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St Kilda Lichen Survey April 2014
A REPORT TO NATIONAL TRUST FOR SCOTLAND St Kilda Lichen Survey April 2014 Andy Acton, Brian Coppins, John Douglass & Steve Price Looking down to Village Bay, St. Kilda from Glacan Conachair Andy Acton [email protected] Brian Coppins [email protected] St. Kilda Lichen Survey Andy Acton, Brian Coppins, John Douglass, Steve Price Table of Contents 1 INTRODUCTION ............................................................................................................ 3 1.1 Background............................................................................................................. 3 1.2 Study areas............................................................................................................. 4 2 METHODOLOGY ........................................................................................................... 6 2.1 Field survey ............................................................................................................ 6 2.2 Data collation, laboratory work ................................................................................ 6 2.3 Ecological importance ............................................................................................. 7 2.4 Constraints ............................................................................................................. 7 3 RESULTS SUMMARY ................................................................................................... 8 4 MARITIME GRASSLAND (INCLUDING SWARDS DOMINATED BY PLANTAGO MARITIMA AND ARMERIA -
Pannariaceae Generic Taxonomy LL Ver. 27.9.2013.Docx
http://www.diva-portal.org Preprint This is the submitted version of a paper published in The Lichenologist. Citation for the original published paper (version of record): Ekman, S. (2014) Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota). The Lichenologist, 46: 627-656 http://dx.doi.org/10.1017/S002428291400019X Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-943 Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota) Stefan EKMAN, Mats WEDIN, Louise LINDBLOM & Per M. JØRGENSEN S. Ekman (corresponding author): Museum of Evolution, Uppsala University, Norbyvägen 16, SE –75236 Uppsala, Sweden. Email: [email protected] M. Wedin: Dept. of Botany, Swedish Museum of Natural History, Box 50007, SE –10405 Stockholm, Sweden. L. Lindblom and P. M. Jørgensen: Dept. of Natural History, University Museum of Bergen, Box 7800, NO –5020 Bergen, Norway. Abstract: We estimated phylogeny in the lichen-forming ascomycete family Pannariaceae. We specifically modelled spatial (across-site) heterogeneity in nucleotide frequencies, as models not incorporating this heterogeneity were found to be inadequate for our data. Model adequacy was measured here as the ability of the model to reconstruct nucleotide diversity per site in the original sequence data. A potential non-orthologue in the internal transcribed spacer region (ITS) of Degelia plumbea was observed. We propose a revised generic classification for the Pannariaceae, accepting 30 genera, based on our phylogeny, previously published phylogenies, as well as morphological and chemical data available. -
Revisions of British and Irish Lichens
Revisions of British and Irish Lichens Volume 9 February 2021 Peltigerales: Pannariaceae Cover image: Pectenia atlantica, on bark of Fraxinus excelsior, Strath Croe, Kintail, Wester Ross. Revisions of British and Irish Lichens is a free-to-access serial publication under the auspices of the British Lichen Society, that charts changes in our understanding of the lichens and lichenicolous fungi of Great Britain and Ireland. Each volume will be devoted to a particular family (or group of families), and will include descriptions, keys, habitat and distribution data for all the species included. The maps are based on information from the BLS Lichen Database, that also includes data from the historical Mapping Scheme and the Lichen Ireland database. The choice of subject for each volume will depend on the extent of changes in classification for the families concerned, and the number of newly recognized species since previous treatments. To date, accounts of lichens from our region have been published in book form. However, the time taken to compile new printed editions of the entire lichen biota of Britain and Ireland is extensive, and many parts are out-of-date even as they are published. Issuing updates as a serial electronic publication means that important changes in understanding of our lichens can be made available with a shorter delay. The accounts may also be compiled at intervals into complete printed accounts, as new editions of the Lichens of Great Britain and Ireland. Editorial Board Dr P.F. Cannon (Department of Taxonomy & Biodiversity, Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK). Dr A. Aptroot (Laboratório de Botânica/Liquenologia, Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Avenida Costa e Silva s/n, Bairro Universitário, CEP 79070-900, Campo Grande, MS, Brazil) Dr B.J. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Exploring the Diversity and Traits of Lichen Propagules Across the United States Erin A
Journal of Biogeography (J. Biogeogr.) (2016) 43, 1667–1678 ORIGINAL Biodiversity gradients in obligate ARTICLE symbiotic organisms: exploring the diversity and traits of lichen propagules across the United States Erin A. Tripp1,2,*, James C. Lendemer3, Albert Barberan4, Robert R. Dunn5,6 and Noah Fierer1,4 1Department of Ecology and Evolutionary ABSTRACT Biology, University of Colorado, Boulder, CO Aim Large-scale distributions of plants and animals have been studied exten- 80309, USA, 2Museum of Natural History, sively and form the foundation for core concepts and paradigms in biogeogra- University of Colorado, Boulder, CO 80309, USA, 3The New York Botanical Garden, Bronx, phy and macroecology. Much less attention has been given to other groups of NY 10458-5126, USA, 4Cooperative Institute organisms, particularly obligate symbiotic organisms. We present the first for Research in Environmental Sciences, quantitative assessment of how spatial and environmental variables shape the University of Colorado, Boulder, CO 80309, abundance and distribution of obligate symbiotic organisms across nearly an USA, 5Department of Applied Ecology, North entire subcontinent, using lichen propagules as an example. Carolina State University, Raleigh, NC 27695, Location The contiguous United States (excluding Alaska and Hawaii). USA, 6Center for Macroecology, Evolution and Climate, Natural History Museum of Methods We use DNA sequence-based analyses of lichen reproductive Denmark, University of Copenhagen, propagules from settled dust samples collected from nearly 1300 home exteri- Universitetsparken 15, DK-2100 Copenhagen Ø, ors to reconstruct biogeographical correlates of lichen taxonomic and func- Denmark tional diversity. Results Contrary to expectations, we found a weak but significant reverse lati- tudinal gradient in lichen propagule diversity. -
Lichens and Allied Fungi of the Indiana Forest Alliance
2017. Proceedings of the Indiana Academy of Science 126(2):129–152 LICHENS AND ALLIED FUNGI OF THE INDIANA FOREST ALLIANCE ECOBLITZ AREA, BROWN AND MONROE COUNTIES, INDIANA INCORPORATED INTO A REVISED CHECKLIST FOR THE STATE OF INDIANA James C. Lendemer: Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY 10458-5126 USA ABSTRACT. Based upon voucher collections, 108 lichen species are reported from the Indiana Forest Alliance Ecoblitz area, a 900 acre unit in Morgan-Monroe and Yellowwood State Forests, Brown and Monroe Counties, Indiana. The lichen biota of the study area was characterized as: i) dominated by species with green coccoid photobionts (80% of taxa); ii) comprised of 49% species that reproduce primarily with lichenized diaspores vs. 44% that reproduce primarily through sexual ascospores; iii) comprised of 65% crustose taxa, 29% foliose taxa, and 6% fruticose taxa; iv) one wherein many species are rare (e.g., 55% of species were collected fewer than three times) and fruticose lichens other than Cladonia were entirely absent; and v) one wherein cyanolichens were poorly represented, comprising only three species. Taxonomic diversity ranged from 21 to 56 species per site, with the lowest diversity sites concentrated in riparian corridors and the highest diversity sites on ridges. Low Gap Nature Preserve, located within the study area, was found to have comparable species richness to areas outside the nature preserve, although many species rare in the study area were found only outside preserve boundaries. Sets of rare species are delimited and discussed, as are observations as to the overall low abundance of lichens on corticolous substrates and the presence of many unhealthy foliose lichens on mature tree boles. -
A List of the Terrestrial Fungi, Flora and Fauna of Madeira and Selvagens Archipelagos
Listagem dos fungos, flora e fauna terrestres dos arquipélagos da Madeira e Selvagens A list of the terrestrial fungi, flora and fauna of Madeira and Selvagens archipelagos Coordenadores | Coordinators Paulo A. V. Borges, Cristina Abreu, António M. Franquinho Aguiar, Palmira Carvalho, Roberto Jardim, Ireneia Melo, Paulo Oliveira, Cecília Sérgio, Artur R. M. Serrano e Paulo Vieira Composição da capa e da obra | Front and text graphic design DPI Cromotipo – Oficina de Artes Gráficas, Rua Alexandre Braga, 21B, 1150-002 Lisboa www.dpicromotipo.pt Fotos | Photos A. Franquinho Aguiar; Dinarte Teixeira João Paulo Mendes; Olga Baeta (Jardim Botânico da Madeira) Impressão | Printing Tipografia Peres, Rua das Fontaínhas, Lote 2 Vendas Nova, 2700-391 Amadora. Distribuição | Distribution Secretaria Regional do Ambiente e dos Recursos Naturais do Governo Regional da Madeira, Rua Dr. Pestana Júnior, n.º 6 – 3.º Direito. 9054-558 Funchal – Madeira. ISBN: 978-989-95790-0-2 Depósito Legal: 276512/08 2 INICIATIVA COMUNITÁRIA INTERREG III B 2000-2006 ESPAÇO AÇORES – MADEIRA - CANÁRIAS PROJECTO: COOPERACIÓN Y SINERGIAS PARA EL DESARROLLO DE LA RED NATURA 2000 Y LA PRESERVACIÓN DE LA BIODIVERSIDAD DE LA REGIÓN MACARONÉSICA BIONATURA Instituição coordenadora: Dirección General de Política Ambiental del Gobierno de Canarias Listagem dos fungos, flora e fauna terrestres dos arquipélagos da Madeira e Selvagens A list of the terrestrial fungi, flora and fauna of Madeira and Selvagens archipelagos COORDENADO POR | COORDINATED BY PAULO A. V. BORGES, CRISTINA ABREU, -
British Lichen Society Bulletin No
1 BRITISH LICHEN SOCIETY OFFICERS AND CONTACTS 2010 PRESIDENT S.D. Ward, 14 Green Road, Ballyvaghan, Co. Clare, Ireland, email [email protected]. VICE-PRESIDENT B.P. Hilton, Beauregard, 5 Alscott Gardens, Alverdiscott, Barnstaple, Devon EX31 3QJ; e-mail [email protected] SECRETARY C. Ellis, Royal Botanic Garden, 20A Inverleith Row, Edinburgh EH3 5LR; email [email protected] TREASURER J.F. Skinner, 28 Parkanaur Avenue, Southend-on-Sea, Essex SS1 3HY, email [email protected] ASSISTANT TREASURER AND MEMBERSHIP SECRETARY H. Döring, Mycology Section, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] REGIONAL TREASURER (Americas) J.W. Hinds, 254 Forest Avenue, Orono, Maine 04473-3202, USA; email [email protected]. CHAIR OF THE DATA COMMITTEE D.J. Hill, Yew Tree Cottage, Yew Tree Lane, Compton Martin, Bristol BS40 6JS, email [email protected] MAPPING RECORDER AND ARCHIVIST M.R.D. Seaward, Department of Archaeological, Geographical & Environmental Sciences, University of Bradford, West Yorkshire BD7 1DP, email [email protected] DATA MANAGER J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SENIOR EDITOR (LICHENOLOGIST) P.D. Crittenden, School of Life Science, The University, Nottingham NG7 2RD, email [email protected] BULLETIN EDITOR P.F. Cannon, CABI and Royal Botanic Gardens Kew; postal address Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] CHAIR OF CONSERVATION COMMITTEE & CONSERVATION OFFICER B.W. Edwards, DERC, Library Headquarters, Colliton Park, Dorchester, Dorset DT1 1XJ, email [email protected] CHAIR OF THE EDUCATION AND PROMOTION COMMITTEE: position currently vacant. -
Aktuelle Daten Zu Den Flechtenbiota in Rheinland-Pfalz Und Im Saarland
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Fauna und Flora in Rheinland-Pfalz Jahr/Year: 2015-2016 Band/Volume: 13 Autor(en)/Author(s): John Volker Artikel/Article: Aktuelle Daten zu den Flechtenbiota in Rheinland- Pfalz und im Saarland. IV. Die Familie Collemataceae 1123-1150 Aktuelle Daten zu den Flechtenbiota in Rheinland-Pfalz und im Saarland. IV. Die Familie Collemataceae von Volker John Inhaltsübersicht Zusammenfassung Summary 1 Einleitung 2 Untersuchungsgebiet 3 Material und Methode 4 Merkmale der Gattungen und Arten 5 Kommentierte Liste der Arten 5.1 Blennothallia Trevis . 5.2 Callóme Otálora & Wedin 5.3 Collema F.H.Wigg. 5.4 Enchylium (Ach .) Gray 5.5 Lathagrium (Ach .) Gray 5.6 Leptogium (Ach .) Gray 5.7 Scytinium (Ach .) Gray 6 Diskussion 7 Dank 8 Literatur Zusammenfassung Die aktuell bekannte Verbreitung von 30 Arten aus sieben Gattungen der ehemaligen Genera Collema und Leptogium (Collemataceae) in den Bundesländern Rheinland- Pfalz und Saarland ist in Rasterkarten auf Messtischblatt-Basis (TK 25) dargestellt. Die Bedeutung der Arten als Bioindikatoren wird kurz diskutiert. Summary Recent data on the liehen biota in Rheinland-Pfalz and Saarland. IV. The family Collemataceae The currently known distribution of 30 species from seven genera of the former ge nera Collema and Leptogium (Collemataceae) in the German federal countries Rhein land-Pfalz and Saarland is presented in grid-maps on the basis of 1:25,000 sheet. The importance of the species as bioindicators is briefly discussed. 1 Einleitung Die Familie Collemataceae zählt aktuell zehn Gattungen (Lücking , Hodkinson & Leavitt 2016), von denen sieben im Gebiet Vorkommen. -
Revisions of British and Irish Lichens
Revisions of British and Irish Lichens Volume 6 January 2021 Pertusariales: Pertusariaceae Cover image: Pertusaria pertusa, on bark of Acer pseudoplatanus, near Pitlochry, E Perthshire. Revisions of British and Irish Lichens is a free-to-access serial publication under the auspices of the British Lichen Society, that charts changes in our understanding of the lichens and lichenicolous fungi of Great Britain and Ireland. Each volume will be devoted to a particular family (or group of families), and will include descriptions, keys, habitat and distribution data for all the species included. The maps are based on information from the BLS Lichen Database, that also includes data from the historical Mapping Scheme and the Lichen Ireland database. The choice of subject for each volume will depend on the extent of changes in classification for the families concerned, and the number of newly recognized species since previous treatments. To date, accounts of lichens from our region have been published in book form. However, the time taken to compile new printed editions of the entire lichen biota of Britain and Ireland is extensive, and many parts are out-of-date even as they are published. Issuing updates as a serial electronic publication means that important changes in understanding of our lichens can be made available with a shorter delay. The accounts may also be compiled at intervals into complete printed accounts, as new editions of the Lichens of Great Britain and Ireland. Editorial Board Dr P.F. Cannon (Department of Taxonomy & Biodiversity, Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK). Dr A. Aptroot (Laboratório de Botânica/Liquenologia, Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Avenida Costa e Silva s/n, Bairro Universitário, CEP 79070-900, Campo Grande, MS, Brazil) Dr B.J. -
Extended Phylogeny and a Revised Generic Classification of The
The Lichenologist 46(5): 627–656 (2014) 6 British Lichen Society, 2014 doi:10.1017/S002428291400019X Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota) Stefan EKMAN, Mats WEDIN, Louise LINDBLOM and Per M. JØRGENSEN Abstract: We estimated phylogeny in the lichen-forming ascomycete family Pannariaceae. We specif- ically modelled spatial (across-site) heterogeneity in nucleotide frequencies, as models not incorpo- rating this heterogeneity were found to be inadequate for our data. Model adequacy was measured here as the ability of the model to reconstruct nucleotide diversity per site in the original sequence data. A potential non-orthologue in the internal transcribed spacer region (ITS) of Degelia plumbea was observed. We propose a revised generic classification for the Pannariaceae, accepting 30 genera, based on our phylogeny, previously published phylogenies, as well as available morphological and chemical data. Four genera are established as new: Austroparmeliella (for the ‘Parmeliella’ lacerata group), Nebularia (for the ‘Parmeliella’ incrassata group), Nevesia (for ‘Fuscopannaria’ sampaiana), and Pectenia (for the ‘Degelia’ plumbea group). Two genera are reduced to synonymy, Moelleropsis (included in Fuscopannaria) and Santessoniella (non-monophyletic; type included in Psoroma). Lepido- collema, described as monotypic, is expanded to include 23 species, most of which have been treated in the ‘Parmeliella’ mariana group. Homothecium and Leightoniella, previously treated in the Collemataceae, are here referred to the Pannariaceae. We propose 41 new species-level combinations in the newly described and re-circumscribed genera mentioned above, as well as in Leciophysma and Psoroma. Key words: Collemataceae, lichen taxonomy, model adequacy, model selection Accepted for publication 13 March 2014 Introduction which include c. -
Corrections, Notes and Observations on LGBI2
Corrections to the Flora: Part 2 Last revised 4th April 2017 A list of ‘Corrections’ was started soon after the publication of the 2009 Flora. By 2015 a considerable list of typographic errors, suggested additions to the text and simple corrections based on published information had been compiled. These are in black text. Additions to this list from 2016 onwards are in blue text. Members of the British Lichen Society also started to report instances where their own taxonomic and ecological observations differed from the Flora account. These notes are added in purple text; these are of considerable interest and importance but often rely on unpublished observations. The purple text should be considered as provisional, speculative and/or providing discussion of ways that a future version of the Flora might be improved. Nomenclature is as used in the Flora. Species added to the British list since the publication of the Flora are not mentioned. Updating taxonomy is a separate project. For a few species notes on changes in distribution have been added but this does not represent a comprehensive update of distributional information. Inconsistencies that run through the ‘Flora’ (TLGB&I). There are various inconsistencies in nomenclature which appear to have arisen due to the different sources and the different authors for the various generic accounts. Thallus: Sources on the internet suggest that ‘thallus’ is the term given to undifferentiated vegetative tissue in diverse groups which were previously known as thallophytes (including algae, fungi and others). In TLGB&I the term thallus appears to have been used inconsistently, sometimes to imply lichenization and elsewhere in the wider sense to describe the presence of vegetative hyphae.