Molecular Orbital Theory
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Chemistry 2000 Slide Set 1: Introduction to the Molecular Orbital Theory
Chemistry 2000 Slide Set 1: Introduction to the molecular orbital theory Marc R. Roussel January 2, 2020 Marc R. Roussel Introduction to molecular orbitals January 2, 2020 1 / 24 Review: quantum mechanics of atoms Review: quantum mechanics of atoms Hydrogenic atoms The hydrogenic atom (one nucleus, one electron) is exactly solvable. The solutions of this problem are called atomic orbitals. The square of the orbital wavefunction gives a probability density for the electron, i.e. the probability per unit volume of finding the electron near a particular point in space. Marc R. Roussel Introduction to molecular orbitals January 2, 2020 2 / 24 Review: quantum mechanics of atoms Review: quantum mechanics of atoms Hydrogenic atoms (continued) Orbital shapes: 1s 2p 3dx2−y 2 3dz2 Marc R. Roussel Introduction to molecular orbitals January 2, 2020 3 / 24 Review: quantum mechanics of atoms Review: quantum mechanics of atoms Multielectron atoms Consider He, the simplest multielectron atom: Electron-electron repulsion makes it impossible to solve for the electronic wavefunctions exactly. A fourth quantum number, ms , which is associated with a new type of angular momentum called spin, enters into the theory. 1 1 For electrons, ms = 2 or − 2 . Pauli exclusion principle: No two electrons can have identical sets of quantum numbers. Consequence: Only two electrons can occupy an orbital. Marc R. Roussel Introduction to molecular orbitals January 2, 2020 4 / 24 The hydrogen molecular ion The quantum mechanics of molecules + H2 is the simplest possible molecule: two nuclei one electron Three-body problem: no exact solutions However, the nuclei are more than 1800 time heavier than the electron, so the electron moves much faster than the nuclei. -
Theoretical Methods That Help Understanding the Structure and Reactivity of Gas Phase Ions
International Journal of Mass Spectrometry 240 (2005) 37–99 Review Theoretical methods that help understanding the structure and reactivity of gas phase ions J.M. Merceroa, J.M. Matxaina, X. Lopeza, D.M. Yorkb, A. Largoc, L.A. Erikssond,e, J.M. Ugaldea,∗ a Kimika Fakultatea, Euskal Herriko Unibertsitatea, P.K. 1072, 20080 Donostia, Euskadi, Spain b Department of Chemistry, University of Minnesota, 207 Pleasant St. SE, Minneapolis, MN 55455-0431, USA c Departamento de Qu´ımica-F´ısica, Universidad de Valladolid, Prado de la Magdalena, 47005 Valladolid, Spain d Department of Cell and Molecular Biology, Box 596, Uppsala University, 751 24 Uppsala, Sweden e Department of Natural Sciences, Orebro¨ University, 701 82 Orebro,¨ Sweden Received 27 May 2004; accepted 14 September 2004 Available online 25 November 2004 Abstract The methods of the quantum electronic structure theory are reviewed and their implementation for the gas phase chemistry emphasized. Ab initio molecular orbital theory, density functional theory, quantum Monte Carlo theory and the methods to calculate the rate of complex chemical reactions in the gas phase are considered. Relativistic effects, other than the spin–orbit coupling effects, have not been considered. Rather than write down the main equations without further comments on how they were obtained, we provide the reader with essentials of the background on which the theory has been developed and the equations derived. We committed ourselves to place equations in their own proper perspective, so that the reader can appreciate more profoundly the subtleties of the theory underlying the equations themselves. Finally, a number of examples that illustrate the application of the theory are presented and discussed. -
Molecular Symmetry, Super-Rotation, and Semi-Classical Motion –
Molecular symmetry, super-rotation, and semi-classical motion – New ideas for old problems Inaugural - Dissertation zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Universität zu Köln vorgelegt von Hanno Schmiedt aus Köln Berichterstatter: Prof. Dr. Stephan Schlemmer Prof. Per Jensen, Ph.D. Tag der mündlichen Prüfung: 24. Januar 2017 Awesome molecules need awesome theories DR.SANDRA BRUENKEN, 2016 − Abstract Traditional molecular spectroscopy is used to characterize molecules by their structural and dynamical properties. Furthermore, modern experimental methods are capable of determining state-dependent chemical reaction rates. The understanding of both inter- and intra-molecular dynamics contributes exceptionally, for example, to the search for molecules in interstellar space, where observed spectra and reaction rates help in under- standing the various phases of stellar or planetary evolution. Customary theoretical models for molecular dynamics are based on a few fundamental assumptions like the commonly known ball-and-stick picture of molecular structure. In this work we discuss two examples of the limits of conventional molecular theory: Extremely floppy molecules where no equilibrium geometric structure is definable and molecules exhibiting highly excited rotational states, where the large angular momentum poses considerable challenges to quantum chemical calculations. In both cases, we develop new concepts based on fundamental symmetry considerations to overcome the respective limits of quantum chemistry. For extremely floppy molecules where numerous large-amplitude motions render a defini- tion of a fixed geometric structure impossible, we establish a fundamentally new zero-order description. The ‘super-rotor model’ is based on a five-dimensional rigid rotor treatment depending only on a single adjustable parameter. -
Molecular Symmetry
Molecular Symmetry Symmetry helps us understand molecular structure, some chemical properties, and characteristics of physical properties (spectroscopy) – used with group theory to predict vibrational spectra for the identification of molecular shape, and as a tool for understanding electronic structure and bonding. Symmetrical : implies the species possesses a number of indistinguishable configurations. 1 Group Theory : mathematical treatment of symmetry. symmetry operation – an operation performed on an object which leaves it in a configuration that is indistinguishable from, and superimposable on, the original configuration. symmetry elements – the points, lines, or planes to which a symmetry operation is carried out. Element Operation Symbol Identity Identity E Symmetry plane Reflection in the plane σ Inversion center Inversion of a point x,y,z to -x,-y,-z i Proper axis Rotation by (360/n)° Cn 1. Rotation by (360/n)° Improper axis S 2. Reflection in plane perpendicular to rotation axis n Proper axes of rotation (C n) Rotation with respect to a line (axis of rotation). •Cn is a rotation of (360/n)°. •C2 = 180° rotation, C 3 = 120° rotation, C 4 = 90° rotation, C 5 = 72° rotation, C 6 = 60° rotation… •Each rotation brings you to an indistinguishable state from the original. However, rotation by 90° about the same axis does not give back the identical molecule. XeF 4 is square planar. Therefore H 2O does NOT possess It has four different C 2 axes. a C 4 symmetry axis. A C 4 axis out of the page is called the principle axis because it has the largest n . By convention, the principle axis is in the z-direction 2 3 Reflection through a planes of symmetry (mirror plane) If reflection of all parts of a molecule through a plane produced an indistinguishable configuration, the symmetry element is called a mirror plane or plane of symmetry . -
Chapter 1 – Symmetry of Molecules – P. 1
Chapter 1 – Symmetry of Molecules – p. 1 - 1. Symmetry of Molecules 1.1 Symmetry Elements · Symmetry operation: Operation that transforms a molecule to an equivalent position and orientation, i.e. after the operation every point of the molecule is coincident with an equivalent point. · Symmetry element: Geometrical entity (line, plane or point) which respect to which one or more symmetry operations can be carried out. In molecules there are only four types of symmetry elements or operations: · Mirror planes: reflection with respect to plane; notation: s · Center of inversion: inversion of all atom positions with respect to inversion center, notation i · Proper axis: Rotation by 2p/n with respect to the axis, notation Cn · Improper axis: Rotation by 2p/n with respect to the axis, followed by reflection with respect to plane, perpendicular to axis, notation Sn Formally, this classification can be further simplified by expressing the inversion i as an improper rotation S2 and the reflection s as an improper rotation S1. Thus, the only symmetry elements in molecules are Cn and Sn. Important: Successive execution of two symmetry operation corresponds to another symmetry operation of the molecule. In order to make this statement a general rule, we require one more symmetry operation, the identity E. (1.1: Symmetry elements in CH4, successive execution of symmetry operations) 1.2. Systematic classification by symmetry groups According to their inherent symmetry elements, molecules can be classified systematically in so called symmetry groups. We use the so-called Schönfliess notation to name the groups, Chapter 1 – Symmetry of Molecules – p. 2 - which is the usual notation for molecules. -
Introduction to Molecular Orbital Theory
Chapter 2: Molecular Structure and Bonding Bonding Theories 1. VSEPR Theory 2. Valence Bond theory (with hybridization) 3. Molecular Orbital Theory ( with molecualr orbitals) To date, we have looked at three different theories of molecular boning. They are the VSEPR Theory (with Lewis Dot Structures), the Valence Bond theory (with hybridization) and Molecular Orbital Theory. A good theory should predict physical and chemical properties of the molecule such as shape, bond energy, bond length, and bond angles.Because arguments based on atomic orbitals focus on the bonds formed between valence electrons on an atom, they are often said to involve a valence-bond theory. The valence-bond model can't adequately explain the fact that some molecules contains two equivalent bonds with a bond order between that of a single bond and a double bond. The best it can do is suggest that these molecules are mixtures, or hybrids, of the two Lewis structures that can be written for these molecules. This problem, and many others, can be overcome by using a more sophisticated model of bonding based on molecular orbitals. Molecular orbital theory is more powerful than valence-bond theory because the orbitals reflect the geometry of the molecule to which they are applied. But this power carries a significant cost in terms of the ease with which the model can be visualized. One model does not describe all the properties of molecular bonds. Each model desribes a set of properties better than the others. The final test for any theory is experimental data. Introduction to Molecular Orbital Theory The Molecular Orbital Theory does a good job of predicting elctronic spectra and paramagnetism, when VSEPR and the V-B Theories don't. -
8.3 Bonding Theories >
8.3 Bonding Theories > Chapter 8 Covalent Bonding 8.1 Molecular Compounds 8.2 The Nature of Covalent Bonding 8.3 Bonding Theories 8.4 Polar Bonds and Molecules 1 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Molecular Orbitals How are atomic and molecular orbitals related? 2 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals • The model you have been using for covalent bonding assumes the orbitals are those of the individual atoms. • There is a quantum mechanical model of bonding, however, that describes the electrons in molecules using orbitals that exist only for groupings of atoms. 3 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals • When two atoms combine, this model assumes that their atomic orbitals overlap to produce molecular orbitals, or orbitals that apply to the entire molecule. 4 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Just as an atomic orbital belongs to a particular atom, a molecular orbital belongs to a molecule as a whole. • A molecular orbital that can be occupied by two electrons of a covalent bond is called a bonding orbital. 5 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Sigma Bonds When two atomic orbitals combine to form a molecular orbital that is symmetrical around the axis connecting two atomic nuclei, a sigma bond is formed. • Its symbol is the Greek letter sigma (σ). -
Chapter 4 Symmetry and Chemical Bonding
Chapter 4 Symmetry and Chemical Bonding 4.1 Orbital Symmetries and Overlap 4.2 Valence Bond Theory and Hybrid Orbitals 4.3 Localized and Delocalized Molecular Orbitals 4.4 MXn Molecules with Pi-Bonding 4.5 Pi-Bonding in Aromatic Ring Systems 4.1 Orbital Symmetries and Overlap Bonded state can be represented by a Schrödinger wave equation of the general form H; hamiltonian operator Ψ; eigenfunction E; eigenvalue It is customary to construct approximate wave functions for the molecule from the atomic orbitals of the interacting atoms. By this approach, when two atomic orbitals overlap in such a way that their individual wave functions add constructively, the result is a buildup of electron density in the region around the two nuclei. 4.1 Orbital Symmetries and Overlap The association between the probability, P, of finding the electron at a point in space and the product of its wave function and its complex conjugate. It the probability of finding it over all points throughout space is unity. N; normalization constant 4.1 Orbital Symmetries and Overlap Slater overlap integral; the nature and effectiveness of their interactions S>0, bonding interaction, a reinforcement of the total wave function and a buildup of electron density around the two nuclei S<0, antibonding interaction, decrease of electron density in the region around the two nuclei S=0, nonbonding interaction, electron density is essentially the same as before 4.1 Orbital Symmetries and Overlap Ballon representations: these are rough representations of 90-99% of the probability distribution, which as the product of the wave function and its complex conjugate (or simply the square, if the function is real). -
Molecular Symmetry
Molecular Symmetry 1 I. WHAT IS SYMMETRY AND WHY IT IS IMPORTANT? Some object are ”more symmetrical” than others. A sphere is more symmetrical than a cube because it looks the same after rotation through any angle about the diameter. A cube looks the same only if it is rotated through certain angels about specific axes, such as 90o, 180o, or 270o about an axis passing through the centers of any of its opposite faces, or by 120o or 240o about an axis passing through any of the opposite corners. Here are also examples of different molecules which remain the same after certain symme- try operations: NH3, H2O, C6H6, CBrClF . In general, an action which leaves the object looking the same after a transformation is called a symmetry operation. Typical symme- try operations include rotations, reflections, and inversions. There is a corresponding symmetry element for each symmetry operation, which is the point, line, or plane with respect to which the symmetry operation is performed. For instance, a rotation is carried out around an axis, a reflection is carried out in a plane, while an inversion is carried our in a point. We shall see that we can classify molecules that possess the same set of symmetry ele- ments, and grouping together molecules that possess the same set of symmetry elements. This classification is very important, because it allows to make some general conclusions about molecular properties without calculation. Particularly, we will be able to decide if a molecule has a dipole moment, or not and to know in advance the degeneracy of molecular states. -
Symmetry in Chemistry
SYMMETRY IN CHEMISTRY Professor MANOJ K. MISHRA CHEMISTRY DEPARTMENT IIT BOMBAY ACKNOWLEGDEMENT: Professor David A. Micha Professor F. A. Cotton 1 An introduction to symmetry analysis WHY SYMMETRY ? Hψ = Eψ For H – atom: Each member of the CSCO labels, For molecules: Symmetry operation R CSCO H is INVARIANT under R ( by definition too) 2 An introduction to symmetry analysis Hψ = Eψ gives NH3 normal modes = NH3 rotation or translation MUST be A1, A2 or E ! NO ESCAPING SYMMETRY! 3 Molecular Symmetry An introduction to symmetry analysis (Ref.: Inorganic chemistry by Shirver, Atkins & Longford, ELBS) One aspect of the shape of a molecule is its symmetry (we define technical meaning of this term in a moment) and the systematic treatment and symmetry uses group theory. This is a rich and powerful subject, by will confine our use of it at this stage to classifying molecules and draw some general conclusions about their properties. An introduction to symmetry analysis Our initial aim is to define the symmetry of molecules much more precisely than we have done so far, and to provide a notational scheme that confirms their symmetry. In subsequent chapters we extend the material present here to applications in bonding and spectroscopy, and it will become that symmetry analysis is one of the most pervasive techniques in inorganic chemistry. Symmetry operations and elements A fundamental concept of group theory is the symmetry operation. It is an action, such as a rotation through a certain angle, that leave molecules apparently unchanged. An example is the rotation of H2O molecule by 180 ° (but not any smaller angle) around the bisector of HOH angle. -
Langmuir Films of Anthracene Derivatives on Liquid Mercury II: Asymmetric Molecules
2580 J. Phys. Chem. C 2007, 111, 2580-2587 Langmuir Films of Anthracene Derivatives on Liquid Mercury II: Asymmetric Molecules L. Tamam Department of Physics, Bar-Ilan UniVersity, Ramat-Gan 52900, Israel H. Kraack Department of Physics, Bar-Ilan UniVersity, Ramat-Gan 52900, Israel E. Sloutskin Department of Physics, Bar-Ilan UniVersity, Ramat-Gan 52900, Israel B. M. Ocko Department of Physics, BrookhaVen National Laboratory, Upton, New York 11973 P. S. Pershan Department of Physics and DEAS, HarVard UniVersity, Cambridge, Massachusetts 02138 E. Ofer Department of Physics, Bar-Ilan UniVersity, Ramat-Gan 52900, Israel M. Deutsch* Department of Physics, Bar-Ilan UniVersity, Ramat-Gan 52900, Israel ReceiVed: June 23, 2006; In Final Form: NoVember 28, 2006 The structure and phase sequence of liquid-mercury-supported Langmuir films (LFs) of anthrone and anthralin were studied by surface tensiometry and surface-specific synchrotron X-ray diffraction. In the low-coverage phase the molecules are both side-lying, rather than the flat-lying orientation found for anthracene and anthraquinone. In the high-coverage phase, the molecules are either standing up (anthrone) or remain side- lying (anthralin) on the mercury surface. In contrast with the symmetric anthracene and anthraquinone, both high-coverage phases exhibit long-range in-plane order. The order is different for the two compounds. The structural details, the role of molecular symmetry, the oxygen side groups, and the asymmetry-induced dipole moments are discussed. I. Introduction The previous paper1 detailed the reasons for undertaking the present study, discussed the measurement methods, and pre- sented the results obtained for mercury-supported Langmuir films (LFs) of anthracene and anthraquinone molecules, the structure of which is symmetric relative to both the long and short axes of the molecules. -
Covalent Bonding and Molecular Orbitals
Covalent Bonding and Molecular Orbitals Chemistry 35 Fall 2000 From Atoms to Molecules: The Covalent Bond n So, what happens to e- in atomic orbitals when two atoms approach and form a covalent bond? Mathematically: -let’s look at the formation of a hydrogen molecule: -we start with: 1 e-/each in 1s atomic orbitals -we’ll end up with: 2 e- in molecular obital(s) HOW? Make linear combinations of the 1s orbital wavefunctions: ymol = y1s(A) ± y1s(B) Then, solve via the SWE! 2 1 Hydrogen Wavefunctions wavefunctions probability densities 3 Hydrogen Molecular Orbitals anti-bonding bonding 4 2 Hydrogen MO Formation: Internuclear Separation n SWE solved with nuclei at a specific separation distance . How does the energy of the new MO vary with internuclear separation? movie 5 MO Theory: Homonuclear Diatomic Molecules n Let’s look at the s-bonding properties of some homonuclear diatomic molecules: Bond order = ½(bonding e- - anti-bonding e-) For H2: B.O. = 1 - 0 = 1 (single bond) For He2: B.O. = 1 - 1 = 0 (no bond) 6 3 Configurations and Bond Orders: 1st Period Diatomics Species Config. B.O. Energy Length + 1 H2 (s1s) ½ 255 kJ/mol 1.06 Å 2 H2 (s1s) 1 431 kJ/mol 0.74 Å + 2 * 1 He2 (s1s) (s 1s) ½ 251 kJ/mol 1.08 Å 2 * 2 He2 (s1s) (s 1s) 0 ~0 LARGE 7 Combining p-orbitals: s and p MO’s antibonding end-on overlap bonding antibonding side-on overlap bonding antibonding bonding8 4 2nd Period MO Energies s2p has lowest energy due to better overlap (end-on) of 2pz orbitals p2p orbitals are degenerate and at higher energy than the s2p 9 2nd Period MO Energies: Shift! For Z <8: 2s and 2p orbitals can interact enough to change energies of the resulting s2s and s2p MOs.