

Edited Books • T. Neary, A.K. Seda and D. Woods (Ed.). (2011) Proceedings of CSP’08 (Selected Papers), NUI, Cork, December, 2008, The Netherlands: Elsevier Science Publishers.

Stynes, Martin

Peer Reviewed Journals • Clavero, C.,Gracia, J.L., Stynes, M.; (2011) ‘Asimpler analysis of a hybrid numerical method for time-dependent convection-diffusion problems’. Journal of Computational and Applied Mathematics, 235 (17):5240–5248. • Franz, S.; Kellogg, R.B.; Stynes, M. (2011) ‘Galerkin and streamline diffusion ﬁnite element methods on a Shishkin mesh for a convection-diffusion problem with corner singularities’. Mathematics of Computation. • Kopteva, N; Stynes, M (2011) ‘Approximation of interior-layer solutions in a singularly perturbed semilinear reaction-diffusion problem’. Numerische Mathematik, 119 (4):787–810.

• Liu, F; Stynes, M; Zhou, A; (2011) ‘Improved accuracy of two-scale ﬁnite element discretizations by postprocessing, Part I’.SIAM Journal on Numerical Analysis, 49 (5):1947–1971.

• Shishkin, G., Shishkina, L.P., Cronin, K., Stynes, M., Viscor, M.; (2011) ‘Anumerical method for a Stefan-type problem’. Mathematical Modelling and Analysis, 16 (1):119–142.

Conference Publications • Franz, S.; Kellogg, R.B.; Stynes, M. (2011) On the choice of mesh for a singularly perturbed problem with a corner singularity. In: Clavero, C.; Gracia, J.L.; Lisbona, F eds. BAIL 2010 – Boundary and Interior Layers, Computational and Asymptotic Methods.

• Viscor, M.; Stynes, M. (2011) Fundamental properties of the solution of a singularly perturbed degenerate parabolic problem. In: Clavero, C.; Gracia, J.L.; Lisbona, F eds. BAIL 2010 – Boundary and Interior Layers, Computational and Asymptotic Methods. • Viscor, M.; Stynes, M. (2011) Numerical method for a Stefan-type problem with interior layers. ECMI 2010 (16th European Conference on Mathematics for Industry).

Tony Fitzgerald

• Harrington, J.,Fitzgerald, A. P.,Layte, R.,Lutomski, J.,Molcho, M.,Perry, I. J.; (2011) ‘Sociodemographic, health and lifestyle predictors of poor diets’. Public Health Nutrition, 14 (12):2166–2175. • Kulcsár, Zsuzsanna, Lövquist, Erik, Fitzgerald, Anthony P., Aboulaﬁa, Annette, Shorten, George D.; (2011) ‘Testing Haptic Sensations for Spinal Anesthesia’. Regional Anesthesia and Pain Medicine, 1. • Savage E, Beirne PV, Ni Chroinin M, Duff A, Fitzgerald AP ; (2011) ‘Self-management education for cystic ﬁbrosis’. Cochrane Database of Systematic Reviews, (1).

Return to President’s Report UCC Research Publications 2011–2012 | Librarian and Director Information Service ccxviii

Librarian and Director Information Service

Mcmahon, Seamus

Peer Reviewed Journals • Fallon, Helen; Maxwell, Jane; McCaffrey, Ciara; McMahon, Seamus; (2011) ‘Engaging with leadership development in Irish academic libraries: some reﬂections of the Future Leaders Programme (FLP)’.Australian Library Journal, 60 (1):8–20.

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxix

Research Centres and Institutes

Alimentary Pharmabiotic Centre

Cashman, Kevin

Clarke, David

Cryan, John F

• Bravo, JA,Forsythe, P,Chew, MV,Escaravage, E,Savignac, HM,Dinan, TG,Bienenstock, J,Cryan, JF; (2011) ‘Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve’. Proceedings of The National Academy of Science Usa, 108:16050–16055. • Browne CA, Clarke G, Dinan TG, Cryan JF; (2011) ‘Differential stress-induced alterations in tryptophan hydroxylase activity and serotonin turnover in two inbred mouse strains’. Neuropharmacology, 60 (4):683–691.

• Cryan JF, O’Mahony SM; (2011) ‘The microbiome-gut-brain axis: from bowel to behavior’. Neurogastroenterology and Motility, 23 (3):187–192. • Finger BC, Schellekens H, Dinan TG, Cryan JF; (2011) ‘Is there altered sensitivity to ghrelin-receptor ligands in leptin-deﬁcient mice?: importance of satiety state and time of day’. Psychopharmacology. Return to President’s Report • Finger, BC,Dinan, TG,Cryan, JF (2011) ‘High-Fat Diet Selectively Protects Against The Effects Of Chronic Social Stress In The Mouse’. Neuroscience, 192:351–360. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxx

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxi

Dinan, Ted

• Claesson, M. J.,Cusack, S.,O’Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, A.P.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O’Connor, M.,Harnedy, N.,O’Connor, K.,Henry, C.,O’Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O’Toole, P. W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings of The National Acadamy of Sciences, 108 Suppl 1:4586–914586. • Dinan TG, Quigley EM (2011) ‘Probiotics in the treatment of depression: science or science fiction?’. The Australian and New Zealand Journal of Psychiatry, 45 (12):1023–1025. • Finger BC, Dinan TG, Cryan JF (2011) ‘Behavioral satiety sequence in a genetic mouse model of obesity: effects of ghrelin receptor ligands’. Behavioural Pharmacology, 22 (7):624–632. • Finger, BC,Dinan, TG,Cryan, JF (2011) ‘High-Fat Diet Selectively Protects Against The Effects Of Chronic Social Stress In The Mouse’. Neuroscience, 192:351–360. • Finger, BC,Dinan, TG,Cryan, JF; (2011) ‘Behavioral satiety sequence in a genetic mouse model of obesity: effects of ghrelin receptor ligands’. Behavioural Pharmacology, 22:624–632. • Finger, BC,Schellekens, H,Dinan, TG,Cryan, JF; (2011) ‘Is there altered sensitivity to ghrelin-receptor ligands in leptin-deficient mice?: importance of satiety state and time of day’. Psychopharmacology, 216:421–429. • Julio-Pieper M, Flor PJ, Dinan TG, Cryan JF; (2011) ‘Exciting Times beyond the Brain: Metabotropic Glutamate Receptors in Peripheral and Non-Neural Tissues’. Pharmacological reviews. • Kennedy, P.J., G. Clarke, G., Quigley, E.M.M., Groeger., J.A., Dinan., T.G., Cryan. J.F. ; (2011) ‘Gut Memories: Towards a Cognitive Neurobiology of Irritable Bowel Syndrome’. Neuroscience and Biobehavioral Reviews. • McKernan, DP,Gaszner, G,Quigley, EM,Cryan, JF,Dinan, TG; (2011) ‘Altered peripheral toll-like receptor responses in the irritable bowel syndrome’. Alimentary Pharmacology & Therapeutics, 33:1045–1052. • O’Brien FE, Dinan TG, Griffin BT, Cryan JF; (2011) ‘Interactions between antidepressants and P-glycoprotein at the blood-brain barrier: Clinical significance of in vitro and in vivo findings’. British Journal of Pharmacology. • O’Mahony, CM,Clarke, G,Gibney, S,Dinan, TG,Cryan, JF; (2011) ‘Strain differences in the neurochemical response to chronic restraint stress in the rat: Relevance to depression’. Chemistry (Weinheim An Der Bergstrasse, Germany), 97:690–699. • O’Mahony, SM,Coelho, AM,Fitzgerald, P,Lee, K,Winchester, W,Dinan, TG,Cryan, JF; (2011) ‘The effects of gabapentin in two animal models of co-morbid anxiety and visceral hypersensitivity’. European Journal of Pharmacology, 667:169–174. • O’Malley, D,Dinan, TG,Cryan, JF; (2011) ‘Altered expression and secretion of colonic Interleukin-6 in a stress-sensitive animal model of brain-gut axis dysfunction’. The Journal of Immunology, 235:48–55. • O’Sullivan E, Barrett E, Grenham S, Fitzgerald P, Stanton C, Ross RP, Quigley EM, Cryan JF, Dinan TG (2011) ‘BDNF expression in the hippocampus of maternally separated rats: does Bifidobacterium breve 6330 alter BDNF levels?’. Beneficial microbes, 2 (3):199–207.

Return to • O’Tuathaigh CM, Clarke G, Walsh J, Desbonnet L, Petit E, O’Leary C, Tighe O, Clarke N, Karayiorgou M, Gogos JA, Dinan TG, Cryan JF, President’s Report Waddington JL (2011) ‘Genetic vs. pharmacological inactivation of COMT inﬂuences cannabinoid-induced expression of schizophrenia-related phenotypes’. International Journal of Neuropsychopharmacology, :1–12. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxiii

Gahan, Cormac

• Davey, MS,Lin, CY,Roberts, GW,Heuston, S,Brown, AC,Chess, JA,Toleman, MA,Gahan, CGM,Hill, C,Parish, T,Williams, JD,Davies, SJ,Johnson, DW,Topley, N,Moser, B,Eberl, M; (2011) ‘Human Neutrophil Clearance of Bacterial Pathogens Triggers Anti-Microbial gamma delta T Cell Responses in Early Infection’. Plos Pathogens, 7.

• Dowd GC, Casey PG, Begley M, Hill C, Gahan CG (2011) ‘Investigation of the role of ZurR in the physiology and pathogenesis of Listeria monocytogenes’. Fems Microbiology Letters.

• Dowd, GC,Joyce, SA,Hill, C,Gahan, CGM; (2011) ‘Investigation of the Mechanisms by Which Listeria monocytogenes Grows in Porcine Return to Gallbladder Bile’. Infection and Immunity, 79:369–379. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxiv

• McLaughlin HP, Casey PG, Cotter J, Gahan CG and Hill C (2011) ‘Factors affecting survival of Listeria monocytogenes and Listeria innocua in soil samples’. Archives of microbiology, 193 (11):775–785. • McLaughlin HP, Hill C, Gahan CG; (2011) ‘The impact of iron on Listeria monocytogenes; inside and outside the host’. Current opinion in biotechnology, 22 (2):194–199.

Hill, Colin

Peer Reviewed Journals • Casey PG, Hill C, Gahan CG (2011) ‘E. coli O104:H4 social media and the characterization of an emerging pathogen’. Bioengineered Bugs, 2 (3):189–193. • Claesson, Marcus J. and Cusack, Siobhan and O’Sullivan, Orla and Greene-Diniz, Rachel and de Weerd, Heleen and Flannery, Edel and Marchesi, Julian R. and Falush, Daniel and Dinan, Timothy and Fitzgerald, Gerald and Stanton, Catherine and van Sinderen, Douwe and O’Connor, Michael and Harnedy, Norma and O’Connor, Kieran and Henry, Colm and O’Mahony, Denis and Fitzgerald, Anthony P. and Shanahan, Fergus and Twomey, Cillian and Hill, Colin and Ross, R. Paul and O’Toole, Paul W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings Of The National Academy Of Sciences Of The United States Of America, 108 (Suppl. 1):4586–4591. • Clayton, EM,Hill, C,Cotter, PD,Ross, RP; (2011) ‘Real-Time PCR Assay To Differentiate Listeriolysin S-Positive and -Negative Strains of Listeria monocytogenes’. Applied and Environmental Microbiology, 77:163–171. • Collins, B,Cotter, PD,Hill, C,Ross, RP; (2011) ‘The impact of nisin on sensitive and resistant mutants of Listeria monocytogenes in cottage cheese’. Journal of Applied Microbiology, 110:1509–1514. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Arole for proline synthesis and transport in Listeria monocytogenes barotolerance’. Journal of Applied Microbiology, 110:1187–1194. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Novel listerial genetic loci conferring enhanced barotolerance in Escherichia coli’. Journal of Applied Microbiology, 110:618–630. • Davey, MS,Lin, CY,Roberts, GW,Heuston, S,Brown, AC,Chess, JA,Toleman, MA,Gahan, CGM,Hill, C,Parish, T,Williams, JD,Davies, SJ,Johnson, DW,Topley, N,Moser, B,Eberl, M; (2011) ‘Human Neutrophil Clearance of Bacterial Pathogens Triggers Anti-Microbial gamma delta T Cell Responses in Early Infection’. Plos Pathogens, 7. • Dobson, A,Crispie, F,Rea, MC,O’Sullivan, O,Casey, PG,Lawlor, PG,Cotter, PD,Ross, P,Gardiner, GE,Hill, C; (2011) ‘Fate and efficacy of lacticin 3147-producing Lactococcus lactis in the mammalian gastrointestinal tract’. Fems Microbiology Ecology, 76:602–614. • Dobson, A,O’Sullivan, O,Cotter, PD,Ross, P,Hill, C; (2011) ‘High-throughput sequence-based analysis of the bacterial composition of kefir and an associated kefir grain’. Fems Microbiology Letters, 320:56–62. • Dowd GC, Casey PG, Begley M, Hill C, Gahan CG (2011) ‘Investigation of the role of ZurR in the physiology and pathogenesis of Listeria monocytogenes’. Fems Microbiology Letters. Return to President’s Report • Dowd, GC,Joyce, SA,Hill, C,Gahan, CGM; (2011) ‘Investigation of the Mechanisms by Which Listeria monocytogenes Grows in Porcine Gallbladder Bile’. Infection and Immunity, 79:369–379. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxv

• Guinane, Caitriona M. and Kent, Robert M. and Norberg, Sarah and Hill, Colin and Fitzgerald, Gerald F. and Stanton, Catherine and Ross, R. Paul; (2011) ‘Host Specific Diversity in Lactobacillus johnsonii as Evidenced by a Major Chromosomal Inversion and Phage Resistance Mechanisms’. PLOS ONE, 6 (4). • Hein, I,Klinger, S,Dooms, M,Flekna, G,Stessl, B,Leclercq, A,Hill, C,Allerberger, F,Wagner, M; (2011) ‘Stress Survival Islet 1 (SSI-1) Survey in Listeria monocytogenes Reveals an Insert Common to Listeria innocua in Sequence Type 121 L. monocytogenes Strains’. Applied and Environmental Microbiology, 77:2169–2173. • Hill, Colin; (2011) ‘Microbes and food, partners in sickness and in health’. Microbial Biotechnology, 4 (2, Sp. Iss. SI):117–118. • McLaughlin HP, Casey PG, Cotter J, Gahan CG and Hill C (2011) ‘Factors affecting survival of Listeria monocytogenes and Listeria innocua in soil samples’. Archives of microbiology, 193 (11):775–785. • McLaughlin HP, Hill C, Gahan CG; (2011) ‘The impact of iron on Listeria monocytogenes; inside and outside the host’. Current opinion in biotechnology, 22 (2):194–199. • McLaughlin, Heather P. and Hill, Colin and Gahan, Cormac G. M.; (2011) ‘The impact of iron on Listeria monocytogenes; inside and outside the host’. Current Opinion In Biotechnology, 22 (2):194–199. • Mills, S. and Ross, R. P. and Hill, C. and Fitzgerald, G. F. and Stanton, C.; (2011) ‘Milk intelligence: Mining milk for bioactive substances associated with human health’. International Dairy Journal, 21 (6):377–401. • Molloy, Evelyn M. and Cotter, Paul D. and Hill, Colin and Mitchell, Douglas A. and Ross, R. Paul; (2011) ‘Streptolysin S-like virulence factors: the continuing sagA’.Nature Reviews Microbiology, 9 (9):670–681. • Morrissey, R,Begley, M,Oshima, S,Rea, M,Ross, RP,Hill, C; (2011) ‘Real-Time Monitoring of Luciferase-Tagged Cronobacter sakazakii in Reconstituted Infant Milk Formula’. Journal of Food Protection, 74:573–579. • Murphy, K,O’Sullivan, O,Rea, MC,Cotter, PD,Ross, RP,Hill, C; (2011) ‘Genome Mining for Radical SAM Protein Determinants Reveals Multiple Sactibiotic-Like Gene Clusters’. Plos One, 6. • Norberg, S,O’Connor, PM,Stanton, C,Ross, RP,Hill, C,Fitzgerald, GF,Cotter, PD; (2011) ‘Altering the Composition of Caseicins A and B as a Means of Determining the Contribution of Specific Residues to Antimicrobial Activity’. Applied and Environmental Microbiology, 77:2496–2501. • Piper, C,Hill, C,Cotter, PD,Ross, RP; (2011) ‘Bioengineering of a Nisin A-producing Lactococcus lactis to create isogenic strains producing the natural variants Nisin F, Q and Z’.Microbial Biotechnology, 4:375–382. • Preidis GA, Hill C, Guerrant RL, Ramakrishna BS, Tannock GW, Versalovic J; (2011) ‘Probiotics, Enteric and Diarrheal Diseases, and Global Health’. Gastroenterology. • Rea, MC,Dobson, A,O’Sullivan, O,Crispie, F,Fouhy, F,Cotter, PD,Shanahan, F,Kiely, B,Hill, C,Ross, RP; (2011) ‘Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon’. Proceedings of the National Academy of Sciences of the United States of America, 108:4639–4644.

Return to Other President’s Report • Cotter, PD,Ross, RP,Hill, C (2011) Flagging ﬂora: help from bacteriocins?. Other. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxvi

Houston, Aileen

Hyland, Niall

Peer Reviewed Journals • Craig OF, Hyland NP and Quigley EMM; (2011) ‘Functional Dyspepsia — Another Red State! Eosinophils, Macrophages, and Postinfectious Dyspepsia’. Gastroenterology.

Maher, Michael

Peer Reviewed Journals • Crush L, O’Connor OJ, Plant W, Clarkson MR, Shanahan F, Maher MM; (2011) ‘Perplexing plain abdominal x-ray’. Gut, 60 (2). • Hegarty D, O’Connor OJ, Moore M, O’Regan KN, Shorten G, Maher MM; (2011) ‘Association between preoperative magnetic resonance imaging, pain intensity and quantitative sensory testing in patients awaiting lumbar diskectomy’. Journal of Medical Imaging and Radiation Oncology, 55 (1):4–10.

• O’Donoghue K, O’Regan KN, Sheridan CP, O’Connor OJ, Benson J, McWilliams S, Moore N, Murphy MJ, Chopra R, Higgins JR, Maher MM.; (2011) ‘Investigation of the role of computed tomography as an adjunct to autopsy in the evaluation of stillbirth’. European Journal of Radiology.

• O’Neill SB, Maher MM, O’Reilly S; (2011) ‘Tailored Diagnostics: A Proposal’. Journal of Clinical Oncology. • O’Neill SB, O’Connor OJ, McWilliams SR, Shanahan F, Maher MM; (2011) ‘Minimization of radiation exposure due to computed tomography in inﬂammatory bowel disease’. Clinics and research in hepatology and gastroenterology. Return to • Wu CC, Maher MM, Shepard JA; (2011) ‘CT-guided percutaneous needle biopsy of the chest: preprocedural evaluation and technique’. American President’s Report Journal of Roentgenology, 196 (5):1–4. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxvii

• Wu CC, Maher MM, Shepard JA; (2011) ‘Complications of CT-Guided Percutaneous Needle Biopsy of the Chest: Prevention and Management’. American Journal of Roentgenology, 196 (6):1–82.

O’Toole, Paul

• O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional genome analysis of Biﬁdobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222. • Raftis, EJ,Salvetti, E,Torriani, S,Felis, GE,O’Toole, PW; (2011) ‘Genomic Diversity of Lactobacillus salivarius’. Applied and Environmental Microbiology, 77:954–965.

Prentice, Michael

• Prentice, Michael B.; (2011) ‘Plague and other Yersinia infections’ In: Dan L. Longo, Dennis L. Kasper, J. Larry Jameson, Anthony S. Fauci, Stephen L. Hauser, Joseph Loscalzo, Eds (Eds.). Harrison’s Principles and Practice of Internal Medicine. New York: McGraw-Hill.

Peer Reviewed Journals • Prior AR, Bredin CP, Seigne P, Corcoran D, Prentice M; (2011) ‘Anunusual case of Legionellosis’. Irish Medical Journal, 104 (3):89–90.

Quigley, Eamonn

Book Chapters • Abu Shanab A, Quera R, Quigley EMM; (2011) ‘Small intestinal bacterial overgrowth’ In: Textbook of Clinical Gastroenterology and Hepatology 2nd Edition. New York: Elsevier.

• Abu Shanab A, Quera R, Quigley EMM; (2011) ‘Supercrescimento Bacteriano no Intestino Delgado’ In: Gastroenterologia Essencial. Rio de Janeiro: Return to Gianabara Koogan. President’s Report • Quigley EMM; (2011) ‘Colon cancer’ In: Encyclopedia of Dairy Sciences, 2nd Ed. New York: Academic Press. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxviii

• Quigley EMM; (2011) ‘Gatroenterology’ In: Pearls and Pitfalls in Clinical Medicine. Hauppage, New York: Nova Science Publications. • Quigley EMM; (2011) ‘Geriatric Gastroenterology’ In: Irritable Bowel Syndrome. New York: Springer Science. • Quigley EMM; (2011) ‘Megacolon and intestinal pseudo-obstruction’ In: Textbook of Clinical Gastroenterology and Hepatology 2nd Edition. New York: Elsevier. • Quigley EMM; (2011) ‘Which probiotics are best for IBS?’ In: Curbside Consultation in IBS: 49 Clinical Questions. Thorofare, New Jersey: Slack Inc. • Schmidt-Martin D, Quigley EMM; (2011) ‘Organic causes of dyspepsia’ In: Dyspepsia. New York: Springer. • Schmidt-Martin D, Quigley EMM; (2011) ‘The Deﬁnition of Dyspepsia’ In: Dyspepsia. New York: Springer.

Peer Reviewed Journals • Craig OF, Hyland NP, Quigley EM; (2011) ‘Functional Dyspepsia-Another Red State! Eosinophils, MacRophages, and Postinfectious Dyspepsia’. Gastroenterology.

Shanahan, Fergus

Return to • O’Sullivan, A,Gibney, MJ,Connor, AO,Mion, B,Kaluskar, S,Cashman, KD,Flynn, A,Shanahan, F,Brennan, L; (2011) ‘Biochemical and metabolomic President’s Report phenotyping in the identiﬁcation of a vitamin D responsive metabotype for markers of the metabolic syndrome’. Molecular Nutrition and Food Research, 55:679–690. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxix

• Pruteanu, M,Hyland, NP,Clarke, DJ,Kiely, B,Shanahan, F; (2011) ‘Degradation of the Extracellular Matrix Components by Bacterial-derived Metalloproteases: Implications for Inflammatory Bowel Diseases’. Inflammatory Bowel Diseases, 17:1189–1200. • Rea, MC,Dobson, A,O’Sullivan, O,Crispie, F,Fouhy, F,Cotter, PD,Shanahan, F,Kiely, B,Hill, C,Ross, RP; (2011) ‘Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon’. Proceedings of the National Academy of Sciences of the United States of America, 108:4639–4644. • Rosberg-Cody, E,Stanton, C,O’Mahony, L,Wall, R,Shanahan, F,Quigley, EM,Fitzgerald, GF,Ross, RP; (2011) ‘Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice’. Microbiology-SGM, 157:609–615.

Other • Rampton, DS,Shanahan, F (2011) Increased health burden associated with Clostridium difﬁcile diarrhoea in inﬂammatory bowel disease. Other.

Van Sinderen, Douwe

• Cronin, M,Ventura, M,Fitzgerald, GF,van Sinderen, D; (2011) ‘Progress in genomics, metabolism and biotechnology of biﬁdobacteria’. International Journal of Food Microbiology, 149:4–18.

• Douillard, FP,O’Connell-Motherway, M,Cambillau, C,van Sinderen, D; (2011) ‘Expanding the molecular toolbox for Lactococcus lactis: construction of an inducible thioredoxin gene fusion expression system’. Microbial Cell Factories, 10. • Guinane, CM,Barrett, E,Fitzgerald, GF,van Sinderen, D,Ross, RP,Stanton, C (2011) ‘Genome Sequence of Biﬁdobacterium breve DPC 6330, a Strain Isolated from the Human Intestine’. Journal of Bacteriology, 193:6799–6800. • O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston Return to AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional President’s Report genome analysis of Biﬁdobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxx

Analytical and Biological Chemistry Research Facility

Bateman, Lorraine

Collins, Stuart

Crean, Abina

• John B. Carey, Frances E. Pearson, Anto Vrdoljak, Marie G. McGrath, Abina M. Crean, Patrick T. Walsh, Timothy Doody, Conor O’Mahony, Adrian Return to V. S. Hill, Anne C. Moore; (2011) ‘Microneedle Array Design Determines the Induction of Protective Memory CD8+ T Cell Responses Induced by a President’s Report Recombinant Live Malaria Vaccine in Mice’. PloS ONE, 6 (7). UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxi

• McGrath MG, Vrdoljak A, O’Mahony C, Oliveira JC, Moore AC, Crean AM; (2011) ‘Determination of parameters for successful spray coating of silicon microneedle arrays’. International journal of pharmaceutics. • Rakesh Dontireddy, Abina M Crean; (2011) ‘Acomparative study of spray-dried and freeze-dried hydrocortisone/polyvinyl pyrrolidone solid dispersions’. Drug Development and Industrial Pharmacy. • Ring, DT,Oliveira, JCO,Crean, A; (2011) ‘Evaluation of the inﬂuence of granulation processing parameters on the granule properties and dissolution characteristics of a modiﬁed release drug’. Advanced Powder Technology, 22:245–252.

Other Journals • Robert Ahern, Abina Crean & Katie Ryan; (2011) ‘Dissolution enhancement of a poorly water soluble drug’ UKICRS Newsletter.

Conference Publications • D.T, Ring, J.C. Oliveira and A. Crean; (2011) Developing better process understanding; the role of the granulation process, materials properties and storage environment on drug release from a matrix tablet. 5th International Granulation Workshop. • F. F. Farag, M. I. Amaro, A.M. Healy, C. M. O’Driscoll, A. M. Crean; (2011) Stability of Salmon Calcitonin-Sugar Nanoporous Microparticles. 38th Annual Meeting of Controlled Release Society National Harbor, Maryland, U.S.A. • John B. Carey, Frances E. Pearson, Anto Vrdoljak, Abina M. Crean, Conor O’Mahony, Adrian V.S. Hill, Anne C. Moore; (2011) Immunization using ImmuPatch Silicon Microneedle Arrays results in Enhanced T-cell and antibody responses compared to traditional immunization routes. 38th Annual Meeting Controlled Release Society National Harbor, Maryland, U.S.A. • M.G. McGrath, C.O’Mahony, A. Vrdoljak, A.C. Moore, A.M. Crean; (2011) Design of Dissolvable Microneedles for Drug Delivery. 38th Annual Meeting Controlled Release Society National Harbor, Maryland, U.S.A.

• R. J. Ahern, K. B. Ryan, A. M. Crean. (2011) Enhanced dissolution and stability properties of supercritical ﬂuid processed fenoﬁbrate-silica systems. 38th Annual Meeting and Exposition of the Controlled Release Society Maryland, U.S.A, July 2011, 2011–07–30- 2011–08–03.

Fitzpatrick, Dara

Glennon, Jeremy

Peer Reviewed Journals

Return to • J.O. Omamogho, J.P. Hanrahan, J. Tobin, J.D. Glennon (2011) ‘Structural variation of solid core and thickness of porous shell of 1.7 mu core-shell President’s Report silica particles on chromatographic performance: Narrow bore columns’. Journal of Chromatography A, 1218 (15):1942–1953. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxii

• Omamogho Jesse O.; Glennon Jeremy D. (2011) ‘Comparison between the Efﬁciencies of sub-2 mu m C(18) Particles Packed in Narrow Bore Columns’. Analytical Chemistry, 83 (5):1547–1556. • Scully N. M.; Ashu-Arrah B. A.; Nagle A. P.; et al. (2011) ‘Silica hydride intermediate for octadecylsilica and phenyl bonded phase preparation via heterogeneous hydrosilation in supercritical carbon dioxide’. Journal of Chromatography A, 1218 (15):1974–1982. • Zhou, L., Glennon, J.D., Luong, J.H.T., Reen, F.J., O’Gara, F., McSweeney, C., and McGlacken, G.P.; (2011) ‘Detection of the Pseudomonas Quinolone Signal (PQS) by cyclic voltammetry and amperometry using a boron doped diamond electrode’. Chemical Communications, 47 (37):10347–10349.

Keating, J J

Book Chapters • Steven B Kayne (2011) In: An Introduction to Veterinary Medicine. UK: Satire Books.

Bill/Resolution • Members of the Department of Health and Children Designer Drug Committee (2011) Irish Statutory Instrument S.I. 551–553/2011. Bill/Resolution.

Lawrence, Simon

Return to • Eccles,Kevin S.,Stokes,Stephen P.,Daly,Carla A.,Barry,Nicola M.,McSweeney,Sharon P.,O’Neill,Damian J.,Kelly,Dawn M.,Jennings,W. President’s Report Brian,Dhubhghaill,O. M. Ni,Moynihan,Humphrey A.,Maguire,Anita R.,Lawrence,Simon E. (2011) ‘Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist’. Journal of Applied Crystallography, 44 (1). UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxiii

• Fabian,Laszlo,Hamill,Noel,Eccles,Kevin S.,Moynihan,Humphrey A.,Maguire,Anita R.,McCausland,Linda,Lawrence,Simon E. (2011) ‘Cocrystals of Fenamic Acids with Nicotinamide’. Crystal Growth & Design, 11 (8):3522–3528. • Kinsella,Michael,Duggan,Patrick G.,Muldoon,Jimmy,Eccles,Kevin S.,Lawrence,Simon E.,Lennon,Claire M. (2011) ‘Synthesis and NMR Binding Studies towards Rational Design of a Series of Electron-Withdrawing Diamide Receptors/Organocatalysts’. European Journal of Organic Chemistry, (6):1125–1132. • Kissane, M. and Murphy, M. and O’Brien, E. and Chopra, J. and Murphy, L. and Collins, S. G. and Lawrence, S. E. and Maguire, A. R.; (2011) ‘Addition-substitution reactions of 2-thio-3-chloroacrylamides with carbon, nitrogen, oxygen, sulfur and selenium nucleophiles’. Organic and Biomolecular Chemistry, 9:2452–2472. • O’Mahony, GE,Kelly, P,Lawrence, SE,Maguire, AR; (2011) ‘Synthesis of enantioenriched sulfoxides’. Arkivoc, :1–110. • Paluch,Krzysztof J.,Tajber,Lidia,Elcoate,Curtis J.,Corrigan,Owen I.,Lawrence,Simon E.,Healy,Anne Marie. (2011) ‘Solid-state characterization of novel active pharmaceutical ingredients: Cocrystal of a salbutamol hemiadipate salt with adipic acid (2:1:1) and salbutamol hemisuccinate salt’. Journal of Pharmaceutical Sciences, 100 (8):3268–3283.

Maguire, Anita

Peer Reviewed Journals • Deane, FM; Miller, CM; Maguire, AR; McCarthy, FO; (2011) ‘Modiﬁcations to the Vilsmeier-Haack formylation of 1,4-dimethylcarbazole and its application to the synthesis of ellipticines’. Journal of Heterocyclic Chemistry, 48 (4):814–823. • Debarge, S,Balzarini, J,Maguire, AR; (2011) ‘Design and Synthesis of alpha-Carboxy Phosphononucleosides’. The Journal of Organic Chemistry, 76:105–126. • Eccles, KS,Deasy, RE,Fabian, L,Maguire, AR,Lawrence, SE; (2011) ‘The Use of Co-crystals for the Determination of Absolute Stereochemistry: An Alternative to Salt Formation’. The Journal of Organic Chemistry, 76:1159–1162. • Eccles, KS,Stokes, SP,Daly, CA,Barry, NM,McSweeney, SP,O’Neill, DJ,Kelly, DM,Jennings, WB,Dhubhghaill, OMN,Moynihan, HA,Maguire, AR,Lawrence, SE; (2011) ‘Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist?’. Journal of Applied Crystallography, 44:213–215. • Eccles, Kevin S. and Deasy, Rebecca E. and Fabian, Laszlo and Braun, Doris E. and Maguire, Anita R. and Lawrence, Simon E. (2011) ‘Expanding the crystal landscape of isonicotinamide: concomitant polymorphism and co-crystallisation’. Crystal Engineering Communications, 13 (23):6923–6925. • Eccles,Kevin S.,Elcoate,Curtis J.,Maguire,Anita R.,Lawrence,Simon E. (2011) ‘Unzipping the Dimer in Primary Amides by Cocrystallization with Sulfoxides’. Crystal Growth & Design, 11 (10):4433–4439. • Fabian,Laszlo,Hamill,Noel,Eccles,Kevin S.,Moynihan,Humphrey A.,Maguire,Anita R.,McCausland,Linda,Lawrence,Simon E. (2011) ‘Cocrystals of Fenamic Acids with Nicotinamide’. Crystal Growth & Design, 11 (8):3522–3528.

Return to • Foley, David A. and Doecke, Christopher W. and Buser, Jonas Y. and Merritt, Jeremy M. and Murphy, Linda and Kissane, Marie and Collins, Stuart President’s Report G. and Maguire, Anita R. and Kaerner, Andreas (2011) ‘ReactNMR and ReactIR as Reaction Monitoring and Mechanistic Elucidation Tools: The NCS Mediated Cascade Reaction of alpha-Thioamides to alpha-Thio-beta-chloroacrylamides’. Journal of Organic Chemistry, 76 (23):9630–9640. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxiv

• Milner, Sinead Eileen and Brunton, Nigel Patrick and Jones, Peter Wyn and O’Brien, Nora Mary and Collins, Stuart Gerard and Maguire, Anita Rose (2011) ‘Bioactivities of Glycoalkaloids and Their Aglycones from Solanum Species’. Journal of Agricultural and Food Chemistry, 59 (8):3454–3484. • Mitchell, David and Coppert, David M. and Moynihan, Humphrey A. and Lorenz, Kurt T. and Kissane, Marie and McNamara, Orla A. and Maguire, Anita R. (2011) ‘APractical Synthesis of Biaryls via a Thermal Decarboxylative Pd-Catalyzed Cross-Coupling Reaction Operating at Moderate Temperature’. Organic Process Research & Development, 15 (5):981–985. • O’Boyle NM, Vandermeersch T, Flynn CJ, Maguire AR, Hutchison GR; (2011) ‘Confab — Systematic generation of diverse low-energy conformers’. Journal of cheminformatics, 3. • O’Mahony, Graham E. and Kelly, Padraig and Lawrence, Simon E. and Maguire, Anita R. (2011) ‘Synthesis of enantioenriched sulfoxides’. Arkivoc, :1–110. • Rebecca E Deasy, Maude Brossat, Thomas S Moody and Anita R Maguire (2011) ‘Lipase catalysed kinetic resolutions of 3-aryl alkanoic acids’. Tetrahedron: Asymmetry, 22:47–61.

• Slattery, Catherine N. and Maguire, Anita R. (2011) ‘Asymmetric copper-catalysed intramolecular C-H insertion reactions of alpha-diazo-beta-keto sulfones’. Organic & Biomolecular Chemistry, 9 (3):667–669.

Mccarthy, Florence

• Larry T. Pierce, Michael M. Cahill and Florence O. McCarthy ; (2011) ‘Synthesis of novel 3,4-diaryl-5-aminopyrazoles as potential kinase inhibitors’. Tetrahedron, 67 (25):4601–4611. Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxv

• Hannah J. Winﬁeld, Michael M. Cahill, Larry T. Pierce, Florence O. McCarthy; (2011) Synthesis of novel functionalised imidazoles as potential anticancer agents. XXth Conference of the Groupement des Pharmacochimistes de l’Arc Atlantique. • Kieran Greaney and Florence O. McCarthy; (2011) Synthesis of Novel Quinoxalines as Potential HIV Integrase Inhibitors (Bio)Pharmaceutical and Pharmacological Sciences (BPS) Conference Dublin City University, Dublin, 2011–01–11- 2011–01–11. • Michael M. Cahill, Larry T. Pierce, Hannah J. Winﬁeld, Florence O. McCarthy; (2011) Anticancer activity of novel azaindole derivatives related to the bisindolemaleimides. XXth Conference of the Groupement des Pharmacochimistes de l’Arc Atlantique.

Mcglacken, Gerard P.

• Zhou, L., Glennon, J. D., Luong, J. H. T., Reen, F. J., O’Gara, F., McSweeney, C. and McGlacken, G. P. (2011) ‘Detection of Pseudomonas Quinolone Signal (PQS) by cyclic voltammetry and amperometry using a boron doped diamond electrode’. Chem. Commun.

Moynihan, Humphrey

Peer Reviewed Journals • Eccles, KS,Stokes, SP,Daly, CA,Barry, NM,McSweeney, SP,O’Neill, DJ,Kelly, DM,Jennings, WB,Dhubhghaill, OMN,Moynihan, HA,Maguire, AR,Lawrence, SE; (2011) ‘Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist?’. Journal of Applied Crystallography, 44:213–215. • Fabian, Laszlo; Hamill, Noel; Eccles, Kevin; Moynihan, H.; Maguire, Anita; McCausland, Linda; Lawrence, Simon E; (2011) ‘Cocrystals of fenamic acids with nicotinamide’. Crystal Growth and Design, 11:3522–3528.

Ni Dhubhghaill, Orla

O’Boyle, Noel

Edited Books • Noel M O’Boyle (Ed.). (2011) Open Babel — Ofﬁcial User Guide, Raleigh: Lulu Press, Inc.

Peer Reviewed Journals • O’Boyle NM, Vandermeersch T, Flynn CJ, Maguire AR, Hutchison GR; (2011) ‘Confab — Systematic generation of diverse low-energy conformers’. Journal of cheminformatics, 3. • O’Boyle, NM,Campbell, CM,Hutchison, GR; (2011) ‘Computational Design and Selection of Optimal Organic Photovoltaic Materials’. Journal of Physical Chemistry C, 115:16200–16210. • O’Boyle, NM; Banck, M; James, CA; Morley, C; Vandermeersch, T; Hutchison, GR (2011) ‘Open Babel: An open chemical toolbox’. Journal of cheminformatics, 3.

• O’Boyle, NM; Guha, R; Willighagen, EL; Adams, SE; Alvarsson, J; Bradley, JC; Filippov, IV; Hanson, RM; Hanwell, MD; Hutchison, GR; James, CA; Jeliazkova, N; Lang, ASID; Langner, KM; Lonie, DC; Lowe, DM; Pansanel, J; Pavlov, D; Spjuth, O; Steinbeck, C; Tenderholt, AL; Theisen, KJ; Murray-Rust, P (2011) ‘Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk ﬁve years on’. Journal of cheminformatics, 3.

Conference Publications • O’Boyle, NM (2011) Cinfony — Bringing cheminformatics toolkits into tune. Wellcome Trust Workshop on Molecular Informatics Open Source Software (MIOSS) Hinxton, UK, 2011–05–04- 2011–05–06. • O’Boyle, NM (2011) Improving the quality of chemical databases with community-developed tools (and vice versa). 5th Meeting on US Government Chemical Databases and Open Chemistry, Frederick (Maryland), US, 2011–08–25- 2011–08–26. • O’Boyle, NM (2011) The Blue Obelisk community. Visions of a Semantic Molecular Future — A symposium to celebrate the career of Peter Murray-Rust Cambridge, UK, 2011–01–17- 2011–01–17.

Published Reports • Noel M O’Boyle; (2011) Review of Data Analysis with Open Source Tools by Philipp K Janert. BioMedCentral.

Omamogho, Jesse

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxvii

Papkovsky, Dmitri

Peer Reviewed Journals • Borchert, NB,Ponomarev, GV,Kerry, JP,Papkovsky, DB; (2011) ‘O2/pH Multisensor Based on One Phosphorescent Dye’. Analytical Chemistry, 83:18–22.

Pravda, Miloslav

Book Chapters • Miloslav Pravda; (2011) ‘Electrochemical Analysis’ In: John W. Fuquay, Patrick Fox, Paul McSweeney (Eds.). Encyclopedia of Dairy Sciences 2nd Edition. Amsterdam: Elsevier.

Anu Research Centre

Greene, Richard

• Lutomski, JE,Morrison, JJ,Greene, RA,Lydon-Rochelle, MT; (2011) ‘Maternal Morbidity During Hospitalization for Delivery’. Obstetrics and Gynecology, 117:596–602.

• McNamara K, O’Donoghue K, O’Connell O and Greene RA; (2011) ‘Antenatal and Intrapartum Care of Pregnancy with lethal fetal anomaly’. The Obstetrician & Gynaecologist. Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxviii

Higgins, John

Kenny, Louise

Book Chapters • Ofﬁah I, O’Donoghue K and Kenny LC; (2011) ‘Clinical Risk Factors for Preterm Birth’ In: Preterm Birth. Croatia: InTech.

Peer Reviewed Journals • Brown, M,Wedge, DC,Goodacre, R,Kell, DB,Baker, PN,Kenny, LC,Mamas, MA,Neyses, L,Dunn, WB; (2011) ‘Automated workflows for accurate mass-based putative metabolite identification in LC/MS-derived metabolomic datasets’. Bioinformatics (Oxford, England), 27:1108–1112. • Hawkes CP, Hourihane JO, Kenny LC, Irvine AD, Kiely M, Murray DM; (2011) ‘Gender- and Gestational Age-Specific Body Fat Percentage at Birth’. Pediatrics. • Horgan RP, Broadhurst DI, Walsh SK, Dunn WB, Brown M, Roberts CT, North RA, McCowan LM, Kell DB, Baker PN, Kenny LC; (2011) ‘Metabolic profiling uncovers a phenotypic signature of small for gestational age in early pregnancy’. Journal of Proteome Research, 10 (8):3660–3673. • Khashan AS, Kenny LC, Laursen TM, Mahmood U, Mortensen PB, Henriksen TB, O’Donoghue K; (2011) ‘Pregnancy and the risk of autoimmune disease’. Plos One, 6 (5). • Khashan AS, Kenny LC; (2011) ‘Re: Narchi H, Skinner A. 2010. Overweight and obesity in pregnancy do not adversely affect neonatal outcomes: new evidence. Journal of Obstetrics and Gynaecology 30:679–686’. Journal of Obstetrics and Gynaecology, 31 (4):1–3. Return to President’s Report • Khashan AS, McNamee R, Henriksen TB, Pedersen MG, Kenny LC, Abel KM, Mortensen PB; (2011) ‘Risk of affective disorders following prenatal exposure to severe life events: A Danish population-based cohort study’. Journal of Psychiatric Research. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxxxix

• McCarthy FP, Drewlo S, English FA, Kingdom J, Johns EJ, Kenny LC, Walsh SK (2011) ‘Evidence implicating peroxisome proliferator-activated receptor-Î3 in the pathogenesis of preeclampsia’. Hypertension, 58 (5):882–887. • McCarthy FP, Drewlo S, Kingdom J, Johns EJ, Walsh SK, Kenny LC; (2011) ‘Peroxisome Proliferator-Activated Receptor-gamma as a Potential Therapeutic Target in the Treatment of Preeclampsia’. Hypertension, 58 (2):280–286. • McCarthy FP, Kingdom JC, Kenny LC, Walsh SK; (2011) ‘Animalmodels of preeclampsia; uses and limitations’. Placenta, 32 (6):413–419.

• Murphy NM, Broadhurst D, Gilligan O,Jabarudin WNE, Khashan A, O’Donoghue K and Kenny LC; (2011) Establishing Reference Ranges for D-dimers in Normal Pregnancy. Society for Gynecological Investigation Annual Meeting.

Muttukrishna, Shanthi

• Evans P, Cindrova-Davies T, Muttukrishna S, Burton GJ, Porter J, Jauniaux E; (2011) ‘Hepcidin and iron species distribution inside the First Trimester Human Gestational Sac’. Molecular Human Reproduction, 17 (4):227–232.

O’Donoghue, Keelin

Book Chapters • O’Donoghue, K.; (2011) ‘Medical Disorders in Pregnancy’ In: Obstetrics for Ten Teachers. London: Hodder and Stoughton Ltd.

• O’Donoghue, K.; (2011) ‘Physiological changes in Pregnancy’ In: Obstetrics for Ten Teachers. London: Hodder and Stoughton Ltd. Return to President’s Report • Ofﬁah I, O’Donoghue K and Kenny LC; (2011) ‘Clinical Risk Factors for Preterm Birth’ In: Preterm Birth. Croatia: InTech. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxl

• R O’Loughlin and K O’Donoghue (2011) ‘Risk Factors for First Trimester Miscarriage’ In: Miscarriage. New York: Nova Science Publishers. • Unterscheider J and O’Donoghue K; (2011) ‘Reduced Fetal Movements’ In: Obstetrics. Croatia: In Tech.

Peer Reviewed Journals • Bartels Aenne and O’Donoghue Keelin; (2011) ‘Cholesterol in Pregnancy — a review of knowns and unknowns’. Obstetric Medicine.

• Ismail KI, Brennan DB, Marchocki Z, O’Donoghue K; (2011) ‘Intrapartum Cesarean Rates differ signiﬁcantly between ethnic groups — relationship to induction’. European Journal of Obstetrics & Gynecology and Reproductive Biology. • Khashan, AS,Kenny, LC,Laursen, TM,Mahmood, U,Mortensen, PB,Henriksen, TB,O’Donoghue, K; (2011) ‘Pregnancy and the Risk of Autoimmune Disease’. Plos One, 6. • McNamara K, O’Donoghue K, O’Connell O and Greene RA; (2011) ‘Antenatal and Intrapartum Care of Pregnancy with lethal fetal anomaly’. The Obstetrician & Gynaecologist. • N Egan, A Bartels, AS Khashan, DI Broadhurst, C Joyce, J O’Mullane, K O’Donoghue (2011) ‘Reference Standard For Serum Bile Acids In Pregnancy’. British Journal Obstetrics and Gynaecology.

• O’Donoghue K, O’Regan KN, Sheridan CP, O’Connor OJ, Benson J, McWilliams S, Moore N, Murphy MJ, Chopra R, Higgins JR, Maher MM; (2011) ‘Investigation of the role of computed tomography as an adjunct to autopsy in the evaluation of stillbirth’. European Journal of Radiology.

• O’Donoghue K; (2011) ‘Pregnancy and the risk of autoimmune disease — an exploration’. Chimera. • Ooi, P.V., Russell, N., O’Donoghue, K.; (2011) ‘Secondary recurrent miscarriage is associated with previous male birth’. Journal of Reproductive Immunology, 88 (1):38–41. • Peer, M and O’Donoghue K; (2011) ‘Osteopetrosis in Pregnancy — a rare case report’. Obstetric Medicine.

• Bartels Ä, Egan N, Khashan A, Joyce C, O’Mullane J, O’Donoghue K; (2011) Maternal cholesterol levels are elevated throughout normal pregnancy. Society for Maternal and Fetal Medicine Annual Meeting.

• C. McCarthy, K. O’Donoghue; (2011) Improving The Perinatal Medicine Clinic In Cork University Maternity Hospital. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. • C. O’Loughlin, M. Cunningham, K. O’Donoghue; (2011) Can ultrasound at thirty-two weeks gestation predict presentation of twins at time of delivery? Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. Return to President’s Report • Durand O’Connor A, O’ Donoghue K; (2011) Diagnosis Of Missed Miscarriage At Cork University Maternity Hospital. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxli

• Egan N, Bartels Ä, Khashan A, Broadhurst D, Joyce C, O’Mullane J, O’Donoghue K; (2011) Serum bile acids are not elevated in healthy pregnancy. Perinatal Medicine 2011, British Maternal and Fetal Medicine 16th Annual Meeting. • I Ofﬁah, K. O’Donoghue ; (2011) An audit of amniocentesis at CUMH. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. • Khalid AS, Marchocki Z, Joyce C, O’Mullane J, O’Donoghue K; (2011) Establishing Trimester Speciﬁc Reference Ranges for Maternal Thyroid Function. Society for Gynecological Investigation Annual Meeting.

• Khalid AS, Marchocki Z, O’Sullivan R, Joyce C, Stapleton M, O’Mullane J, O’Donoghue K; (2011) Establishing Trimester Speciﬁc Maternal Thyroid Function Reference Intervals. Perinatal Medicine 2011, British Maternal and Fetal Medicine 16th Annual Meeting.

• Khalid AS, Marchocki Z, O’Sullivan R, Joyce C, Stapleton M, O’Mullane J, O’Donoghue K; (2011) Establishing trimester speciﬁc maternal thyroid function reference ranges. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland.

• M. Butler, P. O’Leary, K. O’Donoghue; (2011) Review Of The Use Of Blood Products In The Obstetric Population In Cork University Maternity Hospital. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland.

• M. Peer, K. O’Donoghue; (2011) Osteopetrosis in pregnancy — a case report. Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland. • Mahmood U, Fitzgibbon J and O’Donoghue K; (2011) Fetal cells play a role in maternal wound healing after pregnancy. Perinatal Medicine 2011, British Maternal and Fetal Medicine 16th Annual Meeting. • Mahmood U, Fitzgibbon J, O’Donoghue K; (2011) Microchimeric Fetal Cells are involved in Maternal Wound healing after pregnancy. Society for Gynecological Investigation Annual Meeting. • Murphy NM, Broadhurst D, Gilligan O,Jabarudin WNE, Khashan A, Kenny LC and O’Donoghue K ; (2011) Cross-sectional study to identify ranges of D-Dimers in pregnancy. Society for Maternal and Fetal Medicine Annual Meeting.

• O’Loughlin C, Cunningham M, O’Donoghue K; (2011) Can ultrasound at 32 weeks gestation predict presentation of twins at delivery? Perinatal Medicine 2011, British Maternal and Fetal Medicine 16th Annual Meeting. • U Mahmood, J F. Fitzgibbon, K O’Donoghue; (2011) Do children heal their mother’s wounds? Junior Obstetrics and Gynaecology Meeting, Institute of Obstetricians and Gynaecologists of the Royal College of Physicians of Ireland.

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxlii

BioTransfer Unit

Fitzgerald, Gerald F.

• Cronin, M,Ventura, M,Fitzgerald, GF,van Sinderen, D; (2011) ‘Progress in genomics, metabolism and biotechnology of biﬁdobacteria’. International Journal of Food Microbiology, 149:4–18.

• Doherty, SB,Gee, VL,Ross, RP,Stanton, C,Fitzgerald, GF,Brodkorb, A; (2011) ‘Development and characterisation of whey protein micro-beads as potential matrices for probiotic protection’. Food Hydrocolloids, 25:1604–1617. • Fallico, V,McAuliffe, O,Fitzgerald, GF,Ross, RP; (2011) ‘Plasmids of Raw Milk Cheese Isolate Lactococcus lactis subsp lactis Biovar diacetylactis DPC3901 Suggest a Plant-Based Origin for the Strain’. Applied and Environmental Microbiology, 77:6451–6462. • Kearney, N,Stack, HM,Tobin, JT,Chaurin, V,Fenelon, MA,Fitzgerald, GF,Ross, RP,Stanton, C; (2011) ‘Lactobacillus paracasei NFBC 338 producing recombinant beta-glucan positively inﬂuences the functional properties of yoghurt’. Rna-A Publication of The Rna Society, 21:561–567. • Mills, S. and Ross, R. P. and Hill, C. and Fitzgerald, G. F. and Stanton, C.; (2011) ‘Milk intelligence: Mining milk for bioactive substances associated with human health’. International Dairy Journal, 21 (6):377–401.

• Pokusaeva, K,O’Connell-Motherway, M,Zomer, A,MacSharry, J,Fitzgerald, GF,van Sinderen, D; (2011) ‘Cellodextrin Utilization by Biﬁdobacterium breve UCC2003’. Applied and Environmental Microbiology, 77:1681–1690. • Rosberg-Cody, E,Liavonchanka, A,Gobel, C,Ross, RP,O’Sullivan, O,Fitzgerald, GF,Feussner, I,Stanton, C; (2011) ‘Myosin-cross-reactive antigen (MCRA) protein from Biﬁdobacterium breve is a FAD-dependent fatty acid hydratase which has a function in stress protection’. Chemistry (Weinheim An Der Bergstrasse, Germany), 12.

• Rosberg-Cody, E,Stanton, C,O’Mahony, L,Wall, R,Shanahan, F,Quigley, EM,Fitzgerald, GF,Ross, RP; (2011) ‘Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice’. Microbiology-SGM, 157:609–615. • Russell, DA,Ross, RP,Fitzgerald, GF,Stanton, C; (2011) ‘Metabolic activities and probiotic potential of biﬁdobacteria’. International Journal of Food Microbiology, 149:88–105.

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxliii

Biomerit Research Centre

Morrissey, John

• Barret, M., Morrissey, J.P., and O’Gara, F.; (2011) ‘Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence’. Biology and Fertility of Soils, 47 (7):729–743.

• Holcombe, L.J., O’Gara, F., and Morrissey, J.P. (2011) ‘Implications of interspecies signaling for virulence of bacteria and fungal pathogens’. Future Microbiology, 6 (7):799–817. • Kennedy, J., O’Leary, N., Kiran, S., Morrissey, J., O’Gara, F., Selvin, J. and Dobson, A.D.W. (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications’. Journal of applied microbiology, 111:787–799. • Kennedy, J., O’Leary, N.D., Kiran, G.S., Morrissey, J.P., O’Gara, F., Selvin, J., and Dobson, A.D.W.; (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems’. Journal of applied microbiology, 111 (4):787–799. • Lane, M. M.,Burke, N.,Karreman, R.,Wolfe, K. H.,O’Byrne, C. P.,Morrissey, J. P.; (2011) ‘Physiological and metabolic diversity in the yeast Kluyveromyces marxianus’. Antonie Van Leeuwenhoek. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Ahigh-throughput screen to identify novel calcineurin inhibitors’. Journal of Microbiological Methods.

• Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Diversity and anti-microbial activity of bacteria from the coastal marine sponges Amphilectus fucorum and Eurypon major’. Letters In Applied Microbiology.

• O’ Halloran JA,Barbosa, T. M.,Morrissey, J. P.,Kennedy, J.,Gara, F. O.,Dobson, A. D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. J Appl Microbiol.

Return to • Phelan, R.W., Clarke, C., Barbosa, T., Morrissey, J.P., Dobson, A.D.W. and O’Gara, F. ; (2011) ‘Atetracycline resistance encoding plasmid from a President’s Report Bacillus sp. strain isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77:327–329. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxliv

O’Gara, Fergal

Peer Reviewed Journals • Barret, M., Egan, F., Fargier, E., Morrissey, J.P., and O’Gara, F.; (2011) ‘Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered’. Microbiology Journal, 157 (Pt 6):1726–1739. • Barret, M., Morrissey, J.P., and O’Gara, F.; (2011) ‘Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence’. Biology and Fertility of Soils, 47 (7):729–743. • Flemer B, Kennedy J, Margassery LM, Morrissey JP, O’Gara F, Dobson AD. (2011) ‘Diversity and antimicrobial activities of microbes from two Irish marine sponges, Suberites carnosus and Leucosolenia sp’. Journal of applied microbiology. • Holcombe, L.J., O’Gara, F., and Morrissey, J.P. (2011) ‘Implications of interspecies signaling for virulence of bacteria and fungal pathogens’. Future Microbiology, 6 (7):799–817. • Kennedy, J., O’Leary, N.D., Kiran, G.S., Morrissey, J.P., O’Gara, F., Selvin, J., and Dobson, A.D.W.; (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems’. Journal of applied microbiology, 111 (4):787–799. • Legendre, C., Mooij, M.J., Adams, C., and O’Gara, F.; (2011) ‘Impaired expression of hypoxia-inducible factor-1α in cystic ﬁbrosis airway epithelial cells — A role for HIF-1 in the pathophysiology of CF?’. Journal of Cystic Fibrosis, 10 (4):286–290. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Ahigh-throughput screen to identify novel calcineurin inhibitors’. Journal of Microbiological Methods. • O’ Halloran, J.A., Barbosa, T.M., Morrissey, J.P., Kennedy, J., O’Gara, F., and Dobson, A.D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. Journal of applied microbiology, 110 (6):1495–1508. • O’Callaghan, J., Reen, F.J., Adams, C., and O’Gara, F. (2011) ‘Low oxygen induces the T3SS in Pseudomonas aeruginosa via modulation of the small RNAs, rsmZ and rsmY’.Microbiology. • Phelan RW, O’ Halloran JA, Kennedy J, Morrissey JP, Dobson AD, O’Gara F, Barbosa TM. (2011) ‘Diversity and bioactive potential of endospore-forming bacteria cultured from the marine sponge Haliclona simulans’. Journal of applied microbiology. Return to President’s Report • Phelan, R.W., Clarke, C., Morrissey, J.P., Dobson, A.D., O’Gara, F., and Barbosa, T.M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77 (1):327–329. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxlv

Biosciences Institute

Horgan, Conor

Peer Reviewed Journals • Horgan CP, McCaffrey MW; (2011) ‘Rab GTPases and microtubule motors’. Biochemical Society Transactions, 39 (5):1202–1206. • Horgan, CP,Hanscom, SR,McCaffrey, MW; (2011) ‘Dynein LIC1 localizes to the mitotic spindle and midbody and LIC2 localizes to spindle poles during cell division’. Cell biology international, 35:171–178. • Kelly EE, Giordano F, Horgan CP, Jollivet F, Raposo G, McCaffrey MW (2011) ‘Rab30 is required for the morphological integrity of the Golgi apparatus’. Biology of The Cell / Under The Auspices of The European Cell Biology Organization. • Kelly EE, Horgan CP, McCaffrey MW, Young P; (2011) ‘The role of endosomal-recycling in long-term potentiation’. Cellular and Molecular Life Sciences, 68 (2):185–194.

Tangney, John Mark

Book Chapters • Collins SA, Morrissey D, Rajendran S, Casey G, Scallan MF, Harrison PT, O’Sullivan GC, Tangney M. ; (2011) ‘Comparison of DNA Delivery and Expression Using Frequently Used Delivery Methods’ In: Chunsheng Kang (Eds.). Gene Therapy — developments and future perspectives. Croatia: InTech.

Peer Reviewed Journals • Ahmad, S.,Casey, G.,Cronin, M.,Rajendran, S.,Sweeney, P.,Tangney, M.,O’Sullivan, G. C.; (2011) ‘Induction of Effective Antitumor Response After Mucosal Bacterial Vector Mediated DNA Vaccination With Endogenous Prostate Cancer Speciﬁc Antigen’. J Urol. Return to President’s Report • Bourke, M. G.,Salwa, S.,Harrington, K. J.,Kucharczyk, M. J.,Forde, P. F.,de Kruijf, M.,Soden, D.,Tangney, M.,Collins, J. K.,O’Sullivan, G. C.; (2011) ‘The emerging role of viruses in the treatment of solid tumours’. Cancer Treat Rev. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxlvi

• Rajendran, S.,Collins, S.,V. A. N. Pijkeren JP,O’Hanlon, D.,O’Sullivan, G. C.,Tangney, M.; (2011) ‘Targeting of Breast Metastases Using a Viral Gene Vector with Tumour-selective Transcription’. Anticancer Res, 31 (55):1627–351627. • Rajendran, S.,O’Hanlon, D.,Morrissey, D.,O’Donovan, D.,O’Sullivan, G.C.,Tangney, M.; (2011) ‘Preclinical Evaluation Of Gene Delivery Methods For The Treatment Of Loco-Regional Disease In Breast Cancer’. Exp Biol Med, 236 (4):423–434.

Boole Centre for Research in Informatics

Morrison, John

Peer Reviewed Journals • Deepak Ajwani, John Morrison ; (2011) ‘AFlexible workload generator for simulating stream computing systems’.

Seda, Anthony

Edited Books • T. Neary, A.K. Seda and D. Woods (Ed.). (2011) Proceedings of CSP’08 (Selected Papers), NUI, Cork, December, 2008, The Netherlands: Elsevier Science Publishers.

Stynes, Martin

• Franz, S.; Kellogg, R.B.; Stynes, M. (2011) ‘Galerkin and streamline diffusion ﬁnite element methods on a Shishkin mesh for a convection-diffusion problem with corner singularities’. Mathematics of Computation. • Kopteva, N; Stynes, M (2011) ‘Approximation of interior-layer solutions in a singularly perturbed semilinear reaction-diffusion problem’. Numerische Mathematik, 119 (4):787–810. • Liu, F; Stynes, M; Zhou, A; (2011) ‘Improved accuracy of two-scale ﬁnite element discretizations by postprocessing, Part I’.SIAM Journal on Numerical Analysis, 49 (5):1947–1971. • Shishkin, G., Shishkina, L.P., Cronin, K., Stynes, M., Viscor, M.; (2011) ‘Anumerical method for a Stefan-type problem’. Mathematical Modelling and Analysis, 16 (1):119–142.

Conference Publications Return to • Franz, S.; Kellogg, R.B.; Stynes, M. (2011) On the choice of mesh for a singularly perturbed problem with a corner singularity. In: Clavero, C.; Gracia, President’s Report J.L.; Lisbona, F eds. BAIL 2010 – Boundary and Interior Layers, Computational and Asymptotic Methods. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxlvii

Tabirca, Marius-Sabin

CELT –- Corpus of Electronic Texts

Faerber, Beatrix

Book Chapters • Emer Purcell, Paul MacCotter, Julianne Nyhan, John Sheehan; (2011) ‘The Fortunes of CELT’ In: Clerics, Kings and Vikings: essays on Medieval Ireland. Dublin: Four Courts Press.

Cancer Biology at UCC

O’Connor, Rosemary

Peer Reviewed Journals • Cao W, Ryan M, Buckley D, O’Connor R, Clarkson MR (2011) ‘Tim-4 inhibition of T-cell activation and T helper type 17 differentiation requires both the immunoglobulin V and mucin domains and occurs via the mitogen-activated protein kinase pathway’. The Journal of Immunology, 133 (2):179–189. Return to President’s Report • Neasta J, Kiely PA, He DY, Adams DR, O’Connor R, Ron D (2011) ‘Direct interaction between the scaffolding proteins RACK1 and 14–3-3ζ regulates brain-derived neurotrophic factor (BDNF) transcription’. The Journal of Biological Chemistry. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxlviii

Ruth, Albert

Peer Reviewed Journals • A. McCarthy and A.A. Ruth; (2011) ‘Fluorescence excitation and excited state intramolecular proton transfer of jet-cooled naphtol derivatives: Part 1. 1-hydroxy-2-naphthaldehyde’. Physical Chemistry Chemical Physics, 13 (16):7485–7499. • Nitschke, U; Ruth, AA; Dixneuf, S; Stengel, DB; (2011) ‘Molecular iodine emission rates and photosynthetic performance of different thallus parts of Laminaria digitata (Phaeophyceae) during emersion’. Planta, 233:737–748. Venables, Dean

Byrne, Noreen

Book Chapters Return to • Byrne, N; Ward, M; Prendergast, K and C. Power; (2011) ‘Mergers and Federation: A place for both in the development of Irish Credit Unions’ In: President’s Report Power, C; O’Connor, R, McCarthy, O and M. Ward (Eds.). The Orgins, Ethos and Evolution of Co-operative Credit in Ireland. Cork: University College Cork. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxlix

Carroll, Bridget

Mccarthy, Olive

Book Chapters • Byrne, N., Power, C., McCarthy, O. and Ward, M.; (2011) ‘The role of credit unions in ﬁnancial capability’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • McCarthy O. (2011) ‘From the US to Cork: a brief history of the founding of Ballyphehane Credit Union’ In: The Origins, Ethos and Evolution of Co-operative Credit in Ireland: Celebrating the Centenary of the Birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC.

Published Reports • Moroney A., Briscoe R., McCarthy O., O’Shaughnessy M., Ward M. (2011) Effective structures for farmers’ markets in Ireland. Department of Agriculture.

O’Shaughnessy, Mary

Peer Reviewed Journals • O’Shaughmnessy M. Casey E & Enright, P.; (2011) ‘Rural transport in peripheral rural areas: The role of social enterprises in meeting the needs of Return to rural citizens’. Social Enterprise Journal, 7 (2):183–190. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccl

Book Chapters • Byrne N., Ward M., Prendergast K., Power C. (2011) ‘Amalgamationand federated co-operative models: A place for both in the development of the Irish credit union movement’ In: Power C., O’Connor R., McCarthy O., Ward M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • Byrne, N., Power, C., McCarthy, O. and Ward, M.; (2011) ‘The role of credit unions in ﬁnancial capability’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • McCarthy, O., Briscoe R. and Ward M.; (2011) ‘Anoverview of co-operatives and the co-operative ethos in Ireland’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. • Power, C., O’Connor, R., McCarthy, O. and Ward, M.; (2011) ‘Credit unions and community wellbeing’ In: Power, C., O’Connor, R., McCarthy, O. and Ward, M (Eds.). The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the centenary of the birth of Nora Herlihy. Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. Edited Books • Power, C., O’Connor, R., McCarthy, O. and Ward, M (Ed.). (2011) The origins, ethos and evolution of co-operative credit in Ireland: Celebrating the Centenary of the birth of Nora Herlihy, Cork: Duhallow Women’s Forum and Centre for Co-operative Studies, UCC. Peer Reviewed Journals • Murtagh, A. & Ward M. (2011) ‘Structure and Culture: The Evolution of Irish Agricultural Cooperation’. Journal of Rural Co-Operation, 39 (2). Centre for Criminal Justice and Human Rights

Donnelly, Mary

Books Return to • Donnelly Mary ; (2011) The Law of Credit and Security. Dublin: Round Hall. President’s Report • McCarthy J; Donnelly M; Dooley D; Campbell L; Smith D; (2011) End-of-Life Care: Ethics and Law. Cork: Cork University Press. UCC Research Publications 2011–2012 | Research Centres and Institutes ccli

Peer Reviewed Journals • Donnelly Mary ; (2011) ‘Home Loan Repossessions: Powers and Obligations’. Commercial Law Practitioner, 18 (5):95–103. • Donnelly, M; (2011) ‘Determining Best Interests Under the Mental Capacity Act’. Medical Law Review, 19:304–313.

• Mary Donnelly Ursula Kilkelly; (2011) ‘Child friendly healthcare: delivering on the right to be heard’. Medical Law Review, 19 (1):27–54. • Mary Donnelly and Maeve McDonagh; (2011) ‘Keeping the Secrets of the Dead?: An Evaluation of the Statutory Framework for Access to Information about Decesased Persons’. Legal Studies, 31 (1):42–70. • U Kilkelly and M Donnelly (2011) ‘Participation in Healthcare: The Views and Experiences of Children and Young People’. International Journal of Children’s Rights, 19 (1):107–125.

Kilcommins, Shane

Book Chapters • Shane Kilcommins; (2011) ‘Criminal Justice ‘Psychoactive Substances Act 2010’ In: Irish Current Law Statutes Annotated. Dublin: Thomson Round Hall. • shane Kilcommins; (2011) ‘Regulatory Crime’ In: M Butler, ed, Criminal Litigation, 3rd ed. Oxford: OUP.

• shane kilcommins; (2011) ‘Criminal Evidence’ In: J Schweppe and T Mohr, eds, IALT Collection of Essays (Dublin: Thomson, Round Hall). Dublin: Thomson round Hall.

Peer Reviewed Journals • shane Kilcommins; (2011) ‘where is our criminal justice system going’. Irish Probation Journal.

Madden, Deirdre

Books • Madden D (2011) Medicine, Ethics and the Law. Dublin: Bloomsbury Professional.

Return to Other Journals President’s Report • Madden D (2011) ‘Assisted Reproduction in Ireland — Time to legislate’ Medico-Legal Journal of Ireland, 17 (1). UCC Research Publications 2011–2012 | Research Centres and Institutes cclii

Mcdonagh, Maeve

Mullally, Siobhan

Edited Books • Mullally S and Allain J (Ed.). (2011) Irish Yearbook of International Law (2008) vol 3, Oxford: Hart.

• Mullally S; (2011) ‘Domestic Violence Asylum Claims and Recent Developments in International Human Rights Law: a progress narrative?’. International and Comparative Law Quarterly.

• S Mullally (2011) ‘Women Peace and Security in Pakistan: the Challenge of Security Council Resolution 1325’. Irish Studies In International Affairs, 22:53–66.

O’Mahony, Conor

Peer Reviewed Journals Return to • Conor O’Mahony; (2011) ‘There is No Such Thing as a Right to Dignity’. International Journal of Constitutional Law. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccliii

Whelan, Darius

Peer Reviewed Journals • Whelan, Darius; (2011) ‘Can the Right to Personal Liberty be Interpreted in a Paternalistic Manner?: Cases on the Mental Health Act 2001’. Irish Human Rights Law Review, 2.

Wills, Siobhan

Centre for Efﬁciency-Oriented Languages

Popovici, Emanuel

Centre for Investment Research

Hutchinson, Mark

Peer Reviewed Journals • Connolly C. and Hutchinson M. C.; (2011) ‘Dedicated Short Bias Hedge Funds: Diversiﬁcation and Alpha during Financial Crises’. The Journal of Alternative Investments.

• D. Bowen, M. Hutchinson and N. O’ Sullivan; (2011) ‘Predictability Revisited: UK Equity Returns, 1965 — 2007’. Irish Accounting Review.

O’Sullivan, Niall

Peer Reviewed Journals Return to • D. Bowen, M. Hutchinson and N. O’ Sullivan; (2011) ‘Predictability Revisited: UK Equity Returns, 1965 — 2007’. Irish Accounting Review. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccliv

Centre for Research in Vascular Biology

Caplice, Noel

Peer Reviewed Journals • Caplice NM (2011) ‘Role of vessel wall and bone marrow syndecan-4 in newintimal hyperplasia: the plot thickens’. Arteriosclerosis Thrombosis and Vascular Biology. • Clover AJ, Kumar AH, Caplice NM; (2011) ‘Deﬁciency of CX3CR1 delays burn wound healing and is associated with reduced myeloid cell recruitment and decreased sub-dermal angiogenesis’. Burns: journal of the International Society for Burn Injuries. • Hynes B, Kumar AH, O’Sullivan J, Klein Buneker C, Leblond AL, Weiss S, Schmeckpeper J, Martin K, Caplice NM (2011) ‘Potent endothelial progenitor cell-conditioned media-related anti-apoptotic, cardiotrophic, and pro-angiogenic effects post-myocardial infarction are mediated by insulin-like growth factor-1’. European Heart Journal. • Kumar AH, McCauley SD, Hynes BG, O’Dea J, Caplice NM; (2011) ‘Improved protocol for processing stented porcine coronary arteries for immunostaining’. Journal of Molecular Histology, 42 (2):187–193. • Kumar, AHS,McCauley, SD,Hynes, BG,O’Dea, J,Caplice, NM; (2011) ‘Improved protocol for processing stented porcine coronary arteries for immunostaining’. Rna-A Publication of The Rna Society, 42:187–193.

• O’Sullivan JF, Martin K, Caplice NM; (2011) ‘Microribonucleic acids for prevention of plaque rupture and instent restenosis’. Journal of the American College of Cardiology, 57 (4):383–389. • Pierce WG, Zanette C, Caplice NM, Mackrill JJ (2011) ‘Calcium signalling in adult endothelial outgrowth cells’. Biochemical and Biophysical Research Communications.

Other Journals • Martin K, O’Sullivan JF, Caplice NM (2011) ‘New therapeutic potential of microRNA treatment to target vulnerable atherosclerotic lesions and Return to plaque rupture’ Current Opinion in Cardiology, 26 (6):569–575. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cclv

Kumar, Arun

• A.J.P. Clover, B. Lane O’Neill and Arun HS Kumar. (2011) ‘Analysisof public attitudes towards the use of autologous and allogenic cells in tissue engineering products for burns’. British Journal of Surgery, 98 (52 BP6). • Brian Hynes, Arun HS Kumar, John O’Sullivan, Chirlei Klein Buneker, Anne-Laure Leblond, Sharon Weiss, Jeffrey Schmeckpeper, Kenneth Martin, Noel M Caplice; (2011) ‘Potent EPC conditioned media related anti-apoptotic, cardiotrophic and proangiogenic effects post myocardial infarction are mediated by IGF-1’. European Heart Journal.

Return to • Clover AJ, Kumar AH, Caplice NM; (2011) ‘Deﬁciency of CX3CR1 delays burn wound healing and is associated with reduced myeloid cell President’s Report recruitment and decreased sub-dermal angiogenesis’. Burns: journal of the International Society for Burn Injuries. UCC Research Publications 2011–2012 | Research Centres and Institutes cclvi

• Kumar AH, McCauley SD, Hynes BG, O’Dea J, Caplice NM; (2011) ‘Improved protocol for processing stented porcine coronary arteries for immunostaining’. Journal of Molecular Histology, 42 (2):187–193. • Metharom P, Martin K, Kumar AH, Sawhney N, Cronin MF, McCarthy DG, Maguire AR, Caplice NM; (2011) ‘Pleiotropic role for monocyte C-fms protein in response to vascular injury: Potential therapeutic target’. Atherosclerosis, 216 (1):74–82. • O’Sullivan JF, Leblond AL, Kelly G, Kumar AH, Metharom P, Büneker CK, Alizadeh-Vikali N, Hristova I, Hynes BG, O’Connor R, Caplice NM; (2011) ‘Potent long-term cardioprotective effects of single low-dose insulin-like growth factor-1 treatment postmyocardial infarction’. Circulation-Cardiovascular Interventions, 4 (4):327–335.

Centre for Sustainable Livelihoods

Bogue, Joseph

Peer Reviewed Journals • Bleiel, J., Bogue, J. and Troy, Amy-jane (2011) ‘New Product Development for Functional Foods: Focusing on Mega-trends to Increase Consumer Acceptance’. Agro Food Industry Hi-Tech, 22 (5). Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cclvii

Conference Publications • Collins, O. and Bogue, J. (2011) Food choice, acceptability and healthy well-being in ageing populations. Ageing Globally, Ageing Locally Dublin, 2011–11–02- 2011–11–03.

• Onakuse S. Bogue J. and Eamon L (2011) The Links between Indigenous Crop Cultivation and Household Food Security in Kerewan, The Gambia. International Scientiﬁc Conference. • Onakuse, S., Bogue, J. and Lenihan E. (2011) The Links Between Indigenous Crop Cultivation and Household Food Security in Kerewan, The Gambia. Agrarian Perspectives XX Challenges and Opportunities for the Future 2011–09–13- 2011–09–14.

Centre for Uniﬁed Computing

Foley, Simon

• H Zhou and S.N. Foley; (2011) ‘Fast Automatic Security Protocol Generation’. Journal of Computer Security. • S.N. Foley and W.M. Fitzgerald; (2011) ‘Management of Security Policy Conﬁguration using a Semantic Threat Graph Approach’. Journal of Computer Security, 19 (3):567–605.

Conference Publications • K. Feeney, S.N. Foley and R. Brennan; (2011) A Trust Model for Capability Delegation in Federated Policy Systems. 6th IEEE International Conference on Risks and Security of Internet and Systems. • S.N. Foley and S. Abdi; (2011) Avoiding Delegation Subterfuge using Linked Local Permission Names. 8th International Workshop on Formal Aspects of Security and Trust (FAST2011). • S.N. Foley and W Mac Adams; (2011) Trust Management of XMPP Federation. IFIP/IEEE Workshop on Managing Federations and Cooperative Management.

Morrison, John

Peer Reviewed Journals Return to President’s Report • Deepak Ajwani, John Morrison ; (2011) ‘AFlexible workload generator for simulating stream computing systems’. UCC Research Publications 2011–2012 | Research Centres and Institutes cclviii

College of Business and Law

Lynch Fannon, Irene

Book Chapters • Lynch-Fannon, Irene; (2011) ‘Ireland: The Financial Crisis’ In: Hopt (Eds.). Comparative Corporate Governance. Cambridge: Cambridge University Press.

Other Journals • Irene Lynch-Fannon; (2011) ‘Asurvey of Irish Company Law relating to private and public companies in Company Laws of the European Union’ LDGJ Montchrestien.

Unpublished work • Irene Lynch-Fannon; (2011) Corporate Insolvency and Rescue (2nd Edition). • Irene Lynch-Fannon; (2011) Ireland: Cotporate Governance in Hopt, K. (Eds) Comparative Corporate Governance. Cork Constraint Computation Centre

Bridge, Derek

Foley, Simon

Peer Reviewed Journals Return to President’s Report • Carles Martínez-García, Guillermo Navarro-Arribas, Simon N. Foley, Vicenç Torra, Joan Borrell; (2011) ‘Flexible secure inter-domain interoperability through attribute conversion’. Information Sciences, 181 (16):3491–3509. UCC Research Publications 2011–2012 | Research Centres and Institutes cclix

• Fitzgerald, WM; Foley, SN; (2011) ‘Aligning Semantic Web Applications with Network Access Controls’. International Journal on the Development and Application of Standards for Computers, Software, 33 (1). • H Zhou and S.N. Foley; (2011) ‘Fast Automatic Security Protocol Generation’. Journal of Computer Security. • S.N. Foley and W.M. Fitzgerald; (2011) ‘Management of Security Policy Conﬁguration using a Semantic Threat Graph Approach’. Journal of Computer Security, 19 (3):567–605. Conference Publications • K. Feeney, S.N. Foley and R. Brennan; (2011) A Trust Model for Capability Delegation in Federated Policy Systems. 6th IEEE International Conference on Risks and Security of Internet and Systems. • S.N. Foley and S. Abdi; (2011) Avoiding Delegation Subterfuge using Linked Local Permission Names. 8th International Workshop on Formal Aspects of Security and Trust (FAST2011). • S.N. Foley and W Mac Adams; (2011) Trust Management of XMPP Federation. IFIP/IEEE Workshop on Managing Federations and Cooperative Management. Jansen, Thomas

Book Chapters • Thomas Jansen; (2011) ‘Black-Box complexity for bounding the performance of randomized search heuristics’ In: Theory and Principled Methods for the Design of Metaheuristics. Berlin: Springer. • Thomas Jansen; (2011) ‘Simulated Annealing’ In: Anne Auger, Benjamin Doerr (Eds.). Theory of Randomized Search Heuristics. Singapore: World Scientific. Peer Reviewed Journals • Thomas Jansen and Christine Zarges; (2011) ‘Analyzing different variants of immune inspired somatic contiguous hypermutations’. Theoretical Computer Science, 412 (6):517–533. • Thomas Jansen and Christine Zarges; (2011) ‘On Benefits and Drawbacks of Aging Strategies for Randomized Search Heuristics’. Theoretical Computer Science, 412 (6):543–559. • Thomas Jansen and Christine Zarges; (2011) ‘On the role of age diversity for effective aging operators’. Evolutionary Intelligence. Conference Publications • Thomas Jansen and Christine Zarges; (2011) Analysis of evolutionary algorithms: From computational complexity analysis to algorithm engineering. In: Hans-Georg Beyer and William Langdon eds. 11th ACM SIGEVO Workshop on Foundations of Genetic Algorithms (FOGA 2011). • Thomas Jansen and Christine Zarges; (2011) Variation in artificial immune systems: Hypermutations with mutation potential. Proceedings of the 10th International Conference on Artiticial Immune Systems (ICARIS 2011). Return to President’s Report • Thomas Jansen and Pietro S. Oliveto and Christine Zarges; (2011) On the analysis of the immune-inspired B-cell algorithm for the vertex cover problem. Proceedings of the 10th International Conference on Artiticial Immune Systems (ICARIS 2011). UCC Research Publications 2011–2012 | Research Centres and Institutes cclx

O’Sullivan, Barry

Prestwich, Steven David

Peer Reviewed Journals • R. Rossi, S. A. Tarim, B. Hnich, S. Prestwich; (2011) ‘Constraint Programming for Stochastic Inventory Systems under Shortage Cost’. Annals of Operations Research.

• S. D. Prestwich, S. A. Tarim, R. Rossi, B. Hnich; (2011) ‘ANeuroevolutionary Approach to Stochastic Inventory Control in Multi-Echelon Systems’. International Journal of Production Research.

Conference Publications • B. Kawas, M. Laumanns, E. Pratsini, S. Prestwich; (2011) Risk Averse Production Planning. 2nd International Conference on Algorithmic Decision Theory.

• R. Rossi, B. Hnich, S. A. Tarim, S. Prestwich; (2011) Finding (α,ϑ)-solutions via Sampled SCSP. International Joint Conference on Artiﬁcial Intelligence.

• R. Rossi, S. A. Tarim, B. Hnich, S. Prestwich; (2011) Solving the Newsvendor Problem under Partial Demand Information. 12th Congres Annuel de la Societe Francaise de Recherche Operationnelle et d’Aide a la Decision (ROADEF).

Provan, Gregory

Conference Publications • Alie El-Din Mady, Gregory M. Provan, Conor Ryan and Kenneth N. Brown; (2011) Stochastic Model Predictive Controller for the Integration of Building Use and Temperature Regulation. Conference of Association for the Advancement of Artiﬁcial Intelligence (AAAI) San Francisco, CA, USA, 2011–08–07- 2011–08–11.

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cclxi

Cork Neuroscience Group

Boylan, Geraldine

• Walsh BH, Boylan GB, Murray DM; (2011) ‘Nucleated Red Blood Cells and early EEG: Predicting Sarnat stage and two year outcome’. Early Human Development.

Dinan, Ted

Peer Reviewed Journals • Bravo, JA,Dinan, TG,Cryan, JF; (2011) ‘Alterations in the central CRF system of two different rat models of comorbid depression and functional gastrointestinal disorders’. International Journal of Neuropsychopharmacology, 14:666–683. • Bravo, JA,Forsythe, P,Chew, MV,Escaravage, E,Savignac, HM,Dinan, TG,Bienenstock, J,Cryan, JF; (2011) ‘Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve’. Proceedings of The National Academy of Science Usa, 108:16050–16055. • Browne CA, Clarke G, Dinan TG, Cryan JF; (2011) ‘Differential stress-induced alterations in tryptophan hydroxylase activity and serotonin turnover in two inbred mouse strains’. Neuropharmacology, 60 (4):683–691. • Claesson, M. J.,Cusack, S.,O’Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, A.P.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O’Connor, M.,Harnedy, N.,O’Connor, K.,Henry, C.,O’Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O’Toole, P. W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings of The National Acadamy of Sciences, 108 Suppl 1:4586–914586. • Dinan TG, Quigley EM (2011) ‘Probiotics in the treatment of depression: science or science ﬁction?’. The Australian and New Zealand Journal of Psychiatry, 45 (12):1023–1025. • Finger BC, Dinan TG, Cryan JF (2011) ‘Behavioral satiety sequence in a genetic mouse model of obesity: effects of ghrelin receptor ligands’. Behavioural Pharmacology, 22 (7):624–632. • Finger, BC,Dinan, TG,Cryan, JF (2011) ‘High-Fat Diet Selectively Protects Against The Effects Of Chronic Social Stress In The Mouse’. Neuroscience, 192:351–360. • Finger, BC,Dinan, TG,Cryan, JF; (2011) ‘Behavioral satiety sequence in a genetic mouse model of obesity: effects of ghrelin receptor ligands’. Behavioural Pharmacology, 22:624–632. • Finger, BC,Schellekens, H,Dinan, TG,Cryan, JF; (2011) ‘Is there altered sensitivity to ghrelin-receptor ligands in leptin-deﬁcient mice?: importance of satiety state and time of day’. Psychopharmacology, 216:421–429. • Julio-Pieper M, Flor PJ, Dinan TG, Cryan JF; (2011) ‘Exciting Times beyond the Brain: Metabotropic Glutamate Receptors in Peripheral and Non-Neural Tissues’. Pharmacological reviews. Return to President’s Report • Kennedy, P.J., G. Clarke, G., Quigley, E.M.M., Groeger., J.A., Dinan., T.G., Cryan. J.F. ; (2011) ‘Gut Memories: Towards a Cognitive Neurobiology of Irritable Bowel Syndrome’. Neuroscience and Biobehavioral Reviews. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxiii

• McKernan, DP,Gaszner, G,Quigley, EM,Cryan, JF,Dinan, TG; (2011) ‘Altered peripheral toll-like receptor responses in the irritable bowel syndrome’. Alimentary Pharmacology & Therapeutics, 33:1045–1052. • O’Brien FE, Dinan TG, Griffin BT, Cryan JF; (2011) ‘Interactions between antidepressants and P-glycoprotein at the blood-brain barrier: Clinical significance of in vitro and in vivo findings’. British Journal of Pharmacology. • O’Mahony, CM,Clarke, G,Gibney, S,Dinan, TG,Cryan, JF; (2011) ‘Strain differences in the neurochemical response to chronic restraint stress in the rat: Relevance to depression’. Chemistry (Weinheim An Der Bergstrasse, Germany), 97:690–699. • O’Mahony, SM,Coelho, AM,Fitzgerald, P,Lee, K,Winchester, W,Dinan, TG,Cryan, JF; (2011) ‘The effects of gabapentin in two animal models of co-morbid anxiety and visceral hypersensitivity’. European Journal of Pharmacology, 667:169–174. • O’Malley, D,Dinan, TG,Cryan, JF; (2011) ‘Altered expression and secretion of colonic Interleukin-6 in a stress-sensitive animal model of brain-gut axis dysfunction’. The Journal of Immunology, 235:48–55. • O’Sullivan E, Barrett E, Grenham S, Fitzgerald P, Stanton C, Ross RP, Quigley EM, Cryan JF, Dinan TG (2011) ‘BDNF expression in the hippocampus of maternally separated rats: does Bifidobacterium breve 6330 alter BDNF levels?’. Beneficial microbes, 2 (3):199–207. • O’Tuathaigh CM, Clarke G, Walsh J, Desbonnet L, Petit E, O’Leary C, Tighe O, Clarke N, Karayiorgou M, Gogos JA, Dinan TG, Cryan JF, Waddington JL (2011) ‘Genetic vs. pharmacological inactivation of COMT influences cannabinoid-induced expression of schizophrenia-related phenotypes’. International Journal of Neuropsychopharmacology, :1–12. • Savignac HM, Finger BC, Pizzo RC, O’Leary OF, Dinan TG, Cryan JF; (2011) ‘Increased sensitivity to the effects of chronic social defeat stress in an innately anxious mouse strain’. Neuroscience, 192:524–536. • Savignac, HM,Finger, BC,Pizzo, RC,O’Leary, OF,Dinan, TG,Cryan, JF (2011) ‘Increased Sensitivity To The Effects Of Chronic Social Defeat Stress In An Innately Anxious Mouse Strain’. Neuroscience, 192:524–536. • Tramullas M, Dinan TG, Cryan JF (2011) ‘Chronic psychosocial stress induces visceral hyperalgesia in mice’. Stress (Amsterdam, Netherlands).

Conference Publications • O’Leary OF, Zandy S, Dinan TG and Cryan JF; (2011) Increased hippocampal cell proliferation as a molecular mechanism for the therapeutic efﬁcacy of adjunctive lithium therapy in treatment-resistant depression. The International College of Neuropsychopharmacology (CINP) thematic meeting: Polypharmacy: The Good, The Bad and The Ugly, Salzburg, Austria. • O’Leary OF, Zandy S, Dinan TG, Cryan JF; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases adult hippocampal neurogenesis in a mouse model of treatment resistance. Anxiety and Depression, 21st Neuropharmacology Conference, Virginia, USA. • O’Leary OF, Zandy S, Dinan TG, and Cryan JF ; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases hippocampal neurogenesis in a model of treatment-resistant depression. European Behavioural Pharmacology society, Amsterdam. • O’Leary OF, Zandy S, Dinan TG, and Cryan JF; (2011) Increased hippocampal cell proliferation as a molecular mechanism for the therapeutic efﬁcacy of adjunctive lithium therapy in treatment-resistant depression. Wiring the brain: Making connections, Wicklow, Ireland. Return to President’s Report • O’Mahony E, O’Leary OF, McKernan DP, O’Malley D, Dinan TG and Cryan JF ; (2011) Investigation of glycogen synthase kinase-3 as a biomarker of schizophrenia and early-life stress. Health Research Board Watts Medal Competition. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxiv

Cryptography

Marnane, William

• English, T,Popovici, E,Keller, M,Marnane, WP; (2011) ‘Network-on-Chip interconnect for pairing-based cryptographic IP cores’. Journal of Systems Architecture, 57:95–108.

• Temko A., Lightbody G., Boylan G., Marnane W.P., (2011) Online EEG Channel Weighting for Detection of Seizures in the Neonate. 33rd Annual International IEEE EMBS Conference Boston, MA, USA, 2011–08–30- 2011–09–03. • Temko A., Marnane W.P., Boylan G., Lightbody G., (2011) A Data-Driven Energy Based Estimator of EEG Channel Importance for Improved Patient-Adaptive Neonatal Seizure Detector. 18th IFAC World Congress Milan, Italy, 2011–08–28- 2011–09–02. • Twomey N., Temko A., O’B Hourihane J., Marnane W.P., (2011) Allergy detection with statistical modelling of HRV-based non-reaction baseline features. 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies (ISABEL 2011) Barcelona, Spain, 2011–10–26- 2011–10–29. Popovici, Emanuel

Marnane, William

Book Chapters • Thomas, E.M., Temko, A., Lightbody, G., Marnane, W.P. and Boylan, G.B; (2011) ‘Advances in automated neonatal seizure detection’ In: Editor-in-Chief: J. Kacprzyk, Edited by A. Ruano and A. Varkonyi-Koczy (Eds.). New Advances in Intelligent Signal Processing. Germany: Springer-Verlag. Peer Reviewed Journals • Andriy. Temko, Climent Nadeu, William Marnane, Geraldine Boylan, and Gordon Lightbody; (2011) ‘EEG Signal Description with Spectral-Envelope Based Speech Recognition Features for Detection of Neonatal Seizures’. IEEE Transactions on Information Technology in Biomedicine. • English, T,Popovici, E,Keller, M,Marnane, WP; (2011) ‘Network-on-Chip interconnect for pairing-based cryptographic IP cores’. Journal of Systems Architecture, 57:95–108. • Hanley, N,Tunstall, M,Marnane, WP; (2011) ‘Using templates to distinguish multiplications from squaring operations’. International Journal of Information Security, 10 (4):255–266. • Temko A., Thomas E.M., Marnane W.P., Lightbody G., Boylan, G. (2011) ‘Neonatal Seizure Detection with Support Vector Machines’. Clinical Neurophysiology, 122 (3):464–473. Return to President’s Report • Temko A., Thomas E.M., Marnane W.P., Lightbody G., Boylan, G. (2011) ‘Performance Assessment for Neonatal Seizure Detectors’. Clinical Neurophysiology. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxvi

Conference Publications • Gutiérrez R., García J.J., García J.C., Marnane W.P., Gualda D., Fernández S., Garcia E. (2011) Activity Monitoring and Emergency Warning with Location Information of the user. 7th International Symposium on Intelligent Signal Processing (WISP 2011) Floriana, Malta, 2011–09–19- 2011–09–21. • Hamilton M., Tisserand A., Marnane W.P. (2011) A Comparison on FPGA of Modular Multipliers Suitable for Elliptic Curve Cryptography over GF(p) for Speciﬁc p Values. 21st International Conference on Field Programmable Logic and Applications (FPL 2011) Chania, Crete, Greece, 2011–09–05- 2011–09–07. • Kelleher D., Temko A., O’Regan S., Nash D., McNamara B., Costello D., Marnane W.P., (2011) Parallel Artefact Rejection for Epileptiform Activity Detection in Routine EEG 33rd Annual International IEEE EMBS Conference Boston, MA, USA, 2011–08–30- 2011–09–03. • Pan W., Marnane W.P., (2011) A Correlation Power Analysis attack against Tate pairing on FPGA. In: Andreas Koch, Ram Krishnamurthy, John McAllister, Roger Woods and Tarek El-Ghazawi eds. 7th International Symposium on Applied Reconﬁgurable Computing, Lecture Notes in Computer Science 6578 Belfast, Northern Ireland, 2011–03–23- 2011–03–25. • Temko A., Lightbody G., Boylan G., Marnane W.P., (2011) Online EEG Channel Weighting for Detection of Seizures in the Neonate. 33rd Annual International IEEE EMBS Conference Boston, MA, USA, 2011–08–30- 2011–09–03. • Temko A., Marnane W.P., Boylan G., Lightbody G., (2011) A Data-Driven Energy Based Estimator of EEG Channel Importance for Improved Patient-Adaptive Neonatal Seizure Detector. 18th IFAC World Congress Milan, Italy, 2011–08–28- 2011–09–02. • Twomey N., Temko A., O’B Hourihane J., Marnane W.P., (2011) Allergy detection with statistical modelling of HRV-based non-reaction baseline features. 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies (ISABEL 2011) Barcelona, Spain, 2011–10–26- 2011–10–29.

Popovici, Emanuel

Eldermet

Dinan, Ted

Peer Reviewed Journals Return to President’s Report • Bravo, JA,Dinan, TG,Cryan, JF; (2011) ‘Alterations in the central CRF system of two different rat models of comorbid depression and functional gastrointestinal disorders’. International Journal of Neuropsychopharmacology, 14:666–683. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxvii

• O’Mahony, SM,Coelho, AM,Fitzgerald, P,Lee, K,Winchester, W,Dinan, TG,Cryan, JF; (2011) ‘The effects of gabapentin in two animal models of Return to co-morbid anxiety and visceral hypersensitivity’. European Journal of Pharmacology, 667:169–174. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cclxviii

• O’Malley, D,Dinan, TG,Cryan, JF; (2011) ‘Altered expression and secretion of colonic Interleukin-6 in a stress-sensitive animal model of brain-gut axis dysfunction’. The Journal of Immunology, 235:48–55. • O’Sullivan E, Barrett E, Grenham S, Fitzgerald P, Stanton C, Ross RP, Quigley EM, Cryan JF, Dinan TG (2011) ‘BDNF expression in the hippocampus of maternally separated rats: does Bifidobacterium breve 6330 alter BDNF levels?’. Beneficial microbes, 2 (3):199–207. • O’Tuathaigh CM, Clarke G, Walsh J, Desbonnet L, Petit E, O’Leary C, Tighe O, Clarke N, Karayiorgou M, Gogos JA, Dinan TG, Cryan JF, Waddington JL (2011) ‘Genetic vs. pharmacological inactivation of COMT influences cannabinoid-induced expression of schizophrenia-related phenotypes’. International Journal of Neuropsychopharmacology, :1–12. • Savignac HM, Finger BC, Pizzo RC, O’Leary OF, Dinan TG, Cryan JF; (2011) ‘Increased sensitivity to the effects of chronic social defeat stress in an innately anxious mouse strain’. Neuroscience, 192:524–536. • Savignac, HM,Finger, BC,Pizzo, RC,O’Leary, OF,Dinan, TG,Cryan, JF (2011) ‘Increased Sensitivity To The Effects Of Chronic Social Defeat Stress In An Innately Anxious Mouse Strain’. Neuroscience, 192:524–536.

• Tramullas M, Dinan TG, Cryan JF (2011) ‘Chronic psychosocial stress induces visceral hyperalgesia in mice’. Stress (Amsterdam, Netherlands).

• O’Leary OF, Zandy S, Dinan TG, Cryan JF; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases adult hippocampal neurogenesis in a mouse model of treatment resistance. Anxiety and Depression, 21st Neuropharmacology Conference, Virginia, USA.

• O’Leary OF, Zandy S, Dinan TG, and Cryan JF ; (2011) Adjunctive lithium treatment has antidepressant-like behavioural effects and increases hippocampal neurogenesis in a model of treatment-resistant depression. European Behavioural Pharmacology society, Amsterdam. • O’Leary OF, Zandy S, Dinan TG, and Cryan JF; (2011) Increased hippocampal cell proliferation as a molecular mechanism for the therapeutic efﬁcacy of adjunctive lithium therapy in treatment-resistant depression. Wiring the brain: Making connections, Wicklow, Ireland. • O’Mahony E, O’Leary OF, McKernan DP, O’Malley D, Dinan TG and Cryan JF ; (2011) Investigation of glycogen synthase kinase-3 as a biomarker of schizophrenia and early-life stress. Health Research Board, Watts Medal Competition.

Fitzgerald, Gerald F.

Peer Reviewed Journals • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Arole for proline synthesis and transport in Listeria monocytogenes barotolerance’. Journal of Applied Microbiology, 110:1187–1194. Return to • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Novel listerial genetic loci conferring enhanced barotolerance in Escherichia coli’. President’s Report Journal of Applied Microbiology, 110:618–630. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxix

• Kearney, N,Stack, HM,Tobin, JT,Chaurin, V,Fenelon, MA,Fitzgerald, GF,Ross, RP,Stanton, C; (2011) ‘Lactobacillus paracasei NFBC 338 producing recombinant beta-glucan positively inﬂuences the functional properties of yoghurt’. Rna-A Publication of The Rna Society, 21:561–567.

• Mills, S. and Ross, R. P. and Hill, C. and Fitzgerald, G. F. and Stanton, C.; (2011) ‘Milk intelligence: Mining milk for bioactive substances associated with human health’. International Dairy Journal, 21 (6):377–401.

• Norberg, S,O’Connor, PM,Stanton, C,Ross, RP,Hill, C,Fitzgerald, GF,Cotter, PD; (2011) ‘Altering the Composition of Caseicins A and B as a Means of Determining the Contribution of Specific Residues to Antimicrobial Activity’. Applied and Environmental Microbiology, 77:2496–2501. • Pokusaeva, K,O’Connell-Motherway, M,Zomer, A,MacSharry, J,Fitzgerald, GF,van Sinderen, D; (2011) ‘Cellodextrin Utilization by Bifidobacterium breve UCC2003’. Applied and Environmental Microbiology, 77:1681–1690. • Rosberg-Cody, E,Liavonchanka, A,Gobel, C,Ross, RP,O’Sullivan, O,Fitzgerald, GF,Feussner, I,Stanton, C; (2011) ‘Myosin-cross-reactive antigen (MCRA) protein from Bifidobacterium breve is a FAD-dependent fatty acid hydratase which has a function in stress protection’. Chemistry (Weinheim An Der Bergstrasse, Germany), 12. • Rosberg-Cody, E,Stanton, C,O’Mahony, L,Wall, R,Shanahan, F,Quigley, EM,Fitzgerald, GF,Ross, RP; (2011) ‘Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice’. Microbiology-SGM, 157:609–615. • Russell, DA,Ross, RP,Fitzgerald, GF,Stanton, C; (2011) ‘Metabolic activities and probiotic potential of bifidobacteria’. International Journal of Food Microbiology, 149:88–105.

Fitzgerald, Tony

Peer Reviewed Journals • Cashman KD, Fitzgerald AP, Viljakainen HT, Jakobsen J, Michaelsen KF, Lamberg-Allardt C, Mlgaard C; (2011) ‘Estimation of the dietary requirement for vitamin D in healthy adolescent white girls’. The American Journal of Clinical Nutrition, 93 (3):549–555. Return to • Cashman, K. D.,Fitzgerald, A. P.,Kiely, M.,Seamans, K. M. (2011) ‘Asystematic review and meta-regression analysis of the vitamin D intake-serum President’s Report 25-hydroxyvitamin D relationship to inform European recommendations’. British Journal of Nutrition. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxx

Book Chapters • Flynn, A.; (2011) ‘Galactosemia’ In: Encyclopedia of Dairy Sciences. San Diego: Academic Press. Peer Reviewed Journals • Flynn, A.; (2011) ‘Scientiﬁc substantiation of health claims in the EU’.Proceedings of the Nutrition Society, 70:1–7. • L.J. Black, J. Ireland, A. Mller, M. Roe, J. Walton, A. Flynn, P.M. Finglas, M. Kiely; (2011) ‘Development of an on-line Irish food composition database for nutrients’. Journal of Food Composition and Analysis. • McKenna G, Allen PF, O’Mahony D, Flynn A, DaMata C, Cronin M, Woods N; (2011) ‘Impact of tooth replacement strategies on the nutritional status of partially dentate elders’. Gerodontology. • O’Sullivan, A,Gibney, MJ,Connor, AO,Mion, B,Kaluskar, S,Cashman, KD,Flynn, A,Shanahan, F,Brennan, L; (2011) ‘Biochemical and metabolomic phenotyping in the identiﬁcation of a vitamin D responsive metabotype for markers of the metabolic syndrome’. Molecular Nutrition and Food Research, 55:679–690. Return to President’s Report • Tlustos, C., Sheridan, M., O’Sullivan, D., Anderson, W., Flynn, A. ; (2011) ‘The dioxin contamination incident in Ireland, 2008: analytical results and congener patterns’. Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Amp; Risk Assessment, 28:1–11. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxi

Hill, Colin

Peer Reviewed Journals • Casey PG, Hill C, Gahan CG (2011) ‘E. coli O104:H4 social media and the characterization of an emerging pathogen’. Bioengineered Bugs, 2 (3):189–193.

• Claesson, Marcus J. and Cusack, Siobhan and O’Sullivan, Orla and Greene-Diniz, Rachel and de Weerd, Heleen and Flannery, Edel and Marchesi, Julian R. and Falush, Daniel and Dinan, Timothy and Fitzgerald, Gerald and Stanton, Catherine and van Sinderen, Douwe and O’Connor, Michael and Harnedy, Norma and O’Connor, Kieran and Henry, Colm and O’Mahony, Denis and Fitzgerald, Anthony P. and Shanahan, Fergus and Twomey, Cillian and Hill, Colin and Ross, R. Paul and O’Toole, Paul W.; (2011) ‘Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proceedings Of The National Academy Of Sciences Of The United States Of America, 108 (Suppl. 1):4586–4591. • Clayton, EM,Hill, C,Cotter, PD,Ross, RP; (2011) ‘Real-Time PCR Assay To Differentiate Listeriolysin S-Positive and -Negative Strains of Listeria monocytogenes’. Applied and Environmental Microbiology, 77:163–171.

• Collins, B,Cotter, PD,Hill, C,Ross, RP; (2011) ‘The impact of nisin on sensitive and resistant mutants of Listeria monocytogenes in cottage cheese’. Journal of Applied Microbiology, 110:1509–1514.

• Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Arole for proline synthesis and transport in Listeria monocytogenes barotolerance’. Journal of Applied Microbiology, 110:1187–1194. • Considine, KM,Sleator, RD,Kelly, AL,Fitzgerald, GF,Hill, C; (2011) ‘Novel listerial genetic loci conferring enhanced barotolerance in Escherichia coli’. Journal of Applied Microbiology, 110:618–630. • Davey, MS,Lin, CY,Roberts, GW,Heuston, S,Brown, AC,Chess, JA,Toleman, MA,Gahan, CGM,Hill, C,Parish, T,Williams, JD,Davies, SJ,Johnson, DW,Topley, N,Moser, B,Eberl, M; (2011) ‘Human Neutrophil Clearance of Bacterial Pathogens Triggers Anti-Microbial gamma delta T Cell Responses in Early Infection’. Plos Pathogens, 7. • Dobson, A,Crispie, F,Rea, MC,O’Sullivan, O,Casey, PG,Lawlor, PG,Cotter, PD,Ross, P,Gardiner, GE,Hill, C; (2011) ‘Fate and efficacy of lacticin 3147-producing Lactococcus lactis in the mammalian gastrointestinal tract’. Fems Microbiology Ecology, 76:602–614. • Dobson, A,O’Sullivan, O,Cotter, PD,Ross, P,Hill, C; (2011) ‘High-throughput sequence-based analysis of the bacterial composition of kefir and an associated kefir grain’. Fems Microbiology Letters, 320:56–62.

• Dowd GC, Casey PG, Begley M, Hill C, Gahan CG (2011) ‘Investigation of the role of ZurR in the physiology and pathogenesis of Listeria monocytogenes’. Fems Microbiology Letters.

Return to • Dowd, GC,Joyce, SA,Hill, C,Gahan, CGM; (2011) ‘Investigation of the Mechanisms by Which Listeria monocytogenes Grows in Porcine President’s Report Gallbladder Bile’. Infection and Immunity, 79:369–379. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxii

O’Mahony, Denis

Book Chapters • D O’Mahony, PF Gallagher; (2011) ‘Medication Review and Evidence-based Prescribing’ In: Oxford Desk Reference in Geriatric Medicine. Oxford, UK: Oxford University Press.

O’Toole, Paul

Shanahan, Fergus

• Brint, EK,MacSharry, J,Fanning, A,Shanahan, F,Quigley, EMM; (2011) ‘Differential Expression of Toll-Like Receptors in Patients With Irritable Bowel Syndrome’. Rna-A Publication of The Rna Society, 106:329–336.

• Crush L, O’Connor OJ, Plant W, Clarkson MR, Shanahan F, Maher MM; (2011) ‘Perplexing plain abdominal x-ray’. Gut, 60 (2). • O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston Return to AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional President’s Report genome analysis of Biﬁdobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxiv

• O’Neill SB, O’Connor OJ, McWilliams SR, Shanahan F, Maher MM; (2011) ‘Minimization of radiation exposure due to computed tomography in inflammatory bowel disease’. Clinics and research in hepatology and gastroenterology. • O’Sullivan, A,Gibney, MJ,Connor, AO,Mion, B,Kaluskar, S,Cashman, KD,Flynn, A,Shanahan, F,Brennan, L; (2011) ‘Biochemical and metabolomic phenotyping in the identification of a vitamin D responsive metabotype for markers of the metabolic syndrome’. Molecular Nutrition and Food Research, 55:679–690. • Pruteanu, M,Hyland, NP,Clarke, DJ,Kiely, B,Shanahan, F; (2011) ‘Degradation of the Extracellular Matrix Components by Bacterial-derived Metalloproteases: Implications for Inflammatory Bowel Diseases’. Inflammatory Bowel Diseases, 17:1189–1200. • Rea, MC,Dobson, A,O’Sullivan, O,Crispie, F,Fouhy, F,Cotter, PD,Shanahan, F,Kiely, B,Hill, C,Ross, RP; (2011) ‘Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon’. Proceedings of the National Academy of Sciences of the United States of America, 108:4639–4644. • Rosberg-Cody, E,Stanton, C,O’Mahony, L,Wall, R,Shanahan, F,Quigley, EM,Fitzgerald, GF,Ross, RP; (2011) ‘Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice’. Microbiology-SGM, 157:609–615.

Other • Rampton, DS,Shanahan, F (2011) Increased health burden associated with Clostridium difﬁcile diarrhoea in inﬂammatory bowel disease. Other.

Van Sinderen, Douwe

• Cronin, M,Ventura, M,Fitzgerald, GF,van Sinderen, D; (2011) ‘Progress in genomics, metabolism and biotechnology of biﬁdobacteria’. International Journal of Food Microbiology, 149:4–18.

Return to • Douillard, FP,O’Connell-Motherway, M,Cambillau, C,van Sinderen, D; (2011) ‘Expanding the molecular toolbox for Lactococcus lactis: President’s Report construction of an inducible thioredoxin gene fusion expression system’. Microbial Cell Factories, 10. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxv

• Guinane, CM,Barrett, E,Fitzgerald, GF,van Sinderen, D,Ross, RP,Stanton, C (2011) ‘Genome Sequence of Bifidobacterium breve DPC 6330, a Strain Isolated from the Human Intestine’. Journal of Bacteriology, 193:6799–6800. • O’Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O’Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O’Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O’Toole PW, van Sinderen D (2011) ‘Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor’. Proceedings of The National Academy of Sciences of The United States of America, 108 (27):11217–11222. • Pokusaeva, K,O’Connell-Motherway, M,Zomer, A,MacSharry, J,Fitzgerald, GF,van Sinderen, D; (2011) ‘Cellodextrin Utilization by Bifidobacterium breve UCC2003’. Applied and Environmental Microbiology, 77:1681–1690. Environmental Research Institute

Achtman, Mark

Burnell, Gavin

Chapman, Deborah

Peer Reviewed Journals Return to President’s Report • Bacci, Fabio and Chapman, Deborah V. (2011) ‘Microbiological assessment of private drinking water supplies in Co Cork, Ireland’. Jnl. Water and Health, 09.4:738–751. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxvi

• Grace M. Cott, Marcel A. K. Jansen and Deborah V. Chapman. ; (2011) ‘Salt Marshes on Peat Substrate: Where Blanket Bogs Encounter the Marine Environment’. Journal of Coastal Research. Other Journals • Cott, G., Reidy, D., Chapman D.V. and Jansen, M.A.K; (2011) ‘Saltmarshes on peat substrate on the southwest coast of Ireland: edaphic parameters and plant species distribution’ Geo-Eco-Marina. • Lettice, S., Jansen, M.A.K. and Chapman, D.V. ; (2011) ‘Differential decomposition patterns of marine and terrestrial biomass in a coastal lagoon’ Geo-Eco-Marina. Cross, Thomas

Peer Reviewed Journals • Carlsson, J,Shephard, S,Coughlan, J,Trueman, CN,Rogan, E,Cross, TF; (2011) ‘Fine-scale population structure in a deep-sea teleost (orange roughy, Hoplostethus atlanticus)’. Deep-Sea Research Part I-Oceanographic Research Papers, 58:627–636. • L. Mirimin, R. Miller, E. Dillane, S. D. Berrow, S. Ingram, T. F. Cross & E. Rogan; (2011) ‘Fine-scale population genetic structuring of bottlenose’. Animal Conservation. • Lyons, L.J., O’Riordan, R.M., Cross, T.F. and Culloty, S.C.; (2011) ‘Reproductive biology of the shore crab Carcinus maenas (decapoda: Portunidae): a macroscopic and histological view’. Invertebrate Reproduction and Development. Culloty, Sarah

Peer Reviewed Journals • Fermer, J., Culloty, S.C., Kelly, T.C. and O’Riordan, R.M.; (2011) ‘Parasitological survey of the edible cockle Cerastoderma edule (Bivalvia) on the south coast of Ireland’. Journal of the Marine Biological Association of the United Kingdom, 91 (4):923–928. • Fermer, J; Culloty, SC; Kelly, TC; O’Riordan, RM; (2011) ‘Manipulation of Cerastoderma edule burrowing ability by Meiogymnophallus minutus metacercariae’. Journal of The Marine Biological Association of The United Kingdom, 91 (4):907–911. • Lyons, L.J., O’Riordan, R.M., Cross, T.F. and Culloty, S.C.; (2011) ‘Reproductive biology of the shore crab Carcinus maenas (decapoda: Portunidae): a macroscopic and histological view’. Invertebrate Reproduction and Development. • Maloy, AP; Culloty, SC; Bolton-Warberg, M; Fitzgerald, R; Slater, JW; (2011) ‘Molecular identification of laser dissected gut contents from hatchery realred larval cod, Gadus morhua: a new approach to diet analysis’. Aquaculture Nutrition, 17:536–541. • McCarthy, M; Culloty, SC; (2011) ‘Optomisation of two immunofluorescent antibodies for the detection of Escherichia coli using immunofluorescent microscopy and flow cytometry’. Current Microbiology, 62 (2):402–408. • Morgan, E., Kelly, T., O’Riordan, R.M. and Culloty, S.C. (2011) ‘The influence of disseminated neoplasia, trematode infections and gametogenesis on surfacing and mortality in the cockle, Cerastoderma edule’. Diseases of Aquatic Organisms. Return to President’s Report • Prinz, K; Kelly, TC; O’Riordan, RM; Culloty, SC; (2011) ‘Factors influencing cercarial emergence and settlement in the digenean trematode Parorchis acanthus (Philophthalmidae)’. Journal of The Marine Biological Association of The United Kingdom, 91 (8):1673–1679. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxvii

• Maloy AP, Culloty SC, Slater JW; (2011) DNA-based dietary analysis of wild bivalve larvae. Annual meeting of the National Shellﬁsheries Association.

Dobson, Alan

Book Chapters • Abbas, A., Dobson, A.D.W. (2011) ‘Penicillium roquefortii’ In: Encyclopedia of Dairy Sciences, 2nd Edition. New York: Academic Press. • Abbas, A., Dobson, A.D.W. (2011) ‘Penicillium camembertii’ In: Encyclopedia of Dairy Sciences, 2nd Edition. New York: Academic Press.

• Dobson ADW (2011) ‘Aspergillus ﬂavus’ In: Encyclopedia of Dairy Sciences, 2nd Edition. New York: Academic Press. • Kabat, B., Dobson, A.D.W. (2011) ‘Toxigenic fungi and mycotoxins’ In: Nutritional Insights and Food Safety. New York: Nova Science.

• Lejon, D.P.H., Kennedy, J. and Dobson, A.D.W. (2011) ‘Identiﬁcation of novel bioactive compounds from the metagenome of the marine sponge Haliclona simulans’ In: Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. New Jersey: Wiley-Blackwell.

Peer Reviewed Journals • Flemer B, Kennedy J, Margassery LM, Morrissey JP, O’Gara F, Dobson AD. (2011) ‘Diversity and antimicrobial activities of microbes from two Irish marine sponges, Suberites carnosus and Leucosolenia sp’. Journal of applied microbiology.

• Kabat, B. and Dobson, A.D.W. (2011) ‘Anintroduction to the traditional fermented foods and beverages of Turkey’. Critical Reviews in Food Science and Nutrition, 51 (3):248–260.

• Kennedy, J., O’Leary, N., Kiran, S., Morrissey, J., O’Gara, F., Selvin, J. and Dobson, A.D.W. (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications’. Journal of applied microbiology, 111:787–799. • Kennedy, J., O’Leary, N.D., Kiran, G.S., Morrissey, J.P., O’Gara, F., Selvin, J., and Dobson, A.D.W.; (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems’. Journal of applied microbiology, 111 (4):787–799. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Ahigh-throughput screen to identify novel calcineurin inhibitors’. Journal of Microbiological Methods. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Diversity and anti-microbial activity of bacteria from the coastal marine sponges Amphilectus fucorum and Eurypon major’. Letters In Applied Microbiology. Return to President’s Report • O’ Halloran, J.A., Barbosa, T.M., Morrissey, J.P., Kennedy, J., O’Gara, F., and Dobson, A.D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. Journal of applied microbiology, 110 (6):1495–1508. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxviii

• O’Leary, N., O’Mahony, M.M. and Dobson, A.D.W. (2011) ‘Regulation of phenylacetic acid assimilation is sigma 54 dependent in Pseudomonas putida CA-3’. BMC Microbiology, 11. • Phelan RW, O’ Halloran JA, Kennedy J, Morrissey JP, Dobson AD, O’Gara F, Barbosa TM. (2011) ‘Diversity and bioactive potential of endospore-forming bacteria cultured from the marine sponge Haliclona simulans’. Journal of applied microbiology. • Phelan, R.W., Clarke, C., Barbosa, T., Morrissey, J.P., Dobson, A.D.W. and O’Gara, F. ; (2011) ‘Atetracycline resistance encoding plasmid from a Bacillus sp. strain isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77:327–329.

Doyle, Thomas

Peer Reviewed Journals • Bastian, T., Stokes, D, Kelleher, J.E., Hays, G.C., Davenport, J., Doyle, T.K.; (2011) ‘Fisheries bycatch data provide insights into the distribution of the mauve stinger (Pelagia noctiluca) around Ireland’. ICES Journal of Marine Science. • C. P. Lynam, M. K. S. Lilley, T. Bastian, T. K. Doyle, S. E. Beggs and G. C. Hays; (2011) ‘Have jellyfish in the Irish Sea benefited from climate change and overfishing?’. Global Change Biology, 17:767–782.

Harrison, Simon

Higgs, Kenneth

Holmes, Justin D.

Peer Reviewed Journals Return to • Arnold, D. C.; Blake, A.; Iacopino, D.; Tobin, J. M.; O’Mahony, C.; Holmes, J. D.; Morris, M. A. ; (2011) ‘Planarized and nanopatterned mesoporous President’s Report silica thin ﬁlms by chemical mechanical polishing of gap-ﬁlled topographically patterned substrates’. Ieee Transactions On Nanotechnology, 10:451–461. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxix

• Borah, D.; Shaw, M. T.; Rasappa, S.; Farrell, R. A.; O’Mahony, C.; Faulkner, C. M.; Bosea, M.; Gleeson, P.; Holmes, J. D.; Morris, M. A.; (2011) ‘Plasma etch technologies for the development of ultra-small feature size transistor devices’. Journal of Physics D: Applied Physics, 44:174012(1)-144012(12). • Burke, D. M.; O’Byrne, J.; Fleming, P. G.; Borah, D.; Morris, M. A.; Holmes, J. D.; (2011) ‘Carbon nanocages as heavy metal ion adsorbents’. Desalination, 280:87–94. • Chen, L.; Holmes, J. D.; Ramírez-García, S.; Morris, M. A. ; (2011) ‘Facile synthesis of monodisperse ZnO nanocrystals by direct liquid phase precipitation’. Journal of Nanomaterials, 2011:853832(1)-853832(9). • Chen, L.; Xu, J.; Zhang, W.-H.; Holmes, J. D.; Morris, M. A.; (2011) ‘Syntheses of complex mesoporous silicas using mixtures of nonionic block copolymer surfactants: Understanding formation of different structures using solubility parameters’. Journal of Colloid and Interface Science, 353:169–180. • Collins, G. Holmes, J. D.; (2011) ‘Chemical functionalisation of silicon and germanium nanowires’. Journal of Materials Chemistry, 21:11052–11069.

• Collins, G.; Fleming. P.; O’Dwyer, C.; Morris, M. A.; Holmes, J. D.; (2011) ‘Organic functionalization of germanium nanowires using arenediazonium salts’. Chemistry of Materials, 23:1883–1891. • Delaney, P.; McManamon, C.; Hanrahan, J. P.; Copley, M. P.; Holmes, J. D.; Morris, M. A.; (2011) ‘Development of chemically engineered porous metal oxides for phosphate removal’. Journal of Hazardous Materials, 185:382–391. • Donegan, K. P.; Godsell, J. F.; Tobin, J. M.; O’Byrne, J. P.; Otway, D. J.; Morris, M. A.; Roy, S.; Holmes, J. D.; (2011) ‘Microwave-assisted synthesis of icosahedral nickel nanocrystals’. CrystEngComm, 3:2023–2028. • Farrell, R. A.; Kehagias, N.; Shaw, M. T.; Reboud, V.; Zelsmann, M.; Holmes, J. D.; Sotomayor-Torres, Morris, M. A.; (2011) ‘Surface-directed dewetting of a block copolymer for fabricating highly uniform nanostructured microdroplets and concentric nanorings’. Acs Nano, 5:1073–1085.

• Fleming, P. G.; Holmes, J. D.; Otway, D. J.; Morris, M. A.; (2011) ‘The complex synthesis and solid state chemistry of ceria-lanthana solid solutions prepared via a hexamethylenetetramine precipitation’. Journal of Solid State Chemistry, 184:2595–2600.

• Fleming, P. G.; Ramirez, S.; Holmes, J. D.; Morris, M. A.; (2011) ‘AnXPS study of the oxidation of reduced ceria-lanthana nanocrystals’. Chemical Physics Letters, 509:51–57. • Fois, G.; Bolger, C. T.; Holmes, J. D.; Cross, G; (2011) ‘Proximal oxidation as a director of self organisation’. Journal of Materials Chemistry, 21:8772–8780. Return to President’s Report • Jung, S.J.; Lutz, T.; Boese, M; Holmes, J. D.; Boland, J. J.; (2011) ‘Surface energy driven agglomeration and growth of single crystal metal wires’. Nano Letters, 11:1294–1299. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxx

• Mokarian-Tabari, P, Collins, T.; Holmes, J. D.; Morris, M. A.; (2011) ‘Cyclical ‘ﬂipping of morphology in block copolymer ﬁlms’. Acs Nano, 5:4617–4623. • O’Byrne, J. P.; Li, Z.; Jones, S. L. T.; Fleming, P. G.; Larsson, J. A.; Morris. M. A.; Holmes, J. D. (2011) ‘Nitrogen-doped carbon nanotubes: growth, mechanism and structure’. Chemphyschem, 12:2995–3001.

Conference Publications • Bukins, J.; Kunakova, G.; Birjukovs, P.; Prikulis, J.; Varghese, J.; Holmes, J. D.; Erts, D.; (2011) Characterization of resistivity of Sb2S3 semiconductor nanowires by conductive AFM and in-situ methods. In: 222 eds. Advanced Materials Research. • Collins, G.; Fleming, P.; O’Dwyer, C.; Morris, M. A.; Holmes, J. D.; (2011) Functionalization of germanium nanowires. ECS Transactions Montreal, Canada, 2011–05–01- 2011–05–06. • Glynn,C.; Lotty,O.; McSweeney, W.; Holmes, J. D.; O’Dwyer, C. ; (2011) Raman scattering spectroscopy of metal-assisted chemically etched rough nanowires. ECS Transactions Montreal, Canada, 2011–05–01- 2011–05–06.

• McSweeney, W.; Lotty, O.; Holmes, J. D.; O’Dwyer, C. (2011) ‘Fabrication and characterization of single-crystal metal-assisted chemically etched rough Si nanowires for lithium-ion battery anodes. ECS Transactions Montreal, Canada, 2011–05–01- 2011–12–06.

• Rahme, K.; Doody, T.; Jain, A. K.; Chen ,L.; Morris, M. A.; O’Driscoll, C.; Holmes, J. D. (2011) Synthesis and stabilisation of poly(ethylene glycol)-coated gold nanoparticles for siRNA delivery. Nanomaterials.

Irwin, Sandra

Jansen, Marcel A.K.

Book Chapters • M.A.K. Jansen; (2011) ‘UV-B radiation; from stressor to regulatory signal’ In: Plant Stress Physiology. Oxford: CABI.

Peer Reviewed Journals • Amandine Radziejwoski, Kobe Vlieghe, Tim Lammens, Barbara Berckmans, Sara Maes, Marcel Jansen, Claudia Knappe, Andreas Albert, Harald K Return to Seidlitz, Günther Bahnweg, Dirk Inzé, Lieven De Veylder; (2011) ‘Atypical E2F activity coordinates PHR1 photolyase gene transcription with President’s Report endoreduplication onset’. The EMBO journal. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxi

• Elma Lahive, John O’Halloran, Marcel A.K. Jansen; (2011) ‘Differential sensitivity of four Lemnaceae species to zinc sulphate’. Environmental Experimental Botany. • Elma Lahive, Michael J.A. O’Callaghan, Marcel A.K. Jansen, and John O’Halloran. ; (2011) ‘Uptake and partitioning of zinc in Lemnaceae’. Ecotoxicology. • Grace M. Cott, Marcel A. K. Jansen and Deborah V. Chapman. ; (2011) ‘Salt Marshes on Peat Substrate: Where Blanket Bogs Encounter the Marine Environment’. Journal of Coastal Research.

• M. Schreiner, I. Mewis, S. Huyskens-Keil, M.A.K. Jansen, R. Zrenner, J. B. Winkler, N. O’Brien, A. Krumbein, ; (2011) ‘UV-B induced secondary plant metabolites — potential beneﬁts for plant and human health’. Critical Reviews in Plant Sciences.

• Michael M. Sturt, Marcel A.K. Jansen and Simon S.C. Harrison; (2011) ‘Responses of invertebrate grazers and algal productivity to light and nutrients’. Freshwater Biology. • Miranda Poage, Bénédicte Le Martret, Marcel A. K. Jansen, Gregory D. Nugent and Philip J. Dix; (2011) ‘Modiﬁcation of reactive oxygen species (ROS) scavenging capacity of chloroplasts through plastid transformation’. Plant Molecular Biology.

Jones, Peter

Books • Peter Jones; (2011) The Science of Gardening. UK: Crowood Press.

Kozachenko, Maxim

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxii

Leahy, Paul

Peer Reviewed Journals • Leahy, P. AND Kiely, G.; (2011) ‘Short duration rainfall extremes in Ireland: inﬂuence of climatic variability’. Water Resources Management. • P.G. Leahy and A.M. Foley; (2011) ‘Wind generation output during cold weather-driven electricity demand peaks in Ireland’. Energy. • Peichl, M,Leahy, P,Kiely, G; (2011) ‘Six-year Stable Annual Uptake of Carbon Dioxide in Intensively Managed Humid Temperate Grassland’. Ecosystems, 14:112–126.

Conference Publications • Mc Garrigle, E. and Leahy, P.; (2011) The effects of adding 1.8 GW of offshore wind to the 2020 Irish power system. Proceedings of the 3rd International Youth Conference on Energetics Leiria, Portugal. • Sibuet Watters, C. and Leahy, P.; (2011) Comparison of linear, Kalman ﬁlter and neural network downscaling of wind speeds from numerical weather prediction 10th International Conference on Environment and Electrical Engineering (EEEIC). • Sibuet Watters, C. and Leahy, P.; (2011) Inﬂuence of wind direction in the downscaling of wind speeds from numerical weather prediction. Proceedings of the American Institute of Aeronautics and Astronautics Memphis.

Mcallen, Robert

Edited Books • Julia Davenport and Rob McAllen (Ed.). (2011) Lough Hyne Marine Reserve @ 30, University College Cork: School of BEES, University College Cork.

Peer Reviewed Journals • Bastian, T., Haberlin, D., Purcell, J.E., Hays, G.C., Davenport, J., McAllen, R., Doyle, T.K.; (2011) ‘Large scale sampling reveals the spatio-temporal distributions of the jellyfish Aurelia aurita and Cyanea capillata in the Irish Sea’. Marine Biology. • Baxter, EJ,Rodger, HD,McAllen, R,Doyle, TK; (2011) ‘Gill disorders in marine-farmed salmon: investigating the role of hydrozoan jellyfish’. Aquaculture Environment Interactions, 1:245–257. • Baxter, EJ,Sturt, MM,Ruane, NM,Doyle, TK,McAllen, R,Harman, L,Rodger, HD; (2011) ‘Gill Damage to Atlantic Salmon (Salmo salar) Caused by the Common Jellyfish (Aurelia aurita) under Experimental Challenge’. Plos One, 6. Return to President’s Report • Hawkins, A., Knudsen, F.R., Davenport, J., McAllen, R., Bloomfield, H.J., Schilt, C., Johnson, P. (2011) ‘Grazing by sprat schools upon zooplankton within an enclosed marine lake’. Journal of Experimental Marine Biology and Ecology, 411:59–65. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxiii

Conference Publications • Mark Jessopp & Rob McAllen (2011) Nutrient enrichment and increased phytoplankton biomass in Lough Hyne — Is Lough Hyne Eutrophic. Lough Hyne @ 30 — Past, Present and Future Directions West Cork Hotel Skibbereen, 2011–06–03- 2011–06–04.

Morrissey, John

Peer Reviewed Journals • Barret, M., Egan, F., Fargier, E., Morrissey, J.P., and O’Gara, F.; (2011) ‘Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered’. Microbiology Journal, 157 (Pt 6):1726–1739. • Barret, M., Egan, F., Fargier, E., Morrissey, J.P., and O’Gara, F.; (2011) ‘Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered’. Microbiology, 157 (Pt 6Pt 6):1726–391726. • Barret, M., Morrissey, J.P., and O’Gara, F.; (2011) ‘Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence’. Biology and Fertility of Soils, 47 (7):729–743. • Holcombe, L.J., O’Gara, F., and Morrissey, J.P. (2011) ‘Implications of interspecies signaling for virulence of bacteria and fungal pathogens’. Future Microbiology, 6 (7):799–817. • Kennedy, J., O’Leary, N., Kiran, S., Morrissey, J., O’Gara, F., Selvin, J. and Dobson, A.D.W. (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications’. Journal of applied microbiology, 111:787–799. • Kennedy, J., O’Leary, N.D., Kiran, G.S., Morrissey, J.P., O’Gara, F., Selvin, J., and Dobson, A.D.W.; (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems’. Journal of applied microbiology, 111 (4):787–799. • Lane, M. M.,Burke, N.,Karreman, R.,Wolfe, K. H.,O’Byrne, C. P.,Morrissey, J. P.; (2011) ‘Physiological and metabolic diversity in the yeast Kluyveromyces marxianus’. Antonie Van Leeuwenhoek. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Ahigh-throughput screen to identify novel calcineurin inhibitors’. Journal of Microbiological Methods. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Diversity and anti-microbial activity of bacteria from the coastal marine sponges Amphilectus fucorum and Eurypon major’. Letters In Applied Microbiology. • O’ Halloran JA,Barbosa, T. M.,Morrissey, J. P.,Kennedy, J.,Gara, F. O.,Dobson, A. D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. J Appl Microbiol. Return to President’s Report • O’ Halloran, J.A., Barbosa, T.M., Morrissey, J.P., Kennedy, J., O’Gara, F., and Dobson, A.D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. Journal of applied microbiology, 110 (6):1495–1508. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxiv

• Phelan, R. W.,Clarke, C.,Morrissey, J. P.,Dobson, A. D.,O’Gara, F.,Barbosa, T. M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Appl Environ Microbiol, 77 (11):327–9327. • Phelan, R.W., Clarke, C., Barbosa, T., Morrissey, J.P., Dobson, A.D.W. and O’Gara, F. ; (2011) ‘Atetracycline resistance encoding plasmid from a Bacillus sp. strain isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77:327–329. • Phelan, R.W., Clarke, C., Morrissey, J.P., Dobson, A.D., O’Gara, F., and Barbosa, T.M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77 (1):327–329.

• Rice, O., Miller, S.H., Morrissey, J.P, and O’Gara, F.; (2011) ‘Exploitation of glucose catabolic gene fusions to investigate in situ expression during Pseudomonas-plant interactions’. Biology and Fertility of Soils.

Murphy, Jeremiah D.G.

• Asam, Z; Poulsen, TG; Nizami, AS; Raﬁque, R; Kiely, G; Murphy, JD; (2011) ‘How can we improve biomethane production per unit of feedstock in biogas plants?’. Applied Energy, 88:213–2018.

• James D Browne, Abdul Sattar Nizami, Jerry D Murphy ; (2011) ‘Assessing the cost of biofuel production with increasing penetration of the transport fuel market: a case study of gaseous biomethane in Ireland’. Renewable and Sustainable Energy Reviews. • Jerry D Murphy, T Thamsiriroj ; (2011) ‘What will power transport systems of the future?’. Materials Science Engineering. • Joseph McEniry, P O’Kiely, Paul Crossan, Elaine Groom, Jerry D Murphy ; (2011) ‘The effect of feedstock cost on biofuel cost as exempliﬁed by biomethane production from grass silage’. Biofuels, Bioproducts, Bioreﬁnery.

• Nizami, AS,Molander, S,Asam, Z,Raﬁque, R,Korres, NE,Kiely, G,Murphy, JD; (2011) ‘Comparative analysis using EIA for developed and developing countries: case studies of hydroelectric power plants in Pakistan, Norway and Sweden’. International Journal of Sustainable Development and World Ecology, 18 (2):134–142.

• Nizami, AS,Murphy, JD; (2011) ‘Optimizing the Operation of a Two-Phase Anaerobic Digestion System Digesting Grass Silage’. Environmental Return to Science and Technology, 45:7561–7569. President’s Report • Singh, A,Nigam, PS,Murphy, JD; (2011) ‘Mechanism and challenges in commercialisation of algal biofuels’. Bioresource Technology, 102:26–34. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxv

• Singh, A,Nigam, PS,Murphy, JD; (2011) ‘Renewable fuels from algae: An answer to debatable land based fuels’. Bioresource Technology, 102:10–16. • Smyth, BM,Murphy, JD; (2011) ‘The indirect effects of biofuels and what to do about them: the case of grass biomethane and its impact on livestock’. Biofuels, Bioproducts, Bioreﬁnery, 5:165–184. • Smyth, BM,Smyth, H,Murphy, JD; (2011) ‘Determining the regional potential for a grass biomethane industry’. Applied Energy, 88:2037–2049. • T Thamsiriroj, JD Murphy ; (2011) ‘Acritical review of the applicability of biodiesel and grass biomethane as biofuels to satisfy both biofuel targets and sustainability criteria’. Applied Energy, 88:1008–1019. • Thamsiriroj, T,Murphy, JD; (2011) ‘Modelling mono-digestion of grass silage in a 2-stage CSTR anaerobic digester using ADM1’. Bioresource Technology, 102:948–959. • Thamsiriroj, T,Murphy, JD; (2011) ‘The impact of the life cycle analysis methodology on whether biodiesel produced from residues can meet the EU sustainability criteria for biofuel facilities constructed after 2017’. Renewable Energy, 36:50–63. • Thanasit Thamsiriroj, Henry Smyth, Jerry D Murphy; (2011) ‘Aroadmap for the introduction of gaseous transport fuel: A case study for renewable natural gas in Ireland’. Renewable and Sustainable Energy Reviews.

O Gallachoir, Brian

Book Chapters • Dennehy, E.; Howley, M.; Ó Gallachóir, B.P.; (2011) ‘Energy in Ireland’ In: Energy Ireland Yearbook 2011. Dublin: bmf Business Services.

Peer Reviewed Journals • Bazilian, B.; Nussbaumer, P.; Rogner, H.H.; Brew-Hammond, A.; Foster, V.; Pachauri, S.; Williams, E.; Howells, M.; Niyongabo, P.; Musaba, L.; Ó Gallachóir, B.P.; Radka, M.; Kammen, D.M.; (2011) ‘Energy access scenarios to 2030 for the power sector in sub-Saharan Africa’. Utilities Policy. • Cahill, C.; Ó Gallachóir B. P.; (2011) ‘Quantifying the savings of an industry energy efﬁciency programme’. Energy Efﬁciency. • Conroy, N.; Deane, J.P.; Ó Gallachóir, B.P. (2011) ‘Wind Turbine Availability Should it be time or energy based? A Case Study in Ireland’. Renewable Energy, 36 (11):2967–2971. • Daly, H.; Ó Gallachóir B.P. (2011) ‘Modelling Future Private Car Energy Demand in Ireland’. Energy Policy, 39 (12):7815–7824. • Daly, HE; Ó Gallachóir, BP; (2011) ‘Modelling Private Car Energy Demand Using a Technological Car Stock Model’. Transportation Research Part D-Transport And Environment, 16 (2):93–101. • Dineen, D; Ó Gallachóir, BP; (2011) ‘Modelling the Impacts of Building Regulations and a Property Bubble on Residential Space and Water Heating’. Energy and Buildings, 43 (1):166–178. • Rogan, F.; Cahill, C.J.; Ó Gallachóir, B.P.; (2011) ‘Decomposition Analysis of Gas Consumption in the Residential Sector in Ireland’. Energy Policy. Return to President’s Report • Rogan, F; Dennehy, E; Daly, H; Howley, M; Ó Gallachóir, BP; (2011) ‘Impacts of an Emission Based Private Car Taxation Policy — One Year Ex-Post Analysis’. Transportation Research Part A Policy and Practice, 45 (7):583–597. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxvi

• Rout, U.K.; Voss, A.; Singh, A.; Blesl, M.; Fahl, U.; Ó Gallachóir, B.P. (2011) ‘Energy and emissions forecast for China over a long-time horizon’. Energy, 36 (1):1–11. Conference Publications • Chiodi, A.; Deane, J.P.; Gargiulo, M.; Ó Gallachóir B. P.; (2011) Modelling Electricity Generation — Comparing Results From a Power Systems Model and an Energy Systems model. International Energy Workshop 2011 Stanford University, Stanford, CA, 2011–06–06- 2011–06–09. • Daly, H.; Ó Gallachóir, B.P.; (2011) Modelling future private car energy demand using two techno-economic approaches eceee 2011. Energy efficiency first: The foundation of a low-carbon society Belambra Presqu’île de Giens, France, 2011–06–06- 2011–06–11. • Deane, J.P.; Dalton, G.; Ó Gallachóir B. P.; (2011) Analysis of 500MW of Wave Energy on the All Ireland Market. Second Workshop on Economics of Ocean and Marine Renewable Energy University College Cork, 2011–06–13- 2011–06–13. • Dineen, D.; Rogan, F.; Cronin, W.; Ó Gallachóir B. P.; (2011) Modelling residential energy savings due to Ireland’s National Retrofit Programme using DEAP and LEAP International Energy Workshop 2011 2011–06–06- 2011–06–09. • Rogan, F.; Ó Gallachóir, B.P.; (2011) Ex-Post Evaluation of a Residential Energy Efficiency Policy Measure Using Empirical Data eceee 2011 Energy efficiency first: The foundation of a low-carbon society Belambra Presqu’île de Giens, France, 2011–06–06- 2011–06–11. • Ó Gallachóir, B. P.; Chiodi, A.; Gargiulo, M.; (2011) Long Term Energy Scenarios for Ireland — the role of ocean energy. Second Workshop on Economics of Ocean and Marine Renewable Energy University College Cork, 2011–06–13- 2011–06–13. Published Reports • Deane, J.P.; Walsh, D.; FitzGerald, J.; Ó Gallachóir, B.P.; (2011) Comparing Electricity Modelling for Energy Forecasts: PLEXOS and IDEM. Sustainable Energy Authority of Ireland. • Dennehy, E.; Howley, M.; Ó Gallachóir, B.P.; (2011) Energy Security in Ireland: A Statistical Overview. Sustainable energy Authority of Ireland. • Howley, M.; Dennehy, E.; Holland, M.; Ó Gallachóir, B.P. (2011) Energy in Ireland 1990 — 2010. Sustainable Energy Authority of Ireland. O’Brien, Nora

Return to • O’Sullivan, A. M. and O’Callaghan, Y. C. and O’Grady, M. N. and Queguineur, B. and Hanniffy, D. and Troy, D. J. and Kerry, J. P. and O’Brien, N. M. President’s Report (2011) ‘In vitro and cellular antioxidant activities of seaweed extracts prepared from ﬁve brown seaweeds harvested in spring from the west coast of Ireland’. Food Chemistry, 126 (3):1064–1070. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxvii

O’Gara, Fergal

Peer Reviewed Journals • Barret, M., Egan, F., Fargier, E., Morrissey, J.P., and O’Gara, F.; (2011) ‘Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered’. Microbiology Journal, 157 (Pt 6):1726–1739. • Barret, M., Morrissey, J.P., and O’Gara, F.; (2011) ‘Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence’. Biology and Fertility of Soils, 47 (7):729–743. • Flemer B, Kennedy J, Margassery LM, Morrissey JP, O’Gara F, Dobson AD. (2011) ‘Diversity and antimicrobial activities of microbes from two Irish marine sponges, Suberites carnosus and Leucosolenia sp’. Journal of applied microbiology. • Holcombe, L.J., O’Gara, F., and Morrissey, J.P. (2011) ‘Implications of interspecies signaling for virulence of bacteria and fungal pathogens’. Future Microbiology, 6 (7):799–817. • Kennedy, J., O’Leary, N.D., Kiran, G.S., Morrissey, J.P., O’Gara, F., Selvin, J., and Dobson, A.D.W.; (2011) ‘Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems’. Journal of applied microbiology, 111 (4):787–799. • Legendre, C., Mooij, M.J., Adams, C., and O’Gara, F.; (2011) ‘Impaired expression of hypoxia-inducible factor-1α in cystic ﬁbrosis airway epithelial cells — A role for HIF-1 in the pathophysiology of CF?’. Journal of Cystic Fibrosis, 10 (4):286–290. • Margassery, L.M., Kennedy, J., O’Gara, F., Dobson, A.D.W. and Morrissey, J.P. (2011) ‘Ahigh-throughput screen to identify novel calcineurin inhibitors’. Journal of Microbiological Methods. • O’ Halloran, J.A., Barbosa, T.M., Morrissey, J.P., Kennedy, J., O’Gara, F., and Dobson, A.D.; (2011) ‘Diversity and antimicrobial activity of Pseudovibrio spp. from Irish marine sponges’. Journal of applied microbiology, 110 (6):1495–1508. • O’Callaghan, J., Reen, F.J., Adams, C., and O’Gara, F. (2011) ‘Low oxygen induces the T3SS in Pseudomonas aeruginosa via modulation of the small RNAs, rsmZ and rsmY’.Microbiology. • Phelan RW, O’ Halloran JA, Kennedy J, Morrissey JP, Dobson AD, O’Gara F, Barbosa TM. (2011) ‘Diversity and bioactive potential of endospore-forming bacteria cultured from the marine sponge Haliclona simulans’. Journal of applied microbiology. • Phelan, R.W., Clarke, C., Morrissey, J.P., Dobson, A.D., O’Gara, F., and Barbosa, T.M.; (2011) ‘Tetracycline resistance-encoding plasmid from Bacillus sp. strain #24, isolated from the marine sponge Haliclona simulans’. Applied and environmental microbiology, 77 (1):327–329. • Reen, F.J., Mooij, M.J., Holcombe, L.J., McSweeney, C.M., McGlacken, G.P., Morrissey, J.P., and O’Gara, F.; (2011) ‘The Pseudomonas quinolone signal (PQS), and its precursor HHQ, modulate interspecies and interkingdom behaviour’. FEMS Microbiol Ecol, 77 (2):413–428. • Rice, O., Miller, S.H., Morrissey, J.P, and O’Gara, F.; (2011) ‘Exploitation of glucose catabolic gene fusions to investigate in situ expression during Pseudomonas-plant interactions’. Biology and Fertility of Soils.

Return to • Smith, E.M, McCarthy, J., Nevin, R., Khan, M.R., Dow, J.M., O’Gara, F., and Doohan, F.M. (2011) ‘In vitro analyses are not reliable predictors of the President’s Report plant growth promotion capability of bacteria; a Pseudomonas ﬂuorescens strain that promotes the growth and yield of wheat’. Journal of applied microbiology, 111 (3):683–692. UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxviii

O’Halloran, John

• Donaghy, AM,Green, RE,O’Halloran, J; (2011) ‘Timing of autumn migration of young Corncrakes Crex crex’. IBIS, 153:425–428. • Elma Lahive, John O’Halloran, Marcel A.K. Jansen; (2011) ‘Differential sensitivity of four Lemnaceae species to zinc sulphate’. Environmental Experimental Botany. • Elma Lahive, Michael J.A. O’Callaghan, Marcel A.K. Jansen, and John O’Halloran. ; (2011) ‘Uptake and partitioning of zinc in Lemnaceae’. Ecotoxicology.

• O’Connell, MM, Keating, U, McElligott, D, O’Reill, P., O’Callaghan, J and O’Halloran, J (2011) ‘Aninvestigation of a novel anomalous pink feather colouration in the Mute Swan Cygnus olor in Britain and Ireland’. Wildfowl, :152–165. • O’Driscoll, D.,Skrabakova, Z.,O’Halloran, J.,van Pelt, F. N.,James, K. J.; (2011) ‘Mussels Increase Xenobiotic (Azaspiracid) Toxicity Using a Unique Bioconversion Mechanism’. Environ Sci Technol. • Sandra Irwin, Mark W. Wilson, Thomas C. Kelly, Barry O’Mahony, Geoff Oliver, Paul Troake, Barry Ryan, Chris Cullen, Barry O’Donoghue, John O’Halloran (2011) ‘The breeding biology of Hen Harriers Circus cyaneus in Ireland over a ﬁve year period’. Irish Birds, :165–172. • Sweeney, O.F.McD; Wilson, M.W; Irwin, S; Kelly, T.C; Gittings, T. and O’Halloran, J (2011) ‘Breeding birds of native woodlands and plantations forests in Ireland’. Irish Birds.

Published Reports • Jessopp, M., McAllen, R., O’Halloran, J., Kelly, T.C.; (2011) Nutrient and Ecosystem Dynamics in Ireland’s only marine nature reserve (NEIDIN) — Report Series 66. Environmental Protection Agency, Ireland. Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cclxxxix

O’Sullivan, Dominic

Conference Publications • Brendan Walsh, Dominic O’ Sullivan (2011) The Application of Phase Change Materials to Evaporative Cooling for Thermal Energy Storage in Ireland. Sustainable Development 2011 Dublin. • Sean Murray, Dominic O’ Sullivan (2011) The Carbon Neutral Building Project. Sustainable Development 2011.

Ramsay, Ruth

• Fermer, J; Culloty, SC; Kelly, TC; O’Riordan, RM; (2011) ‘Manipulation of Cerastoderma edule burrowing ability by Meiogymnophallus minutus metacercariae’. Journal of The Marine Biological Association of The United Kingdom, 91 (4):907–911.

• Quirke, T & O’Riordan, R (2011) ‘Evaluation and interpretation of the effects of environmental enrichment utilising varying degrees of sampling effort’. Zoo Biology. • Quirke, T & O’Riordan, R. (2011) ‘Factors inﬂuencing the behaviour of cheetahs (Acinonyx jubatus) in captivity’. Journal of Ethology. • Quirke, T & O’Riordan, R.M. (2011) ‘The effect of a randomised enrichment treatment schedule on the behaviour of cheetahs (Acinonyx jubatus)’. Applied Animal Behaviour Science, 135:103–109.

• Quirke, T; O’Riordan, RM ; (2011) ‘The effect of different types of enrichment on the behaviour of cheetahs in captivity’. Applied Animal Behaviour Return to Science, 133 (1–2):87–94. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxc

Rogan, Emer

Ruth, Albert

Sage, Colin

Books • Sage, C; (2011) Environment and Food. Abingdon, Oxon, UK: Routledge.

Other Journals • Colin Sage (2011) ‘Combustili fossili e acqua dolce: Sﬁde per il sistema globale dell’alimentazione’ Ambiente Societa Territorio, 56 (5):8–12. Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxci

Sheehan, David

Peer Reviewed Journals • Madadlou, A., Iacopino, D., Sheehan, D., Emam-djomeh, Z. and Mousavi, M.E. (2011) ‘Ultrasound-assisted generation of ACE-inhibitory peptides from casein hydrolyzed with nanoencapsulated protease’. Journal of Science of Food and Agriculture, 91:2112–2116. • Tyther, R., McDonagh, B. and Sheehan D (2011) ‘Proteomics in investigation of protein nitration in kidney disease: Technical challenges and perspectives from the spontaneously hypertensive rat’. Mass Spectrometry Reviews, 30:121–141.

Van Pelt, Frank

Peer Reviewed Journals • Guillaume Juhel, Emeline Batisse, Quitterie Hugues, Deirdre Daly, Frank N.A.M. van Pelt, John O’Halloran, and Marcel A.K. Jansen; (2011) ‘Alumina nanoparticles enhance growth of Lemna minor’. Aquatic Toxicology. • O’Driscoll, D.,Skrabakova, Z.,O’Halloran, J.,van Pelt, F. N.,James, K. J.; (2011) ‘Mussels Increase Xenobiotic (Azaspiracid) Toxicity Using a Unique Bioconversion Mechanism’. Environ Sci Technol.

Venables, Dean

• Chen, J., Wenger, J.C., and Venables, D.S.; (2011) ‘Near-Ultraviolet Absorption Cross Sections of Nitrophenols and Their Potential Inﬂuence on Tropospheric Oxidation Capacity’. Journal of Physical Chemistry A, 115:12235–12242.

Wenger, John

Wheeler, Andrew

Book Chapters Return to • Wheeler, A.J. & Stadnitskaya, A. ; (2011) ‘Benthic deep-sea carbonates: reefs and seeps’ In: Heiko Hüneke & Thierry Mulder (Eds.). Deep-Sea President’s Report Sediments (a book of the series Developments in Sedimentology). Amsterdam: Elsevier. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxcii

• López Correa, M., Montagna, P., Joseph, N., Rüggeberg, A., Fietzke, J., Flögel, S., Dorschel, B., Goldstein, S.L., Wheeler, A., Freiwald, A. (2011) ‘Preboreal onset of cold-water coral growth beyond the Arctic Circle revealed by coupled radiocarbon and U-series dating and neodymium isotopes’. Quaternary Science Reviews.

• M. Thierens, H. Pirlet, C. Colin, K. Latruwe, F. Vanhaecke, J.R. Lee, J.-B. Stuut, J. Titschack, V.A.I. Huvenne, B. Dorschel, A.J. Wheeler, J.-P., Henriet (2011) ‘Ice-rafting from the British-Irish ice sheet since the earliest Pleistocene (2.6 million years ago): implications for long-term mid-latitudinal ice-sheet growth in the North Atlantic region’. Quaternary Science Reviews. • Van Landeghem, K.J.J., Baas, J.H., Mitchell, N.C., Wilcockson, D., Wheeler, A.J. (2011) ‘Reversed sediment wave migration in the Irish Sea, NW Europe: a reappraisal of the validity of geometry-based predictive modelling and assumptions’. Marine Geology.

Whelan, Padraig

Forest Ecology

Harrison, Simon

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxciii

Irwin, Sandra

O’Halloran, John

• Elma Lahive, Michael J.A. O’Callaghan, Marcel A.K. Jansen, and John O’Halloran. ; (2011) ‘Uptake and partitioning of zinc in Lemnaceae’. Ecotoxicology.

• Guillaume Juhel, Emeline Batisse, Quitterie Hugues, Deirdre Daly, Frank N.A.M. van Pelt, John O’Halloran, and Marcel A.K. Jansen; (2011) ‘Alumina nanoparticles enhance growth of Lemna minor’. Aquatic Toxicology. • O’Connell, MM, Keating, U, McElligott, D, O’Reill, P., O’Callaghan, J and O’Halloran, J (2011) ‘Aninvestigation of a novel anomalous pink feather colouration in the Mute Swan Cygnus olor in Britain and Ireland’. Wildfowl, :152–165. • O’Driscoll, D.,Skrabakova, Z.,O’Halloran, J.,van Pelt, F. N.,James, K. J.; (2011) ‘Mussels Increase Xenobiotic (Azaspiracid) Toxicity Using a Unique Bioconversion Mechanism’. Environ Sci Technol. • Sandra Irwin, Mark W. Wilson, Thomas C. Kelly, Barry O’Mahony, Geoff Oliver, Paul Troake, Barry Ryan, Chris Cullen, Barry O’Donoghue, John O’Halloran (2011) ‘The breeding biology of Hen Harriers Circus cyaneus in Ireland over a ﬁve year period’. Irish Birds, :165–172.

Return to • Sweeney, O.F.McD; Wilson, M.W; Irwin, S; Kelly, T.C; Gittings, T. and O’Halloran, J (2011) ‘Breeding birds of native woodlands and plantations President’s Report forests in Ireland’. Irish Birds. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxciv

Cashman, Kevin

Book Chapters • Flynn, A.; (2011) ‘Galactosemia’ In: Encyclopedia of Dairy Sciences. San Diego: Academic Press. Peer Reviewed Journals • Flynn, A.; (2011) ‘Scientiﬁc substantiation of health claims in the EU’.Proceedings of the Nutrition Society, 70:1–7. • L.J. Black, J. Ireland, A. Mller, M. Roe, J. Walton, A. Flynn, P.M. Finglas, M. Kiely; (2011) ‘Development of an on-line Irish food composition database for nutrients’. Journal of Food Composition and Analysis. • McKenna G, Allen PF, O’Mahony D, Flynn A, DaMata C, Cronin M, Woods N; (2011) ‘Impact of tooth replacement strategies on the nutritional status of partially dentate elders’. Gerodontology. • O’Sullivan, A,Gibney, MJ,Connor, AO,Mion, B,Kaluskar, S,Cashman, KD,Flynn, A,Shanahan, F,Brennan, L; (2011) ‘Biochemical and metabolomic phenotyping in the identiﬁcation of a vitamin D responsive metabotype for markers of the metabolic syndrome’. Molecular Nutrition and Food Research, 55:679–690. • Tlustos, C., Sheridan, M., O’Sullivan, D., Anderson, W., Flynn, A. ; (2011) ‘The dioxin contamination incident in Ireland, 2008: analytical results and congener patterns’. Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Amp; Risk Assessment, 28:1–11. Conference Publications • McKenna G, Allen PF, Flynn A, O’Mahony D, Cronin M, Woods N; (2011) Comparison of tooth replacement strategies on the nutritional status of older patients: A randomised controlled clinical trial. 7th Congress of the EUGMS. Mccarthy, Mary

Book Chapters Return to President’s Report • McCarthy, M. Cowan, C. and Wycherley A.; (2011) ‘Speciality Food Segments in Great Britian’ In: A Resilient European Food Industry in a Challanging World. New york: Nova Science Publishers, Inc. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxcv

Peer Reviewed Journals • Cronin J and McCarthy M. ; (2011) ‘Preventing game over: a study of the situated food choice inﬂuences within the videogames subculture’. Journal of Social Marketing.

• De Brun, McKenzie, K., McCarthy, M and McGloin, A. ; (2011) ‘The Emergence and Portrayal of Obesity in The Irish Times: Content Analysis of Obesity Coverage 1997–2009, Health Communication’. • Murphy, C., Henchion, M. McCarthy, M. & Williams, G.A.; (2011) ‘The prospect for acceptance of animal cloning in the european food chain: early insights from an Irish sentinal group’. AgBioForum, 14 (2):83–93.

Perry, Ivan

Human Factors Research Group

Flynn, Peter

Book Reviews Return to President’s Report • Peter Flynn (2011) JIRA 4 Essentials. Mountain View, CA. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxcvi

Murphy, Raegan

Books • Murphy. R; (2011) Dynamic assessment, intelligence and measurement. London: Wiley-Blackwell.

Peer Reviewed Journals • Cassimjee, N., Robbs, N. & Murphy, R; (2011) ‘Impulsive and rigid temperament subtypes and executive functioning: an exploratory study of temperament conﬁgurations and neuropsychological performance’. South African Journal of Psychology. • Murphy, R., Cassimjee, N. & Schur, C ; (2011) ‘Inﬂuence of socio-cultural factors on SRAVEN performance’. Journal of Psychology in Africa, 21 (1):x-x. • te Nijenhuis, J., Cho, S.H., Murphy, R. & Lee, K.H.; (2011) ‘The Flynn effect in Korea: large gains’. Personality and Individual Differences.

• te Nijenhuis, J., Murphy, R. & van Eeden, R. ; (2011) ‘The Flynn Effect in South Africa (published in Intelligence)’.

Book Reviews • Raegan Murphy; (2011) Dysgenics: Genetic Deterioration in Modern Populations. Second Revised Edition. Richard Lynn. London: Ulster Institute for Social Research, 2011.

Human Molecular Reproduction Research Group

Kenny, Louise

Book Chapters • Ofﬁah I, O’Donoghue K and Kenny LC; (2011) ‘Clinical Risk Factors for Preterm Birth’ In: Preterm Birth. Croatia: InTech.

Return to • Khashan AS, Kenny LC, Laursen TM, Mahmood U, Mortensen PB, Henriksen TB, O’Donoghue K; (2011) ‘Pregnancy and the risk of autoimmune President’s Report disease’. Plos One, 6 (5). UCC Research Publications 2011–2012 | Research Centres and Institutes ccxcvii

• Khashan AS, Kenny LC; (2011) ‘Re: Narchi H, Skinner A. 2010. Overweight and obesity in pregnancy do not adversely affect neonatal outcomes: new evidence. Journal of Obstetrics and Gynaecology 30:679–686’. Journal of Obstetrics and Gynaecology, 31 (4):1–3. • Khashan AS, McNamee R, Henriksen TB, Pedersen MG, Kenny LC, Abel KM, Mortensen PB; (2011) ‘Risk of affective disorders following prenatal exposure to severe life events: A Danish population-based cohort study’. Journal of Psychiatric Research. • McCarthy FP, Drewlo S, English FA, Kingdom J, Johns EJ, Kenny LC, Walsh SK (2011) ‘Evidence implicating peroxisome proliferator-activated receptor-Î3 in the pathogenesis of preeclampsia’. Hypertension, 58 (5):882–887.

• McCarthy FP, Drewlo S, Kingdom J, Johns EJ, Walsh SK, Kenny LC; (2011) ‘Peroxisome Proliferator-Activated Receptor-gamma as a Potential Therapeutic Target in the Treatment of Preeclampsia’. Hypertension, 58 (2):280–286.

• McCarthy FP, Kingdom JC, Kenny LC, Walsh SK; (2011) ‘Animalmodels of preeclampsia; uses and limitations’. Placenta, 32 (6):413–419. • North RA, McCowan LM, Dekker GA, Poston L, Chan EH, Stewart AW, Black MA, Taylor RS, Walker JJ, Baker PN, Kenny LC; (2011) ‘Clinical risk prediction for pre-eclampsia in nulliparous women: development of model in international prospective cohort’. BMJ (Clinical Research Ed.), 342.

Impact of Plant Nutrients on Primary Productivity

Jansen, Marcel A.K.

Book Chapters • M.A.K. Jansen; (2011) ‘UV-B radiation; from stressor to regulatory signal’ In: Plant Stress Physiology. Oxford: CABI.

Return to • Elma Lahive, Michael J.A. O’Callaghan, Marcel A.K. Jansen, and John O’Halloran. ; (2011) ‘Uptake and partitioning of zinc in Lemnaceae’. President’s Report Ecotoxicology. UCC Research Publications 2011–2012 | Research Centres and Institutes ccxcviii

• Michael M. Sturt, Marcel A.K. Jansen and Simon S.C. Harrison; (2011) ‘Responses of invertebrate grazers and algal productivity to light and nutrients’. Freshwater Biology.

Ionad Bairre

Higgs, Bettie

Book Chapters • Higgs, B. (2011) ‘Navigating Wormholes: Integrative Learning on a First Year Science Field Course’ In: Connected Science. Indiana: IU Press.

Peer Reviewed Journals • Hanratty,O.,Higgs,B.,Tan, E. (2011) ‘Undergraduate Research: an Irish Perspective’. International Journal for the Scholarship of Teaching and Learning.

Other Journals • Higgs, B., Burek, C.V. (2011) ‘Geoconservation: Theory and Practice’ Earth Science Ireland, 10 (10):30–30.

Mccarthy, Marian

Book Chapters • Marian McCarthy (2011) ‘Mapping the Journey: the implications of Multiple Intelligences and Teaching for Understanding for the Teaching of Return to Civic, Social and Political Education’ In: Multiple Intelligences Curriculum and Assessment Project (Digital Version). Cork: NAIRTL. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes ccxcix

Conference Publications • Cronin James, G R , Bettie Higgs, Marian McCarthy and Jacinta McKeon (2011) (2011) In at the Deep End: Graduate Teaching Assistants as Role Models in the University. Engaging Minds: Proceedings of the NAIRTL 5th Conference. • Lynn Marsh, Marian McCarthy, Maria Caples, and Caroline Dalton, UCC, and Richard Windle and Helen Lavery, University of Nottingham (2011) Show me the learning — re-usable learning objects as an active learning experience and resource. Engaging Minds: Proceedings of NAIRTL’s 5th Conference. • Marian McCarthy (2011) Aligning Learning Outcomes, Learning Activities and Assessment. El Sistema de Creditos Transferibles (SCT) y los Desa ﬁos de al Innovacion y Armonizacion Curricular en la Formacion de Pregrado Pucon City, Chile. • Marian McCarthy (2011) The Human Being: The Ultimate Simulator. TEDx Series from Medical Faculty UCC on Simulcare: Simulation- The Ultimate Pretence http://tedxtalks.ted.com/browse/talks-by-event/tedxucc.

Published Reports • Marian McCarthy (2011) Multiple Intelligences Curriculum and Assessment Project. Final Report: Chapter 5 (digitised version). NAIRTL.

Neville, Grace

Edited Books • Grace Neville, Yann Bevant and Anne Goarzin (Ed.). (2011) Ireland, France, Rebellion, Rennes: CRBP / Centre de Recherche Bretonne et Celtique de l’Universite de Rennes 2. Locus Project

Murray, Kevin

Books • Donna Thornton and Kevin Murray (2011) Bibliography of Publications on Irish Placenames. London: Irish Texts Society. • Pádraig Ó Riain, Diarmuid Ó Murchadha and Kevin Murray (2011) Historical Dictionary of Gaelic Placenames / Foclóir Stairiúil Áitainmneacha na Gaeilge, Fascicle 4 / Fascúl 4 [Ceall Ghabhann-Cláiríne]. London: Irish Texts Society.

Edited Books • Kevin Murray and Pádraig Ó Riain (Ed.). (2011) Edmund Hogan’s Onomasticon Goedelicum: Reconsiderations, London: Irish Texts Society.

Purcell, Emer

National Perinatal Epidemiology Centre

Greene, Richard

Peer Reviewed Journals • Lutomski JE, Byrne BM, Devane D, Greene RA; (2011) ‘Increasing trends in atonic postpartum haemorrhage in Ireland: An 11-year population-based cohort study’. BJOG: an international journal of obstetrics and gynaecology. • Lutomski, JE,Morrison, JJ,Greene, RA,Lydon-Rochelle, MT; (2011) ‘Maternal Morbidity During Hospitalization for Delivery’. Obstetrics and Gynecology, 117:596–602. • McNamara K, O’Donoghue K, O’Connell O and Greene RA; (2011) ‘Antenatal and Intrapartum Care of Pregnancy with lethal fetal anomaly’. The Obstetrician & Gynaecologist. Neonatal Brain Research Group

Boylan, Geraldine

Peer Reviewed Journals • Boylan GB; (2011) ‘EEG monitoring in the neonatal intensive care unit: A critical juncture’. Clinical Neurophysiology. • Korotchikova I, Stevenson NJ, Walsh BH, Murray DM, Boylan GB; (2011) ‘Quantitative EEG analysis in neonatal hypoxic ischaemic encephalopathy’. Clinical Neurophysiology. • Nadeem M, Murray DM, Boylan GB, Dempsey EM, Ryan CA; (2011) ‘Early blood glucose proﬁle and neurodevelopmental outcome at two years in neonatal hypoxic-ischaemic encephalopathy’. BMC Pediatrics, 11. • Stevenson NJ, O’Toole JM, Rankine LJ, Boylan GB, Boashash B. (2011) ‘Anonparametric feature for neonatal EEG seizure detection based on a representation of pseudo-periodicity’. Medical Engineering & Physics. • Temko A, Lightbody G, Thomas E, Boylan G, Marnane W. (2011) ‘Instantaneous Measure of EEG Channel Importance for Improved Patient-Adaptive Neonatal Seizure Detection’. IEEE Transactions On Biomedical Engineering. • Temko A, Nadeu C, Marnane W, Boylan G, Lightbody G (2011) ‘EEG signal description with spectral-envelope-based speech recognition features for detection of neonatal seizures’. IEEE Transactions on Information Technology in Biomedicine, 15 (6):839–847. Return to President’s Report • Temko, A; Thomas, E; Marnane, W; Lightbody, G; Boylan, G; (2011) ‘EEG-based neonatal seizure detection with Support Vector Machines’. Clinical Neurophysiology, 122 (3):464–473. UCC Research Publications 2011–2012 | Research Centres and Institutes ccci

• Temko, A; Thomas, E; Marnane, W; Lightbody, G; Boylan, G; (2011) ‘Performance assessment for EEG-based neonatal seizure detectors’. Clinical Neurophysiology, 122 (3):474–482. • Walsh BH, Boylan GB, Murray DM; (2011) ‘Nucleated Red Blood Cells and early EEG: Predicting Sarnat stage and two year outcome’. Early Human Development. • Walsh BH, Murray DM, Boylan GB. (2011) ‘The use of conventional EEG for the assessment of hypoxic ischaemic encephalopathy in the newborn: a review’. Clinical Neurophysiology, 122 (7):1284–1294. • Walsh, B. H.,Low, E.,Bogue, C. O.,Murray, D. M.,Boylan, G. B.; (2011) ‘Early continuous video electroencephalography in neonatal stroke’. Developmental Medicine and Child Neurology, 53 (11):89–9289.:WOS:000284891900019.

Dempsey, Eugene

Book Chapters • Dempsey, EM ; (2011) ‘Cerebral Metabolism in the preterm infant’ In: Handbook of Growth and Growth monitoring in Health and Disease. New York: Springer.

Peer Reviewed Journals • Armstrong, K.,Ryan, C. A.,Hawkes, C. P.,Janvier, A.,Dempsey, E. M.; (2011) ‘Life and death decisions for incompetent patients: determining best interests–the Irish perspective’. Acta Paediatr, 100 (44):519–23519. • Braima, O.,Akinlabi, O. L.,Ryan, C. A.,Dempsey, E. M. (2011) ‘Procedural training in neonatal care’. Ir Med J, 104 (33). • Dempsey E, McCreery K; (2011) ‘Local anaesthetic eye drops for prevention of pain in preterm infants undergoing screening for retinopathy of prematurity’. Cochrane Database of Systematic Reviews. • Hawkes CP, Bourke JF, Fitzgibbon J, Dempsey EM.; (2011) ‘Adisappearing neonatal skin lesion’. European Journal of Paediatrics. • Hawkes, C. P.,Dempsey, E. M.,Ryan, C. A.; (2011) ‘The Neopuff’s PEEP valve is ﬂow sensitive’. Acta Paediatr, 100 (33):360–3360. • Hawkes, C. P.,Hanotin, S.,O’Flaherty, B.,Woodworth, S.,Ryan, C. A.,Dempsey, E. M. (2011) ‘Using smart phone technology to teach neonatal endotracheal intubation (NeoTube): application development and uptake’. Acta Paediatr. Return to President’s Report • Nadeem, M.,Murray, D. M.,Boylan, G. B.,Dempsey, E. M.,Ryan, C. A.; (2011) ‘Early blood glucose proﬁle and neurodevelopmental outcome at two years in neonatal hypoxic-ischaemic encephalopathy’. BMC Pediatr, 11. UCC Research Publications 2011–2012 | Research Centres and Institutes cccii

Conference Publications • Analysis of Brian H. Walsh, Evonne Low, Joanna Teahan-Dillon, Shanthi Muttukrishna, Geraldine B. Boylan, Eugene M. Dempsey, Deirdre M. Murray; (2011) Analysis of Umbilical Cord Blood S-100 B in Perinatal Asphyxia Using Both ELISA and Luminex Technology. Pediatric Academic Society Meeting. • Colin P. Hawkes, Eugene M. Dempsey, C. Anthony Ryan; (2011) The Neopuff’s PEEP Valve Is More Sensitive at Lower Rates of Gas Flow. Pediatric Academic Society Meeting. • Colin P. Hawkes, Stefan Hanotin, Brian O’Flaherty, Simon Woodworth, C. Anthony Ryan, Eugene M. Dempsey; (2011) The iApproach to Teaching Neonatal Intubation: Co-Design of a Medical Procedural iPhone App. Pediatric Academic Society Meeting. • Correlatio Scott D. McCauley, Evonne Low, Colin P. Hawkes, Brian H. Walsh, Geraldine B. Boylan, Eugene M. Dempsey.; (2011) Correlation of Cardiac Output with Cerebral Oxygenation in Sick Preterm Infants during the Transitional Period. Pediatric Academic Society Meeting. • Jan Sirc, Eugene M. Dempsey, Jan Miletin; (2011) Comparison of Cerebral Tissue Oxygenation Index and Cardiac Output in Infants with Birth Weight Less Than 1250 Grams. Pediatric Academic Society Meeting. • Jan Sirc, Eugene M. Dempsey, Jan Miletin; (2011) Doppler-Derived Diastolic Ventricular Function in Infants with Birth Weight Less Than during First 48 Hours. Pediatric Academic Society Meeting. • Johannes B. Letshwiti, Katerina Pichova, Eugene M. Dempsey, Jan Miletin; (2011) Conservative Approach to Patent Ductus Arteriosus Management in Very Low Birth Weight Infants (VLBW). Pediatric Academic Society Meeting.

Morrison, John

Peer Reviewed Journals • Deepak Ajwani, John Morrison ; (2011) ‘AFlexible workload generator for simulating stream computing systems’.

Ryan, Cornelius A.

Peer Reviewed Journals • Armstrong, K.,Ryan, C. A.,Hawkes, C. P.,Janvier, A.,Dempsey, E. M.; (2011) ‘Life and death decisions for incompetent patients: determining best interests–the Irish perspective’. Acta Paediatr, 100 (44):519–23519. • Augustine Josie Ganda, Laila Fara Ibrahim, Kannan Natchimuthu, C. Anthony Ryan. (2011) ‘No more tears? Maternal Involvement During the Newborn Screening Examination’. Clinical Pediatrics, 50 (8):753–758. Return to President’s Report • Carlson V, Omer M, Ibrahim S, Ahmed S, O’Byrne K, Kenny L, Ryan C (2011) ‘Fifty years of Sudanese hospital-based obstetric outcomes and an international partnership’. An International Journal of Obstetrics and Gynaecology, 118 (13):1608–1616. UCC Research Publications 2011–2012 | Research Centres and Institutes ccciii

• Hawkes, C. P.,Dempsey, E. M.,Ryan, C. A.; (2011) ‘The Neopuff’s PEEP valve is ﬂow sensitive’. Acta Paediatr, 100 (33):360–3360. • Murphy, JN,Ryan, CA; (2011) ‘Handover rounds in Irish hospitals’. Irish Medical Journal, 180:27–30.

Northside Folklore Project

Desplanques, Marie-Annick

Peer Reviewed Journals • Desplanques, Marie-Annick ; (2011) ‘’A photograph and a story”. The Archive: Jnl. the Northside Folklore Project, (15).

Oral Health Research Centre

Whelton, Helen

Book Chapters • Whelton H; (2011) ‘Nutritional and Health-Promoting Properties of Dairy Products:’ In: Encyclopedia of Dairy Sciences 2nd Edition. London: Academic Press.

• Browne D, Whelton H, O’Mullane D, Tavener J, Flannery E; (2011) ‘The aesthetic impact of enamel ﬂuorosis on Irish adolescents’. Community Dentistry and Oral Epidemiology.

Return to • Guiney, H,Woods, N,Whelton, H,Mullane, DO; (2011) ‘Non-biological factors associated with tooth retention in Irish adults’. Community Dental President’s Report Health, 28:53–59. UCC Research Publications 2011–2012 | Research Centres and Institutes ccciv

Conference Publications • Whelton H (2011) Salivary ﬂuoride levels as a measurement of compliance with oral health promotion. European Organisation for Caries Research. PEI Technologies

Hayes, John

Conference Publications • D.B. Murray, J.G. Hayes, M.G. Egan, D.L. O’Sullivan; (2011) Supercapacitor testing for power smoothing in a variable speed offshore wave energy converter. IEEE Applied Power Electronics Conference. • J.G. Hayes, R.P.R. De Oliveira, S. Vaughan, M.G. Egan; (2011) Simpliﬁed electric vehicle power train models and range estimation. IEEE Vehicular Power and Propulsion Conference. • J.G. Hayes, R.P.R. De Oliveira, S. Vaughan; (2011) Range estimation for the Nissan Leaf and Tesla Roadster using simpliﬁed powertrain models. Irish Transport Research Network. • K.J. Hartnett, J.G. Hayes, M.G. Egan, M. Rylko; (2011) A Comparison of a CCTT Split-Winding and EE Integrated Magnetics for High-Power DC-DC Converters. IEEE Vehicular Power and Propulsion. Conference. • K.J. Hartnett, J.G. Hayes, M.G. Egan, M. Rylko; (2011) Novel CCTT-core split-winding integrated magnetic for high-power dc-dc converter. IEEE Energy Conversion Conference and Exhibition. PLANFORBIO

Butler, Fidelma

Return to Edited Books President’s Report • Butler, F and Kelleher, C (Ed.). (2011) Proceedings of the 1st All Ireland Mammal Symposium, Ireland: Ir Nat J. Special Supplement. UCC Research Publications 2011–2012 | Research Centres and Institutes cccv

Irwin, Sandra

O’Halloran, John

Peer Reviewed Journals • Bougaham, AF,Moulai, R,O’Halloran, J (2011) ‘Breeding biology of Grey Wagtails Motacilla cinerea at the southern edge of their breeding range (region of Bejaia, Algeria)’. Bird Study, 58:357–360. • Donaghy, AM,Green, RE,O’Halloran, J; (2011) ‘Timing of autumn migration of young Corncrakes Crex crex’. IBIS, 153:425–428. • Elma Lahive, John O’Halloran, Marcel A.K. Jansen; (2011) ‘Differential sensitivity of four Lemnaceae species to zinc sulphate’. Environmental Experimental Botany. • Elma Lahive, Michael J.A. O’Callaghan, Marcel A.K. Jansen, and John O’Halloran. ; (2011) ‘Uptake and partitioning of zinc in Lemnaceae’. Ecotoxicology. • Guillaume Juhel, Emeline Batisse, Quitterie Hugues, Deirdre Daly, Frank N.A.M. van Pelt, John O’Halloran, and Marcel A.K. Jansen; (2011) ‘Alumina nanoparticles enhance growth of Lemna minor’. Aquatic Toxicology. • O’Connell, MM, Keating, U, McElligott, D, O’Reill, P., O’Callaghan, J and O’Halloran, J (2011) ‘Aninvestigation of a novel anomalous pink feather colouration in the Mute Swan Cygnus olor in Britain and Ireland’. Wildfowl, :152–165. • O’Driscoll, D.,Skrabakova, Z.,O’Halloran, J.,van Pelt, F. N.,James, K. J.; (2011) ‘Mussels Increase Xenobiotic (Azaspiracid) Toxicity Using a Unique Bioconversion Mechanism’. Environ Sci Technol. Return to President’s Report • Sandra Irwin, Mark W. Wilson, Thomas C. Kelly, Barry O’Mahony, Geoff Oliver, Paul Troake, Barry Ryan, Chris Cullen, Barry O’Donoghue, John O’Halloran (2011) ‘The breeding biology of Hen Harriers Circus cyaneus in Ireland over a ﬁve year period’. Irish Birds, :165–172. UCC Research Publications 2011–2012 | Research Centres and Institutes cccvi

• Sweeney, O.F.McD; Wilson, M.W; Irwin, S; Kelly, T.C; Gittings, T. and O’Halloran, J (2011) ‘Breeding birds of native woodlands and plantations forests in Ireland’. Irish Birds.

Leahy, Paul

Murphy, Jeremiah D.G.

Peer Reviewed Journals • A Singh, AS Nizami, NE Korres, JD Murphy ; (2011) ‘The effect of reactor design on the sustainability of grass biomethane’. Renewable and Sustainable Energy Reviews, 15:1567–1574. • AS Nizami, A Singh, JD Murphy ; (2011) ‘Design, commissioning and start-up of a sequentially fed leach bed reactor complete with upﬂow anaerobic sludge blanket digesting grass silage’. Energy & Fuels, 25:823–834. • Abdul-Sattar Nizami, A Orozco, E. Groom, B. Diertrich, Jerry D. Murphy ; (2011) ‘How much gas can we get from grass?’. Applied Energy. Return to President’s Report • Asam, Z; Poulsen, TG; Nizami, AS; Raﬁque, R; Kiely, G; Murphy, JD; (2011) ‘How can we improve biomethane production per unit of feedstock in biogas plants?’. Applied Energy, 88:213–2018. UCC Research Publications 2011–2012 | Research Centres and Institutes cccvii

• Joseph McEniry, P O’Kiely, Paul Crossan, Elaine Groom, Jerry D Murphy ; (2011) ‘The effect of feedstock cost on biofuel cost as exempliﬁed by biomethane production from grass silage’. Biofuels, Bioproducts, Bioreﬁnery.

• Nizami, AS,Murphy, JD; (2011) ‘Optimizing the Operation of a Two-Phase Anaerobic Digestion System Digesting Grass Silage’. Environmental Science and Technology, 45:7561–7569.

• Singh, A,Nigam, PS,Murphy, JD; (2011) ‘Mechanism and challenges in commercialisation of algal biofuels’. Bioresource Technology, 102:26–34. • Singh, A,Nigam, PS,Murphy, JD; (2011) ‘Renewable fuels from algae: An answer to debatable land based fuels’. Bioresource Technology, 102:10–16.

• Thamsiriroj, T,Murphy, JD; (2011) ‘Modelling mono-digestion of grass silage in a 2-stage CSTR anaerobic digester using ADM1’. Bioresource Technology, 102:948–959.

• Thamsiriroj, T,Murphy, JD; (2011) ‘The impact of the life cycle analysis methodology on whether biodiesel produced from residues can meet the EU sustainability criteria for biofuel facilities constructed after 2017’. Renewable Energy, 36:50–63. • Thanasit Thamsiriroj, Henry Smyth, Jerry D Murphy; (2011) ‘Aroadmap for the introduction of gaseous transport fuel: A case study for renewable natural gas in Ireland’. Renewable and Sustainable Energy Reviews.

O Gallachoir, Brian

Book Chapters • Dennehy, E.; Howley, M.; Ó Gallachóir, B.P.; (2011) ‘Energy in Ireland’ In: Energy Ireland Yearbook 2011. Dublin: bmf Business Services.

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccviii

• Cahill, C.; Ó Gallachóir B. P.; (2011) ‘Quantifying the savings of an industry energy efﬁciency programme’. Energy Efﬁciency. • Conroy, N.; Deane, J.P.; Ó Gallachóir, B.P. (2011) ‘Wind Turbine Availability Should it be time or energy based? A Case Study in Ireland’. Renewable Energy, 36 (11):2967–2971.

• Daly, H.; Ó Gallachóir B.P. (2011) ‘Modelling Future Private Car Energy Demand in Ireland’. Energy Policy, 39 (12):7815–7824. • Daly, HE; Ó Gallachóir, BP; (2011) ‘Modelling Private Car Energy Demand Using a Technological Car Stock Model’. Transportation Research Part D-Transport And Environment, 16 (2):93–101. • Dineen, D; Ó Gallachóir, BP; (2011) ‘Modelling the Impacts of Building Regulations and a Property Bubble on Residential Space and Water Heating’. Energy and Buildings, 43 (1):166–178. • Rogan, F.; Cahill, C.J.; Ó Gallachóir, B.P.; (2011) ‘Decomposition Analysis of Gas Consumption in the Residential Sector in Ireland’. Energy Policy.

• Rogan, F; Dennehy, E; Daly, H; Howley, M; Ó Gallachóir, BP; (2011) ‘Impacts of an Emission Based Private Car Taxation Policy — One Year Ex-Post Analysis’. Transportation Research Part A Policy and Practice, 45 (7):583–597. • Rout, U.K.; Voss, A.; Singh, A.; Blesl, M.; Fahl, U.; Ó Gallachóir, B.P. (2011) ‘Energy and emissions forecast for China over a long-time horizon’. Energy, 36 (1):1–11.

• Rogan, F.; Ó Gallachóir, B.P.; (2011) Ex-Post Evaluation of a Residential Energy Efficiency Policy Measure Using Empirical Data eceee 2011 Energy efficiency first: The foundation of a low-carbon society Belambra Presqu’île de Giens, France, 2011–06–06- 2011–06–11.

• Ó Gallachóir, B. P.; Chiodi, A.; Gargiulo, M.; (2011) Long Term Energy Scenarios for Ireland — the role of ocean energy. Second Workshop on Return to Economics of Ocean and Marine Renewable Energy University College Cork, 2011–06–13- 2011–06–13. President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccix

• Dennehy, E.; Howley, M.; Ó Gallachóir, B.P.; (2011) Energy Security in Ireland: A Statistical Overview. Sustainable energy Authority of Ireland. • Howley, M.; Dennehy, E.; Holland, M.; Ó Gallachóir, B.P. (2011) Energy in Ireland 1990 — 2010. Sustainable Energy Authority of Ireland.

O’Sullivan, Dominic

• Sean Murray, Dominic O’ Sullivan (2011) The Carbon Neutral Building Project. Sustainable Development 2011.

Tyndall National Institute

Ellis, Andrew

Peer Reviewed Journals • Bonk, R,Vorreau, P,Hillerkuss, D,Freude, W,Zarris, G,Simeonidou, D,Parmigiani, F,Petropoulos, P,Weerasuriya, R,Ibrahim, S,Ellis, AD,Klonidis, D,Tomkos, I,Leuthold, J; (2011) ‘AnAll-Optical Grooming Switch for Interconnecting Access and Metro Ring Networks’. Rna-A Publication of The Rna Society, 3:206–214. • Frascella, P,Antony, C,Fabbri, SJ,Gunning, FCG,Gunning, P,McAuliffe, W,Cassidy, D,Ellis, AD; (2011) ‘Impact of Raman Ampliﬁcation on a 2-Tb/s Coherent WDM System’. IEEE Photonics Technology Letters, 23:959–961. • Frascella, P,Sygletos, S,Gunning, FCG,Weerasuriya, R,Gruner-Nielsen, L,Phelan, R,O’Gorman, J,Ellis, AD; (2011) ‘DPSK Signal Regeneration With a Dual-Pump Nondegenerate Phase-Sensitive Ampliﬁer’. IEEE Photonics Technology Letters, 23:516–518.

• Ibrahim, SK,Sygletos, S,Raﬁque, D,O’Dowd, JA,Weerasuriya, R,Ellis, AD; (2011) ‘Novel synchronous DPSK optical regenerator based on a feed-forward based carrier extraction scheme’. Optics Express, 19:9445–9452.

• Ibrahim, SK,Sygletos, S,Weerasuriya, R,Ellis, AD; (2011) ‘Novel real-time homodyne coherent receiver using a feed-forward based carrier extraction scheme for phase modulated signals’. Optics Express, 19:8320–8326. • Nelson, LE,Zhou, X,Mac Suibhne, N,Ellis, AD,Magill, P; (2011) ‘Experimental comparison of coherent polarization-switched QPSK to polarization-multiplexed QPSK for 10 x 100 km WDM transmission’. Optics Express, 19:10849–10856. Return to President’s Report • Raﬁque, D,Ellis, AD; (2011) ‘Impact of signal-ASE four-wave mixing on the effectiveness of digital back-propagation in 112 Gb/s PM-QPSK systems’. Optics Express, 19:3449–3454. UCC Research Publications 2011–2012 | Research Centres and Institutes cccx

• Rafique, D,Ellis, AD; (2011) ‘Nonlinear penalties in long-haul optical networks employing dynamic transponders’. Optics Express, 19:9044–9049. • Rafique, D,Mussolin, M,Forzati, M,Martensson, J,Chugtai, MN,Ellis, AD; (2011) ‘Compensation of intra-channel nonlinear fibre impairments using simplified digital back-propagation algorithm’. Optics Express, 19:9453–9460.

• Raﬁque, D,Zhao, J,Ellis, AD; (2011) ‘Compensation of Nonlinear Fibre Impairments in Coherent Systems Employing Spectrally Efﬁcient Modulation Formats’. Ieice Transactions On Communications, E94B:1815–1822.

• Rafique, D,Zhao, JA,Ellis, AD; (2011) ‘Digital back-propagation for spectrally efficient WDM 112 Gbit/s PM m-ary QAM transmission’. Optics Express, 19:5219–5224. • Sygletos, S,Ibrahim, SK,Weerasuriya, R,Phelan, R,Nielsen, LG,Bogris, A,Syvridis, D,O’Gorman, J,Ellis, AD; (2011) ‘Phase synchronization scheme for a practical phase sensitive amplifier of ASK-NRZ signals’. Optics Express, 19:12384–12391. • Weerasuriya, R,Sygletos, S,Ibrahim, SK,Gunning, FCG,Manning, RJ,Phelan, R,O’Carroll, J,Kelly, B,O’Gorman, J,Ellis, AD; (2011) ‘Comparison of Frequency Symmetric Signal Generation From a BPSK Input Using Fiber and Semiconductor-Based Nonlinear Elements’. IEEE Photonics Technology Letters, 23:651–653. • Zhao, J,Ellis, AD; (2011) ‘Demonstration of 10 Gbit/s transmission over 900 km SMF with Electronic Letters, 47:711–712.

• Zhao, J,Ellis, AD; (2011) ‘Offset-QAM based coherent WDM for spectral efﬁciency enhancement’. Optics Express, 19:14617–14631. • Zhao, JA,Ibrahim, SK,Raﬁque, D,Gunning, P,Ellis, AD; (2011) ‘Symbol Synchronization Exploiting the Symmetric Property in Optical Fast OFDM’. IEEE Photonics Technology Letters, 23 (9):594–596.

UREKA: Microbe Host Interaction

Gahan, Cormac

Peer Reviewed Journals • Bahey-el-din M and Gahan CG (2011) ‘Lactococcus lactis based vaccines: current status and future perspectives’. Human Vaccines, 7 (1):106–109.

• Casey PG, Hill C, Gahan CG (2011) ‘E. coli O104:H4 social media and the characterization of an emerging pathogen’. Bioengineered Bugs, 2 (3):189–193.

• Dowd GC, Casey PG, Begley M, Hill C, Gahan CG (2011) ‘Investigation of the role of ZurR in the physiology and pathogenesis of Listeria monocytogenes’. Fems Microbiology Letters. Return to President’s Report • Dowd, GC,Joyce, SA,Hill, C,Gahan, CGM; (2011) ‘Investigation of the Mechanisms by Which Listeria monocytogenes Grows in Porcine Gallbladder Bile’. Infection and Immunity, 79:369–379. UCC Research Publications 2011–2012 | Research Centres and Institutes cccxi

Ultrasonics Research Group

Wright, William

Book Chapters • Wright, WMD (2011) ‘Analytical methods: Ultrasonic techniques’ In: J. W. Fuquay, P.F. Fox and P. L. H. McSweeney (Eds.). Encyclopedia of Dairy Sciences. Oxford: Elsevier.

VALORAM Project

Doyle Prestwich, Barbara

Peer Reviewed Journals • Doyle Prestwich, B and O Herlihy E. (2011) ‘APreliminary Investigation into How Plant-Growth Promoting Rhizobacteria (PGPRs) Can Inﬂuence the Frequency of Gene Transfer in Agrobacterium and Transbacter-Mediated Transformation Systems’. Acta Horticultura.

• Velivelli, S., O Herlihy, E.O., Janczura, B., Doyle Prestwich, B., Ghyselinck, J and De Vos, P. ; (2011) ‘Efﬁcacy of Rhizobacteria on Plant Growth Promotion and Disease Suppression In Vitro’. Acta Horticultura. Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxii

Conference Publications • Barbara Doyle Prestwich and Eileen O Herlihy (2011) A Preliminary Investigation into how Plant Growth Promoting Rhizobacteria (PGPRs) can Inﬂuence the Frequency of Gene Transfer in Agrobacterium and Transbacter mediated Transformation Systems. 7th International Symposium on In Vitro Culture and Horticultural Breeding, Biotechnological Advances in In Vitro Horticultural Breeding 2011–09–18- 2011–09–22. • Eileen O Herlihy, Siva Linga Sasanka Velivelli, Bogumila Janczura and Barbara Doyle Prestwich (2011) Bacterial Emissions Can Lead to Healthier Plants. Irish Plant Scientists Annual Meeting, Belfast Queens University, Belfast, 2011–06–07- 2011–06–09. • Ghyselinck J, O Herlihy E, Heylen K, Velivelli, S, De Vos, P and Doyle Prestwich B. (2011) Screening for Antagonistic and Plant Growth Promoting Properties in Bacteria Isolated from the Central Andean Highlands. Ecology of Soil Microorganisms: Microbes as Important Drivers of Soil Processes. 2011–04–27- 2011–05–01. • Siva Linga Sasanka Velivelli, Eileen O Herlihy, Bogumila Janczura, Barbara Doyle Prestwich, Jonas Ghyselinck and Paul De Vos (2011) Efﬁcacy of Rhizobacteria on Plant Growth Promotion and Disease Suppression. 7th International Symposium on In Vitro Culture and Horticultural Breeding, Biotechnological Advances in In Vitro Horticultural Breeding Ghent, Belgium, 2011–09–18- 2011–09–22. Tyndall National Institute

A. Afzalian

Peer-reviewed journal • Physics of Gate Modulated Resonant Tunneling (RT)-FETs: Multi-barrier MOSFET for steep slope and high on-current, SOLID STATE ELECTRON, 59, 50–6 • Quantum Conﬁnement Effects in Capacitance Behavior of Multigate Silicon Nanowire MOSFETs, IEE P-OPTOELECTRON, 10(2), 300–30

A. Ahmad

Peer-reviewed conference proceedings • Enzyme-labelled based on amperometric detection for monitoring of polycyclic aromatic hydrocarbons in water, Proceedings CASi 2011, 3

N.D. Akhavan

Peer-reviewed journal • Inﬂuence of Elastic and Inelastic Electron-Phonon Interaction on Quantum Transport in Multigate Silicon Nanowire MOSFETs, IEEE T ELECTRON DEV, 58(4), 1029–103

L. Ansari

Return to Peer-reviewed conference proceedings President’s Report • Atomic scale simulation of a junctionless silicon nanowire transistor, Proceedings of Ultimate Integration on Silicon Conference (ULIS), 96–9 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxiii

S. Barth

Peer-reviewed journal • Defect Transfer from Nanoparticles to Nanowires, NANO LETT, 11(4), 1550–1555 • Diameter-Controlled Solid-Phase Seeding of Germanium Nanowires: Structural Characterization and Electrical Transport Properties, CHEM MATER, 23(14

V. Beni

Peer-reviewed journal • Investigation into the voltammetric behaviour and detection of selenium(IV) at metal electrodes in diverse electrolyte media , ANAL CHIM ACTA, 699(2), 127–13

D. Bitauld

Peer-reviewed journal • Timing characterization of 100 GHz passively mode-locked discrete mode laser diodes , OPT EXPRESS, 19, 1398

• Design of waveguide-integrated semiconductor laser sources for optical frequency comb generation, OPT LETT, 36, 298

K.Y. Byun

Peer-reviewed journal • Surface activation using oxygen and nitrogen radical for Ge-Si Avalanche photodiode integration , MICROELECTRON ENG, 88(4), 522–52

J.B. Carey

Peer-reviewed journal • Microneedle Array Design Determines the Induction of Protective Memory CD8(+) T Cell Responses Induced by a Recombinant Live Malaria Vaccine in Mice, PLOS ONE, 6(7), e2244

M.A. Caro

Peer-reviewed journal • Built-in ﬁeld control in alloyed c-plane III-N quantum dots and wells, J APPL PHYS, 109(8), 8411 Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxiv

R. Charash

Peer-reviewed journal • Cleaved-facet violet laser diodes with lattice-matched Al0.82In0.18N/GaN multilayers as n-cladding, APPL PHYS LETT, 98, 20111

W. Chen

Peer-reviewed journal • Effect of nanoparticles on ferroelectric and electrical properties of novel PMNT thin-ﬁlms , THIN SOLID FILMS, 1,

P.J. Clarke

Peer-reviewed journal • Robust gigahertz ﬁber quantum key distribution, APPL PHYS LETT, 98(13), 13110

A.M. Clarke

Peer-reviewed conference proceedings • Demonstration of Wavelength Agile Metro Node using Reﬂective Colorless Components, Proceedings of OFC/NFOE

J.P. Colinge

Peer-reviewed journal • Junctionless Nanowire Transistor: Complementary Metal-Oxide-Semiconductor Without Junctions, Science of Advanced Materials,

• A Simulation Comparison between Junctionless and Inversion-Mode MuGFETs, ECST, 35(5), 63–7 • A Simulation Comparison between Junctionless and Inversion-Mode MuGFETs, ECS Transactions, 35(5), 63–7

C.A. Colinge

Book chapter • Low-Temperature Fabrication of Germanium-on-Insulator Using Remote Plasma Activation Bonding and Hydrogen Exfoliation, Semiconductor-On-Insulator Materials for Nanoelectronics, 2,

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxv

C.J. Collins

Peer-reviewed journal • Pharmaceutical modulation of diffusion potentials at aqueous aqueous boundaries under laminar ﬂow conditions, ELECTROPHORESIS, 32, 844–84 • Pharmaceutical modulation of diffusion potentials at aqueous-aqueous boundaries under laminar ﬂow conditions, ELECTROPHORESIS, 32(8), 844–84

G. Collins

Peer-reviewed journal • Organic Functionalization of Germanium Nanowires using Arenediazonium Salts , CHEM MATER, 23(7), 1883–189

T.M. Correia

Peer-reviewed journal • PST thin ﬁlms for electrocaloric coolers, J PHYS D APPL PHYS, 44(16), 16540

J. Cuffe

Peer-reviewed journal • Fine control of critical dimension for the fabrication of large bandgap high frequency photonic and phononic crystals, MICROELECTRON ENG, 88(8), 2233–223

J. Dailey

Peer-reviewed conference proceedings • All-Optical Modulation Converter for OOK to Alternate-Mark-Inversion and Duobinary at 42.6 Gbps, CLEO Europe Proceeding

K. Dawson

Peer-reviewed journal • Nanofabrication of Robust Nanoelectrodes for Electrochemical Applications, ECST, 28(34), 29–3

• Single Nanoskived Nanowires for Electrochemical Applications, ANAL CHEM, 83(14), 5535 554 Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxvi

N. Dehdashti-Akhavan

Peer-reviewed journal • Nanowire to Single-Electron Transistor Transition in Trigate SOI MOSFETs, IEEE T ELECTRON DEV, 58 (1), 26–3 • Improvement of carrier ballisticity in junctionless nanowire transistors, APPL PHYS LETT, 98, 10351 • Inﬂuence of single-atom impurity scattering on quantum transport in silicon nanowire transistors, Proceedings of EUROSOI 2011, VII Workshop of the Thematic Network on Silicon On Insulator Technology, Devices and Circuits, 79–8

S. Deng

Peer-reviewed journal • Integrable bias solution for avalanche photodiodes, ELECTRON LETT, 47(4), 240

M. De-Souza

Peer-reviewed journal • Cryogenic Operation of Junctionless Nanowire Transistors , IEEE ELECTR DEVICE L, 32(10), 1322–132

V. Dimastrodonato

Peer-reviewed conference proceedings • Relevance of the purity level in a MetalOrganic Vapour Phase Epitaxy reactor environment for the growth of high quality pyramidal site-controlled Quantum Dots, Journal of Crystal Growth — ICMOVPE 2010 Proceeding, 315, 11

B. Ding

Peer-reviewed journal • Gold ﬁlm-terminated 3-dimensional photonic crystals, APPL PHYS A-MATER, 103(3), 889–89

K.P. Donegan

Peer-reviewed journal • Microwave-assisted synthesis of icosahedral nickel nanocrystals , CRYSTENGCOMM, 13(6), 2023–202

R.T. Doria

Return to Peer-reviewed journal President’s Report • Junctionless Multiple-Gate Transistors for Analog Applications , IEEE T ELECTRON DEV, 58(8)sp.iss, 2511–251 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxvii

D. Dufaker

Peer-reviewed journal • Exciton-phonon coupling in single quantum dots with different barriers , APPL PHYS LETT, 98, 25191

S.D. Elliott

Peer-reviewed journal • Structural and energetic origin of defects at the interface between germanium and a high-k dielectric from ﬁrst principles, APPL PHYS LETT, 98(8), 8290

J.S. Ellis

Peer-reviewed journal • Towards biomolecule-based information processing using engineered nanopores, Nano Communication Networks , 2(1), 62–7

M. Euler

Peer-reviewed journal • Sub-mm Wet Etched Linear to Circular Polarization FSS Based Polarization Converters, IEE P-OPTOELECTRON, 59(8), 3103–3106

R.A. Farrell

Peer-reviewed journal • Surface-Directed Dewetting of a Block Copolymer for Fabricating Highly Uniform Nanostructured Microdroplets and Concentric Nanorings, ACS NANO, 5(2), 1073–108

B. Fitzgibbon

Peer-reviewed journal • Calculation of Cycle Lengths in Higher Order Error Feedback Modulators With Constant Inputs, IEEE T CIRCUITS-II, 58( • Hardware Reduction in Digital Delta-Sigma Modulators Via Bus-Splitting and Error Masking-Part I: Constant Input, IEEE T CIRCUITS-I, 58(9), 2137 — 2148 • A spur-free MASH DDSM with high-order ﬁltered dither, IEEE T CIRCUITS-II, 58(9), 585–58 Return to President’s Report • A Novel Implementation of Dithered Digital Delta-Sigma Modulators via Bus-Splitting, Proceedings of 2011 IEEE International Symposium on Circuits and Systems (ISCAS), 1363–136 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxviii

P. Fleming

Peer-reviewed journal • An XPS study of the oxidation of reduced ceria-lanthana nanocrystals, CHEM PHYS LETT, 509(1–3), 51–5

P.G. Fleming

Peer-reviewed journal • The complex synthesis and solid state chemistry of ceria-lanthana solid solutions prepared via a hexamethylenetetramine precipitation , J SOLID STATE CHEM, 184(9), 2595–260

G. Fois

Peer-reviewed journal • Proximal oxidation as a director of self-organisation , J MATER CHEM, 21(24), 8772–8780

P. Frascella

Peer-reviewed journal • DPSK Signal Regeneration With a Dual-Pump Nondegenerate Phase-Sensitive Ampliﬁer, IEEE PHOTONIC TECH L, 23(8), 516–51 • Impact of Raman Ampliﬁcation on a 2-Tb/s Coherent WDM System, IEEE PHOTONIC TECH L, 23(14), 959–96

M. Gaffney

Peer-reviewed conference proceedings • A Smart Wireless Inertial Measurement Unit System: Simplifying & Encouraging Usage of WIMU Technology, Proc. Pervasive Health 201

F. Gity

Peer-reviewed journal • Modeling the Effects of Interface Traps on the Static and Dynamic Characteristics of Ge/Si Avalanche Photodiodes, IEEE J QUANTUM ELECT, 47(6), 849–85

A.K. Gnanappa

Return to Peer-reviewed journal President’s Report • Improved aging performance of vapor phase deposited hydrophobic self-assembled monolayers, APPL SURF SCI, 257(9), 4331–433 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxix

A. Gocalinska

Peer-reviewed journal • Wettability and ""petal effect"" of GaAs native oxides , J APPL PHYS, 110(3), 3431

J.F. Godsell

Peer-reviewed journal • An ac susceptibility study in capped Ni/Ni(OH)(2) core-shell nanoassemblies: dual peak observations, J PHYS D APPL PHYS, 44(32), 32500

J.C. Greer

Peer-reviewed journal • Variational method with scattering boundary conditions imposed by the Wigner distribution , PHYS REV B, 83(24), 24541

M.E. Grillo

Peer-reviewed journal • Native defects in hexagonal beta-Si3N4 studied using density functional theory calculations, PHYS REV B, 83(8), 8520

R. Harboe-Sorensen

Peer-reviewed journal • The Technology Demonstration Module On-Board PROBA-II , IEEE T NUCL SCI, 58(3), 1001–1007

S.B. Healy

Peer-reviewed journal • Theoretical Investigation of Anisotropic Gain Mechanisms in InGaAsP-Based 1.5-mu m Quantum Dash Lasers , IEEE J QUANTUM ELECT, 46(5

P. Heinricht

Peer-reviewed journal • Fast Wavelength Switching of a Dual-Contact Two-Color Semiconductor Laser With Current Modulation, IEEE PHOTONIC TECH L, 23(8), 513–51 Return to President’s Report • Bistability in an injection locked two color laser with dual injection , APPL PHYS LETT, 99, 1110 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxx

G. Herzog

Peer-reviewed journal • Sensing via voltammetric ion-transfer at an aqueous-organogel micro-interface array, SENSOR LETT, 9(2), 721–72 • Haemoglobin unfolding studies at the liquid liquid interface, ELECTROCHEM COMMUN, 13(7), 723–72

• Development of microelectrochemical sensors and portable instrumentation for the remote sensing of pollutants in port waters, Delegate handbook, 1, 5

D. Iacopino

Peer-reviewed journal • Reversible modulation of photoluminescence from conjugated polymer nanotubes by incorporation of photochromic spirooxazine molecules , CHEM COMMUN, 47(32), 9170–917

S.K. Ibrahim

Peer-reviewed journal • Novel synchronous DPSK optical regenerator based on a feed-forward based carrier extraction scheme, OPT EXPRESS, 19(10), 9445–9452 • Novel real-time homodyne coherent receiver using a feed-forward based carrier extraction scheme for phase modulated signals , OPT EXPRESS, 19(9), 8320–8326

A. Iwaszuk

Peer-reviewed journal • Reactivity of sub 1 nm supported clusters: (TiO2)(n) clusters supported on rutile TiO2 (110), PHYS CHEM CHEM PHYS, 13(11), 4963 — 497

• Electronic Structure and Reactivity of Ce- and Zr-Doped TiO2: Assessing the Reliability of Density Functional Theory Approaches, J PHYS CHEM C, 115(26), 12995–1300 • Charge compensation in trivalent cation doped bulk rutile TiO2, J PHYS-CONDENS MAT, 23(33), 33420

D. Jang

Peer-reviewed journal

Return to • Low-frequency noise in junctionless multigate transistors, APPL PHYS LETT, 98, 13350 President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxi

S.J. Jung

Peer-reviewed journal • Surface Energy Driven Agglomeration and Growth of Single Crystal Metal Wires, NANO LETT, 11(3), 1294–1299

B. Kelleher

Peer-reviewed journal • Excitability in optically injected semiconductor lasers: Contrasting quantum-well- and quantum-dot-based devices, PHYS REV E, 83(2), 026207 part • Dimensional signature on noise-induced excitable statistics in an optically injected semiconductor laser, PHYS REV E, 84, 2620

H.M. Khalil

Peer-reviewed journal • Nonlinear dynamics of non-equilibrium holes in p-type modulation-doped GaInNAs/GaAs quantum wells , NANOSCALE RES LETT, 6, 19

J.M. Lamy

Peer-reviewed journal • Monolithic excitation and manipulation of surface plasmon polaritons on a vertical cavity surface emitting laser , APPL PHYS A-MATER, 103(3), 665–66

K.H. Lee

Peer-reviewed journal • Integration of AlInGaAs-MQW Fabry-Perot Lasers With Emission at Two Wavelength Ranges via Quantum-Well Intermixing , IEEE PHOTONIC TECH L, 23(1), 27–2

C.W. Lee

Peer-reviewed conference proceedings • Short-Channel Junctionless Nanowire Transistors, JJAP Special Issu

S.P. Li

Return to Peer-reviewed journal President’s Report • Surface Topography Engineered Anisotropy in Ferromagnetic Films , IEEE T MAGN, 46(7), 1559–156 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxii

S. Li

Peer-reviewed journal • Self-aligned high-resolution printed polymer transistors, ADV MATER, 23(35), 4107–1

B.L. Liang

Peer-reviewed journal • Lateral interdot carrier transfer in an InAs quantum dot cluster grown on a pyramidal GaAs surface, NANOTECHNOLOGY, 22(5), 5570

R.D. Long

Peer-reviewed journal • Charged Defect Quantiﬁcation in Pt/Al2O3/In0.53Ga0.47As/InP MOS Capacitors, J ELECTROCHEM SOC, 158(5), G103-G107

O. Marquardt

Peer-reviewed journal • Growth process, characterization, and modeling of electronic properties of coupled InAsSbP nanostructures , J APPL PHYS, 110(4), 4370

I. Mathews

Peer-reviewed conference proceedings • Mechanically Stacked Solar Cells for Concentrator Photovoltaics, Renewable Energy and Power Quality Journal, 9, 62

E. McGibney

Peer-reviewed journal • The High Frequency Electrical Properties of Interconnects on a Flexible Polyimide Substrate Including the Effects of Humidity, IEEE T COMPON PACK T,

M.G. McGrath

Peer-reviewed journal • Determination of parameters for successful spray coating of silicon microneedle arrays, INT J PHARM, 415, 140–14 Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxiii

L. McManus

Peer-reviewed journal • Raman spectroscopic monitoring of the osteogenic differentiation of human mesenchymal stem cells, ANALYST, 136, 247

J. McPhillips

Peer-reviewed journal • Plasmonic Sensing Using Nanodome Arrays Fabricated by Soft Nanoimprint Lithography, J PHYS CHEM C, 115(31), 15234 1523

L.O. Mereni

Peer-reviewed journal • Physical properties of highly uniform InGaAs pyramidal quantum dots with GaAs barriers: Fine structure splitting in pre-patterned substrates , SUPERLATTICE MICROST, 49(3), 279–28

W. Messina

Peer-reviewed conference proceedings • Nano-structured sensor arrays for toxicity monitoring of cells relevant to human health, Proceedings of nanobio europe cork 2011, 1, poster 4

M. Milojevic

Peer-reviewed journal • In-situ characterization of Ga(2)O passivation of In(0.53)Ga(0.47)As prior to high-k dielectric atomic layer deposition, APPL PHYS LETT, 99(4), 4290

M. Mincica

Peer-reviewed journal • CMOS UWB Multiplier , IEEE T CIRCUITS-II, 58(9), 570–574

E. Miranda

Peer-reviewed journal Return to • Application of the quadrat counts method to the analysis of the spatial breakdown spots pattern in metal gate/MgO/InP structures , President’s Report MICROELECTRON ENG, 88(4), 448–45 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxiv

M. Modreanu

Peer-reviewed journal • Investigation of bulk defects in amorphous and crystalline HfO2 thin ﬁlms, MICROELECTRON ENG, 88, 1499 150 • Optical and microstructural properties of p-type Ba doped SrCu2O2 thin ﬁlms formed by Pulsed Laser Deposition, Proceedings of E’MRS Spring Meetin

• Investigation of bulk defects in amorphous and crystalline HfO2 thin ﬁlms, Proceedings of INFOS 201

P. Mokarian-Tabari

Peer-reviewed journal • Cyclical ""Flipping"" of Morphology in Block Copolymer Thin Films, ACS NANO, 5(6), 4617–4623

C. Moldovan

Peer-reviewed journal • Molecular dynamics of the ""hydrophobic patch"" that immobilizes hydrophobin protein HFBII on silicon , J MOL MODEL, 17(9), 2227–223

S. Monaghan

Peer-reviewed journal • Electrical analysis of three-stage passivated In0.53Ga0.47As capacitors with varying HfO2 thicknesses and incorporating an Al2O3 interface control layer, J VAC SCI TECHNOL B, 29(1), 01AB0

W. Moujahid

Peer-reviewed journal • Microelectrochemical Systems on Silicon Chips for the Detection of Pollutants in Seawater, ELECTROANAL, 23(1), 147–15

S.N.A. Murad

Peer-reviewed conference proceedings • Optimisation and scaling of interfacial GeO2 layers for high-k gate stacks on germanium, Proceedings of ICFSI-1

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxv

F. Murphy-Armando

Peer-reviewed journal • Effect of strain on the deformation potentials in Ge-like SiGe, CHINESE J PHYS, 49(1) Sp Iss, 209–22 • Giant enhancement of n-type carrier mobility in highly strained germanium nanostructures , J APPL PHYS, 109, 11370

• Effect of strain on the deformation potentials in Ge-like SiGe, CHINESE JOURNAL OF PHYSICS, 49,

L.C. Nagle

Peer-reviewed journal • Nanoporous Gold Catalyst for Direct Ammonia Borane Fuel Cells, J ELECTROCHEM SOC, 158(7), B772-B778

• Nanoporous gold anode catalyst for direct borohydride fuel cell, INT J HYDROGEN ENERG, 36, 10319–1032

A.N. Nazarov

Peer-reviewed journal • Random telegraph-signal noise in junctionless transistors, APPL PHYS LETT, 98(9), 9211 • Field-effect mobility extraction in nanowire ﬁeld-effect transistors by combination of transfer characteristics and random telegraph noise measurements, APPL PHYS LETT, 99, 073502– • Extraction of ﬂat-band voltage and parasitic resistance in junctionless MuGFETs, Proceedings of EUROSOI 2011, VII Workshop of the Thematic Network on Silicon On Insulator Technology, Devices and Circuits, 53–5

• Extraction of Channel Mobility in Nanowire MOSFETs Using Id(Vg) Characteristics and Random Telegraph Noise Amplitude, Proceedings of Ultimate Integration on Silicon Conference (ULIS), 107–10

A. Nazarov

Book • emiconductor-On-Insulator Materials for Nanoelectronics Application

L.E. Nelson

Peer-reviewed journal Return to • Experimental comparison of coherent polarization-switched QPSK to polarization-multiplexed QPSK for 10 x 100 km WDM transmission, OPT President’s Report EXPRESS, 19(11), 10849–10856 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxvi

M. Nolan

Peer-reviewed journal • Charge Compensation and Ce3+ Formation in Trivalent Doping of the CeO2(110) Surface: The Key Role of Dopant Ionic Radius, J PHYS CHEM C, 115(14), 6671–668 • Hybrid density functional theory description of N- and C-doping of NiO , J CHEM PHYS, 134 (22), 22470 • Enhanced oxygen vacancy formation in ceria (111) and (110) surfaces doped with divalent cations , J MATER CHEM, 21, 9160–9168

M.G. Nolan

Peer-reviewed journal • The characterisation of aerosol assisted CVD conducting, photocatalytic indium doped zinc oxide ﬁlms, J PHOTOCH PHOTOBIO A, 219(1

M. Nolan

Peer-reviewed journal • Surface modiﬁcation of TiO(2) with metal oxide nanoclusters: a route to composite photocatalytic materials, CHEM COMMUN, 47(30), 8617–861 • Electronic coupling in iron oxide-modiﬁed TiO2 leads to a reduced band gap and charge separation for visible light active photocatalysis, PHYS CHEM CHEM PHYS, 13, 18194–1819

S. OConnell

Workshop proceedings • Remote Electricity Actuation and Monitoring Mote, Proc: HOBSENSE: 1st IEEE DCOSS Workshop on Building Intelligence through IPv6 Sensing System

E. O’Connor

Peer-reviewed journal • A systematic study of (NH4)(2)S passivation (22

J. ODonoghue

Peer-reviewed journal Return to President’s Report • Modiﬁed Early Warning Scorecard: The Role of Data/Information Quality within the Decision Making Process, The Electronic Journal of Information Systems Evaluation , 14, Iss UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxvii

S. O’Driscoll

Peer-reviewed journal • The morphology and structure of PS-b-P4VP block copolymer ﬁlms by solvent annealing: effect of the solvent parameter , POLYM ADVAN TECHNOL, 22(6), 915–92

B. OFlynn

Workshop proceedings • The Tyndall Mote — A Modular Platform for Wireless Sensor Network Technology Development, Proc. NanoBio Europe 201

C. OMahony

Peer-reviewed conference proceedings • Ultrasharp Silicon Microneedles for Painless Percutaneous Penetration, Proc. Nanoweek Conference 2011, 17

D. O’Mahony

Peer-reviewed journal • Thermal stability of SiC Schottky diode anode and cathode metalisations after 1000 h at 350 degrees C, MICROELECTRON RELIAB, 51, 90

C. O’Mahony

Unreviewed conference proceedings • Ultrasharp Silicon Microneedles for Painless Percutaneous Penetration, Nanoweek Conference 2011: Nanotechnology: Research Excellence & Commercial Opportunities, • Silicon Microneedles: Technology and Applications, Proc. NanoBio Europe 2011,

• Microneedles: A Revolution in Transdermal Delivery?, UCC Medical Research New

A. ORiordan

Peer-reviewed journal • Dielectrophoretic self-assembly of polarized light emitting poly(9,9-dioctylﬂuorene) nanoﬁbre arrays, NANOTECHNOLOGY, 22 (10), 105602 (8pp

Return to President’s Report UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxviii

R. Pagano

Peer-reviewed journal • Above Threshold Estimation of Alpha (Henry) Parameter in Stripe Lasers Using Near- and Far-Field Intensity Measurements, IEEE J QUANTUM ELECT, 47(4), 439 — 446 • Two-dimensional carrier density distribution inside a high power tapered laser diode , APPL PHYS LETT, 98(22), 22111

M. Palizdar

Peer-reviewed conference proceedings • Synthesis of platelets Bi5Fe0.5Co0.5Ti3O15 via the molten salt method, ISAF-ECAPD 2010 Proceeding

A. Paschero

Peer-reviewed conference proceedings • Cytotoxicity monitoring of cells using a multi-parameter ﬂuidic platform , Environ 2011, 17 • Transparent conductive impedance based interdigitated electrodes to monitor cell behaviour, Proceedings of NanoBio Europe Cork 2011, poster 3

M.M. Pejovic

Peer-reviewed journal • RADIATION-SENSITIVE FIELD EFFECT TRANSISTOR RESPONSE TO GAMMA-RAY IRRADIATION, NUCL TECHNOL RADIAT, 26(1), 25–3

E. Pelucchi

Peer-reviewed journal • Decomposition, diffusion, and growth rate anisotropies in self-limited proﬁles during metalorganic vapor-phase epitaxy of seeded nanostructures, PHYS REV B, 83(20), 20540

A. Perl

Peer-reviewed journal • Gradient-driven motion of multivalent ligand molecules along a surface functionalized with multiple receptors, NAT CHEM, 3, 317–32 Return to President’s Report • Gradient-driven motion of multivalent ligand molecules along a surface functionalized with multiple receptors , NAT CHEM, 3(4), 317–322 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxix

C.F. Phelan

Peer-reviewed journal • Two-photon polymerisation of novel shapes using a conically diffracted femtosecond laser beam , OPT COMMUN, 284(14), 3571–357

J. Pulka

Peer-reviewed journal • Ultrafast Gain and Refractive Index Dynamics in AlInAs/AlGaAs Quantum Dot Based Semiconductor Optical Ampliﬁers Operating at 800 nm, IEEE J QUANTUM ELECT, 47(8), 1094–110

W. Quinn

Peer-reviewed journal • Design and performance analysis of an embedded wireless sensor for monitoring concrete curing and structural health, Journal of Civil Structural Health Monitoring, Volume 1, Numbers 1–2, 47–5

M. Radziunas

Peer-reviewed journal • Pulse Broadening in Quantum-Dot Mode-Locked Semiconductor Lasers: Simulation, Analysis, and Experiments , IEEE J QUANTUM ELECT, 47(7), 935–94

D. Raﬁque

Peer-reviewed journal • Digital back-propagation for spectrally efficient WDM 112 Gbit/s PM m-ary QAM transmission, OPT EXPRESS, 19(6), 5219–522 • Impact of signal-ASE four-wave mixing on the effectiveness of digital back-propagation in 112 Gb/s PM-QPSK systems, OPT EXPRESS, 19(4), 3449–3454 • Nonlinear Penalties in Dynamic Optical Networks Employing Autonomous Transponders , OPT EXPRESS, 19(10), 9044–9049 • Compensation of intra-channel nonlinear fibre impairments using simplified digital back-propagation algorithm , OPT EXPRESS, 19(10), 9453–9460 • Compensation of nonlinear fibre impairments in coherent systems employing spectrally efficient modulation formats, IEICE T COMMUN, E94B (7), 1815–182 Return to President’s Report • Nonlinear and ROADM induced penalties in 28 Gbaud dynamic optical mesh networks employing electronic signal processing , OPT EXPRESS, 19(18), 16739–1674 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxx

• Nonlinearity compensation in multi-rate 28 Gbaud WDM systems employing optical and digital techniques under diverse link conﬁgurations , OPT EXPRESS, 19(18), 16919–16926 • Digital back-propagation for spectrally efﬁcient WDM 112 Gbit/s PM m-ary QAM transmission, Optics Express , 19(6), 5219–522

• Impact of signal-ASE four-wave mixing on the effectiveness of digital back-propagation in 112 Gb/s PM-QPSK systems, Optics Express, 19(4), 3449–345

P. Razavi

Peer-reviewed conference proceedings • Comparison of the switching speed in junctionless and accumolation-mode gate-all-around nanowire transistors, Proceedings of EUROSOI 2011, VII Workshop of the Thematic Network on Silicon On Insulator Technology, Devices and Circuits, 43–4

• Performance Investigation of Short-channel Junctionless Multigate Transistors, Proceedings of Ultimate Integration on Silicon Conference (ULIS), 122–12

K.M. Razeeb

Book chapter • Nanowire-Polymer Nanocomposites as Thermal Interface Material, Advances in Nanocomposites — Synthesis, Characterization and Industrial Applications, 30,

N. Rebrova

Peer-reviewed journal • Optically injected mode-locked laser , PHYS REV E, 83(6), 066202 Part

A. Salaun

Peer-reviewed journal • Nucleation and Chemical Transformation of RuO2 Films Grown on (100) Si Substrates by Atomic Layer Deposition , CHEM VAPOR DEPOS, 17(4–6), 114–12

M.D. Scanlon

Peer-reviewed journal Return to • Enhanced Electroanalytical Sensitivity via Interface Miniaturisation: Ion Transfer Voltammetry at an Array of Nanometre Liquid-Liquid President’s Report Interfacesm, ELECTROANAL, 23(4), 1023–102 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxxi

R. Schmidt

Peer-reviewed journal • van der Waals interaction of a neutral atom with the surface of a metal or dielectric nanosphere, J PHYS B-AT MOL OPT, 44(1), 1500 S. Schulz

Peer-reviewed journal • Built-in ﬁelds in stacked InGaN/GaN quantum dots, PHYS STATUS SOLIDI A, 208(7), 1551–155 • Tight-binding model for the electronic and optical properties of nitride-based quantum dots, PHYS STATUS SOLIDI B, 248, 185 • Symmetry-adapted calculations of strain and polarization ﬁelds in (111)-oriented zinc-blende quantum dots, PHYS REV B, 84, 12531 J. Seebeck

Peer-reviewed journal • Optical spectra of nitride quantum-dot systems: From tight-binding states to many-body effects, PHYS STATUS SOLIDI B, 248, 187 M. Seiﬁkar

Peer-reviewed journal • Analysis of band-anticrossing model in GaNAs near localised states , PHYS STATUS SOLIDI B, 248(5), 1176–1179 K. Shi

Peer-reviewed journal • Characterization of a tunable three-section slotted Fabry-Perot laser for advanced modulation format optical transmission, OPT COMMUN, 284(6), 1616–1621 A.M. Sonnet

Peer-reviewed journal • On the calculation of effective electric ﬁeld in In0.53Ga0.47As surface channel metal-oxide-semiconductor ﬁeld-effect-transistors , APPL PHYS LETT, 98(19), 19350 E. Sooudi

Peer-reviewed journal Return to President’s Report • Observation of Harmonic-Mode-Locking in a Mode-Locked InAs/InP-Based Quantum-Dash Laser With CW Optical Injection, IEEE PHOTONIC TECH L, 23(9), 549–55 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxxii

A. Strozecka

Peer-reviewed journal • Electron-induced excitation of vibrations of Ce atoms inside a C-80 cage , PHYS REV B, 83(16), 16541

S. Sygletos

Peer-reviewed journal • Phase Synchronization Scheme for a practical Phase Sensitive Ampliﬁer of ASK-NRZ Signals , OPT EXPRESS, 19(13), 12384–12391

S. Tanriseven

Peer-reviewed journal • Low effective surface recombination in In(Ga)As/GaAs quantum dot diodes, J APPL PHYS, 110(3), 3450

J. Teubert

Peer-reviewed journal • Evidence of localized boron impurity states in (B,Ga,In)As in magnetotransport experiments under hydrostatic pressure, PHYS REV B, 83(3), 3520

D. Thompson

Peer-reviewed journal • Electronic structure calculations and physicochemical experiments quantify the competitive liquid ion association and probe stabilisation effects for nitrobenzospiropyran in phosphonium-based ionic liquids, PHYS CHEM CHEM PHYS, 13(13), 6156–616

D. Trevisoli

Peer-reviewed conference proceedings • Analytical Model for the Threshold Voltage of Junctionless Nanowire Transistors, Proceedings of EUROSOI 2011, VII Workshop of the Thematic Network on Silicon On Insulator Technology, Devices and Circuits, 67–6

K. Twomey

Peer-reviewed journal • Characterization of the Electrochemical Behavior of Gastrointestinal Fluids Using a Multielectrode Sensor Probe, IEEE T BIO-MED ENG, 58(9), Return to 2521–252 President’s Report • Analytical tools for detection and monitoring of biological contamination in water, CASi 2011 Proceeding UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxxiii

M. Usman

Peer-reviewed journal • Experimental and theoretical study of polarization-dependent optical transitions in InAs quantum dots at telecommunication-wavelengths (1300–1500 nm), J APPL PHYS, 109(10), 10451 • Quantitative excited state spectroscopy of a single InGaAs quantum dot molecule through multi-million-atom electronic structure calculations, NANOTECHNOLOGY, 22(31), 31570

M.P. Vaughan

Peer-reviewed journal • Modelling and direct measurement of the density of states in GaAsN , PHYS STATUS SOLIDI A, 248(5), 1167–1171

O. Vermesan

Book chapter • Robust Design for High Temperature High Voltage Applications Analog Circuit Design: Robust Design, Sigma Delta Converters, RFID, 5,

D. Vernardou

Peer-reviewed journal • A study of the electrochemical performance of vanadium oxide thin ﬁlms grown by atmospheric pressure chemical vapour deposition , SOL ENERG MAT SOL C, 95(10), 2842–284

M.J. Walsh

Peer-reviewed journal • On localisation with robust power control for safety critical wireless sensor networks, Journal of Control Theory and Applications , • An Antiwindup approach to Power Controller Switching in an Ambient Healthcare Network, International Journal of Ambient Computing and Intelligence, 3, Iss. 2, 34–5

M. Walsh

Peer-reviewed conference proceedings Return to • A benchmark comparison between reconﬁgurable, intelligent and autonomous wireless inertial measurement and photonic technologies in President’s Report rehabilitation, Proc. The 3rd European Conference on Technically Assisted Rehabilitatio UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxxiv

• Precision Biomechanical Motion Tracking and Throw Characterisation in Professional Darts, Proc. of 17th Annual Conference of the Bioengineering Section of the Royal Academy of Medicine in Irelan • A benchmark comparison between reconﬁgurable, intelligent and autonomous wireless inertial measurement and photonic technologies in rehabilitation, Proc. 3rd European Conference on Technically Assisted Rehabilitation • A medical study on wireless inertial measurement technology as a tool for identifying patients at risk of death or imminent clinical deterioration, Proc. Pervasive Health 201 • A Multi-Technology approach to identifying the reasons for Lateral Drift for Professional and Recreational Darts Players, Proc. Body Sensor Networks (BSN 2011 • PRECISION BIOMECHANICAL MOTION TRACKING AND THROW CHARACTERISATION IN PROFESSIONAL DARTS, Proc. Annual Conference of the Bioengineering Section of the Royal Academy of Medicine in Ireland, Bioengineering In Irelan • Addressing Non-linear Hardware Limitations and Extending Network Coverage Area for Power Aware Wireless Sensor Networks, Wireless Sensor Networks, 4, • A PRELIMINARY STUDY ON HOW FATIGUE AFFECTS SCORING AVERAGE IN PROFESSIONAL DARTS, Proc. Annual Symposium of the International Society of Biomechanics in Sports (ISBS2011

W.S. Wang

Peer-reviewed conference proceedings • Hybrid Energy Storage for Energy Harvesting Powered Wireless Sensor Networks, Proc. SMART SYSTEMS INTEGRATION 2011,

A. Watkins

Peer-reviewed journal • Single-input spherical microbubble resonator , OPT LETT, 36(11), 2113–211

R.P. Webb

Peer-reviewed journal • Phase discrimination and simultaneous frequency conversion of the orthogonal components of an optical signal by four-wave mixing in an SOA, OPT EXPRESS, 19(21), 20015–20022

R. Weerasuriya

Peer-reviewed journal Return to President’s Report • Comparison of Frequency Symmetric Signal Generation From a BPSK Input Using Fiber and Semiconductor-Based Nonlinear Elements , IEEE PHOTONIC, TECH L, 23(10), 651–653 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxxv

R.J. Winﬁeld

Peer-reviewed journal • Two-photon polymerization of an epoxy-acrylate resin material system, APPL SURF SCI, 257(12), 5389–5392

C.S. Wong

Peer-reviewed journal • Multi-technique characterisation of MOVPE-grown GaAs on Si, MICROELECTRON ENG, 88(4), 472–47

J. Xu

Peer-reviewed journal • Ultra Long Metal Nanowire Arrays on Solid Substrate with Strong Bonding, NANOSCALE RES LETT, 6, 52

R. Yan

Peer-reviewed journal • Investigation of high-performance sub-50 nm junctionless nanowire transistors, MICROELECTRON RELIAB, 51(7), 1166–117

H. Yang

Unreviewed conference proceedings • High-speed and high-power InGaAs/InP photodiode, Proc of IPRM 201

R. Yu

Peer-reviewed journal • Characterization of a junctionless diode, APPL PHYS LETT, 99, 1350

P.F. Zhang

Peer-reviewed journal • The Structural and Electrical Properties of the SrTa2O6/In0.53Ga0.47As/InP System, MICROELECTRON ENG, 88, 1054–105

J. Zhao

Return to Peer-reviewed journal President’s Report • Demonstration of 10 Gbit/s transmission over 900 km SMF with < 400 ns adaptation time using full-ﬁeld EDC, ELECTRON LETT, 47(12), 711–71 UCC Research Publications 2011–2012 | Research Centres and Institutes cccxxxvi

J.A. Zhao

Peer-reviewed journal • Symbol Synchronization Exploiting the Symmetric Property in Optical Fast OFDM, IEEE PHOTONIC TECH L, 23(9), 594–596

J. Zhao

Peer-reviewed journal • Electronic Impairment Mitigation in Optically Multiplexed Multicarrier Systems, J LIGHTWAVE TECHNOL, 29(3), 278–29

• Offset-QAM based coherent WDM for spectral efﬁciency enhancement, OPT EXPRESS, 19 (15), 14617–1463

L. Zheng

Peer-reviewed journal • Impact study of substrate materials on wireless sensor node RF performance, Mater. Sci. Forum , 663–665, 455–46 • Electrical Characterization of the Embedded Capacitance Material and its Application in Power Supply Decoupling, Proc. 61st ECTC, 2011, 6

Return to President’s Report