6.701 Introduction to Nanoelectronics, Part 6: the Electronic Structure Of
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Atomic Orbitals
Visualization of Atomic Orbitals Source: Robert R. Gotwals, Jr., Department of Chemistry, North Carolina School of Science and Mathematics, Durham, NC, 27705. Email: [email protected]. Copyright ©2007, all rights reserved, permission to use for non-commercial educational purposes is granted. Introductory Readings Where are the electrons in an atom? There are a number of Models - a description of models that look to describe the location and behavior of some physical object or electrons in atoms. It is important to know this information, as behavior in nature. Models it helps chemists to make statements and predictions about are often mathematical, describing the behavior of how atoms will react with other atoms to form molecules. The some event. model one chooses will oftentimes influence the types of statements one can make about the behavior – that is, the reactivity – of an atom or group of atoms. Bohr model - states that no One model, the Bohr model, describes electrons as small two electrons in an atom can billiard balls, rotating around the positively charged nucleus, have the same set of four much in the way that planets quantum numbers. orbit around the Sun. The placement and motion of electrons are found in fixed and quantifiable levels called orbits, Orbits- where electrons are or, in older terminology, shells. believed to be located in the There are specific numbers of Bohr model. Orbits have a electrons that can be found in fixed amount of energy, and are identified with the each orbit – 2 for the first orbit, principle quantum number 8 for the second, and so forth. -
Effective Hamiltonians Derived from Equation-Of-Motion Coupled-Cluster
Effective Hamiltonians derived from equation-of-motion coupled-cluster wave-functions: Theory and application to the Hubbard and Heisenberg Hamiltonians Pavel Pokhilkoa and Anna I. Krylova a Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482 Effective Hamiltonians, which are commonly used for fitting experimental observ- ables, provide a coarse-grained representation of exact many-electron states obtained in quantum chemistry calculations; however, the mapping between the two is not triv- ial. In this contribution, we apply Bloch's formalism to equation-of-motion coupled- cluster (EOM-CC) wave functions to rigorously derive effective Hamiltonians in the Bloch's and des Cloizeaux's forms. We report the key equations and illustrate the theory by examples of systems with electronic states of covalent and ionic characters. We show that the Hubbard and Heisenberg Hamiltonians are extracted directly from the so-obtained effective Hamiltonians. By making quantitative connections between many-body states and simple models, the approach also facilitates the analysis of the correlated wave functions. Artifacts affecting the quality of electronic structure calculations such as spin contamination are also discussed. I. INTRODUCTION Coarse graining is commonly used in computational chemistry and physics. It is ex- ploited in a number of classic models serving as a foundation of modern solid-state physics: tight binding[1, 2], Drude{Sommerfeld's model[3{5], Hubbard's [6] and Heisenberg's[7{9] Hamiltonians. These models explain macroscopic properties of materials through effective interactions whose strengths are treated as model parameters. The values of these pa- rameters are determined either from more sophisticated theoretical models or by fitting to experimental observables. -
Introduction to the Physical Properties of Graphene
Introduction to the Physical Properties of Graphene Jean-No¨el FUCHS Mark Oliver GOERBIG Lecture Notes 2008 ii Contents 1 Introduction to Carbon Materials 1 1.1 TheCarbonAtomanditsHybridisations . 3 1.1.1 sp1 hybridisation ..................... 4 1.1.2 sp2 hybridisation – graphitic allotopes . 6 1.1.3 sp3 hybridisation – diamonds . 9 1.2 Crystal StructureofGrapheneand Graphite . 10 1.2.1 Graphene’s honeycomb lattice . 10 1.2.2 Graphene stacking – the different forms of graphite . 13 1.3 FabricationofGraphene . 16 1.3.1 Exfoliatedgraphene. 16 1.3.2 Epitaxialgraphene . 18 2 Electronic Band Structure of Graphene 21 2.1 Tight-Binding Model for Electrons on the Honeycomb Lattice 22 2.1.1 Bloch’stheorem. 23 2.1.2 Lattice with several atoms per unit cell . 24 2.1.3 Solution for graphene with nearest-neighbour and next- nearest-neighour hopping . 27 2.2 ContinuumLimit ......................... 33 2.3 Experimental Characterisation of the Electronic Band Structure 41 3 The Dirac Equation for Relativistic Fermions 45 3.1 RelativisticWaveEquations . 46 3.1.1 Relativistic Schr¨odinger/Klein-Gordon equation . ... 47 3.1.2 Diracequation ...................... 49 3.2 The2DDiracEquation. 53 3.2.1 Eigenstates of the 2D Dirac Hamiltonian . 54 3.2.2 Symmetries and Lorentz transformations . 55 iii iv 3.3 Physical Consequences of the Dirac Equation . 61 3.3.1 Minimal length for the localisation of a relativistic par- ticle ............................ 61 3.3.2 Velocity operator and “Zitterbewegung” . 61 3.3.3 Klein tunneling and the absence of backscattering . 61 Chapter 1 Introduction to Carbon Materials The experimental and theoretical study of graphene, two-dimensional (2D) graphite, is an extremely rapidly growing field of today’s condensed matter research. -
Chemical Bonding & Chemical Structure
Chemistry 201 – 2009 Chapter 1, Page 1 Chapter 1 – Chemical Bonding & Chemical Structure ings from inside your textbook because I normally ex- Getting Started pect you to read the entire chapter. 4. Finally, there will often be a Supplement that con- If you’ve downloaded this guide, it means you’re getting tains comments on material that I have found espe- serious about studying. So do you already have an idea cially tricky. Material that I expect you to memorize about how you’re going to study? will also be placed here. Maybe you thought you would read all of chapter 1 and then try the homework? That sounds good. Or maybe you Checklist thought you’d read a little bit, then do some problems from the book, and just keep switching back and forth? That When you have finished studying Chapter 1, you should be sounds really good. Or … maybe you thought you would able to:1 go through the chapter and make a list of all of the impor- tant technical terms in bold? That might be good too. 1. State the number of valence electrons on the following atoms: H, Li, Na, K, Mg, B, Al, C, Si, N, P, O, S, F, So what point am I trying to make here? Simply this – you Cl, Br, I should do whatever you think will work. Try something. Do something. Anything you do will help. 2. Draw and interpret Lewis structures Are some things better to do than others? Of course! But a. Use bond lengths to predict bond orders, and vice figuring out which study methods work well and which versa ones don’t will take time. -
Electron Configurations, Orbital Notation and Quantum Numbers
5 Electron Configurations, Orbital Notation and Quantum Numbers Electron Configurations, Orbital Notation and Quantum Numbers Understanding Electron Arrangement and Oxidation States Chemical properties depend on the number and arrangement of electrons in an atom. Usually, only the valence or outermost electrons are involved in chemical reactions. The electron cloud is compartmentalized. We model this compartmentalization through the use of electron configurations and orbital notations. The compartmentalization is as follows, energy levels have sublevels which have orbitals within them. We can use an apartment building as an analogy. The atom is the building, the floors of the apartment building are the energy levels, the apartments on a given floor are the orbitals and electrons reside inside the orbitals. There are two governing rules to consider when assigning electron configurations and orbital notations. Along with these rules, you must remember electrons are lazy and they hate each other, they will fill the lowest energy states first AND electrons repel each other since like charges repel. Rule 1: The Pauli Exclusion Principle In 1925, Wolfgang Pauli stated: No two electrons in an atom can have the same set of four quantum numbers. This means no atomic orbital can contain more than TWO electrons and the electrons must be of opposite spin if they are to form a pair within an orbital. Rule 2: Hunds Rule The most stable arrangement of electrons is one with the maximum number of unpaired electrons. It minimizes electron-electron repulsions and stabilizes the atom. Here is an analogy. In large families with several children, it is a luxury for each child to have their own room. -
Lecture 3. the Origin of the Atomic Orbital: Where the Electrons Are
LECTURE 3. THE ORIGIN OF THE ATOMIC ORBITAL: WHERE THE ELECTRONS ARE In one sentence I will tell you the most important idea in this lecture: Wave equation solutions generate atomic orbitals that define the electron distribution around an atom. To start we need to simplify the math by switching to spherical polar coordinates (everything = spherical) rather than Cartesian coordinates (everything = at right angles). So the wave equations generated will now be of the form ψ(r, θ, Φ) = R(r)Y(θ, Φ) where R(r) describes how far out on a radial trajectory from the nucleus you are. r is a little way out and is small Now that we are extended radially on ψ, we need to ask where we are on the sphere carved out by R(r). Think of blowing up a balloon and asking what is going on at the surface of each new R(r). To cover the entire surface at projection R(r), we need two angles θ, Φ that get us around the sphere in a manner similar to knowing the latitude & longitude on the earth. These two angles yield Y(θ, Φ) which is the angular wave function A first solution: generating the 1s orbit So what answers did Schrodinger get for ψ(r, θ, Φ)? It depended on the four quantum numbers that bounded the system n, l, ml and ms. So when n = 1 and = the solution he calculated was: 1/2 -Zr/a0 1/2 R(r) = 2(Z/a0) *e and Y(θ, Φ) = (1/4π) . -
Arxiv:1601.03499V1 [Quant-Ph] 14 Jan 2016 Networks [23]
Non-Hermitian tight-binding network engineering Stefano Longhi Dipartimento di Fisica, Politecnico di Milano and Istituto di Fotonica e Nanotecnologie del Consiglio Nazionale delle Ricerche, Piazza L. da Vinci 32, I-20133 Milano, Italy We suggest a simple method to engineer a tight-binding quantum network based on proper coupling to an auxiliary non-Hermitian cluster. In particular, it is shown that effective complex non-Hermitian hopping rates can be realized with only complex on-site energies in the network. Three applications of the Hamiltonian engineering method are presented: the synthesis of a nearly transparent defect in an Hermitian linear lattice; the realization of the Fano-Anderson model with complex coupling; and the synthesis of a PT -symmetric tight-binding lattice with a bound state in the continuum. PACS numbers: 03.65.-w, 11.30.Er, 72.20.Ee, 42.82.Et I. INTRODUCTION self-sustained emission in semi-infinite non-Hermitian systems at the exceptional point [29], optical simulation of PT -symmetric quantum field theories in the ghost Hamiltonian engineering is a powerful technique regime [30, 31], invisible defects in tight-binding lattices to control classical and quantum phenomena with [32], non-Hermitian bound states in the continuum [33], important applications in many areas of physics such and Bloch oscillations with trajectories in complex plane as quantum control [1{4], quantum state transfer and [34]. Previous proposals to implement complex hopping quantum information processing [5{10], quantum simu- amplitudes are based on fast temporal modulations of lation [11{13], and topological phases of matter [14{19]. complex on-site energies [31, 32], however such methods In quantum systems described by a tight-binding are rather challenging in practice and, as a matter of Hamiltonian, quantum engineering is usually aimed at fact, to date there is not any experimental demonstration tailoring and controlling hopping rates and site energies, of non-Hermitian complex couplings in tight-binding using either static or dynamic methods. -
Atomic Structure
1 Atomic Structure 1 2 Atomic structure 1-1 Source 1-1 The experimental arrangement for Ruther- ford's measurement of the scattering of α particles by very thin gold foils. The source of the α particles was radioactive radium, a rays encased in a lead block that protects the surroundings from radiation and confines the α particles to a beam. The gold foil used was about 6 × 10-5 cm thick. Most of the α particles passed through the gold leaf with little or no deflection, a. A few were deflected at wide angles, b, and occasionally a particle rebounded from the foil, c, and was Gold detected by a screen or counter placed on leaf Screen the same side of the foil as the source. The concept that molecules consist of atoms bonded together in definite patterns was well established by 1860. shortly thereafter, the recognition that the bonding properties of the elements are periodic led to widespread speculation concerning the internal structure of atoms themselves. The first real break- through in the formulation of atomic structural models followed the discovery, about 1900, that atoms contain electrically charged particles—negative electrons and positive protons. From charge-to-mass ratio measurements J. J. Thomson realized that most of the mass of the atom could be accounted for by the positive (proton) portion. He proposed a jellylike atom with the small, negative electrons imbedded in the relatively large proton mass. But in 1906-1909, a series of experiments directed by Ernest Rutherford, a New Zealand physicist working in Manchester, England, provided an entirely different picture of the atom. -
CP2K: Atomistic Simulations of Condensed Matter Systems
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2014 CP2K: Atomistic simulations of condensed matter systems Hutter, Juerg; Iannuzzi, Marcella; Schiffmann, Florian; VandeVondele, Joost Abstract: cp2k has become a versatile open-source tool for the simulation of complex systems on the nanometer scale. It allows for sampling and exploring potential energy surfaces that can be computed using a variety of empirical and first principles models. Excellent performance for electronic structure calculations is achieved using novel algorithms implemented for modern and massively parallel hardware. This review briefly summarizes the main capabilities and illustrates with recent applications thescience cp2k has enabled in the field of atomistic simulation. DOI: https://doi.org/10.1002/wcms.1159 Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-89998 Journal Article Accepted Version Originally published at: Hutter, Juerg; Iannuzzi, Marcella; Schiffmann, Florian; VandeVondele, Joost (2014). CP2K: Atomistic simulations of condensed matter systems. Wiley Interdisciplinary Reviews. Computational Molecular Science, 4(1):15-25. DOI: https://doi.org/10.1002/wcms.1159 cp2k: Atomistic Simulations of Condensed Matter Systems J¨urgHutter and Marcella Iannuzzi Physical Chemistry Institute University of Zurich Winterthurerstrasse 190 CH-8057 Zurich, Switzerland Florian Schiffmann and Joost VandeVondele Nanoscale Simulations ETH Zurich Wolfgang-Pauli-Strasse 27 CH-8093 Zurich, Switzerland December 17, 2012 Abstract cp2k has become a versatile open source tool for the simulation of complex systems on the nanometer scale. It allows for sampling and exploring potential energy surfaces that can be computed using a variety of empirical and first principles models. -
Pushing Back the Limit of Ab-Initio Quantum Transport Simulations On
1 Pushing Back the Limit of Ab-initio Quantum Transport Simulations on Hybrid Supercomputers Mauro Calderara∗, Sascha Bruck¨ ∗, Andreas Pedersen∗, Mohammad H. Bani-Hashemian†, Joost VandeVondele†, and Mathieu Luisier∗ ∗Integrated Systems Laboratory, ETH Zurich,¨ 8092 Zurich,¨ Switzerland †Nanoscale Simulations, ETH Zurich,¨ 8093 Zurich,¨ Switzerland ABSTRACT The capabilities of CP2K, a density-functional theory package and OMEN, a nano-device simulator, are combined to study transport phenomena from first-principles in unprecedentedly large nanostructures. Based on the Hamil- tonian and overlap matrices generated by CP2K for a given system, OMEN solves the Schr¨odinger equation with open boundary conditions (OBCs) for all possible electron momenta and energies. To accelerate this core operation a robust algorithm called SplitSolve has been developed. It allows to simultaneously treat the OBCs on CPUs and the Schr¨odinger equation on GPUs, taking advantage of hybrid nodes. Our key achievements on the Cray-XK7 Titan are (i) a reduction in time-to-solution by more than one order of magnitude as compared to standard methods, enabling the simulation of structures with more than 50000 atoms, (ii) a parallel efficiency of 97% when scaling from 756 up to 18564 nodes, and (iii) a sustained performance of 15 DP-PFlop/s. arXiv:1812.01396v1 [physics.comp-ph] 4 Dec 2018 1. INTRODUCTION The fabrication of nanostructures has considerably improved over the last couple of years and is rapidly ap- proaching the point where individual atoms are reliably manipulated and assembled according to desired patterns. There is still a long way to go before such processes enter mass production, but exciting applications have already been demonstrated: a low-temperature single-atom transistor [1], atomically precise graphene nanoribbons [2], or van der Waals heterostructures based on metal-dichalcogenides [3] were recently synthesized. -
An Efficient Magnetic Tight-Binding Method for Transition
An efficient magnetic tight-binding method for transition metals and alloys Cyrille Barreteau, Daniel Spanjaard, Marie-Catherine Desjonquères To cite this version: Cyrille Barreteau, Daniel Spanjaard, Marie-Catherine Desjonquères. An efficient magnetic tight- binding method for transition metals and alloys. Comptes Rendus Physique, Centre Mersenne, 2016, 17 (3-4), pp.406 - 429. 10.1016/j.crhy.2015.12.014. cea-01384597 HAL Id: cea-01384597 https://hal-cea.archives-ouvertes.fr/cea-01384597 Submitted on 20 Oct 2016 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. C. R. Physique 17 (2016) 406–429 Contents lists available at ScienceDirect Comptes Rendus Physique www.sciencedirect.com Condensed matter physics in the 21st century: The legacy of Jacques Friedel An efficient magnetic tight-binding method for transition metals and alloys Un modèle de liaisons fortes magnétique pour les métaux de transition et leurs alliages ∗ Cyrille Barreteau a,b, , Daniel Spanjaard c, Marie-Catherine Desjonquères a a SPEC, CEA, CNRS, Université Paris-Saclay, CEA Saclay, 91191 Gif-sur-Yvette, France b DTU NANOTECH, Technical University of Denmark, Ørsteds Plads 344, DK-2800 Kgs. Lyngby, Denmark c Laboratoire de physique des solides, Université Paris-Sud, bâtiment 510, 91405 Orsay cedex, France a r t i c l e i n f o a b s t r a c t Article history: An efficient parameterized self-consistent tight-binding model for transition metals using s, Available online 21 December 2015 p and d valence atomic orbitals as a basis set is presented. -
Chapter 5.1 Slides
5.1 Revising the Atomic Model > Chapter 5 Electrons In Atoms 5.1 Revising the Atomic Model 5.2 Electron Arrangement in Atoms 5.3 Atomic Emission Spectra and the Quantum Mechanical Model 1 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 5.1 Revising the Atomic Model > Energy Levels in Atoms The Bohr Model In 1913, Niels Bohr (1885–1962), a young Danish physicist and a student of Rutherford, developed a new atomic model. • He changed Rutherford’s model to incorporate newer discoveries about how the energy of an atom changes when the atom absorbs or emits light. 2 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 5.1 Revising the Atomic Model > Energy Levels in Atoms The Bohr Model Bohr proposed that an electron is found only in specific circular paths, or orbits, around the nucleus. 3 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 5.1 Revising the Atomic Model > Energy Levels in Atoms The Bohr Model Each possible electron orbit in Bohr’s model has a fixed energy. • The fixed energies an electron can have are called energy levels. • A quantum of energy is the amount of energy required to move an electron from one energy level to another energy level. 4 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 5.1 Revising the Atomic Model > Energy Levels in Atoms The Bohr Model The rungs on this ladder are somewhat like the energy levels in Bohr’s model of the atom. • A person on a ladder cannot stand between the rungs.