The Functional Roles of Herbivores in the Rocky Intertidal Systems in Chile
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Amphibious Fishes: Terrestrial Locomotion, Performance, Orientation, and Behaviors from an Applied Perspective by Noah R
AMPHIBIOUS FISHES: TERRESTRIAL LOCOMOTION, PERFORMANCE, ORIENTATION, AND BEHAVIORS FROM AN APPLIED PERSPECTIVE BY NOAH R. BRESSMAN A Dissertation Submitted to the Graduate Faculty of WAKE FOREST UNIVESITY GRADUATE SCHOOL OF ARTS AND SCIENCES in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY Biology May 2020 Winston-Salem, North Carolina Approved By: Miriam A. Ashley-Ross, Ph.D., Advisor Alice C. Gibb, Ph.D., Chair T. Michael Anderson, Ph.D. Bill Conner, Ph.D. Glen Mars, Ph.D. ACKNOWLEDGEMENTS I would like to thank my adviser Dr. Miriam Ashley-Ross for mentoring me and providing all of her support throughout my doctoral program. I would also like to thank the rest of my committee – Drs. T. Michael Anderson, Glen Marrs, Alice Gibb, and Bill Conner – for teaching me new skills and supporting me along the way. My dissertation research would not have been possible without the help of my collaborators, Drs. Jeff Hill, Joe Love, and Ben Perlman. Additionally, I am very appreciative of the many undergraduate and high school students who helped me collect and analyze data – Mark Simms, Tyler King, Caroline Horne, John Crumpler, John S. Gallen, Emily Lovern, Samir Lalani, Rob Sheppard, Cal Morrison, Imoh Udoh, Harrison McCamy, Laura Miron, and Amaya Pitts. I would like to thank my fellow graduate student labmates – Francesca Giammona, Dan O’Donnell, MC Regan, and Christine Vega – for their support and helping me flesh out ideas. I am appreciative of Dr. Ryan Earley, Dr. Bruce Turner, Allison Durland Donahou, Mary Groves, Tim Groves, Maryland Department of Natural Resources, UF Tropical Aquaculture Lab for providing fish, animal care, and lab space throughout my doctoral research. -
MORPHOMETRIC and PARASITOLOGICAL EVIDENCE for ONTOGENETIC and GEOGRAPHICAL DIETARY SHIFTS in INTERTIDAL FISHES Marcela Aldana, J
BULLETIN OF MARINE SCIENCE, 70(I): 55-74, 2002 MORPHOMETRIC AND PARASITOLOGICAL EVIDENCE FOR ONTOGENETIC AND GEOGRAPHICAL DIETARY SHIFTS IN INTERTIDAL FISHES Marcela Aldana, Jose M. Pulgar, Fernando Ogalde and F PatricioOjeda ABSTRACT Studies on the feeding ecology of intertidal fish assemblages have indicated the exist- ence of three trophic groups: herbivores, omnivores and carnivores. This classification has enabled researchers to establish some ecological relationships among their compo- nents. However, temporal and spatial variations in the use of food resources have rarely been addressed. In this study, ontogenetic and geographical variations in the diet of two intertidal fish species: Girella laevifrons and Graus nigra were evaluated through an integrative analysis of their diet, relation between intestinal length/body length, and their parasite fauna. Results of this combined analysis suggest ontogenetic and geographical variations in the diet of G. laevifrons. In G. nigra, no evidence of ontogenetic dietary shifts was found, but marked differences in diet were detected among localities. How- ever, parasitological evidence does not reflect the geographical differences in its diet. Omnivory of G. nigra at two localities (viz Caleta Errazuriz and El Tabo) may be indica- :ive of the opportunistic nature of this species related to the greater availability of nacroalgae at these localities. The assessment of intestinal length of G. nigra highlights the importance of considering macroalgal species composition, and not only their abun- dance as a group, when estimating the quality of the diet of a given fish species. In general, the geographical differences in diet, length of the intestine and parasitofauna of G. laevifrons and G. -
06-Hist.Nat. 77/2-Espoz
PATELOGASTRÓPODOS INTERMAREALES DE CHILERevista Y PERÚ Chilena de Historia Natural257 77: 257-283, 2004 Los patelogastrópodos intermareales de Chile y Perú Intertidal limpets of Chile and Perú CARMEN ESPOZ1,3, DAVID R. LINDBERG2, JUAN C. CASTILLA1 & W. BRIAN SIMISON2 1Departamento de Ecología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile 2Museum of Paleontology, University of California, Berkeley, California, USA 3Dirección actual: Departamento de Ciencias Básicas, Universidad Santo Tomás, Ejército 146, Santiago, Chile; e-mail: [email protected] RESUMEN En este estudio se entrega un sistema de clasificación que refleja las relaciones de parentesco, inferidas a partir del análisis de la región 16S de ADN mitocondrial, de los patelogastrópodos que habitan en la zona intermareal a lo largo de la costa rocosa de Chile y Perú. Además, se incluye el análisis comparativo de estos patelogastrópodos en relación con la estructura, la morfología y los patrones de color de la concha, los dientes de la rádula y la anatomía corporal. Adicionalmente, se entrega información respecto de la distribución y ecología para todos los miembros de este grupo. Los resultados muestran que la fauna Lottiidae de Chile y Perú consiste en al menos nueve especies de patelogastrópodos intermareales. Esto es, ocho especies de patelogastrópodos agrupadas dentro del clado monofilético Scurria (S. variabilis, S. zebrina, S. viridula, S. plana, S. scurra, S. araucana, S. ceciliana y una especie no determinada) y un “taxón problemático” asignado preliminarmente dentro del género Lottia (‘Lottia’ orbignyi). El grupo está presente entre los 5º S y 54º S, registrándose en los niveles intermareales superior, medio e inferior, desde zonas expuestas a protegidas del oleaje. -
CAMUS PATRICIO.Pmd
Revista de Biología Marina y Oceanografía Vol. 48, Nº3: 431-450, diciembre 2013 DOI 10.4067/S0718-19572013000300003 Article A trophic characterization of intertidal consumers on Chilean rocky shores Una caracterización trófica de los consumidores intermareales en costas rocosas de Chile Patricio A. Camus1, Paulina A. Arancibia1,2 and M. Isidora Ávila-Thieme1,2 1Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Casilla 297, Concepción, Chile. [email protected] 2Programa de Magister en Ecología Marina, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Casilla 297, Concepción, Chile Resumen.- En los últimos 50 años, el rol trófico de los consumidores se convirtió en un tópico importante en la ecología de costas rocosas de Chile, centrándose en especies de equinodermos, crustáceos y moluscos tipificadas como herbívoros y carnívoros principales del sistema intermareal. Sin embargo, la dieta y comportamiento de muchos consumidores aún no son bien conocidos, dificultando abordar problemas clave relativos por ejemplo a la importancia de la omnivoría, competencia intra-e inter-específica o especialización individual. Intentando corregir algunas deficiencias, ofrecemos a los investigadores un registro dietario exhaustivo y descriptores ecológicos relevantes para 30 especies de amplia distribución en el Pacífico sudeste, integrando muestreos estacionales entre 2004 y 2007 en 4 localidades distribuidas en 1.000 km de costa en el norte de Chile. Basados en el trabajo de terreno y laboratorio, -
Feeding Selectivity of the Herbivorous Fish Scartichthys Viridis:Effects on Macroalgal Community Structure in a Temperatea Rocky Intertidal Coastal Zone
MARINE ECOLOGY PROGRESS SERIES Vol. 184: 219-229,1999 Published July 28 Mar Ecol Prog Ser I I Feeding selectivity of the herbivorous fish Scartichthys viridis: effects on macroalgal community structure in a temperatea rocky intertidal coastal zone F. Patricio Ojeda*, Alejandro A. Munoz** Departamento de Ecologia, Facultad de Ciencias Biologicas, P. Universidad Catolica de Chile, Casilla 114-D. Santiago. Chile ABSTRACT: The ecological importance of fish herbivory was examined in a temperate rocky intertidal zone along the central Chilean coast. In this system, the blenny Scartichtl~ysviridjs is the most abun- dant and only herbivorous fish. We describe its diet, determine its field food selectivity (gut contents vs macroalgal field availabihty comparison), and report on ~tslaboratory dietary preferences in a multiple- choice feeding experiment. Finally, we evaluate the relative effects of fish herbivory and grazing inver- tebrates on macroalgal abundance, distribution and diversity patterns in the field, using replicated exclusion cages to manipulate grazing intensity. S. viridis was found to be a selective grazer; its diet was dominated by 2 macroalgae: the green Ulva and the red Gelidium, representing 32.6 and 41.4 % of its total gut content biomass, respectively. Ulva was consumed much above its field availability while Gelidium was selected only during fall-winter. In the laboratory, S. viridis selected the green macroal- gae Ulva rigida and Codium dimorphum and avoided Gelidium chilense. We suggest that Gelidium may be included in its diet due to the limited availability of Ulva in the field. Experimental exclusion of this fish from rocky surfaces resulted in increased abundance of green foliose macroalgae (U. -
Seaweeds Preferred by Herbivorous Fishes
J Appl Phycol DOI 10.1007/s10811-007-9290-4 Seaweeds preferred by herbivorous fishes G. Tolentino-Pablico & N. Bailly & R. Froese & C. Elloran Received: 21 April 2007 /Revised and Accepted: 5 November 2007 # Springer Science + Business Media B.V. 2007 Abstract Marine macrobenthic algae (or seaweeds), epi- (http://www.incofish.org/herbitool.php). The tool is intended phytic microalgae, and other aquatic plants constitute the to assist aquaculturists, conservationists and ecosystem- main food items of marine herbivorous fishes. About 5% of based fisheries managers. all fish species are herbivorous; only 30% of these are marine, most of them living in coral reefs. An analysis was Keywords Aquaculture . Diet composition . FishBase . performed on all the seaweeds that formed part of the natural Food items . Herbivores tool diet of these fishes, based on information contained in FishBase (http://www.fishbase.org). The results showed that many coral-reef-associated marine herbivorous fishes, such Introduction as the families Blennidae, Kyphosidae and Siganidae, fed selectively on filamentous and turf fleshy seaweeds, which Filamentous and turf seaweeds, Bacillariophyta, Dinophyceae, they prefer over calcareous coralline and encrusting species. Cyanobacteria, associated meiofauna and detritus are food In particular, Chlorophyceae of the genera Cladophora, resources for grazing herbivorous fishes (Ojeda and Muñoz Enteromorpha and Ulva were preferred by Scartichthys 1999;Crossmanetal.2001; Choat et al. 2002)andforma viridis (Blennidae), Girella spp. (Kyphosidae), Sarpa salpa complex assemblage called the epilithic algal matrix (EAM) (Sparidae), and Phaeophyceae in the genera Sargassum and (Wilson et al. 2003). The bulk of the diet consists mainly of Dictyota were preferred by Kyphosus spp. -
Zoological Endeavors Inspired by A. Richard Palmer: Introduction, Biography, and Bibliography
Canadian Journal of Zoology Zoological Endeavors Inspired by A. Richard Palmer: Introduction, Biography, and Bibliography Journal: Canadian Journal of Zoology Manuscript ID cjz-2020-0274 Manuscript Type: Editorial Date Submitted by the 17-Nov-2020 Author: Complete List of Authors: Miyashita, Tetsuto; Canadian Museum of Nature Jamniczky, Heather; University of Calgary, Cell Biology & Anatomy Standen, Emily; University of Ottawa, Department of Biology Is your manuscript invited for Draft consideration in a Special Zoological Endeavors Inspired by A. Richard Palmer Issue?: evolutionary biology, bilateral asymmetry, phenotypic plasticity, marine Keyword: ecology, career in biology, Pacific Northwest © The Author(s) or their Institution(s) Page 1 of 54 Canadian Journal of Zoology 1 Zoological Endeavors Inspired by A. Richard Palmer: Introduction, Biography, and 2 Bibliography1 3 4 Tetsuto Miyashita2, Heather A. Jamniczky3, and Emily M. Standen4 5 6 1This editorial introduces a series of invited papers arising from the symposium “Zoological 7 Endeavours Inspired by A. Richard Palmer” that was co-sponsored by the Canadian Society of 8 Zoologists and the Canadian Journal of Zoology and held during the Annual Meeting of the Canadian 9 Society of Zoologists at the University of Windsor, Windsor, Ontario, 14–16 May 2019. 10 11 2Canadian Museum of Nature, P.O. Box 3443,Draft Station D, Ottawa, ON K1P 6P4, Canada 12 3Department of Cell Biology and Anatomy, Cumming School of Medicine, the University of Calgary, 13 Calgary, AB T2X 4N1, Canada 14 4Department of Biology, the University of Ottawa, Ottawa, ON K1N 6N5, Canada 15 © The Author(s) or their Institution(s) Canadian Journal of Zoology Page 2 of 54 2 16 17 A professorial cowboy-aesthete – the combination seems incongruous yet he was utterly of a 18 piece – taught me how to think about evolution, which is to say about almost everything. -
KING-THESIS-2017.Pdf (2.949Mb)
MOLECULAR PHYLOGENETIC INVESTIGATION OF THE CLINGFISHES (TELEOSTEI: GOBIESOCIDAE) A Thesis by CRAGEN DANIELLE KING Submitted to the Office of Graduate and Professional Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Chair of Committee, Kevin W. Conway Committee Members, Gary Voelker David Portnoy Interdisciplinary Faculty Chair, Duncan MacKenzie December 2017 Major Subject: Marine Biology Copyright 2017 Cragen Danielle King ABSTRACT Currently, there are roughly 170 species of clingfishes (family Gobiesocidae) divided between ten subfamilies in a “phenetic” classification scheme proposed over 60 years ago. Recently, an alternative classification scheme was proposed which included only two subfamilies. For this study, a large scale multi-locus investigation on the phylogenetic relationships of the Gobiesocidae was conducted using both mitochondrial and nuclear DNA sequence data to assess whether the two available classification schemes reflect the evolutionary relationships of the group. Phylogenetic hypotheses are obtained from Bayesian and Maximum Likelihood analyses of two mitochondrial (12S and COI; 1062 bp) and five nuclear genes (ENC1, GLYT, MYH6, SH3PX3, and ZIC1; 3785 bp) for 81 species of clingfishes. Four of the ten subfamilies (Aspasminae, Diademichthyinae, Diplocrepinae, and Gobiesocinae) and four genera (Aspasmichthys, Cochleoceps, Lepadichthys, and Lepadogaster) are obtained as not monophyletic. The resulting topologies also do not recover the two-subfamily classification scheme as useful for classifying clingfishes because subfamily Cheilobranchinae is obtained as a monophyletic group that is deeply embedded inside the second subfamily Gobiesocinae. The two available classification schemes and their included subfamilies are discussed in detail. ii DEDICATION I dedicate this thesis to my grandparents, parents, siblings, and to the Smiths for all of their love and support. -
Downloaded the Network and Metadata Provided in [41] and Compared the Clusters Found with Those Obtained
bioRxiv preprint doi: https://doi.org/10.1101/656504; this version posted December 24, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. functionInk: An ecient method to detect functional groups in multidimensional networks reveals the hidden structure of ecological communities December 24, 2019 Short Title Community detection in multidimensional ecological networks Alberto Pascual-García1, 2,* and Thomas Bell1 (1) Department of Life Sciences. Silwood Park Campus. Imperial College London, Ascot, United Kingdom (2) Current address: Institute of Integrative Biology. ETH-Zürich, Zürich, Switzerland (*) Correspondence: [email protected]. Abstract 1. Complex networks have been useful to link experimental data with mechanistic models, and have become widely used across many scientic disciplines. Recently, the increasing amount and complexity of data, particularly in biology, has prompted the development of multidimensional networks, where dimensions reect the multiple qualitative properties of nodes, links, or both. As a consequence, traditional quantities computed in single dimensional networks should be adapted to incorporate this new information. A particularly important problem is the detection of communities, namely sets of nodes sharing certain properties, which reduces the complexity of the networks, hence facilitating its interpretation. 2. In this work, we propose an operative denition of function for the nodes in multidimensional networks, and we exploit this denition to show that it is possible to detect two types of communities: i) modules, which are communities more densely connected within their members than with nodes belonging to other communities, and ii) guilds, which are sets of nodes connected with the same neighbours, even if they are not connected themselves. -
Redalyc.Geographic Variation in Diversity of Wave Exposed Rocky
Revista Chilena de Historia Natural ISSN: 0716-078X [email protected] Sociedad de Biología de Chile Chile R. BROITMAN, BERNARDO; VÉLIZ, FREDY; MANZUR, TATIANA; WIETERS, EVIE A.; RANDALL FINKE, G.; FORNES, PAULINA A.; VALDIVIA, NELSON; NAVARRETE, SERGIO A. Geographic variation in diversity of wave exposed rocky intertidal communities along central Chile Revista Chilena de Historia Natural, vol. 84, núm. 1, 2011, pp. 143-154 Sociedad de Biología de Chile Santiago, Chile Available in: http://www.redalyc.org/articulo.oa?id=369944297011 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative INTERTIDAL BIODIVERSITY IN CENTRAL CHILE 143 REVISTA CHILENA DE HISTORIA NATURAL Revista Chilena de Historia Natural 84: 143-154, 2011 © Sociedad de Biología de Chile RESEARCH ARTICLE Geographic variation in diversity of wave exposed rocky intertidal communities along central Chile Variación geográfica de la biodiversidad en hábitats intermareales rocosos de Chile central BERNARDO R. BROITMAN1, 2, *, FREDY VÉLIZ2, TATIANA MANZUR2, EVIE A. WIETERS2, G. RANDALL FINKE2, PAULINA A. FORNES1, NELSON VALDIVIA1 & SERGIO A. NAVARRETE2 1 Centro de Estudios Avanzados en Zonas Áridas, Facultad de Ciencias del Mar, Universidad Católica del Norte, Larrondo 1281, Coquimbo, Chile 2 Estación Costera de Investigaciones Marinas & Center for Advanced Studies in Ecology and Biodiversity, Pontificia Universidad Católica de Chile, Casilla 114-D, Santiago, Chile *Corresponding author: [email protected] ABSTRACT Along the coast of central Chile, geographic trends of diversity have been inferred from literature compilations and museum collections based on species range limits for some taxonomic groups. -
Functionink: an Efficient Method to Detect Functional Groups
bioRxiv preprint doi: https://doi.org/10.1101/656504; this version posted October 28, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. functionInk: An ecient method to detect functional groups in multidimensional networks reveals the hidden structure of ecological communities October 28, 2019 Short Title Community detection in multidimensional ecological networks Alberto Pascual-García1, 2,* and Thomas Bell1 (1) Department of Life Sciences. Silwood Park Campus. Imperial College London, Ascot, United Kingdom (2) Current address: Institute of Integrative Biology. ETH-Zürich, Zürich, Switzerland (*) Correspondence: [email protected]. Abstract 1. Complex networks have been useful to link experimental data with mechanistic models, and have become widely used across many scientic disciplines. Recently, the increasing amount and complexity of data, particularly in biology, has prompted the development of multidimensional networks, where dimensions reect the multiple qualitative properties of nodes, links, or both. As a consequence, traditional quantities computed in single dimensional networks should be adapted to incorporate this new information. A particularly important problem is the detection of communities, namely sets of nodes sharing certain properties, which reduces the complexity of the networks, hence facilitating its interpretation. 2. In this work, we propose an operative denition of function for the nodes in multidimensional networks, and we exploit this denition to show that it is possible to detect two types of communities: i) modules, which are communities more densely connected within their members than with nodes belonging to other communities, and ii) guilds, which are sets of nodes connected with the same neighbours, even if they are not connected themselves. -
Ecology of Patella Species in Britain Orostica Vega, Mauricio
Bangor University DOCTOR OF PHILOSOPHY Living at the edge: Ecology of Patella species in Britain Orostica Vega, Mauricio Award date: 2018 Awarding institution: Bangor University Link to publication General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal ? Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Download date: 08. Oct. 2021 Living at the edge: Ecology of Patella species in Britain Mauricio H. Oróstica Vega School Ocean Sciences, Bangor University, Menai Bridge, Anglesey, UK, LL59 5AB Submitted in accordance with the requirements for the degree of Doctor of Philosophy November 2018 SUMMARY Climatic fluctuations over the last 120 years have been well described in northern Europe, showing alternation of colder (1910s to 1920s, 1960s to 1980s) and warmer (1930s to 1950s) periods upon which recent anthropogenic warming has been superimposed. Biological manifestation of such changes in climate may be determined by examination of shifts in species distribution and performance traits.