Antiquity of Forelimb Ecomorphological Diversity in the Mammalian Stem Lineage (Synapsida)
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Distributions of Extinction Times from Fossil Ages and Tree Topologies: the Example of Some Mid-Permian Synapsid Extinctions Gilles Didier, Michel Laurin
Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier, Michel Laurin To cite this version: Gilles Didier, Michel Laurin. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions. 2021. hal-03258099v2 HAL Id: hal-03258099 https://hal.archives-ouvertes.fr/hal-03258099v2 Preprint submitted on 20 Sep 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier1 and Michel Laurin2 1 IMAG, Univ Montpellier, CNRS, Montpellier, France 2 CR2P (\Centre de Pal´eontologie { Paris"; UMR 7207), CNRS/MNHN/SU, Mus´eumNational d'Histoire Naturelle, Paris, France September 16, 2021 Abstract Given a phylogenetic tree that includes only extinct, or a mix of extinct and extant taxa, where at least some fossil data are available, we present a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account (i) the possibility that the taxa or the clade considered may diversify before going extinct and (ii) the whole phylogenetic tree to estimate extinction times, whilst previous methods do not consider the diversification process and deal with each branch independently. -
On the Stratigraphic Range of the Dicynodont Taxon Emydops (Therapsida: Anomodontia) in the Karoo Basin, South Africa
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Wits Institutional Repository on DSPACE On the stratigraphic range of the dicynodont taxon Emydops (Therapsida: Anomodontia) in the Karoo Basin, South Africa Kenneth D. Angielczyk1*, Jörg Fröbisch2 & Roger M.H. Smith3 1Department of Earth Sciences, University of Bristol, Wills Memorial Building, Queens Road, BS8 1RJ, United Kingdom 2Department of Biology, University of Toronto at Mississauga, 3359 Mississauga Rd., Mississauga, ON, L5L 1C6, Canada 3Divison of Earth Sciences, South African Museum, P.O. Box 61, Cape Town, 8000 South Africa Received 19 May 2005. Accepted 8 June 2006 The dicynodont specimen SAM-PK-708 has been referred to the genera Pristerodon and Emydops by various authors, and was used to argue that the first appearance of Emydops was in the Tapinocephalus Assemblage Zone in the Karoo Basin of South Africa. However, the specimen never has been described in detail, and most discussions of its taxonomic affinities were based on limited data. Here we redescribe the specimen and compare it to several small dicynodont taxa from the Tapinocephalus and Pristerognathus assemblage zones. Although the specimen is poorly preserved, it possesses a unique combination of features that allows it to be assigned confidently to Emydops. The locality data associated with SAM-PK-708 are vague, but they allow the provenance of the specimen to be narrowed down to a relatively limited area southwest of the town of Beaufort West. Strata from the upper Tapinocephalus Assemblage Zone and the Pristerognathus Assemblage Zone crop out in this area, but we cannot state with certainty from which of these biostratigraphic divisions the specimen was collected. -
First Palaeohistological Inference of Resting
First palaeohistological inference of resting metabolic rate in an extinct synapsid, Moghreberia nmachouensis (Therapsida: Anomodontia) Chloe Olivier, Alexandra Houssaye, Nour-Eddine Jalil, Jorge Cubo To cite this version: Chloe Olivier, Alexandra Houssaye, Nour-Eddine Jalil, Jorge Cubo. First palaeohistological inference of resting metabolic rate in an extinct synapsid, Moghreberia nmachouensis (Therapsida: Anomodon- tia). Biological Journal of the Linnean Society, Linnean Society of London, 2017, 121 (2), pp.409-419. 10.1093/biolinnean/blw044. hal-01625105 HAL Id: hal-01625105 https://hal.sorbonne-universite.fr/hal-01625105 Submitted on 27 Oct 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. First palaeohistological inference of resting metabolic rate in extinct synapsid, Moghreberia nmachouensis (Therapsida: Anomodontia) CHLOE OLIVIER1,2, ALEXANDRA HOUSSAYE3, NOUR-EDDINE JALIL2 and JORGE CUBO1* 1 Sorbonne Universités, UPMC Univ Paris 06, CNRS, UMR 7193, Institut des Sciences de la Terre Paris (iSTeP), 4 place Jussieu, BC 19, 75005, Paris, France 2 Sorbonne Universités -CR2P -MNHN, CNRS, UPMC-Paris6. Muséum national d’Histoire naturelle. 57 rue Cuvier, CP38. F-75005, Paris, France 3Département Écologie et Gestion de la Biodiversité, UMR 7179, CNRS/Muséum national d’Histoire naturelle, 57 rue Cuvier, CP 55, Paris, 75005, France *Corresponding author. -
A New Mid-Permian Burnetiamorph Therapsid from the Main Karoo Basin of South Africa and a Phylogenetic Review of Burnetiamorpha
Editors' choice A new mid-Permian burnetiamorph therapsid from the Main Karoo Basin of South Africa and a phylogenetic review of Burnetiamorpha MICHAEL O. DAY, BRUCE S. RUBIDGE, and FERNANDO ABDALA Day, M.O., Rubidge, B.S., and Abdala, F. 2016. A new mid-Permian burnetiamorph therapsid from the Main Karoo Basin of South Africa and a phylogenetic review of Burnetiamorpha. Acta Palaeontologica Polonica 61 (4): 701–719. Discoveries of burnetiamorph therapsids in the last decade and a half have increased their known diversity but they remain a minor constituent of middle–late Permian tetrapod faunas. In the Main Karoo Basin of South Africa, from where the clade is traditionally best known, specimens have been reported from all of the Permian biozones except the Eodicynodon and Pristerognathus assemblage zones. Although the addition of new taxa has provided more evidence for burnetiamorph synapomorphies, phylogenetic hypotheses for the clade remain incongruent with their appearances in the stratigraphic column. Here we describe a new burnetiamorph specimen (BP/1/7098) from the Pristerognathus Assemblage Zone and review the phylogeny of the Burnetiamorpha through a comprehensive comparison of known material. Phylogenetic analysis suggests that BP/1/7098 is closely related to the Russian species Niuksenitia sukhonensis. Remarkably, the supposed mid-Permian burnetiids Bullacephalus and Pachydectes are not recovered as burnetiids and in most cases are not burnetiamorphs at all, instead representing an earlier-diverging clade of biarmosuchians that are characterised by their large size, dentigerous transverse process of the pterygoid and exclusion of the jugal from the lat- eral temporal fenestra. The evolution of pachyostosis therefore appears to have occurred independently in these genera. -
Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha)
Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha) by Richard Kissel A thesis submitted in conformity with the requirements for the degree of doctor of philosophy Graduate Department of Ecology & Evolutionary Biology University of Toronto © Copyright by Richard Kissel 2010 Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha) Richard Kissel Doctor of Philosophy Graduate Department of Ecology & Evolutionary Biology University of Toronto 2010 Abstract Based on dental, cranial, and postcranial anatomy, members of the Permo-Carboniferous clade Diadectidae are generally regarded as the earliest tetrapods capable of processing high-fiber plant material; presented here is a review of diadectid morphology, phylogeny, taxonomy, and paleozoogeography. Phylogenetic analyses support the monophyly of Diadectidae within Diadectomorpha, the sister-group to Amniota, with Limnoscelis as the sister-taxon to Tseajaia + Diadectidae. Analysis of diadectid interrelationships of all known taxa for which adequate specimens and information are known—the first of its kind conducted—positions Ambedus pusillus as the sister-taxon to all other forms, with Diadectes sanmiguelensis, Orobates pabsti, Desmatodon hesperis, Diadectes absitus, and (Diadectes sideropelicus + Diadectes tenuitectes + Diasparactus zenos) representing progressively more derived taxa in a series of nested clades. In light of these results, it is recommended herein that the species Diadectes sanmiguelensis be referred to the new genus -
Distributions of Extinction Times from Fossil Ages and Tree Topologies: the Example of Some Mid-Permian Synapsid Extinctions
bioRxiv preprint doi: https://doi.org/10.1101/2021.06.11.448028; this version posted June 11, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier1 and Michel Laurin2 1IMAG, Univ Montpellier, CNRS, Montpellier, France 2CR2P (“Centre de Recherches sur la Paléobiodiversité et les Paléoenvironnements”; UMR 7207), CNRS/MNHN/UPMC, Sorbonne Université, Muséum National d’Histoire Naturelle, Paris, France June 11, 2021 Abstract Given a phylogenetic tree of extinct and extant taxa with fossils where the only temporal infor- mation stands in the fossil ages, we devise a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account the possibility that the taxa or the clade considered may diversify before going extinct, whilst previous methods just rely on the fossil recovery rate to estimate confidence intervals. We assess and compare our new approach with a standard previous one using simulated data. Results show that our method provides more accurate confidence intervals. This new approach is applied to the study of the extinction time of three Permo-Carboniferous synapsid taxa (Ophiacodontidae, Edaphosauridae, and Sphenacodontidae) that are thought to have disappeared toward the end of the Cisuralian, or possibly shortly thereafter. The timing of extinctions of these three taxa and of their component lineages supports the idea that a biological crisis occurred in the late Kungurian/early Roadian. -
Morphology and Evolutionary Significance of the Atlas−Axis Complex in Varanopid Synapsids
Morphology and evolutionary significance of the atlas−axis complex in varanopid synapsids NICOLÁS E. CAMPIONE and ROBERT R. REISZ Campione, N.E. and Reisz, R.R. 2011. Morphology and evolutionary significance of the atlas−axis complex in varanopid synapsids. Acta Palaeontologica Polonica 56 (4): 739–748. The atlas−axis complex has been described in few Palaeozoic taxa, with little effort being placed on examining variation of this structure within a small clade. Most varanopids, members of a clade of gracile synapsid predators, have well pre− served atlas−axes permitting detailed descriptions and examination of morphological variation. This study indicates that the size of the transverse processes on the axis and the shape of the axial neural spine vary among members of this clade. In particular, the small mycterosaurine varanopids possess small transverse processes that point posteroventrally, and the axial spine is dorsoventrally short, with a flattened dorsal margin in lateral view. The larger varanodontine varanopids have large transverse processes with a broad base, and a much taller axial spine with a rounded dorsal margin in lateral view. Based on outgroup comparisons, the morphology exhibited by the transverse processes is interpreted as derived in varanodontines, whereas the morphology of the axial spine is derived in mycterosaurines. The axial spine anatomy of Middle Permian South African varanopids is reviewed and our interpretation is consistent with the hypothesis that at least two varanopid taxa are present in South Africa, a region overwhelmingly dominated by therapsid synapsids and parareptiles. Key words: Synapsida, Varanopidae, Mycterosaurinae, Varanodontinae, atlas−axis complex, axial skeleton, Middle Permian, South Africa. -
Journal of Anatomy
Journal of Anatomy J. Anat. (2017) 230, pp325--336 doi: 10.1111/joa.12557 Reconstruction of body cavity volume in terrestrial tetrapods Marcus Clauss,1 Irina Nurutdinova,2 Carlo Meloro,3 Hanns-Christian Gunga,4 Duofang Jiang,2 Johannes Koller,2 Bernd Herkner,5 P. Martin Sander6 and Olaf Hellwich2 1Clinic for Zoo Animals, Exotic Pets and Wildlife, University of Zurich, Zurich, Switzerland 2Computer Vision and Remote Sensing, Technical University Berlin, Berlin, Germany 3Research Centre in Evolutionary Anthropology and Palaeoecology, Liverpool John Moores University, Liverpool, UK 4ChariteCrossOver - Institute of Physiology, Berlin, Germany 5Senckenberg Research Institute and Natural History Museum, Frankfurt (Main), Germany 6Steinmann Institute of Palaeontology, University of Bonn, Bonn, Germany Abstract Although it is generally assumed that herbivores have more voluminous body cavities due to larger digestive tracts required for the digestion of plant fiber, this concept has not been addressed quantitatively. We estimated the volume of the torso in 126 terrestrial tetrapods (synapsids including basal synapsids and mammals, and diapsids including birds, non-avian dinosaurs and reptiles) classified as either herbivore or carnivore in digital models of mounted skeletons, using the convex hull method. The difference in relative torso volume between diet types was significant in mammals, where relative torso volumes of herbivores were about twice as large as that of carnivores, supporting the general hypothesis. However, this effect was not evident in diapsids. This may either reflect the difficulty to reliably reconstruct mounted skeletons in non-avian dinosaurs, or a fundamental difference in the bauplan of different groups of tetrapods, for example due to differences in respiratory anatomy. -
Dashankou Fauna: a Unique Window on the Early Evolution of Therapsids
Vol.24 No.2 2010 Paleoherpetology Dashankou Fauna: A Unique Window on the Early Evolution of Therapsids LIU Jun* Institute of Vertebrate Paleontology and Paleoanthropology, CAS, Beijing 100044, China n the 1980s, the Institute of Geology, Chinese Academy of IGeological Sciences (IGCAGS) sent an expedition to the area north of the Qilian Mountains to study the local terrestrial Permian and Triassic deposits. A new vertebrate fossil locality, later named Dashankou Fauna, was discovered by Prof. CHENG Zhengwu in Dashankou, Yumen, Gansu Province in 1981. Small-scale excavations in 1981, 1982 and 1985 demonstrated that this locality was a source of abundant and diverse vertebrate fossils. In the 1990s, supported by the National Natural Science Foundation of China, the Fig. 1 Prof. LI Jinling in the excavation of 1995. She first summarized the known IGCAGS, the Institute of Vertebrate members of the Dashankou Fauna and brought it to light as the most primitive and abundant Chinese tetrapod fauna. Paleontology and Paleoanthropology (IVPP) under CAS, and the Geological Museum of China formed a joint team IVPP were productive and have since investigations were first disseminated to work on this fauna. Three large- unveiled an interesting episode in the to the public in 1995. In 2001, Prof. scale excavations, undertaken in transition from reptiles to mammals in LI Jinling summarized the known 1991, 1992, and 1995 respectively, as evolutionary history. members of the fauna and discussed well as the subsequent ones held by The results from these their features. She pointed out that * To whom correspondence should be addressed at [email protected]. -
The Skull of Mesenosaurus Romeri, a Small Varanopseid (Synapsida: Eupelycosauria) from the Upper Permian of the Mezen River Basin, Northern Russia
ANNALS OF CARNEGIE MUSEUM VOL. 70, NUMBER 2, PP. 113-f32 24 MAY 2001 THE SKULL OF MESENOSAURUS ROMERI, A SMALL VARANOPSEID (SYNAPSIDA: EUPELYCOSAURIA) FROM THE UPPER PERMIAN OF THE MEZEN RIVER BASIN, NORTHERN RUSSIA ROBERT R. REIsz] Research Associate, Section of Vertebrate Fossils DAVID S BERMAN Curator, Section of Vertebrate Paleontology ABSTRACT Restudy of Mesenosaurus romeri, based on new and previously described cranial materials from the Upper Permian of the Mezen River basin of northern Russia, confirms its assignment to the synapsid eupelycosaurian family Varanopseidae. Comparisons with other members of the family support a pattern of relationship that recognizes two clades: one is composed of Mesenosaurus and Mycterosaurus for which the subfamily designation Myctersaurinae is proposed, and the other includes the remaining well known varanopseids Elliotsmithia, Varanops, Varanodon, and Aerosaurus for which the subfamily des ignation Varanodontinae is proposed. Among the late Paleozoic synapsids, Varanopseidae has the longest fossil record, extending from the end of the Carboniferous to well into the Late Permian, and the widest geographical distribution, including North America, South Africa, and Russia. KEy WORDs: Varanopseidae (Mesenosaurus), Synapsida, Upper Permian, Mezen River Basin, Russia INTRODUCTION The Mezen River basin of northern Russia has extensive exposures of Upper Permian sediments along the edges of several rivers, especially the Peza and Kimja rivers, both affiuents of the Mezen River. These sediments, although visited only sporadically by paleontologists and geologists, have produced the skeletal remains of a diverse assemblage of amniotes, including numerous enigmatic par areptiles, at least two therapsids, and most interestingly a small synapsid of var anopseid affinities, Mesenosaurus romeri Efremov (1938). -
A New Late Permian Burnetiamorph from Zambia Confirms Exceptional
fevo-09-685244 June 19, 2021 Time: 17:19 # 1 ORIGINAL RESEARCH published: 24 June 2021 doi: 10.3389/fevo.2021.685244 A New Late Permian Burnetiamorph From Zambia Confirms Exceptional Levels of Endemism in Burnetiamorpha (Therapsida: Biarmosuchia) and an Updated Paleoenvironmental Interpretation of the Upper Madumabisa Mudstone Formation Edited by: 1 † 2 3,4† Mark Joseph MacDougall, Christian A. Sidor * , Neil J. Tabor and Roger M. H. Smith Museum of Natural History Berlin 1 Burke Museum and Department of Biology, University of Washington, Seattle, WA, United States, 2 Roy M. Huffington (MfN), Germany Department of Earth Sciences, Southern Methodist University, Dallas, TX, United States, 3 Evolutionary Studies Institute, Reviewed by: University of the Witwatersrand, Johannesburg, South Africa, 4 Iziko South African Museum, Cape Town, South Africa Sean P. Modesto, Cape Breton University, Canada Michael Oliver Day, A new burnetiamorph therapsid, Isengops luangwensis, gen. et sp. nov., is described Natural History Museum, on the basis of a partial skull from the upper Madumabisa Mudstone Formation of the United Kingdom Luangwa Basin of northeastern Zambia. Isengops is diagnosed by reduced palatal *Correspondence: Christian A. Sidor dentition, a ridge-like palatine-pterygoid boss, a palatal exposure of the jugal that [email protected] extends far anteriorly, a tall trigonal pyramid-shaped supraorbital boss, and a recess †ORCID: along the dorsal margin of the lateral temporal fenestra. The upper Madumabisa Christian A. Sidor Mudstone Formation was deposited in a rift basin with lithofacies characterized orcid.org/0000-0003-0742-4829 Roger M. H. Smith by unchannelized flow, periods of subaerial desiccation and non-deposition, and orcid.org/0000-0001-6806-1983 pedogenesis, and can be biostratigraphically tied to the upper Cistecephalus Assemblage Zone of South Africa, suggesting a Wuchiapingian age. -
Physical and Environmental Drivers of Paleozoic Tetrapod Dispersal Across Pangaea
ARTICLE https://doi.org/10.1038/s41467-018-07623-x OPEN Physical and environmental drivers of Paleozoic tetrapod dispersal across Pangaea Neil Brocklehurst1,2, Emma M. Dunne3, Daniel D. Cashmore3 &Jӧrg Frӧbisch2,4 The Carboniferous and Permian were crucial intervals in the establishment of terrestrial ecosystems, which occurred alongside substantial environmental and climate changes throughout the globe, as well as the final assembly of the supercontinent of Pangaea. The fl 1234567890():,; in uence of these changes on tetrapod biogeography is highly contentious, with some authors suggesting a cosmopolitan fauna resulting from a lack of barriers, and some iden- tifying provincialism. Here we carry out a detailed historical biogeographic analysis of late Paleozoic tetrapods to study the patterns of dispersal and vicariance. A likelihood-based approach to infer ancestral areas is combined with stochastic mapping to assess rates of vicariance and dispersal. Both the late Carboniferous and the end-Guadalupian are char- acterised by a decrease in dispersal and a vicariance peak in amniotes and amphibians. The first of these shifts is attributed to orogenic activity, the second to increasing climate heterogeneity. 1 Department of Earth Sciences, University of Oxford, South Parks Road, Oxford OX1 3AN, UK. 2 Museum für Naturkunde, Leibniz-Institut für Evolutions- und Biodiversitätsforschung, Invalidenstraße 43, 10115 Berlin, Germany. 3 School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham B15 2TT, UK. 4 Institut