Published OnlineFirst October 29, 2015; DOI: 10.1158/1535-7163.MCT-15-0400
Large Molecule Therapeutics Molecular Cancer Therapeutics Dual Agonist Surrobody Simultaneously Activates Death Receptors DR4 and DR5 to Induce Cancer Cell Death Snezana Milutinovic1, Arun K. Kashyap2, Teruki Yanagi3, Carina Wimer1, Sihong Zhou2,4, Ryann O'Neil2,5, Aaron L. Kurtzman2,6, Alexsandr Faynboym2, Li Xu2, Charles H. Hannum2,7, Paul W. Diaz8, Shu-ichi Matsuzawa1, Michael Horowitz2, Lawrence Horowitz2, Ramesh R. Bhatt2,6, and John C. Reed1
Abstract
Death receptors of the TNF family are found on the surface tions of short half-life and avoided decoy receptor sequestra- of most cancer cells and their activation typically kills cancer tion, but are limited by activating only one of the two death cells through the stimulation of the extrinsic apoptotic path- receptors. Here, we describe a DR4 and DR5 dual agonist way. The endogenous ligand for death receptors 4 and 5 (DR4 produced using Surrobody technology that activates both DR4 and DR5) is TNF-related apoptosis-inducing ligand, TRAIL and DR5 to induce apoptotic death of cancer cells in vitro and (Apo2L). As most untransformed cells are not susceptible to in vivo and also avoids decoy receptor sequestration. This fully TRAIL-induced apoptosis, death receptor activators have human anti-DR4/DR5 Surrobody displays superior potency to emerged as promising cancer therapeutic agents. One strategy DR4- and DR5-specific antibodies, even when combined with to stimulate death receptors in cancer patients is to use soluble TRAIL-sensitizing proapoptotic agents. Moreover, cancer cells human recombinant TRAIL protein, but this agent has limita- were less likely to acquire resistance to Surrobody than either tions of a short half-life and decoy receptor sequestration. anti-DR4 or anti-DR5 monospecific antibodies. Taken togeth- Another strategy that attempted to evade decoy receptor er, Surrobody shows promising preclinical proapoptotic activ- sequestration and to provide improved pharmacokinetic prop- ity against cancer cells, meriting further exploration of its erties was to generate DR4 or DR5 agonist antibodies. The potential as a novel cancer therapeutic agent. Mol Cancer Ther; resulting monoclonal agonist antibodies overcame the limita- 15(1); 114–24. 2015 AACR.
Introduction complex (DISC) and subsequent induction of apoptosis via caspase activation. The other three receptors lack the death-induc- TNF-related apoptosis-inducing ligand (TRAIL), also known as ing activity. DcR1 (decoy receptor 1) and DcR2 (decoy receptor 2) Apo2 ligand, belongs to the TNF superfamily of proteins. Many bind TRAIL but lack, or have a truncated death domain, respec- cancer cells have been shown to be sensitive to TRAIL-induced tively, and are believed to sequester TRAIL and modulate apo- killing, while normal cells are generally resistant, making TRAIL ptosis triggered by DR4 and DR5. A less-studied soluble receptor an attractive cancer therapy agent. TRAIL binds to at least five osteoprotegerin (OpG) has also been shown to bind TRAIL but its receptors. DR4 (Trail receptor 1) and DR5 (Trail receptor 2) are role in modulating effects of TRAIL remains poorly understood. transmembrane receptors that have an intracellular death domain Recombinant human TRAIL activates both DR4 and DR5, but (DD) that is essential for recruitment of death-inducing signaling has limited clinical utility because it is rapidly hydrolyzed in blood, resulting in a very short half-life of less than an hour (1–3). 1Sanford Burnham Prebys Medical Discovery Institute, La Jolla, Cali- In addition, TRAIL can be bound by decoy receptors, which further fornia. 2Sea Lane Biotechnologies, Mountain View, California. 3Hok- limits its utility. As an alternative to TRAIL, highly specific ago- 4 kaido University Graduate School of Medicine, Sapporo, Japan. Sutro nistic antibodies targeting individual death receptors that avoid Biopharma, South San Francisco, California. 5Novartis Institutes for Biomedical Research, Emeryville, California. 6Rigel Pharmaceuticals, decoy receptor binding have been generated and developed as Inc., South San Francisco, California. 7Oxford BioTherapeutics, San clinical therapeutics (4, 5). These antibodies are generally safe and 8 Jose, California. Biometrica, San Diego, California. exhibit substantially improved pharmacokinetic properties com- Note: Supplementary data for this article are available at Molecular Cancer pared with TRAIL, with serum half-lives on the order of days, Therapeutics Online (http://mct.aacrjournals.org/). rather than minutes (6–12). However, the specificity of these Corresponding Authors: John C. Reed, Sanford Burnham Prebys Medical antibodies has restricted their activity to either DR4 or DR5 and Discovery Institute, 10901 N Torrey Pines Road, La Jolla, CA 92037. Phone: limited their use to cancer cells that express the relevant target 858-795-5151; Fax: 858-646-3194; E-mail: [email protected]; and receptor. Even with these inherent limitations, some progress has Ramesh. R. Bhatt, Sea Lane Biotechnologies, R&D, 2450 Bayshore Pkwy, been made with multiple strategies for targeting death receptors in Mountain View, CA 94043. Email: [email protected] cancer therapy and several agents have been tested in multiple doi: 10.1158/1535-7163.MCT-15-0400 clinical trials, either as single agents or in combination with other 2015 American Association for Cancer Research. chemotherapeutic drugs (13, 14).
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Surrobody Simultaneously Activates DR4 and DR5 Receptors
To overcome current specificity limitations, we utilized a 100 U/mL penicillin, and 100 mg/mL streptomycin. All cell previously described Surrobody protein scaffold (15) to dis- lines were obtained from ATCC and were either cultured less cover a DR4/5 dual agonist. Surrobodies are derived from a than 6 months or were resuscitated from the expanded ATCC pre–B-cell receptor that is composed of a diversified immu- stocks that were less than 6 months old. noglobulin heavy chain complexed with invariant surrogate light chain that together confer specifichigh-affinity binding to Immunoblot analysis their targets. We screened human Surrobody libraries and MDA-MB-231 cells were plated in 12-well plates and the next discovered a very specific Surrobody with a single heavy chain day they were treated with 1 nmol/L of DR agonist for 3 hours. In variable region that binds and activates both DR4 and DR5 the case of Surrobody, DR4 and DR5 antibodies, protein G was with high affinity and potency. The presence of a single heavy added at 0.5 nmol/L to produce 0.5 molar ratio. Three hours chain that is capable of binding both DR4 and DR5 eliminated after treatment, cells were lysed in Laemmli sample buffer and a common problem of assembly of typical chimeric bispecific were run on SDS-PAGE, followed by immunoblotting using antibodies formed from two heavy and two light chains that antibodies directed against cleaved caspase-3, cleaved caspase target two different antigens. Importantly, this dual agonist 8, PARP, and actin. Surrobody specifically induces apoptosis through both death receptors and, unlike TRAIL, does not bind decoy receptors. In Caspase activity assays addition, we present preliminary evidence suggesting that MDA-MB-231 cells were plated at 1,500 cells/well in 40 mL Surrobody is less likely to incur resistance compared to mono- media in 384-well flat bottom plates (Greiner Bio-One). The next specific death receptor agonist antibodies. Moreover, we show day, 10 mL of media containing various concentrations of DR that this dual agonist Surrobody is capable of synergizing with agonists, preincubated for 5 minutes with 0.5 molar ratio of sensitizing agents to further enhance its clinical potential protein G, was added for 3 hours. For measuring effector caspase against apoptosis resistance. Taken together, the overall pro- activity, 40 mL of the caspase-3,7 reagent (Promega; cat. No. perties of the death receptor dual agonist Surrobody provides G6410) was added directly into wells and the plates were shaken an improvement over monospecific death receptor antibodies, for 30 minutes at room temperature. Luminescence was measured warranting further evaluation as a potential novel agent for according to manufacturer's instructions. For caspase-8 activity cancer therapy. measurements, 40 mL of caspase-Glo 8 reagent was added to wells together with MG132 (as recommended by the manufac- Materials and Methods turer, at 60 mmol/L final concentration) and the plates were Reagents shaken for 1 hour at room temperature prior to measuring The death receptor dual agonist Surrobody was provided by Sea luminescence. Lane Biotechnologies. DR4 antibody was synthesized from patent literature sources (US 7,361,341) and DR5 antibody was synthe- Cell viability assay sized based upon patent literature sources (EP1844077). Surro- For monolayer cultures, all cell lines were plated at 750 cells/ body, DR4- and DR5-specific antibodies were expressed in Free- 384 well in 50 mL media and the next day the cells were treated Style 293-F cells (Invitrogen) by transient transfection of heavy with increasing concentrations of DR agonists for 48 hours. To chain and light chain plasmids. Cultures were cleared of cells and compare relative amounts of cell survival, 30 mL of Cell Titer Glow Surrobody or antibodies purified by a single Protein A chroma- reagent was added into wells and the plates were shaken for tography step. The purified Surrobody and antibodies were buffer 20 minutes, followed by detection of luminescence accord- exchanged into PBS pH 7.4 lacking calcium and magnesium ing to manufacturer's recommendations (Promega Cat. No. (Gibco), sterile filtered and stored at 2 to 8 C. Proteins were G7570). For spheroid cultures, MDA-MB-231 cells were plated analyzed by size exclusion chromatography, reducing and non- at 2,000 cells/well in ultralow attachment 96-well plates in 100 mL reducing SDS-PAGE (Supplementary Fig. S1) to assess aggrega- media. Cells were grown for 8 days, at which time spheroids tion, purity and integrity. Anti–DR4-PE, anti–DR5-PE, and IgG reached diameters of approximately 750 nm. Spheroid cultures isotype control antibodies were obtained from eBioscience (cat were treated with DR4, DR5, or death receptor dual agonist no. 12-6644-41, 12-9908-41 and 12-4714). Anti-cleaved CAS- at 1,000 ng/mL or with TRAIL at 20 ng/mL, which were added PASE 3 (cat no. 9661), anti-cleaved CASPASE-8 (cat no. 9496), to well in 10 mL PBS. Before addition to cells, all the antibodies anti-PARP (cat no. 9542) antibodies are from Cell Signaling and Surrobody were incubated for 5 minutes with 0.5 molar Technology. ratio of protein G to facilitate clustering. After 2 days, 60 mLof Cell Titer Glow reagent was added and luminescence measure- Cell culture ments were recorded. Data were expressed as % survival compar- MDA-MB-231, SKOV3, OVCAR-3, OVCAR-5, MDA-MB-468, ed with 100% survival of PBS diluent control. Ramos, Jurkat, PC3 and cells were obtained from ATCC and were grown in RPMI medium with 10% FBS, 2 mmol/L glu- Generation of DR4, DR5, and TRAIL-resistant clones tamine, 100 U/mL penicillin, and 100 mg/mL streptomycin. MDA-MB-231 clones resistant to DR4, DR5, DR4þDR5, and HCT116 cells were grown in McCoy media with same additives. TRAIL were generated by culture for 3 weeks in 10 mL medium For three-dimensional spheroid cell growth, MDA-MB-231 cells containing DR agonists in 100 mm dishes. Briefly, anti-DR4 were plated at a density of 3,000 cells/well in ultra low attach- antibody (500 ng/mL), anti-DR5 antibody (1,000 ng/mL), or the ment 96-well round bottom plates (Corning; cat no. 7007). combination of anti-DR4 and anti-DR5 (250 ng/mL each), or 267B1 cells were a kind gift from Dr. Dritschilo (16) and TRAIL (50 ng/mL) was added to media, which was changed every weregrowninRPMIwith10%FBS,2mmol/Lglutamine, 3 days for a total of 3 weeks. Before addition to cells, all the
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monospecific antibodies and Surrobody were incubated for able, even at concentrations as high as 1,000 nmol/L (Supple- 5 minutes with 0.5 molar ratio of protein G to facilitate clus- mentary Fig. S3). In addition, we developed a "sandwich" ELISA tering. Resistant clones were allowed to grow until they reached and showed that Surrobody can bind DR4 and DR5 simulta- sizes visible to the naked eye. The clones were detached using a neously (Supplementary Fig. S4). This is in sharp contrast to drop of trysin and recovered cells were transferred into fresh plates previously reported specific binding of anti-DR4 and anti-DR5 and grown under continued selection pressure. At least two clones antibodies to DR4 and DR5 receptors, respectively, without from each treatment were tested for resistance and the most any cross-reactivity even at high concentrations (4, 5). resistant clone from each treatment was selected for further study. To establish the dual agonist bioactivity of the DR4/DR5- binding Surrobody, we firsttesteditonRamosandJurkatcell Tumor xenograft studies lines, which are responsive to only DR4 or DR5 activation, Male, 6-week-old nude mice were obtained from Charles River respectively (Fig. 1A and B). As shown, Surrobody was capable Laboratory. Animals were fed standard mouse chow and tap of killing both cell lines, similar to TRAIL (Ramos: Surrobody water, and maintained under 12 hours dark/light cycle at 21 C. IC50 ¼ 0.92 nmol/L vs. TRAIL IC50 ¼ 4.27 nmol/L; Jurkat: Male, 6-week-old nude mice were injected bilaterally subcutane- Surrobody IC50 ¼ 0.18 nmol/L vs. TRAIL IC50 ¼ 0.83 nmol/L). ously with 3 106 Colo-205 cells in 100 mL PBS. When the tumors This is in sharp contrast to previously described DR4 and DR5 had reached a volume of approximately 100 mm3, mice were monospecific agonist antibodies (patent US 7,361,341 and treated intravenously with either PBS or DR4 antibody, DR5 EP1844077, respectively) that are only capable of killing either antibody or dual agonist Surrobody at a concentration of 3 Ramos or Jurkat cells, respectively. mg/kg twice a week for a total of four treatments. Tumor dimen- Next, we tested the death receptor dual agonist against a sions were measured twice weekly using a digital caliper and broad panel of TRAIL-sensitive human cancer cell lines of tumor volume was calculated using the formula (width2 multiple tissue origins. The TRAIL-sensitive tumor cell lines we length)/2. The weight of the mice was also measured twice weekly evaluated included the triple-negative breast cancer line MDA- as a general measurement of health. MB-231, the colon cancer lines Colo-205 and HCT116, and the ovarian cancer lines Ovcar-3 and Ovcar-5 (Fig. 1C–G). We used Generation of DR4 and DR5 gene knockout cells flow cytometry for receptor profiling and found that all of these pX330 S.Pyogenes Cas9 vector was obtained from Addgene cell lines express both DR4 and DR5 at various levels (Supple- and used to generate vectors containing DR4 or DR5 receptor- mentary Table S1A and S1B). In general, the tumor cell lines targeting guide RNAs according to the previously developed exhibited varied sensitivity to conventional DR4- and DR5- protocols (17). Briefly, pX330 was digested using BbsI, fol- activating antibodies (Fig. 1) that did not always correlate with lowed by cloning of the annealed oligonucleotides targeting respective DR4 or DR5 expression, consistent with previous DR4 and DR5 receptor genes. For targeting DR5 receptor, 50- reports. In addition, sensitivity to TRAIL was also varied, with CACCGAGAACGCCCCGGCCGCTTCG-30 and 50-AAACCGAA- potencies greater than, less than, or comparable with the DR4 or GCGGCCGGGGCGTTCTC-30 were used, while for targeting DR5 antibodies. However, in every case, the death receptor dual DR4 receptor, 50-CACCGCTTCAAGTTTGTCGTCGTCG-30 and agonist Surrobody was as potent as or more potent than, the 50- AAACCGACGACGACAAACTTGAAGC-30 were used. These best agonist among TRAIL, anti-DR4 or anti-DR5 monospecific vectors were transfected into MDA-MB-231 cells using Lipo- antibodies. fectamine 2000 and after five days, the presence of nicking Most interesting was that the death receptor dual agonist and nonhomologous end joining was assayed by PCR ampli- Surrobody potency was markedly better than the combined fication of the targeted genomic regions corresponding to either anti-DR4/DR5 antibody mixture. In fact, the mixture of anti-DR4 DR4 or DR5 receptors, followed by SURVEYOR assay as pre- and anti-DR5 monospecific antibodies typically resulted in cell viously described (17). Once the presence of nicked clones was killing with potencies intermediate to either anti-DR4 or anti-DR5 confirmed, we selected cells that contained the knockout of alone (Fig. 1), rather than producing an additive or synergistic DR4 or DR5 by staining with anti–DR4-PE and anti–DR5-PE effect. antibodies, and sorted by FACS into populations that do or do As tumors do not naturally progress as monolayer growths, we not express the receptors. A pool of sorted DR4 and DR5 tested an in vitro propagated three-dimensional tumor spheroid knockout cells was used in subsequent cell viability assays. culture model as a tumor surrogate to study the effects of death receptor agonists. For this model, we selected MDA-MB-231 cells, culturing the cells in ultralow attachment plates, which lack the Results typical adhesion surface of classical cell culture plastic dishes. We assessed a collection of more than 300 unique clones Under these growth conditions, the cancer cells form spheres and found by panning a human phage displayed Surrobody library grow as a single mass. Using this three-dimensional tumor spher- against either human DR4 or DR5, essentially as described oid assay, the dual agonist Surrobody demonstrated significantly (15, 18) to identify a DR4 and DR5 cross-reactive Surrobody. more potent suppression of in vitro tumor spheroid growth than The resulting cross—reactive clone was reformatted and either DR4 or DR5 monospecific antibody or even the combina- expressed as a bivalent Surrobody using full-length heavy chains tion of these antibodies, but slightly less than TRAIL (Fig. 2). in HEK293 cells as previously described (15). The resulting Again, the combination of monospecific anti-DR4 and anti-DR5 Surrobody (Supplementary Figs. S1 and S2) was transiently antibodies did not result in additional growth suppression than expressed at levels yielding routinely nearly 100 mg/L of culture either antibody alone. and formed the basis of all subsequent analysis. ELISA-based On the basis of the previously reported importance of receptor assays showed the resulting Surrobody bound to both DR4 crosslinking to induce receptor clustering (19), we used and DR5, but no binding to DcR1, DcR2, or OPG was detect- 0.5 molar ratio of protein G to aid in DR4, DR5 and
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Surrobody Simultaneously Activates DR4 and DR5 Receptors
A Jurkat B Ramos C 100 MDA-MB-231 100 100 80 80 80 60 60 60 40 40 40 20 20 20 Cell viability (% inhibition)
Cell viability 0 Cell viability (% inhibition)
0 (% inhibition) 0 -20 -20 -20
-2 -1 210 -1 0 1 2 -3 -2 -1 210 Log (nmol/L) Log (nmol/L) Log (nmol/L) DEF 100 Colo-205 100 OVCAR-5 100 OVCAR-3 80 80 80 60 60 60 40 40 40 20 20 20 Cell viability Cell viability Cell viability (% inhibition) (% inhibition) 0 0 (% inhibition) 0 -20 -20 -20
-2 -1 210 -2 -1 210 -4 -2 0 2 Log (nmol/L) Log (nmol/L) Log (nmol/L) G 100 HCT-116 80 Surrobody 60 DR4 40 20 DR5 Cell viability
(% inhibition) 0 DR4+DR5 -20 TRAIL
-2 -1 210 Log (nmol/L)
Figure 1. Death receptor dual agonist Surrobody is a more potent inducer of tumor cell death than DR4 or DR5 monospecific antibodies. Various TRAIL-sensitive cancer cell lines were plated at a density of 750 cells/well in 384 wells. The next day cells were cultured with increasing concentrations of monospecific DR4 antibody (pink), monospecific anti-DR5 antibody (orange), the combination of anti-DR4 and anti-DR5 antibodies (black), death receptor dual agonist Surrobody (green), or TRAIL (blue) for 48 hours. Before addition to cells, all the antibodies and Surrobody were incubated for 5 minutes with 0.5 molar ratio of protein G to facilitate clustering. Relative cell viability was estimated from cellular ATP measurements using the Cell Titer Glo reagent (Promega), expressing data as percentage of inhibition of cell survival (mean SEM; n ¼ 4). Data are shown for Jurkat (A), Ramos (B), MDA-MB-231 (C), Colo-205 (D), Ovcar-3 (E) and Ovcar-5 (F) and HCT116 (G) cell lines.
Surrobody-induced receptor clustering in all of our cell culture began to shrink shortly after the start of treatment and all the assays. To test the importance of receptor clustering, we treated tumors completely disappeared by day 15. We found that DR5 MDA-MB-231 cells with Surrobody that has been cross-linked antibody and Surrobody displayed similar antitumor activity, with increasing molar ratio of protein G and found that it was whereas DR4 antibody reduced the rate of tumor growth, essential for cell death and that higher receptor clustering but was unable to eradicate the tumors (Fig. 3A). At day 25 increased cell death (Supplementary Fig. S5A). following tumor implantation, 10 of 10 anti–DR4-treated Interestingly, it was previously reported that use of protein mice still had palpable tumors, with one mouse having a tumor G is dispensable in vivo in xenograft studies, as there are other that reached endpoint size of over 1,000 mm3. Detailed com- factors such as endogenous Fc receptors that induce death parison of anti-DR5 antibody and anti-DR4/DR5 Surrobody receptor clustering following treatment with anti-DR4 and responses (Fig. 3B) showed that 10 of 10 Surrobody-treated anti-DR5 antibodies (19–21). To test if Surrobody can induce mice achieved complete response with no palpable tumors cell death without protein G clustering in vivo,wecompared observed from day 15 until the end of the study. In the case the antitumor activities of DR4 antibody, DR5 antibody of anti–DR5-treated mice, 3 of 10 mice showed complete and Surrobody in Colo-205 tumor xenograft studies. Briefly, response by day 15, and by the end of the study 4 of 10 mice we implanted Colo-205 cells subcutaneously bilaterally into showed complete response, while 6 mice still had palpable immunocompromised mice and allowed five days for the tumors (Fig. 3B). tumors to grow to approximately 100 mm3 before initiating We did not observe any toxicities of Surrobody during the treatment. Mice received intravenous injection of 3 mg/kg study, inasmuch as the mice looked healthy, did not lose weight, of antibodies twice per week for a total of four treatments. By and the histologic examination of various tissues at the end of the day 18, the tumors in the PBS vehicle-treated animals reached study did not reveal any toxicities (Supplementary Fig. S6). 1,000 mm3 in size that served as an endpoint for termination. However, given that Surrobody does not bind to mouse death In sharp contrast, the tumors of the Surrobody-treated mice receptor, these observations address non-specific toxicity, but
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cellular activation of apoptotic caspases by using luminogenic caspase-8 and caspase-3 assays. In the first case, we used a peptide 1,000 mm1,000 mm 1,000 mm 1,000 mm 1,000 mm 1,000 mm 120 substrate containing an "IETD"-containing sequence that becomes luminogenic upon proteolytic cleavage by CASPASE-8 100 al (Caspase 8 Glo). This assay revealed concentration-dependent iv v
l) 80 increases in CASPASE-8 activity in MDA-MB-231 cells following o r
t treatment with death receptor dual agonist and the other 60 TRAIL receptor agonists. We found that the death receptor dual e cell sur ¼ (% con