Optimizing Binary Heaps
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Cache Oblivious Search Trees Via Binary Trees of Small Height
Cache Oblivious Search Trees via Binary Trees of Small Height Gerth Stølting Brodal∗ Rolf Fagerberg∗ Riko Jacob∗ Abstract likely to increase in the future [13, pp. 7 and 429]. We propose a version of cache oblivious search trees As a consequence, the memory access pattern of an which is simpler than the previous proposal of Bender, algorithm has become a key component in determining Demaine and Farach-Colton and has the same complex- its running time in practice. Since classic asymptotical ity bounds. In particular, our data structure avoids the analysis of algorithms in the RAM model is unable to use of weight balanced B-trees, and can be implemented capture this, a number of more elaborate models for as just a single array of data elements, without the use of analysis have been proposed. The most widely used of pointers. The structure also improves space utilization. these is the I/O model of Aggarwal and Vitter [1], which For storing n elements, our proposal uses (1 + ε)n assumes a memory hierarchy containing two levels, the times the element size of memory, and performs searches lower level having size M and the transfer between the in worst case O(logB n) memory transfers, updates two levels taking place in blocks of B elements. The in amortized O((log2 n)/(εB)) memory transfers, and cost of the computation in the I/O model is the number range queries in worst case O(logB n + k/B) memory of blocks transferred. This model is adequate when transfers, where k is the size of the output. -
Lecture 04 Linear Structures Sort
Algorithmics (6EAP) MTAT.03.238 Linear structures, sorting, searching, etc Jaak Vilo 2018 Fall Jaak Vilo 1 Big-Oh notation classes Class Informal Intuition Analogy f(n) ∈ ο ( g(n) ) f is dominated by g Strictly below < f(n) ∈ O( g(n) ) Bounded from above Upper bound ≤ f(n) ∈ Θ( g(n) ) Bounded from “equal to” = above and below f(n) ∈ Ω( g(n) ) Bounded from below Lower bound ≥ f(n) ∈ ω( g(n) ) f dominates g Strictly above > Conclusions • Algorithm complexity deals with the behavior in the long-term – worst case -- typical – average case -- quite hard – best case -- bogus, cheating • In practice, long-term sometimes not necessary – E.g. for sorting 20 elements, you dont need fancy algorithms… Linear, sequential, ordered, list … Memory, disk, tape etc – is an ordered sequentially addressed media. Physical ordered list ~ array • Memory /address/ – Garbage collection • Files (character/byte list/lines in text file,…) • Disk – Disk fragmentation Linear data structures: Arrays • Array • Hashed array tree • Bidirectional map • Heightmap • Bit array • Lookup table • Bit field • Matrix • Bitboard • Parallel array • Bitmap • Sorted array • Circular buffer • Sparse array • Control table • Sparse matrix • Image • Iliffe vector • Dynamic array • Variable-length array • Gap buffer Linear data structures: Lists • Doubly linked list • Array list • Xor linked list • Linked list • Zipper • Self-organizing list • Doubly connected edge • Skip list list • Unrolled linked list • Difference list • VList Lists: Array 0 1 size MAX_SIZE-1 3 6 7 5 2 L = int[MAX_SIZE] -
[Type the Document Title]
International Journal of Engineering Science Invention (IJESI) ISSN (Online): 2319 – 6734, ISSN (Print): 2319 – 6726 www.ijesi.org || PP. 31-35 Parallel and Nearest Neighbor Search for High-Dimensional Index Structure of Content-Based Data Using Dva-Tree A.RosiyaSusaiMary1, Dr.R.Suguna 2 1(Department of Computer Science, Theivanai Ammal College for Women, India) 2(Department of Computer Science, Theivanai Ammal College for Women, India) Abstract: We propose a parallel high-dimensional index structure for content-based information retrieval so as to cope with the linear decrease in retrieval performance. In addition, we devise data insertion, range query and k-NN query processing algorithms which are suitable for a cluster-based parallel architecture. Finally, we show that our parallel index structure achieves good retrieval performance in proportion to the number of servers in the cluster-based architecture and it outperforms a parallel version of the VA-File. To address the demanding search needs caused by large-scale image collections, speeding up the search by using distributed index structures, and a Vector Approximation-file (DVA-file) in parallel. Keywords: Distributed Indexing Structure, High Dimensionality, KNN- Search I. Introduction The need to manage various types of large scale data stored in web environments has drastically increased and resulted in the development of index mechanism for high dimensional feature vector data about such a kinds of multimedia data. Recent search engine for the multimedia data in web location may collect billions of images, text and video data, which makes the performance bottleneck to get a suitable web documents and contents. Given large image and video data collections, a basic problem is to find objects that cover given information need. -
Parallel and Nearest Neighbor Search for High-Dimensional Index Structure of Content- Based Data Using DVA-Tree R
International Journal of Scientific Research and Review ISSN NO: 2279-543X Parallel and Nearest Neighbor search for high-dimensional index structure of content- based data using DVA-tree R. ROSELINE1, Z.JOHN BERNARD2, V. SUGANTHI3 1’2Assistant Professor PG & Research Department of Computer Applications, St Joseph’s College Of Arts and Science, Cuddalore. 2 Research Scholar, PG & Research Department of Computer Science, St Joseph’s College Of Arts and Science, Cuddalore. Abstract We propose a parallel high-dimensional index structure for content-based information retrieval so as to cope with the linear decrease in retrieval performance. In addition, we devise data insertion, range query and k-NN query processing algorithms which are suitable for a cluster-based parallel architecture. Finally, we show that our parallel index structure achieves good retrieval performance in proportion to the number of servers in the cluster-based architecture and it outperforms a parallel version of the VA-File. To address the demanding search needs caused by large-scale image collections, speeding up the search by using distributed index structures, and a Vector Approximation-file (DVA-file) in parallel Keywords: KNN- search, distributed indexing structure, high Dimensionality 1. Introduction The need to manage various types of large scale data stored in web environments has drastically increased and resulted in the development of index mechanism for high dimensional feature vector data about such a kinds of multimedia data. Recent search engine for the multimedia data in web location may collect billions of images, text and video data, which makes the performance bottleneck to get a suitable web documents and contents. -
Top Tree Compression of Tries∗
Top Tree Compression of Tries∗ Philip Bille Pawe lGawrychowski Inge Li Gørtz [email protected] [email protected] [email protected] Gad M. Landau Oren Weimann [email protected] [email protected] Abstract We present a compressed representation of tries based on top tree compression [ICALP 2013] that works on a standard, comparison-based, pointer machine model of computation and supports efficient prefix search queries. Namely, we show how to preprocess a set of strings of total length n over an alphabet of size σ into a compressed data structure of worst-case optimal size O(n= logσ n) that given a pattern string P of length m determines if P is a prefix of one of the strings in time O(min(m log σ; m + log n)). We show that this query time is in fact optimal regardless of the size of the data structure. Existing solutions either use Ω(n) space or rely on word RAM techniques, such as tabulation, hashing, address arithmetic, or word-level parallelism, and hence do not work on a pointer machine. Our result is the first solution on a pointer machine that achieves worst-case o(n) space. Along the way, we develop several interesting data structures that work on a pointer machine and are of independent interest. These include an optimal data structures for random access to a grammar- compressed string and an optimal data structure for a variant of the level ancestor problem. 1 Introduction A string dictionary compactly represents a set of strings S = S1;:::;Sk to support efficient prefix queries, that is, given a pattern string P determine if P is a prefix of some string in S. -
Space-Efficient Data Structures, Streams, and Algorithms
Andrej Brodnik Alejandro López-Ortiz Venkatesh Raman Alfredo Viola (Eds.) Festschrift Space-Efficient Data Structures, Streams, LNCS 8066 and Algorithms Papers in Honor of J. Ian Munro on the Occasion of His 66th Birthday 123 Lecture Notes in Computer Science 8066 Commenced Publication in 1973 Founding and Former Series Editors: Gerhard Goos, Juris Hartmanis, and Jan van Leeuwen Editorial Board David Hutchison Lancaster University, UK Takeo Kanade Carnegie Mellon University, Pittsburgh, PA, USA Josef Kittler University of Surrey, Guildford, UK Jon M. Kleinberg Cornell University, Ithaca, NY, USA Alfred Kobsa University of California, Irvine, CA, USA Friedemann Mattern ETH Zurich, Switzerland John C. Mitchell Stanford University, CA, USA Moni Naor Weizmann Institute of Science, Rehovot, Israel Oscar Nierstrasz University of Bern, Switzerland C. Pandu Rangan Indian Institute of Technology, Madras, India Bernhard Steffen TU Dortmund University, Germany Madhu Sudan Microsoft Research, Cambridge, MA, USA Demetri Terzopoulos University of California, Los Angeles, CA, USA Doug Tygar University of California, Berkeley, CA, USA Gerhard Weikum Max Planck Institute for Informatics, Saarbruecken, Germany Andrej Brodnik Alejandro López-Ortiz Venkatesh Raman Alfredo Viola (Eds.) Space-Efficient Data Structures, Streams, and Algorithms Papers in Honor of J. Ian Munro on the Occasion of His 66th Birthday 13 Volume Editors Andrej Brodnik University of Ljubljana, Faculty of Computer and Information Science Ljubljana, Slovenia and University of Primorska, -
A Complete Bibliography of Publications in Nordisk Tidskrift for Informationsbehandling, BIT, and BIT Numerical Mathematics
A Complete Bibliography of Publications in Nordisk Tidskrift for Informationsbehandling, BIT,andBIT Numerical Mathematics Nelson H. F. Beebe University of Utah Department of Mathematics, 110 LCB 155 S 1400 E RM 233 Salt Lake City, UT 84112-0090 USA Tel: +1 801 581 5254 FAX: +1 801 581 4148 E-mail: [email protected], [email protected], [email protected] (Internet) WWW URL: http://www.math.utah.edu/~beebe/ 09 June 2021 Version 3.54 Title word cross-reference [3105, 328, 469, 655, 896, 524, 873, 455, 779, 946, 2944, 297, 1752, 670, 2582, 1409, 1987, 915, 808, 761, 916, 2071, 2198, 1449, 780, 959, 1105, 1021, 497, 2589]. A(α) #24873 [1089]. [896, 2594, 333]. A∗ [2013]. A∗Ax = b [2369]. n A [1640, 566, 947, 1580, 1460]. A = a2 +1 − 0 n (3) [2450]. (A λB) [1414]. 0=1 [1242]. 1 [334]. α [824, 1580]. AN [1622]. A(#) [3439]. − 12 [3037, 2711]. 1 2 [1097]. 1:0 [3043]. 10 AX − XB = C [2195, 2006]. [838]. 11 [1311]. 2 AXD − BXC = E [1101]. B [2144, 1953, 2291, 2162, 3047, 886, 2551, 957, [2187, 1575, 1267, 1409, 1489, 1991, 1191, 2007, 2552, 1832, 949, 3024, 3219, 2194]. 2; 3 979, 1819, 1597, 1823, 1773]. β [824]. BN n − p − − [1490]. 2 1 [320]. 2 1 [100]. 2m 4 [1181]. BS [1773]. BSI [1446]. C0 [2906]. C1 [1105]. 3 [2119, 1953, 2531, 1351, 2551, 1292, [3202]. C2 [3108, 2422, 3000, 2036]. χ2 1793, 949, 1356, 2711, 2227, 570]. [30, 31]. Cln(θ); (n ≥ 2) [2929]. cos [228]. D 3; 000; 000; 000 [575, 637]. -
List of Transparencies
List of Transparencies Chapter 1 Primitive Java 1 A simple first program 2 The eight primitve types in Java 3 Program that illustrates operators 4 Result of logical operators 5 Examples of conditional and looping constructs 6 Layout of a switch statement 7 Illustration of method declaration and calls 8 Chapter 2 References 9 An illustration of a reference: The Point object stored at memory location 1000 is refer- enced by both point1 and point3. The Point object stored at memory location 1024 is referenced by point2. The memory locations where the variables are stored are arbitrary 10 The result of point3=point2: point3 now references the same object as point2 11 Simple demonstration of arrays 12 Array expansion: (a) starting point: a references 10 integers; (b) after step 1: original references the 10 integers; (c) after steps 2 and 3: a references 12 integers, the first 10 of which are copied from original; (d) after original exits scope, the orig- inal array is unreferenced and can be reclaimed 13 Common standard run-time exceptions 14 Common standard checked exceptions 15 Simple program to illustrate exceptions 16 Illustration of the throws clause 17 Program that demonstrates the string tokenizer 18 Program to list contents of a file 19 Chapter 3 Objects and Classes 20 Copyright 1998 by Addison-Wesley Publishing Company ii A complete declaration of an IntCell class 21 IntCell members: read and write are accessible, but storedValue is hidden 22 A simple test routine to show how IntCell objects are accessed 23 IntCell declaration with -
Funnel Heap - a Cache Oblivious Priority Queue
Alcom-FT Technical Report Series ALCOMFT-TR-02-136 Funnel Heap - A Cache Oblivious Priority Queue Gerth Stølting Brodal∗,† Rolf Fagerberg∗ Abstract The cache oblivious model of computation is a two-level memory model with the assumption that the parameters of the model are un- known to the algorithms. A consequence of this assumption is that an algorithm efficient in the cache oblivious model is automatically effi- cient in a multi-level memory model. Arge et al. recently presented the first optimal cache oblivious priority queue, and demonstrated the im- portance of this result by providing the first cache oblivious algorithms for graph problems. Their structure uses cache oblivious sorting and selection as subroutines. In this paper, we devise an alternative opti- mal cache oblivious priority queue based only on binary merging. We also show that our structure can be made adaptive to different usage profiles. Keywords: Cache oblivious algorithms, priority queues, memory hierar- chies, merging ∗BRICS (Basic Research in Computer Science, www.brics.dk, funded by the Danish National Research Foundation), Department of Computer Science, University of Aarhus, Ny Munkegade, DK-8000 Arhus˚ C, Denmark. E-mail: {gerth,rolf}@brics.dk. Partially supported by the Future and Emerging Technologies programme of the EU under contract number IST-1999-14186 (ALCOM-FT). †Supported by the Carlsberg Foundation (contract number ANS-0257/20). 1 1 Introduction External memory models are formal models for analyzing the impact of the memory access patterns of algorithms in the presence of several levels of memory and caches on modern computer architectures. The cache oblivious model, recently introduced by Frigo et al. -
Design and Analysis of Data Structures for Dynamic Trees
Design and Analysis of Data Structures for Dynamic Trees Renato Werneck Advisor: Robert Tarjan Outline The Dynamic Trees problem ) Existing data structures • A new worst-case data structure • A new amortized data structure • Experimental results • Final remarks • The Dynamic Trees Problem Dynamic trees: • { Goal: maintain an n-vertex forest that changes over time. link(v; w): adds edge between v and w. ∗ cut(v; w): deletes edge (v; w). ∗ { Application-specific data associated with vertices/edges: updates/queries can happen in bulk (entire paths or trees at once). ∗ Concrete examples: • { Find minimum-weight edge on the path between v and w. { Add a value to every edge on the path between v and w. { Find total weight of all vertices in a tree. Goal: O(log n) time per operation. • Applications Subroutine of network flow algorithms • { maximum flow { minimum cost flow Subroutine of dynamic graph algorithms • { dynamic biconnected components { dynamic minimum spanning trees { dynamic minimum cut Subroutine of standard graph algorithms • { multiple-source shortest paths in planar graphs { online minimum spanning trees • · · · Application: Online Minimum Spanning Trees Problem: • { Graph on n vertices, with new edges \arriving" one at a time. { Goal: maintain the minimum spanning forest (MSF) of G. Algorithm: • { Edge e = (v; w) with length `(e) arrives: 1. If v and w in different components: insert e; 2. Otherwise, find longest edge f on the path v w: · · · `(e) < `(f): remove f and insert e. ∗ `(e) `(f): discard e. ∗ ≥ Example: Online Minimum Spanning Trees Current minimum spanning forest. • Example: Online Minimum Spanning Trees Edge between different components arrives. • Example: Online Minimum Spanning Trees Edge between different components arrives: • { add it to the forest. -
Fundamental Data Structures Contents
Fundamental Data Structures Contents 1 Introduction 1 1.1 Abstract data type ........................................... 1 1.1.1 Examples ........................................... 1 1.1.2 Introduction .......................................... 2 1.1.3 Defining an abstract data type ................................. 2 1.1.4 Advantages of abstract data typing .............................. 4 1.1.5 Typical operations ...................................... 4 1.1.6 Examples ........................................... 5 1.1.7 Implementation ........................................ 5 1.1.8 See also ............................................ 6 1.1.9 Notes ............................................. 6 1.1.10 References .......................................... 6 1.1.11 Further ............................................ 7 1.1.12 External links ......................................... 7 1.2 Data structure ............................................. 7 1.2.1 Overview ........................................... 7 1.2.2 Examples ........................................... 7 1.2.3 Language support ....................................... 8 1.2.4 See also ............................................ 8 1.2.5 References .......................................... 8 1.2.6 Further reading ........................................ 8 1.2.7 External links ......................................... 9 1.3 Analysis of algorithms ......................................... 9 1.3.1 Cost models ......................................... 9 1.3.2 Run-time analysis -
*Dictionary Data Structures 3
CHAPTER *Dictionary Data Structures 3 The exploration efficiency of algorithms like A* is often measured with respect to the number of expanded/generated problem graph nodes, but the actual runtimes depend crucially on how the Open and Closed lists are implemented. In this chapter we look closer at efficient data structures to represent these sets. For the Open list, different options for implementing a priority queue data structure are consid- ered. We distinguish between integer and general edge costs, and introduce bucket and advanced heap implementations. For efficient duplicate detection and removal we also look at hash dictionaries. We devise a variety of hash functions that can be computed efficiently and that minimize the number of collisions by approximating uniformly distributed addresses, even if the set of chosen keys is not (which is almost always the case). Next we explore memory-saving dictionaries, the space requirements of which come close to the information-theoretic lower bound and provide a treatment of approximate dictionaries. Subset dictionaries address the problem of finding partial state vectors in a set. Searching the set is referred to as the Subset Query or the Containment Query problem. The two problems are equivalent to the Partial Match retrieval problem for retrieving a partially specified input query word from a file of k-letter words with k being fixed. A simple example is the search for a word in a crossword puzzle. In a state space search, subset dictionaries are important to store partial state vectors like dead-end patterns in Sokoban that generalize pruning rules (see Ch.