Cortical Evolution: Judge the Brain by Its Cover
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Suppression of DNA Double-Strand Break Formation by DNA Polymerase B in Active DNA Demethylation Is Required for Development of Hippocampal Pyramidal Neurons
9012 • The Journal of Neuroscience, November 18, 2020 • 40(47):9012–9027 Development/Plasticity/Repair Suppression of DNA Double-Strand Break Formation by DNA Polymerase b in Active DNA Demethylation Is Required for Development of Hippocampal Pyramidal Neurons Akiko Uyeda,1 Kohei Onishi,1 Teruyoshi Hirayama,1,2,3 Satoko Hattori,4 Tsuyoshi Miyakawa,4 Takeshi Yagi,1,2 Nobuhiko Yamamoto,1 and Noriyuki Sugo1 1Graduate School of Frontier Biosciences, Osaka University, Suita, Osaka 565-0871, Japan, 2AMED-CREST, Japan Agency for Medical Research and Development, Suita, Osaka 565-0871, Japan, 3Department of Anatomy and Developmental Neurobiology, Tokushima University Graduate School of Medical Sciences, Kuramoto, Tokushima 770-8503, Japan, and 4Institute for Comprehensive Medical Science, Fujita Health University, Toyoake, Aichi 470-1192, Japan Genome stability is essential for brain development and function, as de novo mutations during neuronal development cause psychiatric disorders. However, the contribution of DNA repair to genome stability in neurons remains elusive. Here, we demonstrate that the base excision repair protein DNA polymerase b (Polb) is involved in hippocampal pyramidal neuron fl/fl differentiation via a TET-mediated active DNA demethylation during early postnatal stages using Nex-Cre/Polb mice of ei- ther sex, in which forebrain postmitotic excitatory neurons lack Polb expression. Polb deficiency induced extensive DNA dou- ble-strand breaks (DSBs) in hippocampal pyramidal neurons, but not dentate gyrus granule cells, and to a lesser extent in neocortical neurons, during a period in which decreased levels of 5-methylcytosine and 5-hydroxymethylcytosine were observed in genomic DNA. Inhibition of the hydroxylation of 5-methylcytosine by expression of microRNAs miR-29a/b-1 diminished DSB formation. -
In Vivo Imaging of Microglia-Mediated Axonal Pruning and Modulation By
Combined bioRxivsingle preprintmanuscript doi: https://doi.org/10.1101/2020.06.07.087221 file ; this version posted June 8, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 In vivo imaging of microglia-mediated axonal pruning and modulation 2 by the complement system 3 Tony K.Y. Lim1 and Edward S. Ruthazer1,2,* 4 1. Department of Neurology & Neurosurgery, Montreal Neurological Institute-Hospital, McGill 5 University, Montreal, Quebec, H3A 2B4; Canada 6 2. Lead Contact 7 *Correspondence: [email protected] 8 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.06.07.087221; this version posted June 8, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 9 Summary 10 Partial phagocytosis – called trogocytosis – of axons by microglia has been documented in ex vivo 11 preparations but has yet to be observed in vivo. Fundamental questions regarding the mechanisms that 12 modulate axon trogocytosis as well as its function in neural circuit development remain unanswered. 13 Here we used 2-photon live imaging of the developing Xenopus laevis retinotectal circuit to observe 14 axon trogocytosis by microglia in vivo. Amphibian regulator of complement activation 3 (aRCA3) was 15 identified as a neuronally expressed, synapse-associated complement inhibitory molecule. 16 Overexpression of aRCA3 enhanced axonal arborization and inhibited trogocytosis, while expression of 17 VAMP2-C3, a complement-enhancing fusion protein tethered to the axon surface, reduced axonal 18 arborization. -
Microglia Control Glutamatergic Synapses in the Adult Mouse Hippocampus
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.01.429096; this version posted February 2, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Microglia control glutamatergic synapses in the adult mouse hippocampus Short title: Microglia and glutamatergic synapses Bernadette Basilico1†*‡, Laura Ferrucci1‡, Patrizia Ratano2‡, Maria T. Golia1, Alfonso Grimaldi3, Maria Rosito3, Valentina Ferretti4, Ingrid Reverte1,5, Maria C. Marrone6, Maria Giubettini3,7, Valeria De Turris3, Debora Salerno3, Stefano Garofalo1, Marie-Kim St-Pierre8, Micael Carrier8, Massimiliano Renzi1, Francesca Pagani3, Marcello Raspa9, Ferdinando Scavizzi9, Cornelius T. Gross10, Silvia Marinelli5, Marie E. Tremblay8,11, Daniele Caprioli1,5, Laura Maggi1, Cristina Limatola1,2, Silvia Di Angelantonio1,3§, Davide Ragozzino1,5*§ 1Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy. 2IRCCS Neuromed, Via Atinese 18, 86077, Pozzilli, IS, Italy. 3Center for Life Nanoscience, Istituto Italiano di Tecnologia, Rome, Italy. 4Dipartimento di Biologia e Biotecnologie "Charles Darwin", Sapienza University of Rome, Rome, Italy. 5Santa Lucia Foundation (IRCCS Fondazione Santa Lucia), Rome, Italy. 6European Brain Research Institute-Rita Levi Montalcini, Rome, Italy. 7CrestOptics S.p.A., Via di Torre Rossa 66, 00165 Rome, Italy. 8Centre de Recherche du CHU de Québec, Axe Neurosciences Québec, QC, Canada; Département de médecine moléculaire, Université Laval Québec, QC, Canada. 9National Research Council, Institute of Biochemistry and Cell Biology (CNR- IBBC/EMMA/Infrafrontier/IMPC), International Campus “A. Buzzati-Traverso”, Monterotondo (Rome) Italy. -
Neuroglial Response to Neuron Injury. a Study Using Intraneural Injection of Ricinus Communis Agglutinin-60
J. Anat. (1989), 164, pp. 201-213 201 With 16 figures Printed in Great Britain Neuroglial response to neuron injury. A study using intraneural injection of ricinus communis agglutinin-60 E. A. LING, C. Y. WEN*, J. Y. SHIEH*, T. Y. YICK AND S. K. LEONG Department of Anatomy, Faculty of Medicine, National University of Singapore, Singapore 0511 and * Department of Anatomy, College of Medicine, National Taiwan University, Taipei, Taiwan 10018 (Accepted 27 September 1988) INTRODUCTION Several studies have shown that ricinus communis agglutinin (RCA), when injected into a nerve in minute amounts, is retrogradely transported by axons in the nerve, resulting in a selective destruction of the parental cell bodies. Thus, the administration of RCA into the vagus nerve would cause a selective destruction of the efferent neurons in the dorsal motor nucleus (Wiley, Blessing & Reis, 1982; Ling & Leong, 1987, 1988). Such a 'suicide transport' of the toxic lectin is also evident in sensory neurons (Yamamoto, Iwasaki & Konno, 1983, 1984; Johnson, Westrum, Henry & Canfield, 1985; Wiley & Oeltmann, 1986). Recently, the use of RCA has become increasingly important as a research tool for tracing the central projections of primary afferents of peripheral nerves (Yamamoto et al. 1983; Leong & Tan, 1987; Ling & Leong, 1987). While much is known about the consequent death of neurons following RCA application, little is known about the response of the non-neuronal cells either closely associated with, or in the vicinity of, the degenerating neurons. According to Yamamoto et al. (1984), the selective destruction of neurons in the trigeminal and dorsal root ganglia by RCA could possibly stimulate the capsule cells involved in the phagocytosis of the degenerating nerve cells. -
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NERVOUS SYSTEM هذا الملف لالستزادة واثراء المعلومات Neuropsychiatry Block
NERVOUS SYSTEM هذا الملف لﻻستزادة واثراء المعلومات Neuropsychiatry block. قال تعالى: ) َو َل َق د َخ َل قنَا ا ِْلن َسا َن ِمن ُس ََل َل ة ِ من ِطي ن }12{ ثُ م َجعَ لنَاه ُ نُ ط َفة فِي َق َرا ر م ِكي ن }13{ ثُ م َخ َل قنَا ال ُّن ط َفة َ َع َل َقة َف َخ َل قنَا ا لعَ َل َقة َ ُم ضغَة َف َخ َل قنَا ا ل ُم ضغَة َ ِع َظا ما َف َك َس ونَا ا ل ِع َظا َم َل ح ما ثُ م أَن َشأنَاه ُ َخ ل قا آ َخ َر َفتَبَا َر َك ّللا ُ أَ ح َس ُن ا ل َخا ِل ِقي َن }14{( Resources BRS Embryology Book. Pathoma Book ( IN DEVELOPMENTAL ANOMALIES PART ). [email protected] 1 OVERVIEW A- Central nervous system (CNS) is formed in week 3 of development, during which time the neural plate develops. The neural plate, consisting of neuroectoderm, becomes the neural tube, which gives rise to the brain and spinal cord. B- Peripheral nervous system (PNS) is derived from three sources: 1. Neural crest cells 2. Neural tube, which gives rise to all preganglionic autonomic nerves (sympathetic and parasympathetic) and all nerves (-motoneurons and -motoneurons) that innervate skeletal muscles 3. Mesoderm, which gives rise to the dura mater and to connective tissue investments of peripheral nerve fibers (endoneurium, perineurium, and epineurium) DEVELOPMENT OF THE NEURAL TUBE Neurulation refers to the formation and closure of the neural tube. BMP-4 (bone morphogenetic protein), noggin (an inductor protein), chordin (an inductor protein), FGF-8 (fibroblast growth factor), and N-CAM (neural cell adhesion molecule) appear to play a role in neurulation. -
The Functional Organization of Descending Sensory-Motor 2 Pathways in Drosophila 3 4 5 Shigehiro Namiki,1 Michael H
bioRxiv preprint doi: https://doi.org/10.1101/231696; this version posted December 11, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 The functional organization of descending sensory-motor 2 pathways in Drosophila 3 4 5 Shigehiro Namiki,1 Michael H. Dickinson,2 Allan M. Wong,1 Wyatt Korff,1 Gwyneth M. 6 Card,1,* 7 8 1Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA 9 2Division of Biology and Bioengineering, California Institute of Technology, Pasadena, CA 91125, USA 10 11 12 This manuscript includes 55 pages of typescript, 15 figures, 0 tables, 24 supplemental figures, and 6 13 supplementary tables. 14 15 KEYWORDS: command neuron; descending neuron; motor control; neuron database; ventral 16 nervous system 17 18 *Correspondence should be addressed to [email protected] (G.M.C) 19 1 bioRxiv preprint doi: https://doi.org/10.1101/231696; this version posted December 11, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 20 SUMMARY 21 22 In most animals, the brain controls the body via a set of descending neurons (DNs) that traverse the neck 23 and terminate in post-cranial regions of the nervous system. This critical neural population is thought to 24 activate, maintain and modulate locomotion and other behaviors. Although individual members of this 25 cell class have been well-studied across species ranging from insects to primates, little is known about the 26 overall connectivity pattern of DNs as a population. -
Anatomically Distinct Patterns of Diffusion MRI Coherence
NeuroImage 79 (2013) 412–422 Contents lists available at SciVerse ScienceDirect NeuroImage journal homepage: www.elsevier.com/locate/ynimg Radial and tangential neuronal migration pathways in the human fetal brain: Anatomically distinct patterns of diffusion MRI coherence James Kolasinski a,c,1, Emi Takahashi a,b,⁎,1, Allison A. Stevens a, Thomas Benner a, Bruce Fischl a, Lilla Zöllei a,b,2, P. Ellen Grant a,b,2 a Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School, Charlestown, MA 02119, USA b Division of Newborn Medicine, Department of Medicine/Fetal–Neonatal Neuroimaging and Developmental Science Center, Children's Hospital Boston, Harvard Medical School, Boston, MA 02115, USA c Centre for Functional Magnetic Resonance Imaging of the Brain (FMRIB), Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK article info abstract Article history: Corticogenesis is underpinned by a complex process of subcortical neuroproliferation, followed by highly orches- Accepted 29 April 2013 trated cellular migration. A greater appreciation of the processes involved in human fetal corticogenesis is vital to Available online 11 May 2013 gaining an understanding of how developmental disturbances originating in gestation could establish a variety of complex neuropathology manifesting in childhood, or even in adult life. Magnetic resonance imaging modalities offer a unique insight into anatomical structure, and increasingly infer information regarding underlying microstructure in the human brain. In this study we applied a combination of high-resolution structural and diffusion-weighted magnetic resonance imaging to a unique cohort of three post-mortem fetal brain specimens, aged between 19 and 22 post-conceptual weeks. -
Structural and Developmental Principles of Neuropil Assembly in C
Article Structural and developmental principles of neuropil assembly in C. elegans https://doi.org/10.1038/s41586-020-03169-5 Mark W. Moyle1, Kristopher M. Barnes2, Manik Kuchroo3, Alex Gonopolskiy3, Leighton H. Duncan1, Titas Sengupta1, Lin Shao1, Min Guo4, Anthony Santella2, Received: 21 April 2020 Ryan Christensen4, Abhishek Kumar5, Yicong Wu4, Kevin R. Moon6, Guy Wolf7, Accepted: 12 November 2020 Smita Krishnaswamy3,10, Zhirong Bao2,10, Hari Shroff4,5,10, William A. Mohler8,10 & Daniel A. Colón-Ramos1,5,9,10 ✉ Published online: xx xx xxxx Check for updates Neuropil is a fundamental form of tissue organization within the brain1, in which densely packed neurons synaptically interconnect into precise circuit architecture2,3. However, the structural and developmental principles that govern this nanoscale precision remain largely unknown4,5. Here we use an iterative data coarse-graining algorithm termed ‘difusion condensation’6 to identify nested circuit structures within the Caenorhabditis elegans neuropil, which is known as the nerve ring. We show that the nerve ring neuropil is largely organized into four strata that are composed of related behavioural circuits. The stratifed architecture of the neuropil is a geometrical representation of the functional segregation of sensory information and motor outputs, with specifc sensory organs and muscle quadrants mapping onto particular neuropil strata. We identify groups of neurons with unique morphologies that integrate information across strata and that create neural structures that cage the strata within the nerve ring. We use high resolution light-sheet microscopy7,8 coupled with lineage-tracing and cell-tracking algorithms9,10 to resolve the developmental sequence and reveal principles of cell position, migration and outgrowth that guide stratifed neuropil organization. -
Heterogeneity in Ventricular Zone Neural Precursors Contributes to Neuronal Fate Diversity in the Postnatal Neocortex
7028 • The Journal of Neuroscience, May 19, 2010 • 30(20):7028–7036 Development/Plasticity/Repair Heterogeneity in Ventricular Zone Neural Precursors Contributes to Neuronal Fate Diversity in the Postnatal Neocortex Elizabeth K. Stancik,1 Ivan Navarro-Quiroga,1 Robert Sellke,2 and Tarik F. Haydar1 1Center for Neuroscience Research, Children’s National Medical Center, Washington, DC 20010, and 2University of Maryland School of Medicine, Baltimore, Maryland 21201 The recent discovery of short neural precursors (SNPs) in the murine neocortical ventricular zone (VZ) challenges the widely held view that radial glial cells (RGCs) are the sole occupants of this germinal compartment and suggests that precursor variety is an important factor of brain development. Here, we use in utero electroporation and genetic fate mapping to show that SNPs and RGCs cohabit the VZ but display different cell cycle kinetics and generate phenotypically different progeny. In addition, we find that RGC progeny undergo additional rounds of cell division as intermediate progenitor cells (IPCs), whereas SNP progeny generally produce postmitotic neurons directly from the VZ. By clearly defining SNPs as bona fide VZ residents, separate from both RGCs and IPCs, and uncovering their unique proliferativeandlineageproperties,theseresultsdemonstratehowindividualneuralprecursorgroupsintheembryonicrodentVZcreate diversity in the overlying neocortex. Introduction progenitors properly form the cerebral cortex as well as for elu- The ventricular zone (VZ) of the dorsal telencephalon contains cidating possible mechanisms of species-specific diversity. the progenitor cells that produce all of the various excitatory In addition to the neural precursors in the VZ, a separate class neurons of the mature neocortex. This process occurs during of neuronal progenitors has been described in the overlying sub- prenatal mammalian brain development through a precisely reg- ventricular zone (SVZ). -
Detailed Field Pattern Is Intrinsic to the Embryonic Mouse Hippocampus Early in Neurogenesis
The Journal of Neuroscience, March 1, 2001, 21(5):1580–1589 Detailed Field Pattern Is Intrinsic to the Embryonic Mouse Hippocampus Early in Neurogenesis Shubha Tole and Elizabeth A. Grove Department of Neurobiology, Pharmacology and Physiology, Committees on Developmental Biology and Neurobiology, University of Chicago, Chicago, Illinois 60637 There is accumulating evidence that the mammalian cerebral ble sources of patterning signals intrinsic to the explants were cortex is regionally specified early in neurogenesis. However, evaluated by removing the cortical hem or presumptive extra- the degree and scale of the regional pattern that is intrinsic to hippocampal cortex from the explants. To expose cells to dif- different parts of the cortical primordium remains unclear. Here, ferent local positional cues, explant fragments were grafted into we show that detailed patterning—the accurate positioning of ectopic positions in a larger explant. None of these manipula- several areas or fields—is intrinsic to the part of the primordium tions altered the development of patterned, field-specific gene that generates the hippocampus. A caudomedial portion of the expression. Finally, explants harvested at E10.5 also upregulate cortical primordium, the site from which the hippocampus field-specific gene expression, although less robustly. Some arises, was isolated from potential extrinsic patterning cues by hippocampal patterning information is therefore intrinsic to the maintaining it in explant culture. Explants were prepared at caudomedial cortical primordium at the time that the first hip- embryonic day (E) 12.5, which is early in hippocampal neuro- pocampal neurons are born at E10.5. By E12.5, hippocampal genesis in the mouse and 3 d before individual fields are seen field patterning appears to be well established and resistant to by differential gene expression. -
Development and Evolution of the Human Neocortex
Leading Edge Review Development and Evolution of the Human Neocortex Jan H. Lui,1,2,3 David V. Hansen,1,2,4 and Arnold R. Kriegstein1,2,* 1Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco, 35 Medical Center Way, San Francisco, CA 94143, USA 2Department of Neurology 3Biomedical Sciences Graduate Program University of California, San Francisco, 513 Parnassus Avenue, San Francisco, CA 94143, USA 4Present address: Department of Neuroscience, Genentech, Inc., 1 DNA Way, MS 230B, South San Francisco, CA 94080, USA *Correspondence: [email protected] DOI 10.1016/j.cell.2011.06.030 The size and surface area of the mammalian brain are thought to be critical determinants of intel- lectual ability. Recent studies show that development of the gyrated human neocortex involves a lineage of neural stem and transit-amplifying cells that forms the outer subventricular zone (OSVZ), a proliferative region outside the ventricular epithelium. We discuss how proliferation of cells within the OSVZ expands the neocortex by increasing neuron number and modifying the trajectory of migrating neurons. Relating these features to other mammalian species and known molecular regulators of the mouse neocortex suggests how this developmental process could have emerged in evolution. Introduction marsupials begin to reveal how differences in neural progenitor Evolution of the neocortex in mammals is considered to be a key cell populations can result in neocortices of variable size and advance that enabled higher cognitive function. However, neo- shape. Increases in neocortical volume and surface area, partic- cortices of different mammalian species vary widely in shape, ularly in the human, are related to the expansion of progenitor size, and neuron number (reviewed by Herculano-Houzel, 2009).