NLRP3 Inflammasome at the Interface of Inflammation, Endothelial
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A Heterozygous Variant in the Human Cardiac Mir-133 Gene, MIR133A2, Alters Mirna Duplex Processing and Strand Abundance
Ohanian et al. BMC Genetics 2013, 14:18 http://www.biomedcentral.com/1471-2156/14/18 RESEARCH ARTICLE Open Access A heterozygous variant in the human cardiac miR-133 gene, MIR133A2, alters miRNA duplex processing and strand abundance Monique Ohanian1†, David T Humphreys2,3†, Elizabeth Anderson4, Thomas Preiss5 and Diane Fatkin1,2,3,6* Abstract Background: MicroRNAs (miRNAs) are small non-coding RNAs that post-transcriptionally regulate gene expression. Sequential cleavage of miRNA precursors results in a ~22 nucleotide duplex of which one strand, the mature miRNA, is typically loaded into the RNA-induced silencing complex (RISC) while the passenger strand is degraded. Very little is known about how genetic variation might affect miRNA biogenesis and function. Results: We re-sequenced the MIR1-1, MIR1-2, MIR133A1, MIR133A2, and MIR133B genes, that encode the cardiac- enriched miRNAs, miR-1 and miR-133, in 120 individuals with familial atrial fibrillation and identified 10 variants, including a novel 79T > C MIR133A2 substitution. This variant lies within the duplex at the 30 end of the mature strand, miR-133a-3p, and is predicted to prevent base-pairing and weaken thermostability at this site, favoring incorporation of the passenger strand, miR-133a-5p, into RISC. Genomic DNA fragments containing miR-133a-2 precursor sequences with 79T and 79C alleles were transfected into HeLa cells. On Northern blotting the 79T allele showed strong expression of miR-133a-3p with weak expression of miR-133a-5p. In contrast, the 79C allele had no effect on miR-133a-3p but there was a significant increase (mean 3.6-fold) in miR-133a-5p levels. -
Inflammasome Activation-Induced Hypercoagulopathy
cells Review Inflammasome Activation-Induced Hypercoagulopathy: Impact on Cardiovascular Dysfunction Triggered in COVID-19 Patients Lealem Gedefaw, Sami Ullah, Polly H. M. Leung , Yin Cai, Shea-Ping Yip * and Chien-Ling Huang * Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Kowloon, Hong Kong, China; [email protected] (L.G.); [email protected] (S.U.); [email protected] (P.H.M.L.); [email protected] (Y.C.) * Correspondence: [email protected] (S.-P.Y.); [email protected] (C.-L.H.) Abstract: Coronavirus disease 2019 (COVID-19) is the most devastating infectious disease in the 21st century with more than 2 million lives lost in less than a year. The activation of inflammasome in the host infected by SARS-CoV-2 is highly related to cytokine storm and hypercoagulopathy, which significantly contribute to the poor prognosis of COVID-19 patients. Even though many studies have shown the host defense mechanism induced by inflammasome against various viral infections, mechanistic interactions leading to downstream cellular responses and pathogenesis in COVID-19 remain unclear. The SARS-CoV-2 infection has been associated with numerous cardiovascular disor- ders including acute myocardial injury, myocarditis, arrhythmias, and venous thromboembolism. The inflammatory response triggered by the activation of NLRP3 inflammasome under certain car- diovascular conditions resulted in hyperinflammation or the modulation of angiotensin-converting enzyme 2 signaling pathways. Perturbations of several target cells and tissues have been described in inflammasome activation, including pneumocytes, macrophages, endothelial cells, and dendritic cells. Citation: Gedefaw, L.; Ullah, S.; Leung, P.H.M.; Cai, Y.; Yip, S.-P.; The interplay between inflammasome activation and hypercoagulopathy in COVID-19 patients is an Huang, C.-L. -
Inflammasome Function in Neutrophils Kaiwen Chen Bachelor of Science (Honours Class I)
Inflammasome function in neutrophils Kaiwen Chen Bachelor of Science (Honours Class I) A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2015 Institute for Molecular Bioscience i ii Abstract The innate immune system protects against infection but also drives inflammatory disorders. Key molecular drivers of both processes are ‘inflammasomes’, multi-protein complexes that assemble in the cytosol to activate the protease, caspase-1. Active caspase-1 cleaves specific proinflammatory cytokines [e.g. interleukin (IL)-1β] into their mature, secreted forms, and initiates a form of inflammatory cell lysis called pyroptosis. Inflammasomes are assembled by select pattern recognition receptors such as NLRC4, NLRP3, AIM2, or via a non-canonical pathway involving caspase-11. Whilst inflammasomes functions have been intensely researched, the cell types mediating inflammasome signalling in distinct in vivo settings were unclear. Neutrophils are one of the first cells to arrive to a site of infection or injury, and thus have the opportunity to detect inflammasome-activating molecules in vivo, but their ability to signal by inflammasome pathways had not been closely examined. This thesis offers a detailed investigation of NLRC4, NLRP3 and caspase-11 inflammasome signalling in neutrophils during in vitro or in vivo challenge with whole microbe, purified microbial components, or adjuvant. This thesis demonstrates that acute Salmonella infection triggered NLRC4-dependent caspase-1 activation and IL-1β processing in neutrophils, and neutrophils were a major cellular compartment for IL-1β production during acute Salmonella challenge in vivo. Importantly, neutrophils did not undergo pyroptotic cell death upon NLRC4 activation, allowing these cells to sustain IL-1β production at a site of infection without compromising their crucial inflammasome-independent antimicrobial effector functions. -
NLRP3-Inflammasome Inhibition During Respiratory Virus Infection
viruses Article NLRP3-Inflammasome Inhibition during Respiratory Virus Infection Abrogates Lung Immunopathology and Long-Term Airway Disease Development Carrie-Anne Malinczak 1 , Charles F. Schuler 2,3, Angela J. Duran 1, Andrew J. Rasky 1, Mohamed M. Mire 1, Gabriel Núñez 1, Nicholas W. Lukacs 1,3 and Wendy Fonseca 1,* 1 Department of Pathology, University of Michigan, Ann Arbor, MI 48109, USA; [email protected] (C.-A.M.); [email protected] (A.J.D.); [email protected] (A.J.R.); [email protected] (M.M.M.); [email protected] (G.N.); [email protected] (N.W.L.) 2 Department of Internal Medicine, Division of Allergy and Clinical Immunology, University of Michigan, Ann Arbor, MI 48109, USA; [email protected] 3 Mary H. Weiser Food Allergy Center, University of Michigan, Ann Arbor, MI 48109, USA * Correspondence: [email protected] Abstract: Respiratory syncytial virus (RSV) infects most infants by two years of age. It can cause severe disease leading to an increased risk of developing asthma later in life. Previously, our group has shown that RSV infection in mice and infants promotes IL-1β production. Here, we characterized the role of NLRP3-Inflammasome activation during RSV infection in adult mice and neonates. We observed that the inhibition of NLRP3 activation using the small molecule inhibitor, MCC950, or in Citation: Malinczak, C.-A.; Schuler, genetically modified NLRP3 knockout (Nlrp3−/−) mice during in vivo RSV infection led to decreased C.F.; Duran, A.J.; Rasky, A.J.; Mire, lung immunopathology along with a reduced expression of the mucus-associated genes and reduced M.M.; Núñez, G.; Lukacs, N.W.; production of innate cytokines (IL-1β, IL-33 and CCL2) linked to severe RSV disease while leading to Fonseca, W. -
The Role of TGFβ Type III Receptor in Lung Cancer Cell Migration And
Western University Scholarship@Western Electronic Thesis and Dissertation Repository 6-26-2018 1:00 PM The role of TGFβ type III receptor in lung cancer cell migration and invasion Anthony Ziccarelli The University of Western Ontario Supervisor Di Guglielmo, John The University of Western Ontario Graduate Program in Physiology and Pharmacology A thesis submitted in partial fulfillment of the equirr ements for the degree in Master of Science © Anthony Ziccarelli 2018 Follow this and additional works at: https://ir.lib.uwo.ca/etd Recommended Citation Ziccarelli, Anthony, "The role of TGFβ type III receptor in lung cancer cell migration and invasion" (2018). Electronic Thesis and Dissertation Repository. 5454. https://ir.lib.uwo.ca/etd/5454 This Dissertation/Thesis is brought to you for free and open access by Scholarship@Western. It has been accepted for inclusion in Electronic Thesis and Dissertation Repository by an authorized administrator of Scholarship@Western. For more information, please contact [email protected]. i Abstract Metastasis is responsible for 90% of cancer-related deaths. An important early step in the metastatic process is epithelial-to-mesenchymal transition (EMT) of tumor cells. Stimulated by TGFβ signaling, cells that undergo EMT have increased migratory and invasive potential, resulting in metastasis and the development of tumors at a secondary site. The TGFβ type 3 receptor (TβR3) has been implicated in modulating TGFβ signaling, yet its functional outcomes remain unclear. My findings demonstrated that TβR3 silencing does not alter TGFβ-dependent Smad2 phosphorylation in neither H1299, not A549 non- small cell lung carcinoma cells but reduces Smad2 expression in H1299 cells. -
Inflammasome Regulation: Therapeutic Potential For
molecules Review Inflammasome Regulation: Therapeutic Potential for Inflammatory Bowel Disease Qiuyun Xu 1, Xiaorong Zhou 1 , Warren Strober 2,* and Liming Mao 1,3,* 1 Department of Immunology, School of Medicine, Nantong University, 19 Qixiu Road, Nantong 226019, China; [email protected] (Q.X.); [email protected] (X.Z.) 2 Mucosal Immunity Section, Laboratory of Clinical Immunology and Microbiology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA 3 Basic Medical Research Center, School of Medicine, Nantong University, Nantong 226019, China * Correspondence: [email protected] (W.S.); [email protected] (L.M.) Abstract: Inflammasomes are multiprotein complexes formed to regulate the maturation of pro- inflammatory caspases, in response to intracellular or extracellular stimulants. Accumulating studies showed that the inflammasomes are implicated in the pathogenesis of inflammatory bowel disease (IBD), although their activation is not a decisive factor for the development of IBD. Inflammasomes and related cytokines play an important role in the maintenance of gut immune homeostasis, while its overactivation might induce excess immune responses and consequently cause tissue damage in the gut. Emerging studies provide evidence that some genetic abnormalities might induce enhanced NLRP3 inflammasome activation and cause colitis. In these cases, the colonic inflammation can be ameliorated by blocking NLRP3 activation or its downstream cytokine IL-1β. A number of natural products were shown to play a role in preventing colon inflammation in various experimental colitis models. On the other hand, lack of inflammasome function also causes intestinal abnormalities. Thus, an appropriate regulation of inflammasomes might be a promising therapeutic strategy for IBD Citation: Xu, Q.; Zhou, X.; Strober, intervention. -
J.M. Davis and L. Ramakrishnan. 2009. the Role of the Granuloma In
The Role of the Granuloma in Expansion and Dissemination of Early Tuberculous Infection J. Muse Davis1 and Lalita Ramakrishnan2,* 1Immunology and Molecular Pathogenesis Graduate Program, Emory University, Atlanta, GA 30322, USA 2Departments of Microbiology, Medicine, and Immunology, University of Washington, Seattle, WA 98195, USA *Correspondence: [email protected] DOI 10.1016/j.cell.2008.11.014 SUMMARY and plateaus coincident with the development of adaptive immu- nity (North and Jung, 2004; Swaim et al., 2006). Hence, accord- Granulomas, organized aggregates of immune cells, ing to the classical model, granuloma formation requires adap- form in response to persistent stimuli and are hall- tive immunity and is critical for restricting bacterial expansion marks of tuberculosis. Tuberculous granulomas (Andersen, 1997; Saunders and Cooper, 2000). have long been considered host-protective struc- Studies in transparent zebrafish embryos infected with Myco- tures formed to contain infection. However, work in bacterium marinum (Mm), a system which recapitulates the zebrafish infected with Mycobacterium marinum earliest stages of tuberculosis (Clay et al., 2008; Dannenberg, 1993; Lesley and Ramakrishnan, 2008; Stamm and Brown, suggests that granulomas contribute to early bacte- 2004; Tobin and Ramakrishnan, 2008), refute the classical model rial growth. Here we use quantitative intravital micros- of granuloma initiation as a host-protective event in fundamental copy to reveal distinct steps of granuloma formation ways. First, epithelioid granulomas are found to form within days and assess their consequence for infection. Intracel- of infection, well before adaptive immunity is present (Davis lular mycobacteria use the ESX-1/RD1 virulence locus et al., 2002). Second, granuloma formation coincides with the to induce recruitment of new macrophages to, and accelerated bacterial expansion widely thought to precede it their rapid movement within, nascent granulomas. -
Genetic Variants of the NLRP3 Inflammasome Are Associated with Stroke in Patients with Rheumatoid Arthritis
Genetic Variants of the NLRP3 Inflammasome Are Associated with Stroke in Patients with Rheumatoid Arthritis Alf Kastbom, Lisbeth Ärlestig, and Solbritt Rantapää-Dahlqvist ABSTRACT. Objective. Inflammasomes are intracellular protein complexes important for the production of pro- inflammatory cytokines. Studies have suggested that the NLRP3 inflammasome influences both the severity of rheumatoid arthritis (RA) and development of atherosclerosis. Therefore, we investigated whether functional genetic variants related to the NLRP3 inflammasome influence the risk of cardio- vascular (CV) disease (CVD) in patients with RA. Methods. The incidence of CVD was assessed in 522 patients with established RA by a retrospective survey of medical records in combination with a 6-year prospective followup. NLRP3-Q705K and CARD8-C10X genotypes were analyzed in relation to CVD by logistic regression, adjusting for tradi- tional risk factors, antirheumatic treatment, and age at the onset of RA. Results. Carriage of the NLRP3-Q705K minor allele was associated with an increased risk of stroke/transient ischemic attack (TIA; OR 2.01, 95% CI 1.0–4.1, p = 0.05), while CARD8-C10X was not associated with any type of CV event. Patients with ≥ 1 variant allele in both polymorphisms had an increased risk of CVD when compared with patients without variant alleles present in both polymor- phisms (adjusted OR 3.05, 95% CI 1.42–6.54, p = 0.004). Stratification showed that this risk was confined to stroke/TIA (adjusted OR 5.09, 95% CI 2.27–11.44, p < 0.0001) and not to myocardial infarction (MI)/angina pectoris (adjusted OR 1.58, 95% CI 0.67–3.73). -
The Molecular Links Between Cell Death and Inflammasome
cells Review The Molecular Links between Cell Death and Inflammasome Kwang-Ho Lee 1,2 and Tae-Bong Kang 1,2,* 1 Department of Biotechnology, College of Biomedical & Health Science, Konkuk University, Chungju 27478, Korea 2 Research Institute of Inflammatory Diseases, Konkuk University, Chungju 27478, Korea * Correspondence: [email protected]; Tel.: +82-43-840-3904; Fax: +82-43-852-3616 Received: 30 July 2019; Accepted: 9 September 2019; Published: 10 September 2019 Abstract: Programmed cell death pathways and inflammasome activation pathways can be genetically and functionally separated. Inflammasomes are specialized protein complexes that process pro-inflammatory cytokines, interleukin-1β (IL-1β), and IL-18 to bioactive forms for protection from a wide range of pathogens, as well as environmental and host-derived danger molecules. Programmed cell death has been extensively studied, and its role in the development, homeostasis, and control of infection and danger is widely appreciated. Apoptosis and the recently recognized necroptosis are the best-characterized forms of programmed death, and the interplay between them through death receptor signaling is also being studied. Moreover, growing evidence suggests that many of the signaling molecules known to regulate programmed cell death can also modulate inflammasome activation in a cell-intrinsic manner. Therefore, in this review, we will discuss the current knowledge concerning the role of the signaling molecules originally associated with programmed cell death in the activation of inflammasome and IL-1β processing. Keywords: inflammasome; apoptosis; necroptosis; programmed cell death; Caspase-8; RIPK1/3; MLKL; PGAM5; DRP1 1. Introduction Homeostasis is a principle property of living organisms and it is maintained at the systemic, tissue, and cellular levels through the homeostatic control system. -
Role of the Inflammasome, IL-1Β, and IL-18 in Bacterial Infections
Review Article TheScientificWorldJOURNAL (2011) 11, 2037–2050 ISSN 1537-744X; doi:10.1100/2011/212680 Role of the Inflammasome, IL-1β, and IL-18 in Bacterial Infections Manoranjan Sahoo, Ivonne Ceballos-Olvera, Laura del Barrio, and Fabio Re Department of Microbiology, Immunology, and Biochemistry, University of Tennessee Health Science Center, Memphis, TN 38163, USA Received 20 July 2011; Accepted 30 September 2011 Academic Editor: Giamila Fantuzzi The inflammasome is an important innate immune pathway that regulates at least two host responses protective against infections: (1) secretion of the proinflammatory cytokines IL-1β and IL-18 and (2) induction of pyroptosis, a form of cell death. Inflammasomes, of which different types have been identified, are multiprotein complexes containing pattern recognition receptors belonging to the Nod-like receptor family or the PYHIN family and the protease caspase-1. The molecular aspects involved in the activation of different inflammasomes by various pathogens are being rapidly elucidated, and their role during infections is being characterized. Production of IL-1β and IL-18 and induction of pyroptosis of the infected cell have been shown to be protective against many infectious agents. Here, we review the recent literature concerning inflammasome activation in the context of bacterial infections and identify important questions to be answered in the future. KEYWORDS: Innate immunity, pattern recognition receptors, Toll-like receptors, Nod-like receptors, inflammasome, caspase-1, Interleukin-1β, Interleukin-18, inflammation, and bacterial infection Correspondence should be addressed to Fabio Re, [email protected] Copyright © 2011 Manoranjan Sahoo et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. -
Snapshot: Inflammasomes Maninjay K
272 Cell SnapShot: Infl ammasomes Maninjay K. Atianand,1 Vijay A. Rathinam,1 and Katherine A. Fitzgerald1 153 1Division of Infectious Diseases and Immunology, University of Massachusetts Medical School, Worcester, MA 01605, USA , March 28,2013 ©2013Elsevier Inc. , March DOI http://dx.doi.org/10.1016/j.cell.2013.03.009 Basic inflammasome structure Ca+ Bacterium containing CASR type III secretion system P2X7 receptor Gram-negative Bacteria Salmonella typhimurium Signal 2 ATP Pseuodomonas aeruginosa PLC AC Potassium RECEPTOR NLR or ALR efux Signal 3 Lysosomal destabilization GBP5 PrgJ ADAPTOR ASC Inflammasome Inhibition Bacterial Flagellin complex InsP3 of cAMP mRNA TLR4 Procaspase-1 TRIF + Ca ROS Mitochondrion NLRP3 NAIPs5/6 NAIP2 EFFECTOR Active caspase-1 PKC-δ ROS Type I interferons NLRC4/IPAF pro-IL-1b IL-1b ER stress pro-IL-18 IL-18 Oxidized + mitochondrial DNA Ca P P Signal 1 H+ ASC Active H+ caspase-11 M2 channel NUCLEUS Endoplasmic Trans-golgi Procaspase-1 Procaspase-1 reticulum (ER) Cell death IL-1a & HMGB1 release Active caspase-1 Cell death IL-1a & HMGB1 Cytosolic bacteria pro-IL-1b IL-1b release Francisella tularensis pro-IL-18 IL-18 Listeria monocyotgenes PA Anthrax See online version for legend and references. and legend for version online See lethal toxin Intestinal inflammation Diacylated AIM2 and homeostasis Yersinia pestis lipopeptides ASC LF Microbes ? NLRP6 NLRP12 NLRP7 DNA viruses NLRP1b mCMV Procaspase-1 Vaccinia Herpes viruses (In human monocytes & macrophages) IFI16 ASC KSHV DNA NUCLEUS Procaspase-1 SnapShot: Inflammasomes Maninjay K. Atianand,1 Vijay A. Rathinam,1 and Katherine A. Fitzgerald1 1Division of Infectious Diseases and Immunology, University of Massachusetts Medical School, Worcester, MA 01605, USA Large multiprotein complexes referred to as inflammasomes form in the cytosol during infection or in response to endogenous danger signals released from damaged or dying cells and regulate the processing and secretion of IL-1β and IL-18 as well as an inflammatory form of cell death called pyroptosis. -
Noncoding Rnas As Novel Pancreatic Cancer Targets
NONCODING RNAS AS NOVEL PANCREATIC CANCER TARGETS by Amy Makler A Thesis Submitted to the Faculty of The Charles E. Schmidt College of Science In Partial Fulfillment of the Requirements for the Degree of Master of Science Florida Atlantic University Boca Raton, FL August 2018 Copyright 2018 by Amy Makler ii ACKNOWLEDGEMENTS I would first like to thank Dr. Narayanan for his continuous support, constant encouragement, and his gentle, but sometimes critical, guidance throughout the past two years of my master’s education. His faith in my abilities and his belief in my future success ensured I continue down this path of research. Working in Dr. Narayanan’s lab has truly been an unforgettable experience as well as a critical step in my future endeavors. I would also like to extend my gratitude to my committee members, Dr. Binninger and Dr. Jia, for their support and suggestions regarding my thesis. Their recommendations added a fresh perspective that enriched our initial hypothesis. They have been indispensable as members of my committee, and I thank them for their contributions. My parents have been integral to my successes in life and their support throughout my education has been crucial. They taught me to push through difficulties and encouraged me to pursue my interests. Thank you, mom and dad! I would like to thank my boyfriend, Joshua Disatham, for his assistance in ensuring my writing maintained a logical progression and flow as well as his unwavering support. He was my rock when the stress grew unbearable and his encouraging words kept me pushing along.