Biomarker Evidence for Intermittent Photic Zone Euxinia in the Aptianâ
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Basin Geochemical Evolution of the Eagle Ford and Effects On
BASIN GEOCHEMICAL EVOLUTION OF THE EAGLE FORD AND EFFECTS ON TRACE ELEMENT RELEASE A Thesis by IVAN MAULANA Submitted to the Office of Graduate and Professional Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Chair of Committee, Michael Tice Co-chair of Committee, Bruce Herbert Committee Members, Franco Marcantonio Terry Wade Head of Department, Michael Pope May 2016 Major Subject: Geology Copyright 2016 Ivan Maulana ABSTRACT The Ocean Anoxic Event 2 (OAE-2) at the Cenomanian-Turonian boundary is recognized from a carbon isotope excursion (CIE) in the Eagle Ford (EF) Group, and commonly attributed to global anoxic conditions in deeper marine settings. Whereas OAE are typically marked by widespread deposition of organic-rich shales, previous work shows diachroneity between the CIE and the organic-rich Lower EF, as well as anoxia- euxinia in the Western Interior Seaway of North America. We found evidence for periodic photic zone euxinia from an EF core, based on ratios of biomarkers and redox-sensitive trace elements. Sedimentary structures suggest depositional environments above storm wave base. Integration with a sequence-stratigraphic framework emphasizes the role of estuarine-style salinity stratification, subject to redox shifts caused by storm mixing in relatively shallow water depths. Independent zircon ages indicate that transition from the Lower to Upper EF occurs in the south before the north, consistent with a northward migration of this stratification mechanism as sea level rose. This implies that the redox states during deposition of the EF leading up to the CIE were influenced by regionally distinct mechanisms at relatively shallow water depths, instead of global anoxic conditions in deeper marine settings. -
Molecular Biogeochemistry, Lecture 8
12.158 Lecture Pigment-derived Biomarkers (1) Colour, structure, distribution and function (2) Biosynthesis (3) Nomenclature (4) Aromatic carotenoids ● Biomarkers for phototrophic sulfur bacteria ● Alternative biological sources (5) Porphyrins and maleimides Many of the figures in this lecture were kindly provided by Jochen Brocks, RSES ANU 1 Carotenoid pigments ● Carotenoids are usually yellow, orange or red coloured pigments lutein β-carotene 17 18 19 2' 2 4 6 8 3 7 9 16 1 5 lycopenelycopene 2 Structural diversity ● More than 600 different natural structures are known, ● They are derived from the C40 carotenoid lycopene by varied hydrogenation, dehydrogenation, cyclization and oxidation reaction 17 18 19 2' 2 4 6 8 3 7 9 16 1 5 lycopene neurosporene α-carotene γ -carotene spirilloxanthin siphonaxanthin canthaxanthin spheroidenone 3 Structural diversity Purple non-sulfur bacteria peridinin 7,8-didehydroastaxanthin okenone fucoxanthin Biological distribution ● Carotenoids are biosynthesized de novo by all phototrophic bacteria, eukaryotes and halophilic archaea ● They are additionally synthesized by a large variety of non-phototrophs ● Vertebrates and invertebrates have to incorporate carotenoids through the diet, but have often the capacity to structurally modifiy them 4 Carotenoid function (1) Accessory pigments in Light Harvesting Complex (LHC) (annual production by marine phytoplancton alone: 4 million tons) e.g. LH-II Red and blue: protein complex Green: chlorophyll Yellow: lycopene (2) Photoprotection (3) photoreceptors for phototropism -
Geochemical Characteristics of Late Ordovician Shales in the Upper Yangtze Platform, South China: Implications for Redox Environmental Evolution
minerals Article Geochemical Characteristics of Late Ordovician Shales in the Upper Yangtze Platform, South China: Implications for Redox Environmental Evolution Donglin Lin 1,2,3, Shuheng Tang 1,2,3,*, Zhaodong Xi 1,2,3, Bing Zhang 1,2,3 and Yapei Ye 1,2,3 1 School of Energy Resource, China University of Geosciences, Beijing 100083, China; [email protected] (D.L.); [email protected] (Z.X.); [email protected] (B.Z.); [email protected] (Y.Y.) 2 Key Laboratory of Marine Reservoir Evolution and Hydrocarbon Enrichment Mechanism, Ministry of Education, Beijing 100083, China 3 Key Laboratory of Strategy Evaluation for Shale Gas, Ministry of Land and Resources, Beijing 100083, China * Correspondence: [email protected]; Tel.: +86-134-8882-1576 Abstract: Changes to the redox environment of seawater in the Late Ordovician affect the process of organic matter enrichment and biological evolution. However, the evolution of redox and its underlying causes remain unclear. This paper analyzed the vertical variability of main, trace elements and δ34Spy from a drill core section (well ZY5) in the Upper Yangtze Platform, and described the redox conditions, paleoproductivity and paleoclimate variability recorded in shale deposits of the P. pacificus zone and M. extraordinarius zone that accumulated during Wufeng Formation. The results showed that shale from well ZY5 in Late Ordovician was deposited under oxidized water environment, and Citation: Lin, D.; Tang, S.; Xi, Z.; Zhang, B.; Ye, Y. Geochemical there are more strongly reducing bottom water conditions of the M. extraordinarius zone compared Characteristics of Late Ordovician with the P. -
Jocelyn A. Sessa
Jocelyn A. Sessa Current: Assistant Curator of Invertebrate Paleontology, Academy of Natural Sciences, & Assistant Professor, Department of Biodiversity, Earth & Environmental Science of Drexel University. Past Positions: 2016 to 2017 Senior Scientist in Paleontology & Education, American Museum of Natural History. Postdoctoral Fellowships: 2012 to 2016 Departments of Paleontology & Education, American Museum of Natural History. 2010 to 2012 Department of Paleobiology, Smithsonian National Museum of Natural History. 2009 to 2010 Department of Earth Sciences, Syracuse University. Education: Ph.D., 2009 Department of Geosciences, Pennsylvania State University, University Park, PA. M.S., 2003 Department of Geology, University of Cincinnati, Cincinnati, Ohio. B.A., 2000 Department of Geological Sciences, State University of New York at Geneseo, Geneseo, NY. Cum laude, minor in Environmental Studies. Publications (* indicates student author; for student work, ‡ indicates corresponding author): Buczek, A.J.*, Hendy, A., Hopkins, M. Sessa, J.A.‡ 2020. On the reconciliation of biostratigraphy and strontium isotope stratigraphy of three southern Californian Plio-Pleistocene formations. Geological Society of America Bulletin 132 ; doi.org/10.1130/B35488.1. Oakes, R.L., Sessa, J.A. 2020. Determining how biotic and abiotic variables affect the shell condition and parameters of Heliconoides inflatus pteropods from a sediment trap in the Cariaco Basin. Biogeosciences 17:1975–1990; doi.org/10.5194/bg-17-1975-2020. Oakes, R.L., Hill Chase, M., Siddall, M.E., Sessa, J.A. 2020. Testing the impact of two key scan parameters on the quality and repeatability of measurements from CT scan data. Palaeontologia Electronica 23(1):a07; doi.org/10.26879/942. Ferguson, K.*, MacLeod, K.G.‡, Landman, N.H., Sessa, J.A.‡ 2019. -
Coupled Reductive and Oxidative Sulfur Cycling in the Phototrophic Plate of a Meromictic Lake T
Geobiology (2014), 12, 451–468 DOI: 10.1111/gbi.12092 Coupled reductive and oxidative sulfur cycling in the phototrophic plate of a meromictic lake T. L. HAMILTON,1 R. J. BOVEE,2 V. THIEL,3 S. R. SATTIN,2 W. MOHR,2 I. SCHAPERDOTH,1 K. VOGL,3 W. P. GILHOOLY III,4 T. W. LYONS,5 L. P. TOMSHO,3 S. C. SCHUSTER,3,6 J. OVERMANN,7 D. A. BRYANT,3,6,8 A. PEARSON2 AND J. L. MACALADY1 1Department of Geosciences, Penn State Astrobiology Research Center (PSARC), The Pennsylvania State University, University Park, PA, USA 2Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA, USA 3Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA 4Department of Earth Sciences, Indiana University-Purdue University Indianapolis, Indianapolis, IN, USA 5Department of Earth Sciences, University of California, Riverside, CA, USA 6Singapore Center for Environmental Life Sciences Engineering, Nanyang Technological University, Nanyang, Singapore 7Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany 8Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA ABSTRACT Mahoney Lake represents an extreme meromictic model system and is a valuable site for examining the organisms and processes that sustain photic zone euxinia (PZE). A single population of purple sulfur bacte- ria (PSB) living in a dense phototrophic plate in the chemocline is responsible for most of the primary pro- duction in Mahoney Lake. Here, we present metagenomic data from this phototrophic plate – including the genome of the major PSB, as obtained from both a highly enriched culture and from the metagenomic data – as well as evidence for multiple other taxa that contribute to the oxidative sulfur cycle and to sulfate reduction. -
Microbial Diversity Under Extreme Euxinia: Mahoney Lake, Canada V
Geobiology (2012), 10, 223–235 DOI: 10.1111/j.1472-4669.2012.00317.x Microbial diversity under extreme euxinia: Mahoney Lake, Canada V. KLEPAC-CERAJ,1,2 C. A. HAYES,3 W. P. GILHOOLY,4 T. W. LYONS,5 R. KOLTER2 AND A. PEARSON3 1Department of Molecular Genetics, Forsyth Institute, Cambridge, MA, USA 2Department of Microbiology and Molecular Genetics, Harvard Medical School, Boston, MA, USA 3Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA, USA 4Department of Earth and Planetary Sciences, Washington University, Saint Louis, MO, USA 5Department of Earth Sciences, University of California, Riverside, CA, USA ABSTRACT Mahoney Lake, British Columbia, Canada, is a stratified, 15-m deep saline lake with a euxinic (anoxic, sulfidic) hypolimnion. A dense plate of phototrophic purple sulfur bacteria is found at the chemocline, but to date the rest of the Mahoney Lake microbial ecosystem has been underexamined. In particular, the microbial community that resides in the aphotic hypolimnion and ⁄ or in the lake sediments is unknown, and it is unclear whether the sulfate reducers that supply sulfide for phototrophy live only within, or also below, the plate. Here we profiled distribu- tions of 16S rRNA genes using gene clone libraries and PhyloChip microarrays. Both approaches suggest that microbial diversity is greatest in the hypolimnion (8 m) and sediments. Diversity is lowest in the photosynthetic plate (7 m). Shallower depths (5 m, 7 m) are rich in Actinobacteria, Alphaproteobacteria, and Gammaproteo- bacteria, while deeper depths (8 m, sediments) are rich in Crenarchaeota, Natronoanaerobium, and Verrucomi- crobia. The heterogeneous distribution of Deltaproteobacteria and Epsilonproteobacteria between 7 and 8 m is consistent with metabolisms involving sulfur intermediates in the chemocline, but complete sulfate reduction in the hypolimnion. -
Persistent Global Marine Euxinia in the Early Silurian ✉ Richard G
ARTICLE https://doi.org/10.1038/s41467-020-15400-y OPEN Persistent global marine euxinia in the early Silurian ✉ Richard G. Stockey 1 , Devon B. Cole 2, Noah J. Planavsky3, David K. Loydell 4,Jiří Frýda5 & Erik A. Sperling1 The second pulse of the Late Ordovician mass extinction occurred around the Hirnantian- Rhuddanian boundary (~444 Ma) and has been correlated with expanded marine anoxia lasting into the earliest Silurian. Characterization of the Hirnantian ocean anoxic event has focused on the onset of anoxia, with global reconstructions based on carbonate δ238U 1234567890():,; modeling. However, there have been limited attempts to quantify uncertainty in metal isotope mass balance approaches. Here, we probabilistically evaluate coupled metal isotopes and sedimentary archives to increase constraint. We present iron speciation, metal concentration, δ98Mo and δ238U measurements of Rhuddanian black shales from the Murzuq Basin, Libya. We evaluate these data (and published carbonate δ238U data) with a coupled stochastic mass balance model. Combined statistical analysis of metal isotopes and sedimentary sinks provides uncertainty-bounded constraints on the intensity of Hirnantian-Rhuddanian euxinia. This work extends the duration of anoxia to >3 Myrs – notably longer than well-studied Mesozoic ocean anoxic events. 1 Stanford University, Department of Geological Sciences, Stanford, CA 94305, USA. 2 School of Earth & Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA. 3 Department of Geology and Geophysics, Yale University, New Haven, CT 06511, USA. 4 School of the Environment, Geography and Geosciences, University of Portsmouth, Portsmouth PO1 3QL, UK. 5 Faculty of Environmental Sciences, Czech University of Life Sciences ✉ Prague, Prague, Czech Republic. -
Lipidomic and Genomic Investigation of Mahoney Lake, B.C
Lipidomic and Genomic Investigation of Mahoney Lake, B.C. The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Bovee, Roderick. 2014. Lipidomic and Genomic Investigation of Mahoney Lake, B.C.. Doctoral dissertation, Harvard University. Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:11745724 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Lipidomic and Genomic Investigation of Mahoney Lake, B.C. A dissertation presented by Roderick Bovee to The Department of Earth and Planetary Sciences in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the subject of Earth and Planetary Sciences Harvard University Cambridge, Massachusetts December, 2013 © 2013 – Roderick Bovee All rights reserved. Dissertation Adviser: Professor Ann Pearson Roderick Bovee Lipidomic and Genomic Investigation of Mahoney Lake, B.C. Abstract Photic-zone euxinia (PZE) is associated with several times in Earth's history including Phanerozoic extinction events and long parts of the Proterozoic. One of the best modern analogues for extreme PZE is Mahoney Lake in British Columbia, Canada where a dense layer of purple sulfur bacteria separate the oxic mixolimnion from one of the most sulfidic monimolimnions in the world. These purple sulfur bacteria are known to produce the carotenoid okenone. Okenone's diagenetic product, okenane, has potential as a biomarker for photic-zone euxinia, so understanding its production and transport is important for interpreting the geologic record. -
Coincidence of Photic Zone Euxinia and Impoverishment of Arthropods
www.nature.com/scientificreports OPEN Coincidence of photic zone euxinia and impoverishment of arthropods in the aftermath of the Frasnian- Famennian biotic crisis Krzysztof Broda1*, Leszek Marynowski2, Michał Rakociński1 & Michał Zatoń1 The lowermost Famennian deposits of the Kowala quarry (Holy Cross Mountains, Poland) are becoming famous for their rich fossil content such as their abundant phosphatized arthropod remains (mostly thylacocephalans). Here, for the frst time, palaeontological and geochemical data were integrated to document abundance and diversity patterns in the context of palaeoenvironmental changes. During deposition, the generally oxic to suboxic conditions were interrupted at least twice by the onset of photic zone euxinia (PZE). Previously, PZE was considered as essential in preserving phosphatised fossils from, e.g., the famous Gogo Formation, Australia. Here, we show, however, that during PZE, the abundance of arthropods drastically dropped. The phosphorous content during PZE was also very low in comparison to that from oxic-suboxic intervals where arthropods are the most abundant. As phosphorous is essential for phosphatisation but also tends to fux of the sediment during bottom water anoxia, we propose that the PZE in such a case does not promote the fossilisation of the arthropods but instead leads to their impoverishment and non-preservation. Thus, the PZE conditions with anoxic bottom waters cannot be presumed as universal for exceptional fossil preservation by phosphatisation, and caution must be paid when interpreting the fossil abundance on the background of redox conditions. 1 Euxinic conditions in aquatic environments are defned as the presence of H2S and absence of oxygen . If such conditions occur at the chemocline in the water column, where light is available, they are defned as photic zone euxinia (PZE). -
This Article Was Published in an Elsevier Journal. the Attached Copy
This article was published in an Elsevier journal. The attached copy is furnished to the author for non-commercial research and education use, including for instruction at the author’s institution, sharing with colleagues and providing to institution administration. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/copyright Author's personal copy Available online at www.sciencedirect.com Geochimica et Cosmochimica Acta 72 (2008) 1396–1414 www.elsevier.com/locate/gca Okenane, a biomarker for purple sulfur bacteria (Chromatiaceae), and other new carotenoid derivatives from the 1640 Ma Barney Creek Formation Jochen J. Brocks a,*, Philippe Schaeffer b a Research School of Earth Sciences and Centre for Macroevolution and Macroecology, The Australian National University, Canberra, ACT 0200, Australia b Laboratoire de Ge´ochimie Bio-organique, CNRS UMR 7177, Ecole Europe´enne de Chimie, Polyme`res et Mate´riaux, 25 rue Becquerel, 67200 Strasbourg, France Received 20 June 2007; accepted in revised form 12 December 2007; available online 23 December 2007 Abstract Carbonates of the 1640 million years (Ma) old Barney Creek Formation (BCF), McArthur Basin, Australia, contain more than 22 different C40 carotenoid derivatives including lycopane, c-carotane, b-carotane, chlorobactane, isorenieratane, b-iso- renieratane, renieratane, b-renierapurpurane, renierapurpurane and the monoaromatic carotenoid okenane. -
A Sulfidic Driver for the End-Ordovician Mass Extinction
Earth and Planetary Science Letters 331–332 (2012) 128–139 Contents lists available at SciVerse ScienceDirect Earth and Planetary Science Letters journal homepage: www.elsevier.com/locate/epsl A sulfidic driver for the end-Ordovician mass extinction Emma U. Hammarlund a,b,c,⁎, Tais W. Dahl b, David A.T. Harper d,f, David P.G. Bond e, Arne T. Nielsen f, Christian J. Bjerrum g, Niels H. Schovsbo h, Hans P. Schönlaub i, Jan A. Zalasiewicz j, Donald E. Canfield b a Department of Palaeozoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden b Nordic Center for Earth Evolution (NordCEE) and Institute of Biology, University of Southern Denmark, DK-5230 Odense C, Denmark c Department of Geological Sciences, Stockholm University, SE-106 91 Stockholm, Sweden d Department of Earth Sciences, Durham University, Durham DH1 3LE, UK e School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK f Natural History Museum of Denmark (Geological Museum), University of Copenhagen, Øster Voldgade 5–7, DK-1350 Copenhagen K, Denmark g Nordic Center for Earth Evolution (NordCEE) and Department of Geography and Geology, University of Copenhagen, Øster Voldgade 10, DK-1350 Copenhagen K, Denmark h Geological Survey of Denmark and Greenland, DK-1350 Copenhagen K, Denmark i Austrian Academy of Science, Center for Geosciences, Vienna, Austria j Department of Geology, University of Leicester, University Road, Leicester, LE1 7RH, UK article info abstract Article history: The end-Ordovician extinction consisted of two discrete pulses, both linked, in various ways, to glaciation at Received 26 December 2011 the South Pole. -
The Early Toarcian Environmental Crisis and Oceanic Anoxic Event
Paleo-ecosystems: Early Toarcian environmental crisis The Early Toarcian environmental crisis and oceanic anoxic event (Early Jurassic; 183 Ma BP) Paleo-ecosystems: Early Toarcian environmental crisis Oceanic anoxic events (OAE): OAEs represent periods in Earth’s history that were highlighted by widespread organic matter burial, associated with anoxia and/or euxinia at a global scale. The Early Toarcian OAE represent the first of series of OAEs documented throughout the Jurassic and Cretaceous (Jenkyns, 2010). OAEs were often accompanied by (global) climate perturbations and extinction events. Paleo-ecosystems: Early Toarcian environmental crisis In the sedimentary record the Early Toarcian event is expressed by the widespread accumulation of organic matter-rich sediments. Those have been intensively studied throughout Europe (Germany: Posidonia Shale; France: Schistes Carton; UK: Jet Rock). Early Toarcian bituminous sediments have a thickness of 10 to 40 m and have been deposited within 1 to 1.5 Myr. At some locations black shale deposition lasted longer than 2 Myr. Due to high concentrations of organic matter and the wide spatial and stratigraphic extent, Early Toarcian black shales can be important sources rocks (e.g. North Sea, Central Paris Basin). Paleo-ecosystems: Early Toarcian environmental crisis Toarcian bituminous sediments are famous for their excellent fossil preservation. Remains of mainly nektonic organisms can be extremely enriched in distinct horizons, suggesting slow sediment accumulation rates in combination with a low-energetic depositional environment. Paleo-ecosystems: Early Toarcian environmental crisis extinction level glacial deposits? glacial K-F global warming carbon cycle sea level OAE LIP (icehouse-greenhouse transition?) perturbation rise Paleo-ecosystems: Early Toarcian environmental crisis Global paleogeographic reconstruction of the Earth during the Early Toarcian (approx.