TAXON — 4 Aug 2017: 18 pp. Aparicio & al. • The phylogeny of Helianthemum (Cistaceae) Phylogenetic reconstruction of the genus Helianthemum (Cistaceae) using plastid and nuclear DNA-sequences: Systematic and evolutionary inferences Abelardo Aparicio,1 Sara Martín-Hernanz,1 Clara Parejo-Farnés,1 Juan Arroyo,2 Sébastien Lavergne,3 Emine B. Yeşilyurt,4 Ming-Li Zhang,5 Encarnación Rubio1 & Rafael G. Albaladejo1 1 Departamento de Biología Vegetal y Ecología, Universidad de Sevilla, c/ Profesor García González nº 2, 41012 Sevilla, Spain 2 Departamento de Biología Vegetal y Ecología, Universidad de Sevilla, Apartado 1095, 41080 Sevilla, Spain 3 Laboratoire d’Ecologie Alpine, CNRS – Universite Grenoble Alpes, BP 53, 38041 Grenoble Cedex 9, France 4 Department of Biology, Faculty of Science, University of Hacettepe, 06800, Beytepe, Ankara, Turkey 5 Institute of Botany, Chinese Academy of Sciences, Xiangshan, Beijing, 100093, China Author for correspondence: Sara Martín-Hernanz,
[email protected] ORCID AA, http://orcid.org/0000-0001-7122-4421; SMH, http://orcid.org/0000-0001-9881-9919 DOI https://doi.org/10.12705/664.5 Abstract Helianthemum is the largest, most widely distributed and most taxonomically complex genus of the Cistaceae. To examine the intrageneric phylogenetic relationships in Helianthemum, we used sequence data from plastid DNA (ndhF, psbA-trnH, trnL- trnF) and the nuclear ITS region. The ingroup consisted of 95 species and subspecies (2 subgenera, 10 sections) from throughout the range of Helianthemum, while the outgroup was composed of 30 species representing all the genera in the Cistaceae (Cistus Crocanthemum, Fumana, Halimium, Hudsonia, Lechea, Tuberaria) plus Anisoptera thurifera subsp. polyandra (Dipterocarpaceae). To infer phylogenetic relationships, we analysed three different matrices (cpDNA, nrDNA, cpDNA + nrDNA concatenated) using maximum likelihood and Bayesian inference, and performed molecular dating to estimate the ages of origin of the main clades using a Bayesian approach.