Picophytoplankton Diversity and Photoacclimation in the Strait of Sicily (Mediterranean Sea) in Summer
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Selph Et Al-2021.Pdf
Journal of Plankton Research academic.oup.com/plankt Downloaded from https://academic.oup.com/plankt/advance-article/doi/10.1093/plankt/fbab006/6161505 by Florida State University Law Library user on 10 March 2021 J. Plankton Res. (2021) 1–20. doi:10.1093/plankt/fbab006 BLOOFINZ - Gulf of Mexico Phytoplankton community composition and biomass in the oligotrophic Gulf of Mexico KAREN E. SELPH1,*, RASMUS SWALETHORP2, MICHAEL R. STUKEL3,THOMASB.KELLY3, ANGELA N. KNAPP3, KELSEY FLEMING2, TABITHA HERNANDEZ2 AND MICHAEL R. LANDRY2 1department of oceanography, university of hawaii at manoa, 1000 pope road, honolulu, hi 96822, usa, 2scripps institution of oceanography, 9500 gilman drive, la jolla, ca 92093-0227, usa and 3department of earth, ocean and atmospheric science, florida state university, tallahassee, fl 32306, usa *corresponding author: [email protected] Received October 13, 2020; editorial decision January 10, 2021; accepted January 10, 2021 Corresponding editor: Lisa Campbell Biomass and composition of the phytoplankton community were investigated in the deep-water Gulf of Mexico (GoM) at the edges of Loop Current anticyclonic eddies during May 2017 and May 2018. Using flow cytometry, high-performance liquid chromatography pigments and microscopy, we found euphotic zone integrated chlorophyll aof ∼10 mg m−2 and autotrophic carbon ranging from 463 to 1268 mg m−2, dominated by picoplankton (<2μm cells). Phytoplankton assemblages were similar to the mean composition at the Bermuda Atlantic Time-series Study site, but differed from the Hawaii Ocean Times-series site. GoM phytoplankton biomass was ∼2-fold higher at the deep chlorophyll maximum (DCM) relative to the mixed layer (ML). Prochlorococcus and prymnesiophytes were the dominant taxa throughout the euphotic zone; however, other eukaryotic taxa had significant biomass in the DCM. -
Picophytoplankton Biomass Distribution in the Global Ocean
CMYK RGB History of Geo- and Space Open Access Open Sciences Advances in Science & Research Open Access Proceedings Drinking Water Drinking Water Engineering and Science Engineering and Science Open Access Access Open Discussions Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Discussions Earth Syst. Sci. Data Discuss., 5, 221–242, Earth 2012 System Earth System www.earth-syst-sci-data-discuss.net/5/221/2012/ Science Science doi:10.5194/essdd-5-221-2012 ESSDD © Author(s) 2012. CC Attribution 3.0 License. 5, 221–242, 2012 Open Access Open Open Access Open Data Data This discussion paper is/has been under review for the journal Earth System Science Discussions Picophytoplankton Data (ESSD). Please refer to the corresponding final paper in ESSD if available. Social Social biomass distribution in the global ocean Open Access Open Geography Open Access Open Geography Picophytoplankton biomass distribution E. T. Buitenhuis et al. in the global ocean Title Page E. T. Buitenhuis1, W. K. W. Li2, D. Vaulot3, M. W. Lomas4, M. Landry5, F. Partensky3, D. M. Karl6, O. Ulloa7, L. Campbell8, S. Jacquet9, F. Lantoine10, Abstract Instruments F. Chavez11, D. Macias12, M. Gosselin13, and G. B. McManus14 Data Provenance & Structure 1Tyndall Centre for Climate Change Research and School of Environmental Sciences, Tables Figures University of East Anglia, Norwich NR4 7TJ, UK 2Fisheries and Oceans Canada, Bedford Institute of Oceanography, Dartmouth, Nova Scotia, Canada J I 3UMR 7144 (CNRS and UPMC, Paris 06), Station Biologique, 29680 -
Coexistence of Phycoerythrin and a Chlorophyll A/B Antenna in a Marine Prokaryote (Prochlorophyta/Cyanobacteria/Phycobilins/Photosynthesis/Endosymbiosis) WOLFGANG R
Proc. Natl. Acad. Sci. USA Vol. 93, pp. 11126-11130, October 1996 Microbiology Coexistence of phycoerythrin and a chlorophyll a/b antenna in a marine prokaryote (Prochlorophyta/cyanobacteria/phycobilins/photosynthesis/endosymbiosis) WOLFGANG R. HESs*t, FREDEIRIC PARTENSKYt, GEORG W. M. VAN DER STAAYI, JOSE' M. GARCIA-FERNANDEZt, THOMAS BORNER*, AND DANIEL VAULOTt *Department of Biology, Humboldt-University, Chausseestrasse 117, D-10115 Berlin, Germany; and tStation Biologique de Roscoff, Centre National de la Recherche Scientifique Unite Propre de Recherche 9042 and Universite Pierre et Marie Curie, BP 74, F-29682 Roscoff Cedex, France Communicated by Hewson Swift, The University of Chicago, Chicago, IL, July 1Z 1996 (received for review June 7, 1996) ABSTRACT Prochlorococcus marinus CCMP 1375, a ubiq- tation maximum of the major chromophore bound by PE-III uitous and ecologically important marine prochlorophyte, corresponds to that of phycourobilin. was found to possess functional genes coding for the a and 1 subunits of a phycobiliprotein. The latter is similar to phy- coerythrins (PE) from marine Synechococcus cyanobacteria MATERIALS AND METHODS and bind a phycourobilin-like pigment as the major chro- Flow Cytometric Measurements. Sea water samples were mophore. However, differences in the sequences of the ca and collected at different depths during the France-Joint Global 13 chains compared with known PE subunits and the presence Ocean Flux Study OLIPAC cruise held in November 1994 of a single bilin attachment site on the a subunit designate it aboard the N.O. l'Atalante. Samples were analyzed immedi- as a novel PE type, which we propose naming PE-III. P. ately using a FACScan (Becton Dickinson) flow cytometer and marinus is the sole prokaryotic organism known so far that cell concentrations of Prochlorococcus and Synechococcus contains chlorophylls a and b as well as phycobilins. -
Prochlorophyta: a Sub-Class of Chlorophyta
PROCHLOROPHYTA: A SUB-CLASS OF CHLOROPHYTA Prochlorophyta are a photosynthetic prokaryote members of the phytoplankton group Picoplankton. These oligotrophic organisms are abundant in nutrient-poor tropical waters and use a unique photosynthetic pigment, divinyl-chlorophyll, to absorb light and acquire energy. These organisms lack red and blue Phycobilin pigments and have staked thylakoids, both of which make them different from Cyanophyta. Prochlorophyta were initially discovered in 1975 near the Great Barrier Reef and off the coast of Mexico. The following year, Ralph A. Lewin, of the Scripps Institution of Oceanography, assigned them as a new algal sub-class. Prochlorophytes are very small microbes generally between 0.2 and 2 µm (Photosynthetic picoplankton). They morphologically resemble Cyanobacteria, Members of Prochlorophyta have been found as coccoid (spherical) shapes, like Prochlorococcus, and as filaments, like Prochlorothrix. In addition to Prochlorophyta, other phytoplankton that lack Phycobilin pigments were later found in freshwater lakes in the Netherlands, by Tineke Burger-Wiersma. These organisms were termed Prochlorothrix. Prochloron (a marine symbiont) and Prochlorothrix (from freshwater plankton) contain chlorophylls a and b; Prochlorococcus (common in marine picoplankton) contains divinyl-chlorophylls a and b. In 1986, Prochlorococcus was discovered by Sallie W. Chisholm and his colleagues. These organisms might be responsible for a significant portion of the global primary production. Like cyanophytes they are all clearly photosynthetic prokaryotes, but since they contain no blue or red bilin pigment they were assigned to a new algal sub- class, the Prochlorophyta. However, since their possible phylogenetic relationships to ancestral green-plant chloroplasts have not received support from molecular biology, it now seems expedient to consider them as aberrant cyanophytes. -
Factors Controlling the Community Structure of Picoplankton in Contrasting Marine Environments
Biogeosciences, 15, 6199–6220, 2018 https://doi.org/10.5194/bg-15-6199-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 4.0 License. Factors controlling the community structure of picoplankton in contrasting marine environments Jose Luis Otero-Ferrer1, Pedro Cermeño2, Antonio Bode6, Bieito Fernández-Castro1,3, Josep M. Gasol2,5, Xosé Anxelu G. Morán4, Emilio Marañon1, Victor Moreira-Coello1, Marta M. Varela6, Marina Villamaña1, and Beatriz Mouriño-Carballido1 1Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, Vigo, Spain 2Institut de Ciències del Mar, Consejo Superior de Investigaciones Científicas, Barcelona, Spain 3Departamento de Oceanografía, Instituto de investigacións Mariñas (IIM-CSIC), Vigo, Spain 4King Abdullah University of Science and Technology (KAUST), Read Sea Research Center, Biological and Environmental Sciences and Engineering Division, Thuwal, Saudi Arabia 5Centre for Marine Ecosystem Research, School of Sciences, Edith Cowan University, WA, Perth, Australia 6Centro Oceanográfico de A Coruña, Instituto Español de Oceanografía (IEO), A Coruña, Spain Correspondence: Jose Luis Otero-Ferrer ([email protected]) Received: 27 April 2018 – Discussion started: 4 June 2018 Revised: 4 October 2018 – Accepted: 10 October 2018 – Published: 26 October 2018 Abstract. The effect of inorganic nutrients on planktonic as- played a significant role. Nitrate supply was the only fac- semblages has traditionally relied on concentrations rather tor that allowed the distinction among the ecological -
Subsurface Chlorophyll Maximum in August-September 1985 in the CLIMAX Area of the North Pacific
W&M ScholarWorks VIMS Articles 1988 Subsurface chlorophyll maximum in August-September 1985 in the CLIMAX area of the North Pacific RW Eppley E Swift DG Redalje MR Landry LW Haas Virginia Institute of Marine Science Follow this and additional works at: https://scholarworks.wm.edu/vimsarticles Part of the Marine Biology Commons Recommended Citation Eppley, RW; Swift, E; Redalje, DG; Landry, MR; and Haas, LW, "Subsurface chlorophyll maximum in August- September 1985 in the CLIMAX area of the North Pacific" (1988). VIMS Articles. 226. https://scholarworks.wm.edu/vimsarticles/226 This Article is brought to you for free and open access by W&M ScholarWorks. It has been accepted for inclusion in VIMS Articles by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. MARINE ECOLOGY - PROGRESS SERIES Vol. 42: 289301, 1988 Published February 24 Mar. Ecol. Prog. Ser. Subsurface chlorophyll maximum in August-September 1985 in the CLIMAX area of the North Pacific ' Institute of Marine Resources, A-018, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, USA Narragansett Marine Laboratory, University of Rhode Island, Kingston. Rhode Island 02881, USA Center for Marine Science, University of Southern Mississippi, National Space Technology Laboratories, NSTL, Mississippi 39529, USA Department of Oceanography, WB-10, University of Washington, Seattle, Washington 98195, USA Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, -
Deep Maxima of Phytoplankton Biomass, Primary Production and Bacterial Production in the Mediterranean Sea
Biogeosciences, 18, 1749–1767, 2021 https://doi.org/10.5194/bg-18-1749-2021 © Author(s) 2021. This work is distributed under the Creative Commons Attribution 4.0 License. Deep maxima of phytoplankton biomass, primary production and bacterial production in the Mediterranean Sea Emilio Marañón1, France Van Wambeke2, Julia Uitz3, Emmanuel S. Boss4, Céline Dimier3, Julie Dinasquet5, Anja Engel6, Nils Haëntjens4, María Pérez-Lorenzo1, Vincent Taillandier3, and Birthe Zäncker6,7 1Department of Ecology and Animal Biology, Universidade de Vigo, 36310 Vigo, Spain 2Mediterranean Institute of Oceanography, Aix-Marseille Université, CNRS, Université de Toulon, CNRS, IRD, MIO UM 110, 13288 Marseille, France 3Laboratoire d’Océanographie de Villefranche, Sorbonne Université, CNRS, 06230 Villefranche-sur-Mer, France 4School of Marine Sciences, University of Maine, Orono, Maine, USA 5Scripps Institution of Oceanography, University of California, San Diego, San Diego, California, USA 6GEOMAR, Helmholtz Centre for Ocean Research Kiel, 24105 Kiel, Germany 7The Marine Biological Association of the United Kingdom, Plymouth, PL1 2PB, United Kingdom Correspondence: Emilio Marañón ([email protected]) Received: 7 July 2020 – Discussion started: 20 July 2020 Revised: 5 December 2020 – Accepted: 8 February 2021 – Published: 15 March 2021 Abstract. The deep chlorophyll maximum (DCM) is a ubiq- 10–15 mgCm−3 at the DCM. As a result of photoacclima- uitous feature of phytoplankton vertical distribution in strati- tion, there was an uncoupling between chlorophyll a-specific fied waters that is relevant to our understanding of the mech- and carbon-specific productivity across the euphotic layer. anisms that underpin the variability in photoautotroph eco- The ratio of fucoxanthin to total chlorophyll a increased physiology across environmental gradients and has impli- markedly with depth, suggesting an increased contribution cations for remote sensing of aquatic productivity. -
The Ecological Importance of Deep Chlorophyll Maxima in The
THE ECOLOGICAL IMPORTANCE OF DEEP CHLOROPHYLL MAXIMA IN THE LAURENTIAN GREAT LAKES A Dissertation Presented to the Faculty of the Graduate School of Cornell University In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy by Anne Scofield August 2018 © 2018 Anne Scofield THE ECOLOGICAL IMPORTANCE OF DEEP CHLOROPHYLL MAXIMA IN THE LAURENTIAN GREAT LAKES Anne Scofield, Ph. D. Cornell University 2018 Deep chlorophyll maxima (DCM) are common in stratified lakes and oceans, and phytoplankton growth in DCM can contribute significantly to total ecosystem production. Understanding the drivers of DCM formation is important for interpreting their ecological importance. The overall objective of this research was to assess the food web implications of DCM across a productivity gradient, using the Laurentian Great Lakes as a case study. First, I investigated the driving mechanisms of DCM formation and dissipation in Lake Ontario during April–September 2013 using in situ profile data and phytoplankton community structure. Results indicate that in situ growth was important for DCM formation in early- to mid-summer but settling and photoadaptation contributed to maintenance of the DCM late in the stratified season. Second, I expanded my analysis to all five of the Great Lakes using a time series generated by the US Environmental Protection Agency (EPA) long-term monitoring program in August from 1996-2017. The cross-lake comparison showed that DCM were closely aligned with deep biomass maxima (DBM) and dissolved oxygen saturation maxima (DOmax) in meso-oligotrophic waters (eastern Lake Erie and Lake Ontario), suggesting that DCM are productive features. In oligotrophic to ultra-oligotrophic waters (Lakes Michigan, Huron, Superior), however, DCM were deeper than the DBM and DOmax, indicating that photoadaptation was of considerable importance. -
A Baseline Study of the Oceanography of the Chagos Archipelago
A Baseline Study of the Oceanography of the Chagos Archipelago Lewis Fasolo Honours Dissertation 1 ACKNOWLEDGEMENTS I would firstly like to acknowledge my supervisor Anya Waite for her wealth of knowledge that she so openly shared, and our consistent meetings that left me with a strong sense of direction. She went above and beyond, and was never out of reach. I would also like to thank my co-supervisor Jessica Meeuwig for her guidance, support and leadership during the three-week voyage through the Chagos Archipelago. Although her plate was full, she always made time to assist me. I was very impressed with her role as Research voyage leader. My thanks also go out to the crew and fellow scientists on board the Pacific Marlin for all their assistance. I was so fortunate to be a part of this unique voyage with a great group of people all wanting to achieve a common goal. It was an experience I will treasure and never forget. 2 ABSTRACT The Chagos Archipelago is a chain of islands, atolls, seamounts and shallow banks situated in the geographical centre of the tropical Indian Ocean, covering some 640,000km2. The region supports one of the healthiest marine ecosystems in the cleanest waters in the world. Investigating the oceanographic conditions within this no- take marine reserve will contribute to our global understanding of how the oceanic environment drives biodiversity in pristine tropical regions. This paper explores the first ever localised oceanography associated with shallow seamounts in the Chagos region. Over a three-week voyage, CTD casts and water samples to quantify chlorophyll-a values were conducted over high and low resolution transects throughout the archipelago to characterize vertical profiles regionally and across individual seamounts. -
Ultraphytoplankton in the Eastern
MARINE ECOLOGY PROGRESS SERIES Published December 9 Mar. Ecol. Prog. Ser. Ultraphytoplankton in the eastern Mediterranean Sea: towards deriving phytoplankton biomass from flow cytometric measurements of abundance, fluorescence and light scatter 'Biological Oceanography Division. Bedford Institute of Oceanography, Dartmouth, Nova Scotia, Canada B2Y 4A2 2~heYigal Allon Kinneret Limnological Laboratory. Israel Oceanographic and Limnological Research Ltd. PO Box 345, Tiberias 14102, Israel 3~epartmentof Biology, University of Oregon, Eugene, Oregon 97403, USA ABSTRACT: Prochlorophytes, cyanobacteria and eukaryotic ultraphytoplankton from the southern Levantine Basin of the eastern Mediterranean Sea were analyzed by flow cytometry to obtain mea- surements of cell abundance, relative cellular fluorescence and relative cellular hght scatter. Assuming that fluorescence is a proxy for chlorophyll and that light scatter is a proxy for cellular carbon, phyto- plankton biomass can be expressed as the sum (over all cell groups) of adaptive cellular characteristics (i.e. chorophyll and carbon) weighted by cell abundance. On this basis, much of the carbon appeared attributable to eukaryotic ultraphytoplankton, but chlorophyll was more evenly partitioned such that the contributions from prochlorophytes and cyanobacteria were also significant. The subsurface chlorophyll maximum coincided with the maximum in total fluorescence but not with the maxlrnum abundance of cells nor with the presumed maximum in the carbon biomass of ultraphytoplankton. KEY WORDS: -
Deep Maxima of Phytoplankton Biomass, Primary Production and Bacterial Production in the Mediterranean Sea During Late Spring” by Emilio Marañón Et Al
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-261-RC2, 2020 © Author(s) 2020. This work is distributed under the Creative Commons Attribution 4.0 License. Interactive comment on “Deep maxima of phytoplankton biomass, primary production and bacterial production in the Mediterranean Sea during late spring” by Emilio Marañón et al. Anonymous Referee #2 Received and published: 11 September 2020 This work reports that the deep chlorophyll maximum (DCM) is a maximum of biomass and primary production in the oligotrophic Mediterranean Sea during late spring. These deep maxima are accompanied by a sub-maximum of bacterial production. The ms is relevant, it reveals that primary production is very significant at the DCM, a component of production undetectable by remote sensing techniques. It is worth mentioning that the biomass data presented are quite new, since the biomass of picoplankton and es- pecially of nanoplankton, the latter seldom directly quantified, were analyzed with spe- cific and appropriate techniques. The ms is well organized and well written and is very easy to read. The figures and tables are clear and explanatory. The results may repre- sent a challenge for some current paradigms of phytoplankton ecophysiology. The main C1 factors that regulate phytoplankton growth rates are light, nutrients and temperature. The study concludes that growth rates remain more or less constant along the water column. Between the surface layers and the DCM, irradiance decreases from saturat- ing to limiting conditions and temperature decreased about 5 C in this study. These two factors alone should have significantly decreased phytoplankton growth rates at the DCM, which could have been compensated somehow by an increase of diffusive nutrient supply to the DCM from the nutricline. -
Draft Genome of Prochlorothrix Hollandica CCAP 1490/1T
Velichko et al. Standards in Genomic Sciences (2016) 11:82 DOI 10.1186/s40793-016-0204-4 SHORT GENOME REPORT Open Access Draft genome of Prochlorothrix hollandica CCAP 1490/1T (CALU1027), the chlorophyll a/b-containing filamentous cyanobacterium Natalia Velichko1*, Mikhail Rayko2*, Ekaterina Chernyaeva3, Alla Lapidus3 and Alexander Pinevich1 Abstract Prochlorothrix hollandica is filamentous non-heterocystous cyanobacterium which possesses the chlorophyll a/b light-harvesting complexes. Despite the growing interest in unusual green-pigmented cyanobacteria (prochlorophytes) to date only a few sequenced genome from prochlorophytes genera have been reported. This study sequenced the genome of Prochlorothrix hollandica CCAP 1490/1T (CALU1027). The produced draft genome assembly (5.5 Mb) contains 3737 protein-coding genes and 114 RNA genes. Keywords: Cyanobacteria, Prochlorophytes, Prochlorothrix hollandica, Comparative genomics Introduction The genus Prochlorothrix is represented by two cul- The majority of cyanobacteria use chl a as a sole magne- tivable free-living species: Prochlorothrix hollandica sium tetrapyrrole and common phycobilisome function- and Prochlorothrix scandica,aswellasanumberof ing as the bulk LHC. The prochlorophytes are a unique unculturable strains, originating from environmental pigment subgroup of phylum Cyanobacteria – besides 16S rRNA sequences [6]. The distinction between P. chl a, they contain other chls (b; 2,4-divinyl a; 2,4-divi- hollandica and P. scandica is predominantly based on nyl b; f; g) as antennal pigments and simultaneously do the molecular-genetic characters: DNA reassociation not depend on the PBP-containing photoreceptors [1]. less than 30 % and DNA GC mol% content difference Prochlorophytes demonstrating these outgroup features more than 5 % [5]. are few and encompass three marine unicellular genera P.