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Phylogenetic Relationships of Selected Genera of Lutjanidae Inferred from Mitochondrial Regions, with a Note on the Taxonomic Status of Pinjalo Pinjalo
Ciencias Marinas (2013), 39(4): 349–361 http://dx.doi.org/10.7773/cm.v39i4.2287 C M Phylogenetic relationships of selected genera of Lutjanidae inferred from mitochondrial regions, with a note on the taxonomic status of Pinjalo pinjalo Relaciones filogenéticas de algunos géneros de la familia Lutjanidae inferidas a partir de regiones mitocondriales, con una nota sobre la taxonomía de Pinjalo pinjalo Cecilia Chu1, Mohammed Rizman-Idid1,2*, Chong Ving Ching1,2 1 Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Lembah Pantai, Kuala Lumpur, Malaysia. 2 Institute of Ocean and Earth Sciences, University of Malaya, 50603 Lembah Pantai, Kuala Lumpur, Malaysia. * Corresponding author. Email: [email protected] ABSTRACT. Phylogenetic relationships of 43 species in 11 genera, representing four subfamilies of the family Lutjanidae and two genera of the family Caesionidae, were inferred using mitochondrial DNA (mtDNA) cytochrome c oxidase subunit I (COI). Further assessment using the mtDNA control region (CR) was carried out to infer the relationship between the Indian and western Pacific types of Lutjanus russellii collected from the coast of Peninsular Malaysia. A total of 11 and 12 species were sequenced for COI and CR genes, respectively. Clade formation reflects, to some extent, the species groupings based on morphological characteristics and their biogeography. The close phylogenetic relationship between Pinjalo pinjalo and the Lutjanus red snappers (Lutjanus malabaricus and Lutjanus sebae) warrants a taxonomic revision of the former as the two genera are currently separated based on non-exclusive morphological characters. A sequence divergence of 4.2% between the Indian and western Pacific types of L. -
Taverampe2018.Pdf
Molecular Phylogenetics and Evolution 121 (2018) 212–223 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Multilocus phylogeny, divergence times, and a major role for the benthic-to- T pelagic axis in the diversification of grunts (Haemulidae) ⁎ Jose Taveraa,b, , Arturo Acero P.c, Peter C. Wainwrightb a Departamento de Biología, Universidad del Valle, Cali, Colombia b Department of Evolution and Ecology, University of California, Davis, CA 95616, United States c Instituto de Estudios en Ciencias del Mar, CECIMAR, Universidad Nacional de Colombia sede Caribe, El Rodadero, Santa Marta, Colombia ARTICLE INFO ABSTRACT Keywords: We present a phylogenetic analysis with divergence time estimates, and an ecomorphological assessment of the Percomorpharia role of the benthic-to-pelagic axis of diversification in the history of haemulid fishes. Phylogenetic analyses were Fish performed on 97 grunt species based on sequence data collected from seven loci. Divergence time estimation Functional traits indicates that Haemulidae originated during the mid Eocene (54.7–42.3 Ma) but that the major lineages were Morphospace formed during the mid-Oligocene 30–25 Ma. We propose a new classification that reflects the phylogenetic Macroevolution history of grunts. Overall the pattern of morphological and functional diversification in grunts appears to be Zooplanktivore strongly linked with feeding ecology. Feeding traits and the first principal component of body shape strongly separate species that feed in benthic and pelagic habitats. The benthic-to-pelagic axis has been the major axis of ecomorphological diversification in this important group of tropical shoreline fishes, with about 13 transitions between feeding habitats that have had major consequences for head and body morphology. -
How to Cite Complete Issue More Information About This Article
Revista de Biología Tropical ISSN: 0034-7744 ISSN: 2215-2075 Universidad de Costa Rica Llerena-Martillo, Yasmania; Peñaherrera-Palma, César; Espinoza, Eduardo R. Fish assemblages in three fringed mangrove bays of Santa Cruz Island, Galapagos Marine Reserve Revista de Biología Tropical, vol. 66, no. 2, 2018, pp. 674-687 Universidad de Costa Rica DOI: 10.15517/rbt.v66i2.33400 Available in: http://www.redalyc.org/articulo.oa?id=44958219014 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Project academic non-profit, developed under the open access initiative Fish assemblages in three fringed mangrove bays of Santa Cruz Island, Galapagos Marine Reserve Yasmania Llerena-Martillo1, César Peñaherrera-Palma2, 3, 4 & Eduardo R. Espinoza4 1. San Francisco of Quito University – Galapagos Institute for the Arts and Sciences (GAIAS), Charles Darwin St., San Cristobal Island, Ecuador; [email protected] 2. Pontifical Catholic University of Ecuador – Manabí, Eudoro Loor St. Portoviejo, Manabí, Ecuador. 3. Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 49, Hobart, TAS, Australia; [email protected] 4. Marines Ecosystems Monitoring, Galapagos National Park Directorate, Charles Darwin St., Santa Cruz Island, Ecuador; [email protected] Received 22-VIII-2017. Corrected 19-I-2018. Accepted 12-II-2018. Abstract: Mangrove-fringed bays are highly variable ecosystems that provide critical habitats for fish species. In this study we assessed the fish assemblage in three mangrove-fringed bays (Punta Rocafuerte, Saca Calzón and Garrapatero) in the Southeast side of Santa Cruz Island, Galapagos Marine Reserve. -
Ecosystem-Based Fisheries Management of Commercially Important Species
ECOSYSTEM -BASED FISHERIES MANAGEMENT OF COMMERCIALLY IMPORTANT SPECIES : DESIGNING A NETWORK OF REFUGIOS IN BAJA CALIFORNIA SUR , MEXICO PREPARED BY RYAN ARNOTT LIAM CARR MITTY MOHON ANNA SANTOS FRANCES TOLEDO SARAH TRIMBLE CARENA J. VAN RIPER JACKIE ZIEGLER UNDER THE SUPERVISION OF DR. WILLIAM HEYMAN TEXAS A&M UNIVERSITY , DEPARTMENT OF GEOGRAPHY DOCUMENT PREPARED APRIL 2012 2 TABLE OF CONTENTS PAGES PURPOSE OF DOCUMENT 3 EXECUTIVE SUMMARY 3 1. INTRODUCTION 5 1.1. RATIONALE FOR COOPERATIVE & ADAPTIVE SPATIAL MANAGEMENT 5 1.2. SPATIAL MANAGEMENT – THE BAJA MEXICO PERSPECTIVE 6 1.3. FISHERIES OVERVIEW 7 1.4. ECOSYSTEM -BASED FISHERIES MANAGEMENT 8 1.5. STUDY OBJECTIVES 8 2. SITE DESCRIPTION 8 2.1. GEOGRAPHIC DESCRIPTION 8 2.2. PHYSICAL DESCRIPTION – GEOLOGIC SETTING 9 2.3. PHYSICAL DESCRIPTION – CLIMATE 9 2.4. PHYSICAL DESCRIPTION – OCEANOGRAPHY 9 2.5. PHYSICAL DESCRIPTION – COASTAL PEDOLOGY & VEGETATION 11 2.6. PHYSICAL DESCRIPTION – MARINE ECOSYSTEM 11 3. SOCIAL & ECONOMIC CHARACTERISTICS OF THE CORREDOR 12 3.1. LEGAL CONTEXT OF LOCALIZED FISHERIES MANAGEMENT IN THE CORREDOR 12 3.2. CORREDOR FISHERIES & COMMUNITIES 13 4. METHODOLOGY 14 4.1. SPATIAL ANALYSES 14 4.2. BIOLOGICAL & ECOLOGICAL ANALYSES 15 4.3. CASE STUDIES 15 5. RESULTS & DISCUSSION 15 5.1 BIOPHYSICAL DESCRIPTION & BATHYMETRY 15 5.2. SPATIAL COMPARISON OF FISHER GENERATED MAPS WITH SELECTED 18 ECOLOGICAL CRITERIA 5.3. CASE STUDIES 19 6. CONSIDERATIONS 24 6.1. ECOLOGICAL CONSIDERATIONS 24 6.2. GOVERNANCE CONSIDERATIONS 24 6.3. CASE STUDY LESSONS & CONSIDERATIONS 25 7. MANAGEMENT IMPLICATIONS 26 7.1. ECOLOGICAL TOOLS TO ENHANCE CONSERVATION 26 7.2. GOVERNANCE TOOLS TO ENHANCE CONSERVATION 26 7.3. -
Perciformes: Haemulidae) Inferred Using Mitochondrial and Nuclear Genes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/256288239 A molecular phylogeny of the Grunts (Perciformes: Haemulidae) inferred using mitochondrial and nuclear genes Article in Zootaxa · June 2011 DOI: 10.11646/zootaxa.2966.1.4 CITATIONS READS 35 633 3 authors, including: Millicent D Sanciangco Luiz A Rocha Old Dominion University California Academy of Sciences 26 PUBLICATIONS 1,370 CITATIONS 312 PUBLICATIONS 8,691 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Mesophotic Coral Reefs View project Vitória-Trindade Chain View project All content following this page was uploaded by Luiz A Rocha on 20 May 2014. The user has requested enhancement of the downloaded file. Zootaxa 2966: 37–50 (2011) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2011 · Magnolia Press ISSN 1175-5334 (online edition) A molecular phylogeny of the Grunts (Perciformes: Haemulidae) inferred using mitochondrial and nuclear genes MILLICENT D. SANCIANGCO1, LUIZ A. ROCHA2 & KENT E. CARPENTER1 1Department of Biological Sciences, Old Dominion University, Mills Godwin Building, Norfolk, VA 23529 USA. E-mail: [email protected], [email protected] 2Marine Science Institute, University of Texas at Austin, 750 Channel View Dr., Port Aransas, TX 78373, USA. E-mail: [email protected] Abstract We infer a phylogeny of haemulid genera using mitochondrial COI and Cyt b genes and nuclear RAG1, SH3PX3, and Plagl2 genes from 56 haemulid species representing 18 genera of the expanded haemulids (including the former inermiids) and ten outgroup species. Results from maximum parsimony, maximum likelihood, and Bayesian analyses show strong support for a monophyletic Haemulidae with the inclusion of Emmelichthyops atlanticus. -
Tidal, Diel and Seasonal Effects on Intertidal Mangrove Fish in a High-Rainfall Area of the Tropical Eastern Pacific
Vol. 494: 249–265, 2013 MARINE ECOLOGY PROGRESS SERIES Published December 4 doi: 10.3354/meps10512 Mar Ecol Prog Ser Tidal, diel and seasonal effects on intertidal mangrove fish in a high-rainfall area of the Tropical Eastern Pacific G. A. Castellanos-Galindo1,2,3,*, U. Krumme1,2,4 1Leibniz Center for Tropical Marine Ecology (ZMT), Fahrenheitstrasse 6, 28359 Bremen, Germany 2Centre of Excellence in Marine Sciences (CEMarin), Cra. 2 No. 11-68, 47004 Santa Marta, Colombia 3Grupo de Investigación en Ecología de Estuarios y Manglares, Departmento de Biología, Universidad del Valle, A. A. 25360, Cali, Colombia 4Thünen Institute of Baltic Sea Fisheries (TI-OF), Alter Hafen Süd 2, 18069 Rostock, Germany ABSTRACT: Mangroves are recognized as nursery areas for a large number of marine organisms. Yet many properties of this nursery function and its equivalence between geographical areas remain poorly understood, especially in macrotidal estuarine systems. In this study, we investi- gated the influence of tides, diel and seasonal variation on intertidal mangrove fish assemblages in a high-rainfall area of the Tropical Eastern Pacific region. Over one year, block net sampling was undertaken during spring and neap tides during both night and day. Four sites along the length of a subtidal channel were sampled to account for salinity gradients. Clupeidae dominated catch abundances of a 50 species-rich assemblage. Catch weights, however, were dominated by Lutjanidae, Tetraodontidae and Ariidae. Fish biomass was low, likely as a result of a poor benthic in- and epi-faunal biomass in a mangrove system of low nutrient status and extremely rainy con- ditions. -
(Platyhelminthes) Parasitic in Mexican Aquatic Vertebrates
Checklist of the Monogenea (Platyhelminthes) parasitic in Mexican aquatic vertebrates Berenit MENDOZA-GARFIAS Luis GARCÍA-PRIETO* Gerardo PÉREZ-PONCE DE LEÓN Laboratorio de Helmintología, Instituto de Biología, Universidad Nacional Autónoma de México, Apartado Postal 70-153 CP 04510, México D.F. (México) [email protected] [email protected] (*corresponding author) [email protected] Published on 29 December 2017 urn:lsid:zoobank.org:pub:34C1547A-9A79-489B-9F12-446B604AA57F Mendoza-Garfi as B., García-Prieto L. & Pérez-Ponce De León G. 2017. — Checklist of the Monogenea (Platyhel- minthes) parasitic in Mexican aquatic vertebrates. Zoosystema 39 (4): 501-598. https://doi.org/10.5252/z2017n4a5 ABSTRACT 313 nominal species of monogenean parasites of aquatic vertebrates occurring in Mexico are included in this checklist; in addition, records of 54 undetermined taxa are also listed. All the monogeneans registered are associated with 363 vertebrate host taxa, and distributed in 498 localities pertaining to 29 of the 32 states of the Mexican Republic. Th e checklist contains updated information on their hosts, habitat, and distributional records. We revise the species list according to current schemes of KEY WORDS classifi cation for the group. Th e checklist also included the published records in the last 11 years, Platyhelminthes, Mexico, since the latest list was made in 2006. We also included taxon mentioned in thesis and informal distribution, literature. As a result of our review, numerous records presented in the list published in 2006 were Actinopterygii, modifi ed since inaccuracies and incomplete data were identifi ed. Even though the inventory of the Elasmobranchii, Anura, monogenean fauna occurring in Mexican vertebrates is far from complete, the data contained in our Testudines. -
Spawning Aggregations and Reproductive Behavior of Reef Fishes in the Gulf of California
BULLETIN OFMARINI SCIENCE,72(I): 103 121 20(03 SPAWNING AGGREGATIONS AND REPRODUCTIVE BEHAVIOR OF REEF FISHES IN THE GULF OF CALIFORNIA Enric Sala, Octavio Aburto-Oropeza, Gustavo Paredes and Glenn Thompson ABSTRACT Spawning aggregations numbering up to tens of thousands of reef fishes have disap- peared throughout the tropics due to fishing, causing the collapse of their populations and of commercial fisheries in many regions. Although there is a wealth of information on spawning aggregations in the Caribbean and the Indopacific, there are almost no data on spawning aggregations of commercial reef fishes in the Tropical Eastern Pacific. Here we describe aggregations and the reproductive behavior of eight species of reef fishes in the Gulf of California, Mexico. The serranids Mvcteroperca prionura and M. rosacea, the snapper Lut/anus noverntiAsciatus, and the jacks Caranxsefrfisciatus and Seriola lalandi form spawning aggregations of 12 to > 1000 individuals on islands, exposed coastal rocky reefs, and seamounts. The serranids Parantihiascolonus and the snapper L. argentiventris spawn in schools with densities similar to these during non-reproductive periods. We observed aggregations of the serranid M. jordani but did not observe spawning. Some spawning aggregations of these and other species (such as Epinephelus itajara and Stereolepis gigas) have now disappeared from the Gulf of California due to fishing. Our findings suggest the existence of undocumented spawning aggregations throughout the Tropical Eastern Pacific that sustain varied levels of fishing pressure. These spawning aggregations must be identified and protected in order to ensure the replenishment of fish populations. Many species of reef fishes, including groupers, snappers, andjacks, aggregate to spawn at specific locations and times throughout the tropics (e.g., Johannes, 1978a; Carter et al., 1994; Carter and Perrine, 1994; Sadovy, 1994; Domeier and Colin, 1997). -
Global Affiliation of Juvenile Fishes and Invertebrates with Mangrove Habitats
Edinburgh Research Explorer Global affiliation of juvenile fishes and invertebrates with mangrove habitats Citation for published version: Zu Ermgassen, PS, Grove, T & Nagelkerken, I 2019, 'Global affiliation of juvenile fishes and invertebrates with mangrove habitats', Bulletin of Marine Science, vol. 96, no. 3. https://doi.org/10.5343/bms.2019.0044 Digital Object Identifier (DOI): 10.5343/bms.2019.0044 Link: Link to publication record in Edinburgh Research Explorer Document Version: Peer reviewed version Published In: Bulletin of Marine Science General rights Copyright for the publications made accessible via the Edinburgh Research Explorer is retained by the author(s) and / or other copyright owners and it is a condition of accessing these publications that users recognise and abide by the legal requirements associated with these rights. Take down policy The University of Edinburgh has made every reasonable effort to ensure that Edinburgh Research Explorer content complies with UK legislation. If you believe that the public display of this file breaches copyright please contact [email protected] providing details, and we will remove access to the work immediately and investigate your claim. Download date: 07. Oct. 2021 rsmas.miami.edu/bms Bulletin of Marine Science Accepted Manuscript Title: Global affiliation of juvenile fishes and invertebrates with mangrove habitats Authors: Zu Ermgassen PSE, Grove T, Nagelkerken I DOI: https://doi.org/10.5343/bms.2019.0044 Date submitted: 21 March, 2019 Date accepted: 10 October, 2019 Available online: 18 October, 2019 Citation: Zu Ermgassen PSE, Grove T, Nagelkerken I. In Press. Global affiliation of juvenile fishes and invertebrates with mangrove habitats. -
Published Records Revista De Biología Tropical, Vol
Revista de Biología Tropical ISSN: 0034-7744 [email protected] Universidad de Costa Rica Costa Rica Cortés, Jorge; Vargas-Castillo, Rita; Nivia-Ruiz, Jaime Marine biodiversity of Bahía Culebra, Guanacaste, Costa Rica: published records Revista de Biología Tropical, vol. 60, núm. 2, abril, 2012, pp. 39-71 Universidad de Costa Rica San Pedro de Montes de Oca, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44923906003 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Marine biodiversity of Bahía Culebra, Guanacaste, Costa Rica: published records Jorge Cortés1, 2, Rita Vargas-Castillo3 & Jaime Nivia-Ruiz1 1. Centro de Investigación en Ciencias del Mar y Limnología (CIMAR), Universidad de Costa Rica, San Pedro, 11501- 2060 San José, Costa Rica; jorge.corté[email protected] 2. Escuela de Biología, Universidad de Costa Rica, San Pedro, 11501-2060 San José, Costa Rica 3. Museo de Zoología, Universidad de Costa Rica, San Pedro, 11501-2060 San José, Costa Rica; [email protected] Received 23-II-2011. Corrected 28-XI-2011. Accepted 15-II-2012. Abstract: A survey of the published records of marine organisms of Bahía Culebra, an enclosed embayment on the north Pacific coast of Costa Rica, is analyzed resulting in a list of 577 species representing 22 phyla. The most diverse groups documented were crustaceans, cnidarians and mollusks in order of species number. The first published record of any marine organism from the area, a polychaete, occurred in 1922, with a peak of published records of species between 1940 and 1949 and, more recently, from 2000 to the present. -
Ken Schultz's Field Guide to Saltwater Fish
ffirs.qxd 10/31/03 9:25 AM Page iii • • • • KEN SCHULTZ’S Field Guide to Saltwater Fish by Ken Schultz JOHN WILEY & SONS, INC. ffirs.qxd 10/31/03 9:25 AM Page i • • • • KEN SCHULTZ’S Field Guide to Saltwater Fish ffirs.qxd 10/31/03 9:25 AM Page ii ffirs.qxd 10/31/03 9:25 AM Page iii • • • • KEN SCHULTZ’S Field Guide to Saltwater Fish by Ken Schultz JOHN WILEY & SONS, INC. ffirs.qxd 10/31/03 9:25 AM Page iv This book is printed on acid-free paper. Copyright © 2004 by Ken Schultz. All rights reserved Published by John WIley & Sons, Inc., Hoboken, New Jersey Published simultaneously in Canada Design and production by Navta Associates, Inc. No part of this publication may be reproduced, stored in a retrieval system, or trans- mitted in any form or by any means, electronic, mechanical, photocopying, recording, scanning, or otherwise, except as permitted under Section 107 or 108 of the 1976 United States Copyright Act, without either the prior written permission of the Pub- lisher, or authorization through payment of the appropriate per-copy fee to the Copy- right Clearance Center, 222 Rosewood Drive, Danvers, MA 01923, (978) 750-8400, fax (978) 750-4470, or on the web at www.copyright.com. Requests to the Publisher for permission should be addressed to the Permissions Department, John Wiley & Sons, Inc., 111 River Street, Hoboken, NJ 07030, (201) 748-6011, fax (201) 748-6008, email: [email protected]. Limit of Liability/Disclaimer of Warranty: While the publisher and the author have used their best efforts in preparing this book, they make no representations or warranties with respect to the accuracy or completeness of the contents of this book and specifi- cally disclaim any implied warranties of merchantability or fitness for a particular purpose. -
Marine Fishes of Acapulco, Mexico (Eastern Pacific Ocean)
Mar Biodiv (2014) 44:471–490 DOI 10.1007/s12526-014-0209-4 ORIGINAL PAPER Marine fishes of Acapulco, Mexico (Eastern Pacific Ocean) Deivis S. Palacios-Salgado & Arturo Ramírez-Valdez & Agustín A. Rojas-Herrera & Jasmin Granados Amores & Miguel A. Melo-García Received: 9 February 2013 /Revised: 4 February 2014 /Accepted: 5 February 2014 /Published online: 6 March 2014 # Senckenberg Gesellschaft für Naturforschung and Springer-Verlag Berlin Heidelberg 2014 Abstract A comprehensive systematic checklist of the ma- distribution that includes the Cortez and Panamic provinces, rine ichthyofauna of Acapulco Bay and its adjacent coastal and 19.3 % of the species have a wide distribution that zone is presented. The information was obtained from field encompasses from the San Diegan to the Panamic province. surveys using several methods, including: visual censuses, Four species are endemic to the Mexican province (Pareques video-transects, subaquatic photography, and spearfishing fuscovittatus, Malacoctenus polyporosus, Paraclinus captures; anesthesia of fish associated with reef ecosystems; stephensi and Stathmonotus lugubris), while Enneanectes gill-nets and beach seines; fish associated with oyster seed reticulatus and Paraclinus monophthalmus are endemic to collectors; and fish caught by local fishermen. The checklist the Cortez and Panamic provinces, respectively, and represent comprises 292 species from 192 genera, 82 families, 33 or- new records for the Mexican central Pacific. The ichthyofauna ders, and 2 classes. The families with the highest