Applied Metaphysics Katherine Hawley May 2015 Accepted for Publication; Not Yet Copy-Edited Or Cross-Referenced to Other Chapters
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Functions in Basic Formal Ontology
Applied Ontology 11 (2016) 103–128 103 DOI 10.3233/AO-160164 IOS Press Functions in Basic Formal Ontology Andrew D. Spear a,∗, Werner Ceusters b and Barry Smith c a Philosophy Department, Grand Valley State University, 1 Campus Drive, Allendale, MI 49401, USA Tel.: +1 616 331 2847; Fax: +1 616 331 2601; E-mail: [email protected] b Departments of Biomedical Informatics and Psychiatry, University at Buffalo, 77 Goodell street, Buffalo, NY 14203, USA E-mail: [email protected] c Department of Philosophy, University at Buffalo, 135 Park Hall, Buffalo, NY 14260, USA E-mail: [email protected] Abstract. The notion of function is indispensable to our understanding of distinctions such as that between being broken and being in working order (for artifacts) and between being diseased and being healthy (for organisms). A clear account of the ontology of functions and functioning is thus an important desideratum for any top-level ontology intended for application to domains such as engineering or medicine. The benefit of using top-level ontologies in applied ontology can only be realized when each of the categories identified and defined by a top-level ontology is integrated with the others in a coherent fashion. Basic Formal Ontology (BFO) has from the beginning included function as one of its categories, exploiting a version of the etiological account of function that is framed at a level of generality sufficient to accommodate both biological and artifactual functions. This account has been subjected to a series of criticisms and refinements. We here articulate BFO’s account of function, provide some reasons for favoring it over competing views, and defend it against objections. -
Comments on Sider's Four Dimensionalism
Sally Haslanger MIT Department of Linguistics and Philosophy [email protected] 12/30/03 Comments on Sider I. Introduction Congratulations to Ted on the APA Prize. Ted’s book Four Dimensionalism is an impressive piece of work, and it is an honor to be included in this session. The book is a paradigm of systematic work in analytic metaphysics. It demonstrates a comprehensive understanding of a variety of debates over time, persistence, material constitution, as well as a sensitivity to background issues concerning methodology in metaphysics. It is a significant accomplishment. I’ll start by giving a very brief summary of Sider’s position and will identify some points on which my own position differs from his. I’ll then raise four issues, viz., how to articulate the 3-dimensionalist view, the trade-offs between Ted’s stage view of persistence and endurance with respect to intrinsic properties, the endurantist’s response to the argument from vagueness, and finally more general questions about what’s at stake in the debate. I don’t believe that anything I say raises insurmountable problems for Sider’s view; and in fact, I’m sure he’s in a better position to defend his view more convincingly than I’m able to defend mine. However, there is plenty worth discussing further. Sider defends what he calls “four dimensionalism,” but we should start by being clear how he understands this position.1 He defines “four dimensionalism” as “an ontology of the material world according to which objects have temporal as well as spatial parts.” (xiii) So the thesis of four-dimensionalism Sider is interested in is a thesis about objects and their parts. -
A Definition of Ontological Category
Two Demarcation Problems In Ontology Pawel Garbacz Department of Philosophy John Paul II Catholic University of Lublin, Poland Abstract his or her research interests. Or if not, then everything goes into the scope. In this paper I will attempt to characterise the difference be- This paper is then about the proper subject matter of ap- tween ontological and non-ontological categories for the sake of a better understanding of the subject matter of ontology. plied ontology. I will attempt to draw a demarcation line My account of ontological categories defines them as equiva- between ontological and non-ontological categories. To this lence classes of a certain family of equivalence relations that end I will search for the proper level of generality of the lat- are determined by ontological relations. As a result, the de- ter by looking at how philosophical ontology defines its sub- marcation problem for ontological categories turns out to be ject matter. I will discuss a number of attempts to capture the dependent on the demarcation problem for ontological rela- specific nature of the ontological categories, as they are used tions. in philosophy, and on the basis of this survey I outline my own proposal. The main point of my contribution is the idea Introduction that ontological categories are the most general categories that cut the reality at its joints, where cutting is provided There are a lot of ontologies out there. (Ding et al., 2005) by ontological relations. In consequence it will turn out that claim to harvest from the Internet more than 300 000 Se- this account depends on how one can draw a demarcation mantic Web documents, of which 1.5% may be unique on- line between ontological and non-ontological relations. -
GMS 6805: Introduction to Applied Ontology Location
GMS 6805: Introduction to Applied Ontology Location: Online, TBA Class Hours: Wednesdays 1:55-3:50 pm Instructor: Mathias Brochhausen, PhD Office: 3226, Clinical and Translational Science Building Email: [email protected] Phone: 501-831-3119 Office Hours: By Appointment Course Description: Applied ontology is a sub-discipline of knowledge representation that develops resources that make the meaning of terms processable by computers to improve interoperability of data and to support reasoning with digital knowledge bases. This course introduces students to the fundamentals of applied ontology and its role in biomedical informatics. Students will learn what ontologies are, how they differ from similar resources and how they are implemented in knowledge management environments. Course Prerequisites: None, but PHI 6105: Seminar in Logic, or experience with symbolic logic, is an asset. Course Objectives: • Describe the need for semantic integration of biomedical data • Identify the components of the Semantic Web technology and the goals of Semantic Web Technologies • Describe how ontologies fit into the Semantic Web paradigm and the role of Applied Ontology within in • Understand the computational principles behind ontology development and implementation • Describe how ontological artifacts differ terminologies and other semantic resources • Articulate standards and criteria for good ontologies and evaluate ontologies in light of these criteria • Illustrate common pitfalls of ontology development • Create a domain ontology in an ontology editor such as Protégé • Construct queries that demonstrate an understanding of the logical principles of ontologies and the Semantic Web Course Texts: Required Tests: Antoniou, G. (2012). A Semantic Web Primer. Cambridge, MA: The MIT Press. Arp, R. et al. -
Ontology, Ontologies, and Science
Ontology, Ontologies, and Science Gary H. Merrill This is the “final accepted version” of the manuscript, made publicly available in accord with the policies of SpringerNature. The final publication in the journal Topoi (April 2011, Volume 30, Issue 1, pp 71–83) is available via http://dx.doi.org/10.1007/s11245-011-9091-x ABSTRACT Philosophers frequently struggle with the relation of metaphysics to the everyday world, with its practical value, and with its relation to empirical science. This paper distinguishes several different models of the relation between philosophical ontology and applied (scientific) ontology that have been advanced in the history of philosophy. Adoption of a strong participation model for the philosophical ontologist in science is urged, and requirements and consequences of the participation model are explored. This approach provides both a principled view and justification of the role of the philosophical ontologist in contemporary empirical science as well as guidelines for integrating philosophers and philosophical contributions into the practice of science. Introduction Metaphysicians, when explaining or justifying their calling, tend to be a mournful and defensive lot while at the same time extolling the intellectual, moral, and spiritual virtues of metaphysics and its practice. A classic example is found in Russell's The Problems of Philosophy where he argues that philosophy as a discipline is not quite as fruitless as it may appear: Philosophy, like all other studies, aims primarily at knowledge.... But it cannot be maintained that philosophy has had any very great measure of success in its attempts to provide definite answers to its questions.... It is true that this is partly accounted for by the fact that as soon as definite knowledge concerning any subject becomes possible, this subject ceases to be called philosophy, and becomes a separate science... -
Ontology-Based Approach for Structural Design Considering Low Embodied Energy and Carbon
This is an Open Access document downloaded from ORCA, Cardiff University's institutional repository: http://orca.cf.ac.uk/73163/ This is the author’s version of a work that was submitted to / accepted for publication. Citation for final published version: Hou, Shangjie, Li, Haijiang and Rezgui, Yacine 2015. Ontology-based approach for structural design considering low embodied energy and carbon. Energy and Buildings 102 , pp. 75-90. 10.1016/j.enbuild.2015.04.051 file Publishers page: http://dx.doi.org/10.1016/j.enbuild.2015.04.051 <http://dx.doi.org/10.1016/j.enbuild.2015.04.051> Please note: Changes made as a result of publishing processes such as copy-editing, formatting and page numbers may not be reflected in this version. For the definitive version of this publication, please refer to the published source. You are advised to consult the publisher’s version if you wish to cite this paper. This version is being made available in accordance with publisher policies. See http://orca.cf.ac.uk/policies.html for usage policies. Copyright and moral rights for publications made available in ORCA are retained by the copyright holders. Accepted Manuscript Title: Ontology-based approach for structural design considering low embodied energy and carbon Author: Shangjie Hou Haijiang Li Yacine Rezgui PII: S0378-7788(15)00350-3 DOI: http://dx.doi.org/doi:10.1016/j.enbuild.2015.04.051 Reference: ENB 5843 To appear in: ENB Received date: 14-11-2014 Revised date: 21-4-2015 Accepted date: 28-4-2015 Please cite this article as: S. -
Introduction to Applied Ontology and Ontological Analysis
First Interdisciplinary Summer School on Ontological Analysis Introduction to Applied Ontology and Ontological Analysis Nicola Guarino National Research Council, Institute for Cognitive Science and Technologies (ISTC-CNR) Laboratory for Applied Ontology (LOA) www.loa.istc.cnr.it Applied Ontology: an emerging interdisciplinary area • Applied Ontology builds on philosophy, cognitive science, linguistics and logic with the purpose of understanding, clarifying, making explicit and communicating people's assumptions about the nature and structure of the world. • This orientation towards helping people understanding each other distinguishes applied ontology from philosophical ontology, and motivates its unavoidable interdisciplinary nature. ontological analysis: study of content (of these assumptions) as such (independently of their representation) 4 Ontological analysis and conceptual modeling Conceptual modeling is the activity of formally describing some aspects of the physical and social world around us for the purposes of understanding and communication (John Mylopoulos) Focusing on content Do we know what to REpresent? • First analysis, • THEN representation… Unfortunately, this is not the current practice… • Computer scientists have focused on the structure of representations and the nature of reasoning more than on the content of such representations Essential ontological promiscuity of AI: any agent creates its own ontology based on its usefulness for the task at hand (Genesereth and Nilsson 1987) No representation without ontological -
Musical Works: Category and Identity
1 Musical Works: Category and Identity A thesis submitted to the University of Manchester for the degree of Doctor of Philosophy (Ph.D.) In the Faculty of Humanities 2013 Philip Letts School of Social Sciences 2 Contents Abstract ........................................................................................................................... 7 Declaration ...................................................................................................................... 8 Copyright Statement ........................................................................................................ 8 Acknowledgments ........................................................................................................... 9 Part 1: Category ............................................................................................................. 10 Chapter 1: The Project ................................................................................................... 10 1: Introduction ............................................................................................................... 10 2: Answering the Categorial Question .......................................................................... 12 2.1: The Music Internal Problem ................................................................................... 14 2.2: The Central Judgments Concerning Musical Works .............................................. 17 2.3: The External Problem ............................................................................................ -
David Lewis on Persistence1 Katherine Hawley University of St Andrews
David Lewis on Persistence1 Katherine Hawley University of St Andrews David Lewis takes a clear stance on persistence: Next, persistence through time. I take the view that nothing endures identically through time. (Except universals, if such there be; their loci would coincide with relations of qualitative match, would indeed constitute these relations, so they would commit no violations of Humean Supervenience.) Persisting particulars consist of temporal parts, united by various kinds of continuity. To the extent that the continuity is spatiotemporal and qualitative, of course it supervenes upon the arrangement of qualities. But the continuity that often matters most is causal continuity: the thing stays more or less the same because of the way its later temporal parts depend causally for their existence and character on the ones just before. So the spatiotemporal boundaries of persisting things, for example people, can supervene on the arrangement of qualities, provided that causation does. (Lewis, 1986b, xiii) To persist is to exist at more than one time, to transcend the momentary. How do things achieve this? We might answer with talk of thermodynamic stability, molecular bonds, photosynthesis, the porcupine’s spines, German manufacturing standards, legal protection of ancient monuments, or the uncanny ability of children to extract care from their parents. In Lewis’s terms, such answers explain the existence of spatiotemporal and qualitative continuities over time in causal terms, by reference either to the causal mechanisms which directly underpin such continuities, or to their preconditions and external circumstances. Explanations may differ according to the kind of object in question: German washing machines and yew trees are both long- lasting, relative to other types of appliance or tree respectively, but the reasons for their longevity are quite different. -
Natural Language and Its Ontology
1 To appear in A. Goldman/B. McLaughlin (eds): Metaphysics and Cognitive Science, Oxford University Press 2018 Natural Language and its Ontology Friederike Moltmann final version September 25, 2017 Abstract Natural language reflects its own ontology, an ontology that may differ from the ontology a philosopher may be willing to accept or even a non-philosopher when thinking about what there is, and of course it may differ from the ontology of what there really is. This paper gives a characterization of the ontology implicit in natural language and the entities it involves, situates natural language ontology within metaphysics, discusses what sorts of data may be considered reflective of the ontology of natural language, and addresses Chomsky's dismissal of externalist semantics. Key words ontology, natural language, reference, descriptive metaphysics, variable objects, tropes, kinds, existence, Chomsky, Fine Introduction Natural language, it appears, reflects in part our conception of the world. Natural language displays a great range of types of referential noun phrases that seem to stand for objects of various ontological categories and types, and it also involves constructions, categories and expressions that appear to convey ontological or metaphysical notions, for example ontological categories of various sorts, plurality, quantity, identity, causation, parthood, truth, and existence. But it also appears that natural language reflects ontological categories, structures, and notions that not everyone may be willing to accept, certainly not every philosopher, but often not even an ordinary person when thinking about what there is and the general nature of things. Most notably, natural language appears to involve a wealth of terms that display a rich ontology of artefactual, derivative, minor, abstract, and even nonexistent entities that philosophers generally tend to reject and even an ordinary person when thinking about what 2 there really is. -
Applied Ontology
Nouslerter Page' Applied Ontology: A New Discipline is Born he following appeared (in Ital dictions and inconsistencies often arise in life forms expressions, which ought to be af ian) in the distinguished Ital the law when, for instance, one type of en forded the protection of intellectual prop T ian newspaper Il Sole-24 Ore tity is forced into two mutually exclusive erty law? If so, are they expressions of the (said to be Italian equivalent categories (e.g., when software is consid sort which may be patented, or are they of the Wall Street Journal)on Sunday May ered to be both patentable and copy expressions of the sort which may be copy 24, 1998, as part of a full-page spread on rightable)." righted? The answers to such questions the Department's Marvin Farber Confer The growth in importance of ontology must reflect ethical, economic and other ence held in April: turns on the fact that, in an age of rapid considerations. But the questions them technological progress, legislators, jurists selves are ontological: they are questions The discipline of applied ethics already has and lawyers must grapple with constantly about how given entities are properly to be a certain familiarity in the Anglo-Saxon changing domains of objects. The expan categorized, and the task of providing an~ · world, above all through the work of Peter sion of trading blocks and treaty organiza swers to such questions can be aided Singer. Applied ethics uses the tools of tions, and the concomitant growth in im through the development of legal moral philosophy to resolve practical prob portance of international law, have sub ontological theories, theories of inrellel.'"tual lems of the sort which arise, for example, jected the processes oflaw-making and en property law, of artefacts, and of biological in the running of hospitals. -
Katherine Hawley [email protected]; +44 1334 462469; University of St Andrews, St Andrews, KY16 9AJ, UK (Full Version, Last Updated June 2015)
CV – Katherine Hawley [email protected]; +44 1334 462469; University of St Andrews, St Andrews, KY16 9AJ, UK (Full version, last updated June 2015) 2008-present Professor of Philosophy, University of St Andrews. 1999-2008 Lecturer, then Senior Lecturer, University of St Andrews. (Spring 2003 Gillespie (Associate) Professor, College of Wooster, Ohio.) 1997-1999 Sidgwick Research Fellow, Newnham College Cambridge. 1994-1997 Ph.D., University of Cambridge (graduated June 1998). 1993-1994 M.Phil., History and Philosophy of Science, University of Cambridge. 1989-1992 B.A. Hons., Physics and Philosophy, University of Oxford. Major Responsibilities 2014 Deputy Chair of Philosophy REF panel 2009-2014 Head of School of Philosophical, Anthropological and Film Studies, University of St Andrews 2005-2010 Editorial Chair, Philosophical Quarterly 2008 Member of Philosophy RAE panel (For other editorial work, committee service and responsibilities, see below.) Grants and Prizes Leverhulme Major Research Fellowship, 2014-16 (£94,445) Local PI for Marie Curie Initial Training Network 2009-2013 (value to St Andrews around £153K). AHRB Research Leave award 2004 (£13,153). Philip Leverhulme Prize 2003 (Research prize of £50,000) British Academy Joint Activities grant (£4,500 to fund collaboration with philosophers at the University of Western Washington during 2003-5). Authored Books Trust: A Very Short Introduction, Oxford: Oxford University Press (2012) (121 pp.) How Things Persist, Oxford: Oxford University Press (2001) (xi + 221 pp.) Selections reprinted in Haslanger and Fay (eds.) Persistence, MIT Press (2004). Co-Edited Books The Admissible Contents of Perception, edited with Fiona MacPherson, Oxford: Wiley- Blackwell (2011). Re-issue of Philosophical Quarterly special issue 59.236, with a new introduction sole-authored by FM.