UNIVERSIDADE FEDERAL DE CAMPINA GRANDE Programa De Pós-Graduação Em Ciências Naturais E Biotecnologia MESTRADO EM CIÊNCIAS

Total Page:16

File Type:pdf, Size:1020Kb

UNIVERSIDADE FEDERAL DE CAMPINA GRANDE Programa De Pós-Graduação Em Ciências Naturais E Biotecnologia MESTRADO EM CIÊNCIAS UNIVERSIDADE FEDERAL DE CAMPINA GRANDE Programa de Pós-Graduação em Ciências Naturais e Biotecnologia MESTRADO EM CIÊNCIAS NATURAIS E BIOTECNOLOGIA COMPARAÇÕES DAS COMUNIDADES NEMATOFAUNÍSTICAS DE TRÊS AMBIENTES COSTEIROS DO NORDESTE BRASILEIRO POR MEIO DE RESOLUÇÕES TAXONÔMICAS CUITÉ-PB 2016 AMANDA GONÇALVES SANTOS COMPARAÇÕES DAS COMUNIDADES NEMATOFAUNÍSTICAS DE TRÊS AMBIENTES COSTEIROS DO NORDESTE BRASILEIRO POR MEIO DE RESOLUÇÕES TAXONÔMICAS Dissertação apresentada ao curso de Mestrado em Ciências Naturais e Biotecnologia da Universidade Federal de Campina Grande Campus-Cuité como requisito para obtenção do título de Mestre em Ciências Naturais e Biotecnologia. Orientador: Dr. Francisco José Victor de Castro Co-orientador (a): Dra. Maria Cristina da Silva CUITÉ-PB 2016 Ao meu pai Antônio e a meu esposo Angelo. AGRADECIMENTOS Agradeço a Deus, por ter me dado capacidade de chegar até aqui. Agradeço ao meu orientador Francisco, por ter aceitado mais uma vez a tarefa de me orientar, pela paciência que teve e tem comigo, por acreditar que sou capaz, e por ser acima de tudo, um exemplo de humildade. À minha co-orientadora Cristina, por todos os ensinamentos passados (que não foram poucos), pela disponibilidade que sempre teve em ajudar e pela amizade conquistada. À CAPES, pela concessão da bolsa no ultimo ano de curso. Ao meu esposo e amigo Angelo, por ser o meu maior incentivador, não poupando esforços para que eu chegasse até o final de mais essa etapa acadêmica, sendo paciente e compreensivo com as minhas ausências. Ao meu pai, que apesar de distante, nunca deixou de me apoiar e de me dar motivos pra me fazer seguir em frente. Ao meu irmão Anderson, que apesar de distante sempre esteve ao meu lado e torcendo por minhas conquistas. Ao meu tio Duda, pelo carinho, atenção e preocupação de sempre. À dona Amparo e seu Arlindo, por terem me recebido em sua casa, sempre muito atenciosos. À Baby, Dinda e Rayane, pela amizade, pelas conversas e por me fazer sentir parte da família. À André e Renner, por terem aceitado participar da banca avaliadora. Aos meus colegas do LABMEIO, Fátima, Géssica, Fábio, Taynan, Johab, Cléia, pelas conversas e boa convivência, em especial Edclebeson e Bruna pela amizade e troca de conhecimentos. À Ana Emília, Aluska, Érica, Ageu, Mônica e Fernanda, por todos os momentos que passamos juntos, pelo companheirismo de sempre, e pela amizade construída durante o curso. Ao professor Márcio Frazão, pela disponibilidade em buscar os equipamentos para as fotos dos nematódeos. À Giva e Júlio, por me auxiliarem com as fotos. E aos que tenham contribuído de forma direta ou indireta, para conclusão desse projeto. “A mente que se abre a uma nova ideia jamais volta ao seu tamanho original” Albert Einstein RESUMO Os nematódeos são os metazoários mais abundantes do planeta. Estima-se que três quartos, ou mais, de todos os animais da terra são nematódeos. Podem ser encontrados em todos os habitats que forneçam fontes de carbono orgânico disponíveis. Variam de acordo com a sensibilidade a poluentes e perturbação ambiental. Por esses motivos vem sendo utilizados, como ferramenta para biomonitoramento de ecossistemas. A resolução taxonômica diminui o problema do “impedimento taxonômico”, causado pela carência de pesquisadores nesta área e pela dificuldade na identificação dos organismos nos níveis taxonômicos mais baixos. Assim, objetivou-se comparar as estruturas populacionais nematofaunística, pelo uso de resoluções taxonômicas em três ambientes costeiros, a fim de ampliar a utilização da “resolução taxonômica” e enfatizar a sua importância como uma boa ferramenta de suporte as pesquisas de cunho taxonômico, principalmente nas que envolvam o monitoramento ambiental. Foram realizadas coletas em período chuvoso e seco, em ponto fixo da praia, do recife e do estuário de Pirangi do Sul - RN, Brasil. Os nematódeos encontrados foram identificados até o nível de espécie. Foram encontrados 46 gêneros e 56 espécies, pertencentes à 15 famílias, sendo 9 espécies novas para a ciência. As análises estatísticas mostraram que os níveis taxonômicos utilizados apontam diferenças na organização da comunidade, entre as estações de coleta, com exceção do nível específico. As diferenças também foram observadas para análises espaciais, com exceção do nível de ordem. A classificação até o nível de gênero se mostra taxonômicamente suficiente para interpretar os dados da comunidade nematofaunística da região de Pirangi do Sul-RN, para análises espaciais. Palavras chave: Nematódeo, monitoramento, habitats. ABSTRACT Nematodes are the most abundant metazoans in the planet. It is estimated that three- quarters or more of all land animals are nematodes. They can be found in all habitats that provide sources of organic carbon available. They still vary according to the sensitivity to pollutants and environmental disturbance. For these reasons it is being used as an instrument for biomonitoring ecosystems. The taxonomic resolution reduces the problem of "taxonomic impediment" caused by the scarcity of researchers in this area and the difficulty in identifying organisms at lower taxonomic levels. Thus, this study aimed at comparing the nematofaunistic population structures through the use of taxonomic resolutions in three coastal environments in order to expand the use of taxonomic resolution and emphasize its importance as a good resource support in the researches of taxonomic aspects, especially in those involving environmental monitoring. Samplings in rainy and dry season were made, in a fixed point at the beach, of the reef and estuary of Pirangi do Sul - RN, Brazil. The found nematodes were identified up to the species level. They were found 46 genera belonging to 15 families and 56 species being 9 of them new to science. Statistical analyzes showed that the taxonomic levels used in this research point to differences in the community´s organization, among the sampling stations, except the specific level. Differences were also observed for spatial analysis, with the exception of the order level. Classification up to the genus level has shown taxonomically enough to interpret the data nematofaunistic community of Pirangi-RN southern region for spatial analysis. Keywords: Nematode; monitoring; habitats. LISTA DE FIGURAS CAPÍTULO 1 - BIODIVERSIDADE DA COMUNIDADE NEMATOFAUNÍSTICA DE TRÊS AMBIENTES COSTEIROS Figura 1- Mapa da Região de Pirangi do Sul-RN, Brasil, evidenciando os ecossistemas de coleta.........................................................................................................................................32 Figura 2- Praia de Pirangi do Sul-Rio Grande do Norte................................................................33 Figura 3- Recifes de Arenito da Região de Pirangi do Sul-Rio Grande do Norte...................34 Figura 4- Estuário do rio Pirangi, na região de Pirangi do Sul-Rio Grande do Norte.............35 Figura 5- Esquema mostrando caracteres de morfometria utilizados na identificação dos Nematoda..................................................................................................................................58 Figura 6- Composição quali-quantitativa dos gêneros encontrados em Pirangi do Sul-RN....59 Figura 7- Bathylaimus australis Cobb, 1894 A: órgãos reprodutores; B: região anterior com ênfase no anfídio; C: Região anterior com ênfase na cavidade bucal. Barras de escalas=30µm............................................................................................................................71 Figura 8- Chromadorita sp. nov. A: Cutícula com ênfase na diferenciação lateral; B: órgãos reprodutores; C: região anterior com ênfase nas setas cefálicas e na cavidade bucal; D: padrão cuticular; E: suplementos pré-cloacais. Barras de escalas= 30µm............................................77 Figura 9- Endeolophos sp. nov. A: região anterior com ênfase no anfídio e na cutícula; B: órgãos reprodutores; C: diferenciação lateral. Barras de escalas= 30µm.................................80 Figura 10- Neochromadora trichophora Gerlach, 1951. A: padrão cuticular com ênfase na diferenciação lateral; B: região anterior com ênfase na cavidade bucal; C: órgãos reprodutores. Barras de escalas= 30µm....................................................................................84 Figura 11- Nannolaimoides sp. nov. A: região anterio com ênfase na cavidade bucal; B: suplementos pré-cloacais; C: órgão reprodutores do macho evidenciando a aba do gubernáculo; D: espícula. Barras de escalas= 30µm.................................................................87 Figura 12- Parancanthonchus cochlearis Gerlach, 1957. A: órgãos reprodutores; B: região anterior com ênfase no dente dorsal. Barras de escalas= 30µm................................................92 Figura 13- Calomicrolaimus rugatus Lorenzen, 1976. A: órgãos reprodutores e espessamento dos anéis cuticulares na porção ventral; B: Anfídio; C: região anterior com ênfase na cavidade bucal e nas setas cefálicas. Barras de escalas= 30µm...............................................................97 Figura 14- Calomicrolaimus sp. nov. A: Anfídio com o corpus gelatum para o exterior do corpo; B: região anterior com ênfase nas cerdas cefálicas; C: órgãos reprodutores; D: cerdas pós-cloacais. Barras de escalas= 30µm.....................................................................................99 Figura 15- Bolbolaimus sp. nov. A: órgão reprodutores; B: suplementos pré-cloacais; C: anfídio; D: bulbo anterior; E: bulbo posterior. Barras de escalas= 30µm...............................102
Recommended publications
  • Biogeographic Atlas of the Southern Ocean
    Census of Antarctic Marine Life SCAR-Marine Biodiversity Information Network BIOGEOGRAPHIC ATLAS OF THE SOUTHERN OCEAN CHAPTER 5.3. ANTARCTIC FREE-LIVING MARINE NEMATODES. Ingels J., Hauquier F., Raes M., Vanreusel A., 2014. In: De Broyer C., Koubbi P., Griffiths H.J., Raymond B., Udekem d’Acoz C. d’, et al. (eds.). Biogeographic Atlas of the Southern Ocean. Scientific Committee on Antarctic Research, Cambridge, pp. 83-87. EDITED BY: Claude DE BROYER & Philippe KOUBBI (chief editors) with Huw GRIFFITHS, Ben RAYMOND, Cédric d’UDEKEM d’ACOZ, Anton VAN DE PUTTE, Bruno DANIS, Bruno DAVID, Susie GRANT, Julian GUTT, Christoph HELD, Graham HOSIE, Falk HUETTMANN, Alexandra POST & Yan ROPERT-COUDERT SCIENTIFIC COMMITTEE ON ANTARCTIC RESEARCH THE BIOGEOGRAPHIC ATLAS OF THE SOUTHERN OCEAN The “Biogeographic Atlas of the Southern Ocean” is a legacy of the International Polar Year 2007-2009 (www.ipy.org) and of the Census of Marine Life 2000-2010 (www.coml.org), contributed by the Census of Antarctic Marine Life (www.caml.aq) and the SCAR Marine Biodiversity Information Network (www.scarmarbin.be; www.biodiversity.aq). The “Biogeographic Atlas” is a contribution to the SCAR programmes Ant-ECO (State of the Antarctic Ecosystem) and AnT-ERA (Antarctic Thresholds- Ecosys- tem Resilience and Adaptation) (www.scar.org/science-themes/ecosystems). Edited by: Claude De Broyer (Royal Belgian Institute of Natural Sciences, Brussels) Philippe Koubbi (Université Pierre et Marie Curie, Paris) Huw Griffiths (British Antarctic Survey, Cambridge) Ben Raymond (Australian
    [Show full text]
  • World Database of Free-Living Marine Nematodes Editor Workshop Report
    World Database of Free-Living Marine Nematodes Editor Workshop Ghent University – Marine Biology Research Group – Ghent, Belgium 05 - 07 September 2018 Email to contact all Nemys editors: [email protected] Report Attendants Editors: Tania Nara Bezerra, Ann Vanreusel, Mike Hodda, Zeng Zhao, Ursula Eisendle-Flöckner, Oleksandr Holovachov, Virág Venekey, Nic Smol, Wilfrida Decraemer, Dmitry Miljutin, Vadim Mokievsky Excused: Daniel Leduc, Jyotsna Sharma, Reyes Peña Santiago, Alexei Tchesunov WoRMS Data Management Team (DMT): Bart Vanhoorne, Wim Decock, Thomas Lanssens, Ricardo Simões Excused: Leen Vandepitte The first Nemys Editors Workshop in February 2015 result in a considerable improvement of the database and in 2016 during the Meiofauna Conference in Crete, where some of the editors were present, some issues were also discussed. These possibilities of having the editors working alongside provide an efficient work in a shorter time. We definitely need to have these workshops periodically. The objectives of this workshop were: (i) to evaluate the work that has been done over the past three years and the maintenance of the database, (ii) to welcome the editors of terrestrial and fresh water nematodes, set clear goals, assign tasks and initiate the practical work related to new initiatives and (iii) to outline practices for outreach and scientific output for Nemys (e.g. scientific papers, presentations of the progress, plans and results at an upcoming conference). On the first day it was asked to have a rapporteur for each session in order to have it registered. The original minutes are on a separate document and were used to generate this report. This report includes: I.
    [Show full text]
  • Free-Living Marine Nematodes from San Antonio Bay (Río Negro, Argentina)
    A peer-reviewed open-access journal ZooKeys 574: 43–55Free-living (2016) marine nematodes from San Antonio Bay (Río Negro, Argentina) 43 doi: 10.3897/zookeys.574.7222 DATA PAPER http://zookeys.pensoft.net Launched to accelerate biodiversity research Free-living marine nematodes from San Antonio Bay (Río Negro, Argentina) Gabriela Villares1, Virginia Lo Russo1, Catalina Pastor de Ward1, Viviana Milano2, Lidia Miyashiro3, Renato Mazzanti3 1 Laboratorio de Meiobentos LAMEIMA-CENPAT-CONICET, Boulevard Brown 2915, U9120ACF, Puerto Madryn, Argentina 2 Universidad Nacional de la Patagonia San Juan Bosco, sede Puerto Madryn. Boulevard Brown 3051, U9120ACF, Puerto Madryn, Argentina 3Centro de Cómputos CENPAT-CONICET, Boulevard Brown 2915, U9120ACF, Puerto Madryn, Argentina Corresponding author: Gabriela Villares ([email protected]) Academic editor: H-P Fagerholm | Received 18 November 2015 | Accepted 11 February 2016 | Published 28 March 2016 http://zoobank.org/3E8B6DD5-51FA-499D-AA94-6D426D5B1913 Citation: Villares G, Lo Russo V, Pastor de Ward C, Milano V, Miyashiro L, Mazzanti R (2016) Free-living marine nematodes from San Antonio Bay (Río Negro, Argentina). ZooKeys 574: 43–55. doi: 10.3897/zookeys.574.7222 Abstract The dataset of free-living marine nematodes of San Antonio Bay is based on sediment samples collected in February 2009 during doctoral theses funded by CONICET grants. A total of 36 samples has been taken at three locations in the San Antonio Bay, Santa Cruz Province, Argentina on the coastal littoral at three tidal levels. This presents a unique and important collection for benthic biodiversity assessment of Patagonian nematodes as this area remains one of the least known regions.
    [Show full text]
  • Taxonomy Assignment Approach Determines the Efficiency of Identification of Metabarcodes in Marine Nematodes
    Taxonomy assignment approach determines the efficiency of identification of metabarcodes in marine nematodes Oleksandr Holovachov1, Quiterie Haenel2, Sarah J. Bourlat3 and Ulf Jondelius1 1Department of Zoology, Swedish Museum of Natural History, Stockholm, Sweden 2Zoological Institute, University of Basel, Switzerland 3Department of Marine Sciences, University of Gothenburg, Sweden Abstract: Precision and reliability of barcode-based biodiversity assessment can be affected at several steps during acquisition and analysis of the data. Identification of barcodes is one of the crucial steps in the process and can be accomplished using several different approaches, namely, alignment-based, probabilistic, tree-based and phylogeny-based. Number of identified sequences in the reference databases affects the precision of identification. This paper compares the identification of marine nematode barcodes using alignment-based, tree-based and phylogeny-based approaches. Because the nematode reference dataset is limited in its taxonomic scope, barcodes can only be assigned to higher taxonomic categories, families. Phylogeny-based approach using Evolutionary Placement Algorithm provided the largest number of positively assigned metabarcodes and was least affected by erroneous sequences and limitations of reference data, comparing to alignment- based and tree-based approaches. Key words: biodiversity, identification, barcode, nematodes, meiobenthos. 1 1. Introduction Metabarcoding studies based on high throughput sequencing of amplicons from marine samples have reshaped our understanding of the biodiversity of marine microscopic eukaryotes, revealing a much higher diversity than previously known [1]. Early metabarcoding of the slightly larger sediment-dwelling meiofauna have mainly focused on scoring relative diversity of taxonomic groups [1-3]. The next step in metabarcoding: identification of species, is limited by the available reference database, which is sparse for most marine taxa, and by the matching algorithms.
    [Show full text]
  • A Taxonomic Hierarchy and Checklist of the Genera and Higher Taxa of Marine Nematodes
    A Taxonomic Hierarchy and Checklist of the Genera and Higher Taxa of Marine Nematodes w. D. HOPE and D. G. MURPHY SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 137 SERIAL PUBLICATIONS OF THE SMITHSONIAN INSTITUTION The emphasis upon publications as a means of diffusing knowledge was expressed by the first Secretary of the Smithsonian Institution. In his formal plan for the Insti- tution, Joseph Henry articulated a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This keynote of basic research has been adhered to over the years in the issuance of thousands of titles in serial publications under the Smithsonian imprint, com- mencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Annals of Flight Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Studies in History and Technology In these series, the Institution publishes original articles and monographs dealing with the research and collections of its several museums and offices and of professional colleagues at other institutions of learning. These papers report newly acquired facts, synoptic interpretations of data, or original theory in specialized fields. These pub- lications are distributed by mailing lists to libraries, laboratories, and other interested institutions and specialists throughout the world. Individual copies may be obtained from the Smithsonian Institution Press as long as stocks are available.
    [Show full text]
  • Checklist of the Subfamily Adoncholaiminae Gerlach and Riemann, 1974
    Biodiversity Data Journal 4: e6577 doi: 10.3897/BDJ.4.e6577 Taxonomic Paper Checklist of the subfamily Adoncholaiminae Gerlach and Riemann, 1974 (Nematoda: Oncholaimida: Oncholaimidae) of the world: genera, species, distribution, and reference list for taxonomists and ecologists Daisuke Shimada ‡ ‡ Department of Biology, Keio University, 4-1-1, Hiyoshi, Yokohama, 223-8521, Japan Corresponding author: Daisuke Shimada ([email protected]) Academic editor: Vlada Peneva Received: 15 Sep 2015 | Accepted: 18 Jan 2016 | Published: 20 Jan 2016 Citation: Shimada D (2016) Checklist of the subfamily Adoncholaiminae Gerlach and Riemann, 1974 (Nematoda: Oncholaimida: Oncholaimidae) of the world: genera, species, distribution, and reference list for taxonomists and ecologists. Biodiversity Data Journal 4: e6577. doi: 10.3897/BDJ.4.e6577 Abstract Background Adoncholaiminae is one of the seven subfamilies in the free-living aquatic nematode family Oncholaimidae. Nematodes in Adoncholaiminae are found from various water environment of the world. However, a checklist of all Adoncholaiminae species including full literature, especially information of experimental (not taxonomic) works, has not been updated for more than 40 years. New information A revised checklist of the subfamily Adoncholaiminae of the world is provided. It contains 31 valid and 13 invalid species names in four genera with synonyms, collection records, © Shimada D. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 2 Shimada D and full literature from 1860's to 2015 for each species. A literature survey of total 477 previous papers was conducted in this work, and 362 of them are newly added to checklist.
    [Show full text]
  • Three New Free-Living Nematode Species (Nematoda, Enoplida) from Mangrove Habitats of Nha Trang, Central Vietnam
    Russian Journal of Nematology, 2010, 18 (2), 155 - 173 Three new free-living nematode species (Nematoda, Enoplida) from mangrove habitats of Nha Trang, Central Vietnam Alexei V. Tchesunov1, Vadim O. Mokievsky2 and Nguyen Vu Thanh3 1Department of Invertebrate Zoology, Faculty of Biology, Moscow State University, Moscow, 119991, Russia; e-mail: [email protected] 2P.P. Shirshov’s Institute of Oceanology, Russian Academy of Sciences, Nakhimovsky prosp., 36, Moscow, 117851, Russia 3Institute of Ecology and Biological Resources (IEBR), Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Rd., 10000 Hanoi, Vietnam Accepted for publication 22 August 2010 Summary. Three new nematode species of the order Enoplida were found in a degrading mangrove biotope in the Bay of Nha Trang, Central Vietnam. Admirandus belogurovi sp. n. (Oncholaimidae), a second species of the genus, differs from the only other species, A. multicavus Belogurov et Belogurova, 1979, in having shorter spicules (41-49 vs 71-110 µm) and some measurements, as well as presence of a small midventral preanal supplementary papilla. Diagnosis of the genus Admirandus Belogurov et Belogurova, 1979 is emended. Tripyloides caudaensis sp. n. (Tripyloididae) is close to a group of species T. gracilis (Ditlevsen, 1918), T. marinus (Bütschli, 1874) and T. pallidus Tchesunov, 1981 with partly overlapped measurements and differs from them in shape of the tail consisting of distinct proximal conical and distal slender cylindrical portions and from T. pallidus additionally by oviparity vs viviparity. An annotated list of eleven valid species and a pictorial key for identification of Tripylodes species are given. Litinium subterraneum sp. n. (Oxystominidae) is characterised by the position of the amphideal fovea closely behind the circle of twelve anterior setae and presence of two preanal supplementary papillae.
    [Show full text]
  • The Evolution of Parasitism in Nematoda
    SUPPLEMENT ARTICLE S26 The evolution of parasitism in Nematoda MARK BLAXTER* and GEORGIOS KOUTSOVOULOS Institute of Evolutionary Biology, The University of Edinburgh, Edinburgh EH9 3JT, UK (Received 19 February 2014; revised 16 April 2014; accepted 16 April 2014; first published online 25 June 2014) SUMMARY Nematodes are abundant and diverse, and include many parasitic species. Molecular phylogenetic analyses have shown that parasitism of plants and animals has arisen at least 15 times independently. Extant nematode species also display lifestyles that are proposed to be on the evolutionary trajectory to parasitism. Recent advances have permitted the determination of the genomes and transcriptomes of many nematode species. These new data can be used to further resolve the phylogeny of Nematoda, and identify possible genetic patterns associated with parasitism. Plant-parasitic nematode genomes show evidence of horizontal gene transfer from other members of the rhizosphere, and these genes play important roles in the parasite-host interface. Similar horizontal transfer is not evident in animal parasitic groups. Many nematodes have bacterial symbionts that can be essential for survival. Horizontal transfer from symbionts to the nematode is also common, but its biological importance is unclear. Over 100 nematode species are currently targeted for sequencing, and these data will yield important insights into the biology and evolutionary history of parasitism. It is important that these new technologies are also applied to free-living taxa, so that the pre-parasitic ground state can be inferred, and the novelties associated with parasitism isolated. Key words: Nematoda, nematodes, parasitism, evolution, genome, symbiont, Wolbachia, phylogeny, horizontal gene transfer. THE DIVERSITY OF THE NEMATODA medical and veterinary science.
    [Show full text]
  • A Focus on the Enoplida and Early-Branching Clades
    University of New Hampshire University of New Hampshire Scholars' Repository Hubbard Center for Genome Studies (HCGS) Research Institutes, Centers and Programs 11-12-2010 Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades Holly M. Bik Natural History Museum, London P. John D. Lambshead National Oceanography Centre W. Kelley Thomas University of New Hampshire, [email protected] David H. Lunt University of Hull Follow this and additional works at: https://scholars.unh.edu/hubbard Part of the Ecology and Evolutionary Biology Commons Recommended Citation Bik et al.: Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades. BMC Evolutionary Biology 2010 10:353. This Article is brought to you for free and open access by the Research Institutes, Centers and Programs at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Hubbard Center for Genome Studies (HCGS) by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. Bik et al. BMC Evolutionary Biology 2010, 10:353 http://www.biomedcentral.com/1471-2148/10/353 RESEARCH ARTICLE Open Access Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades Holly M Bik1,2,3*, P John D Lambshead2, W Kelley Thomas3, David H Lunt4 Abstract Background: The subclass Enoplia (Phylum Nematoda) is purported to be the earliest branching clade amongst all nematode taxa, yet the deep phylogeny of this important lineage remains elusive.
    [Show full text]
  • (Dinosauria: Theropoda) from the Upper Cretaceous of Southern China
    Zootaxa 3640 (2): 242–257 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2013 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3640.2.7 http://zoobank.org/urn:lsid:zoobank.org:pub:8BBEDAD4-1D6B-46CC-B66B-EF51D84FCAE4 A new oviraptorid (Dinosauria: Theropoda) from the Upper Cretaceous of south- ern China SHUO WANG1,2, CHENGKAI SUN3, CORWIN SULLIVAN1 & XING XU1 1Key Laboratory of Vertebrate Evolution and Human Origin of Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, 142 Xiwai Street, Beijing 100044, China. E-mail: [email protected] 2University of Chinese Academy of Sciences, Beijing 100049, China 3Division of Natural History, Shandong Museum, Jinan 250014, China Abstract This paper describes a new oviraptorid dinosaur taxon, Ganzhousaurus nankangensis gen. et sp. nov., based on a specimen collected from the Upper Cretaceous Nanxiong Formation of Nankang County, Ganzhou City, Jiangxi Province, southern China. This new taxon is distinguishable from other oviraptorids based on the following unique combination of primitive and derived features: relatively shallow dentary; absence of fossa or pneumatopore on lateral surface of dentary; weakly downturned anterior mandibular end; shallow depression immediately surrounding anterior margin of external mandibular fenestra; external mandibular fenestra subdivided by anterior process of surangular; dentary posteroventral process slight- ly twisted and positioned on mandibular ventrolateral surface; shallow longitudinal groove along medial surface of den- tary posteroventral process; angular anterior process wider transversely than deep dorsoventrally; sharp groove along ventrolateral surface of angular anterior process; ventral border of external mandibular fenestra formed mainly by angular; ventral flange along distal half of metatarsal II; and arctometatarsal condition absent.
    [Show full text]
  • Tese Doutorado Virag Venekey
    UNIVERSIDADE FEDERAL DE PERNAMBUCO CENTRO DE TECNOLOGIA E GEOCIÊNCIAS ESCOLA DE ENGENHARIA DE PERNAMBUCO DEPARTAMENTO DE OCEANOGRAFIA ATUALIZAÇÃO DO COHECIMETO TAXOÔMICO DOS EMATODA A COSTA BRASILEIRA E SUA ECOLOGIA A PRAIA DE TAMADARÉ-PE (BRASIL). VIRÁG VENEKEY RECIFE 2007 ii V455c Venekey, Virág. Atualização do conhecimento taxonômico dos Nematoda na costa brasileira e sua ecologia na praia de Tamandaré –PE (Brasil) / Virág Venekey. - Recife: O Autor, 2007. xxi, 144 folhas, il : figs., tabs. Tese (Doutorado) – Universidade Federal de Pernambuco. CTG. Programa de Pós-Graduação em Oceanografia, 2007. Inclui bibliografia e Anexos. 1. Oceanografia. 2. Nematoda. 3. Taxonomia. 4. Praia. 5. Ecologia. 6. Tamandaré-Brasil. I. Título. UFPE 551.46 CDD (22. ed.) BCTG/2008-046 VIRÁG VEEKEY iii ATUALIZAÇÃO DO COHECIMETO TAXOÔMICO DOS EMATODA A COSTA BRASILEIRA E SUA ECOLOGIA A PRAIA DE TAMADARÉ-PE (BRASIL). Tese de Doutorado apresentada ao Programa de Pós-graduação em Oceanografia da Universidade Federal de Pernambuco, como parte dos requisitos para obtenção do título de Doutor em Oceanografia, área de Oceanografia Biológica. Orientadora: Dra. Verônica Gomes da Fonsêca-Genevois Co-orientador: Dr. Paulo Jorge Parreira dos Santos RECIFE, 2007 iv v DEDICO: Ao meu pai Lajos Venekey ( in memoriam). vi Magyarország (Geszti Péter) Hungria (Péter Geszti) Van egy ország, Tem um país, ahol álmomban jártam: onde estive em meus sonhos: Magyarország, Hungria, ahol az arcodban láttam Onde vi no teu rosto, a magam arcát. o meu. Az ölelésben bőség, Num abraço a fartura, az igaz ügyben hűség voltál. na justiça você foi a lealdade. Én ezt az arcot már őrzöm, Eu já conservo este rosto, Magyarország! Hungria! Hiszek az álmomban egy életen át..
    [Show full text]
  • Outcrossing and Parasitism in the Nematode Phylum
    BRIEF COMMUNICATION doi:10.1111/evo.12565 A phylogenetic test of the Red Queen Hypothesis: Outcrossing and parasitism in the Nematode phylum Amanda Kyle Gibson1,2 and Jesualdo Arturo Fuentes1 1Department of Biology, Indiana University, Bloomington, Indiana 47405 2E-mail: [email protected] Received May 7, 2014 Accepted November 6, 2014 Sexual outcrossing is costly relative to selfing and asexuality, yet it is ubiquitous in nature, a paradox that has long puzzled evolutionary biologists. The Red Queen Hypothesis argues that outcrossing is maintained by antagonistic interactions between host and parasites. Most tests of this hypothesis focus on the maintenance of outcrossing in hosts. The Red Queen makes an additional prediction that parasitic taxa are more likely to be outcrossing than their free-living relatives. We test this prediction in the diverse Nematode phylum using phylogenetic comparative methods to evaluate trait correlations. In support of the Red Queen, we demonstrate a significant correlation between parasitism and outcrossing in this clade. We find that this correlation is driven by animal parasites, for which outcrossing is significantly enriched relative to both free-living and plant parasitic taxa. Finally, we test hypotheses for the evolutionary history underlying the correlation of outcrossing and animal parasitism. Our results demonstrate that selfing and asexuality are significantly less likely to arise on parasitic lineages than on free-living ones. The findings of this study are consistent with the Red Queen Hypothesis. Moreover, they suggest that the maintenance of genetic variation is an important factor in the persistence of parasitic lineages. KEY WORDS: Asexual reproduction, continuous-time Markov model, host–parasite coevolution, selfing, sexual outcrossing, stochastic character mapping.
    [Show full text]