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Sommerfeltia : Is Owned and Edited by the Botanical Garden And
I' ' '\ - ~ t sommerfeltia : is owned and edited by the Botanical Garden and . uscum, University of Oslo. SOMMERFELTIA is named in honour of the eminent Norwegian botamst and clergyman S0ren Ch 1st1an Sommerfelt (1794-1838). The generic name Sommerfe/tia has been useo m (1) the lichens by Florke 1827, now Solorina, (2) Fabaceae by Schumactler 1827, now Drepanm:arpus, and (3) Asteraceae by Lessing 1832, nom co ~- SOMMERFEL11A 1~ a stnt s of mo 10p:raphs in plant taxonomy. phytogeo graphy, phytosociology, plant el:olo 1. plant morphology, and evolutionary botany. Most paper~ are b_ ~01wcg1an authors. Authors not on the staff of the Botanical Garden and Museum in )slo pay a page charge of NOK 30.00. SOMMERFELTIA appear~ at im.:gular llltervals, non 1ally one article per volume. SOMMFRFE .,TIA SL P > .L v1 , ·. , suppl ~rnt,rh to SO\IIMERFELTIA. intended for publicauon nc,t mud d~l r> he l rigma rnOill.lg aphs. Authors, associated with the Botaa,rn lra { , id ~ useL 1 in O~lo, are responsible for their own co llributio 1 Technical editor: Rune ~ .. vorst. ~1k ar1 1 Addrcs~: SOMMERrELTIA. l old al 'ardc a10 Museum Lnivers'ty of o~Io Tr'lf1 h 1 I \tl'.ltil =~ B (h , .., O'ilo 5, r,.;or\\-ay Orckr: On ;:i standu ~ or 1 ' , v. u n t. •i t!l lt lf each volumt·) SOM\1ER- H I ·1 I i~ l Pl r cd at \(1 % dis oun Suhscriht!r~ to so~ MI:R ·1 l Tl ar )ff· d S0\1\1 ~RL~LnA Sl,l PLEME~T at O % d1 ..., 1 r , t>arate \tolurr l! a ~ ~upplied at the price~ m ii ' tt· I n Vl . -
Umbilicariaceae Phylogeny TAXON 66 (6) • December 2017: 1282–1303
Davydov & al. • Umbilicariaceae phylogeny TAXON 66 (6) • December 2017: 1282–1303 Umbilicariaceae (lichenized Ascomycota) – Trait evolution and a new generic concept Evgeny A. Davydov,1 Derek Peršoh2 & Gerhard Rambold3 1 Altai State University, Lenin Ave. 61, Barnaul, 656049 Russia 2 Ruhr-Universität Bochum, AG Geobotanik, Gebäude ND 03/170, Universitätsstraße 150, 44801 Bochum, Germany 3 University of Bayreuth, Plant Systematics, Mycology Dept., Universitätsstraße 30, NW I, 95445 Bayreuth, Germany Author for correspondence: Evgeny A. Davydov, [email protected] ORCID EAD, http://orcid.org/0000-0002-2316-8506; DP, http://orcid.org/0000-0001-5561-0189 DOI https://doi.org/10.12705/666.2 Abstract To reconstruct hypotheses on the evolution of Umbilicariaceae, 644 sequences from three independent DNA regions were used, 433 of which were newly produced. The study includes a representative fraction (presumably about 80%) of the known species diversity of the Umbilicariaceae s.str. and is based on the phylograms obtained using maximum likelihood and a Bayesian phylogenetic inference framework. The analyses resulted in the recognition of eight well-supported clades, delimited by a combination of morphological and chemical features. None of the previous classifications within Umbilicariaceae s.str. were supported by the phylogenetic analyses. The distribution of the diagnostic morphological and chemical traits against the molecular phylogenetic topology revealed the following patterns of evolution: (1) Rhizinomorphs were gained at least four times independently and are lacking in most clades grouping in the proximity of Lasallia. (2) Asexual reproductive structures, i.e., thalloconidia and lichenized dispersal units, appear more or less mutually exclusive, being restricted to different clades. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
The Lichens 19
GALLOWAY: HUMBOLDT MOUNTAINS: THE LICHENS 19 V E GET A T ION S T U DIE SON TH E HUM B 0 L D T M 0 U N T A INS FIORDLAND PART 2: THE LICHENS D. J. GALLOWAY Biochemistry Department, University of Otago, Dunedin SUMMARY The commonest epiphytic foliose lichens in the beech forest are species of Sticta, some often A detailed list is given of the species of reaching great size: S. hirta, S. coronata, S. macrolichens collected from the western slopes of the Humboldt Mountains, Fiordland. The latifrons, S. filix. The most common epiphytic fruticose lichens are species of Usnea and composition and possible importance is dis- cussed of "sub-regional" lichen communities. Sphaerophorus. U snea xanthopoga and U. capiUacea are INTRODUCTION common on twigs of Nothofagus in well-lit situations either at the forest edge or at the The lichen flora of New Zealand is still top of the canopy. Sphaerophorus tener is a imperfectly known and details of its regional common epiphyte and other members of this composition are lacking for much of the genus represented in lesser numbers are several country. A survey of the rather scattered varieties of S. melanocarpus and occasionally literature reveals that very little taxonomic or S. stereocauloides. This, the largest species of ecological work has been done on the alpine the genus and the only one to have cephalodia, lichens. The great difficulty in field lichenology appears to be restricted to areas of high rainfall is accurate recognition of species, particularly in west and south-west areas of the South in alpine regions, where crustaceous lichens, Island. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
Australas. Lichenol. 46
Australasian Lichenology Number 46, January 2000 Australasian Lichenology Menegazzia dielsii (Hillmann) R. Sant. Number 46, January 2000 =w= -= -.- Menegazzia.. pertransita. (Stirton) R. Sant. Smm (hydrated) 5 mm ANNOUNCEMENTS AND NEWS 14th meeting of Australasian lichenologists, Melbourne, 2000 ......................... 2 5th International Flora Malesiana Symposiwn, Sydney, 2001 ......................... 2 Australian lichen checklist now on the Web ....................................................... 2 New book-Australian rainforest lichens ................................ .. ......................... 3 New calendar-Australasian cryptogams ........................................................... 3 RECENT LITERATURE ON AUSTRALASIAN LICHENS .................................. 4 ARTICLES Archer, AW-Platygrapha albovestita C. Knight, an additional synonym for Cyclographina platyleuca (Nyl.) D.D. Awasthi & M. Joshi ............................. 6 Galloway, DJ-Contributions to a history of New Zealand lichenology 3. The French ...................................... .......................................................................... 7 Elix, JA- A new species of Karoowia from Australia ...................................... 18 McCarthy, PM-Porina austropaci/ica (Trichotheliaceae), a new species from Norfolk Island .................................................................................................. 21 Elix, JA; Griffin, FK; Louwhoff, SHJJ-Norbaeomycesic acid, a new depside from the lichen Hypotrachyna oriental is ....................................................... -
Phytochemical Review of the Lichen Genus Stereocaulon (Fam
Phytochem Rev https://doi.org/10.1007/s11101-018-9576-y Phytochemical review of the lichen genus Stereocaulon (Fam. Stereocaulaceae) and related pharmacological activities highlighted by a focus on nine species Friardi Ismed . Franc¸oise Lohe´zic-Le De´ve´hat . Annie Guiller . Nina Corlay . Amri Bakhtiar . Joel Boustie Received: 16 January 2018 / Accepted: 11 May 2018 Ó Springer Science+Business Media B.V., part of Springer Nature 2018 Abstract The Stereocaulon genus is one of the isolated compounds have been compiled. Biological fruticose lichen groups distributed worldwide from activities as cytotoxic, anti-inflammatory, antibacte- tropical zones to polar zones. However, the scientific rial, antifungal or antioxidant are reported. study of this tricky genus is still limited, making it a challenge to study the group further. Detailed mor- Keywords Biogenetic Á Bioactivities Á Folk phological studies are essential to discriminate closely medicines Á Lichens Á Secondary metabolites Á shaped species which is illustrated through personal Stereocaulon data focused on phyllocladia, apothecia and spores of nine species. Secondary metabolites isolated from Stereocaulon species are mostly some depsides, depsidones, diphenylethers and dibenzofurans which Introduction can have a taxonomic value. The use of Stereocaulon lichens as a traditional medicine in several regions of Among the symbiotic organism called lichen formed the world and pharmacological studies of extracts and between two major different partners that are fungi (mycobiont) and/or algae/cyanobacteria as photobiont without excluding the lichen-associated microbiome, Electronic supplementary material The online version of one of an interesting genus is Stereocaulon. The genus this article (https://doi.org/10.1007/s11101-018-9576-y) con- tains supplementary material, which is available to authorized Stereocaulon Hoffm. -
Carbon Metabolism M Lichens
Symbiosis, 17 (1994) 127-182 127 Balaban, Philadelphia/Rehovot Review article Carbon Metabolism m Lichens DIANNE FAHSELT Department of Plant Sciences, University of Western Ontario, London, Ont., Canada N6A 5B1 Tel. 1-519-679-2111, ext. 6480, Fax 1-519-661-3935 r Received July 20, 1994; Accepted November 18, 1994 Abstract Metabolic pathways in lichens proceed, not only in different cellular compart• ments, but also in two closely associated symbiotic partners. Some of the same primary pathways must operate in both symbionts, but others probably func• tion in an analagous fashion in both the mycobiont and the phycobiont. Carbon that is fixed photosynthetically is transferred from the photobiont to the myco• biont where much of it is transformed into acyclic polyols. Appreciable carbon may be leached from the thallus, as well as deployed in cell walls or mucilagi• nous intercellular matrices, and in most species it is also used for synthesis of secondary metabolites. Regulatory controls and details of interactions between the mycobiont and its autotrophic associate are poorly understood, but carbon chemistry may be fundamental to maintenance of an equilibrium between the two symbiotic partners. Keywords: lichen, photosynthesis, respiration, storage, slow growth, alternate path• ways Contents 1. Introduction . 129 Distinguishing symbiotic partners . 130 Multiple enzyme forms . 133 2. Photosynthesis . 134 0334-5114/94 /$05.50 @1994 Balaban 128 D. FAHSELT Antennae . 137 Protection . 139 Photosynthetic electron transport . 140 Carbon fixation . 141 3. Photorespiration (The C-2 Pathway) . 144 4. Carbon Transfer to the Mycobiont . 145 5. Respiration/ Oxidation . 146 The Embden-Meyerhof pathway. 146 The pentose phosphate pathway . -
Symbiotic Cyanobacteria in Lichens
Symbiotic Cyanobacteria in Lichens Jouko Rikkinen Faculty of Biological and Environmental Sciences, Department of Biosciences, University of Helsinki, Viikinkaari 1, 65 Helsinki, Finland Abstract Cyanolichens are obligate symbioses between fungi and cyanobacteria. They occur in many types of environments ranging from Arctic tundra and semi-deserts to tropical rainforests. Possibly even a majority of their global species diversity has not yet been described. Symbiotic cyanobacteria provide both photosynthate and fixed nitrogen to the fungal host and the relative importance of these functions differs in different cyanolichens. The cyanobiont can either be the sole photosynthetic partner or a secondary symbiont in addition to a primary green algal photobiont. In addition, the cyanolichen thallus may incorporate a plethora of other microorganisms. The fungal symbionts in cyanolichens are almost exclusively ascomycetes. Nostoc is by far the most commonly encountered cyanobacterial genus. While the cyanobacterial symbionts are presently not readily identifiable to species, molecular methods work well on the generic level and offer practical means for identifying symbiotic cyanobacterial genotypes. The present diversity of lichen cyanobionts may partly reflect the evolutionary effects of their lichen-symbiotic way of life and dispersal. 1 1. Introduction Cyanobacteria are ancient monophyletic lineage of unicellular and multicellular prokaryotes that possess chlorophyll a and are capable of oxygenic photosynthesis. Prokaryotic fossils morphologi- cally resembling modern cyanobacteria have been found from Archean deposits and it is generally believed that cyanobacterial photosynthesis raised oxygen levels in the atmosphere around 2.5–2.3 billion years ago, hence establishing the basis for the evolution of aerobic respiration. Recent findings suggest that the non-photosynthetic ancestors of cyanobacteria were anaerobic, motile and obligately fermentative (Di Rienzi et al., 2014). -
Newsletter and Proceedings of the Linnean Society of London
NEWSLETTER AND PROCEEDINGS OF THE LINNEAN SOCIETY OF LONDON VOLUME 25 • NUMBER 3 • OCTOBER 2009 THE LINNEAN SOCIETY OF LONDON Registered Charity Number 220509 Burlington House, Piccadilly, London W1J 0BF Tel. (+44) (0)20 7434 4479; Fax: (+44) (0)20 7287 9364 e-mail: [email protected]; internet: www.linnean.org President Secretaries Council Dr Vaughan Southgate BOTANICAL The Officers and Dr Sandra D Knapp Prof Pieter Baas Vice-Presidents Prof Richard Bateman Dr Mike Fay ZOOLOGICAL Dr Andy Brown Dr Sandra D Knapp Dr Malcolm Scoble Dr John David Dr Keith Maybury Dr Terry Langford Dr Malcolm Scoble EDITORIAL Prof Geoff Moore Dr John R Edmondson Dr Sylvia Phillips Treasurer Mr Terence Preston Professor Gren Ll Lucas OBE COLLECTIONS Dr Max Telford Mrs Susan Gove Dr Mark Watson Dr David Williams Executive Secretary Librarian Prof Patricia Willmer Dr Ruth Temple Mrs Lynda Brooks Conservator Financial Controller/Membership Assistant Librarian Ms Janet Ashdown Mr Priya Nithianandan Mr Ben Sherwood Special Publications Building and Office Manager Honorary Archivist and Education Manager Ms Victoria Smith Ms Gina Douglas Ms Leonie Berwick Communications Manager Office Assistant Conservation Assistant Ms Claire Inman Mrs Catherine Tanner Ms Lucy Gosnay THE LINNEAN Newsletter and Proceedings of the Linnean Society of London ISSN 0950-1096 Edited by Brian G Gardiner Editorial .............................................................................................................. 1 Society News ........................................................................................................... -
Australasian Lichenology Number 49, July 2001
Australasian Lichenology Number 49, July 2001 Australasian Lichenology Number 49, July 2001 ISSN 1328-4401 2 mm ---.. 1 mm 0.5 mm Pyrenula deliquescens (c. Knight) Mull. Arg. First described in the middle 1800s, Pyrenulo deliquescens is widespread in New Zealand.on the bark .of trees and shrubs, especially sm.o.oth barked intr.oduced trees such as ash (Fraxinus) and .oak (Quercus). The species is th.ought t.o be endemic, but that w.on't be kn.own with any certainty until the entire genus has been m.ona graphed (see also b.ottom .of page 3). ANNOUNCEMENT 15th meeting .ofAustralasian lichenDlDgists-2002 2 NEW PUBLICATIONS Key tD the Genera .of Australian lichens-apDthecial crusts 2 FIDra .of Australia VDlume 58A (Lichens 3) . 3 RECENT LITERATURE ON AUSTRALASIAN LICHENS 4 ARTICLES McCarthy, PM-The genus Lithothelium (Pyrenulaceae) in Christmas Island, Indian Ocean ...................................................................................................... 7 Elix, JA; Wardlaw, JH-AnhydrDfusarubin lactDl frDm lichen SDurces ........... 10 Elix, JA; Kantvilas, G-TwD new species .of Parmeliaceae Oichenized AscDmy cDtina) frDm Tasmania .. ..................... .... .......................................................... 12 Galloway, DJ-Thelotrema macrocarpum C.W. Dodge belDngs in Chroodiscus .. 16 ADDITIONAL LICHEN RECORD FROM AUSTRALIA McCarthy, PM; Lucking, R (47)-Pocsia septemseptata Vezda ]8 ADDITIONAL LICHEN RECORD FROM THE PHILIPPINES Bawingan, P; Lumbsch, HT (l}-Pertusaria remota A.W. Archer 20 ADDITIONAL LICHEN RECORDS FROM NEW ZEALAND GallDway, DJ (34}-Caloplaca tornoensis H. Magn., Umbilicaria grisea HDffm., and Umbilicaria krascheninnikovii (Savicz) Zahlbr., three bipDlar lichens .. .. 21 GallDway, DJ; JDhnsDn, PN; Lumbsch, HT (35}-Seven cDrticDIDUS species .ofLee anora, with nDtes .on L. caesiorubella Ach. and L. carpinea (L.) Vain....