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Cyclotides Evolve
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 218 Cyclotides evolve Studies on their natural distribution, structural diversity, and activity SUNGKYU PARK ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6192 ISBN 978-91-554-9604-3 UPPSALA urn:nbn:se:uu:diva-292668 2016 Dissertation presented at Uppsala University to be publicly examined in B/C4:301, BMC, Husargatan 3, Uppsala, Friday, 10 June 2016 at 09:00 for the degree of Doctor of Philosophy (Faculty of Pharmacy). The examination will be conducted in English. Faculty examiner: Professor Mohamed Marahiel (Philipps-Universität Marburg). Abstract Park, S. 2016. Cyclotides evolve. Studies on their natural distribution, structural diversity, and activity. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 218. 71 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-554-9604-3. The cyclotides are a family of naturally occurring peptides characterized by cyclic cystine knot (CCK) structural motif, which comprises a cyclic head-to-tail backbone featuring six conserved cysteine residues that form three disulfide bonds. This unique structural motif makes cyclotides exceptionally resistant to chemical, thermal and enzymatic degradation. They also exhibit a wide range of biological activities including insecticidal, cytotoxic, anti-HIV and antimicrobial effects. The cyclotides found in plants exhibit considerable sequence and structural diversity, which can be linked to their evolutionary history and that of their host plants. To clarify the evolutionary link between sequence diversity and the distribution of individual cyclotides across the genus Viola, selected known cyclotides were classified using signature sequences within their precursor proteins. By mapping the classified sequences onto the phylogenetic system of Viola, we traced the flow of cyclotide genes over evolutionary history and were able to estimate the prevalence of cyclotides in this genus. -
Levels and Endocrine Disruptive Effects of Legacy Pops and Their Metabolites in Long-Finned Pilot Whales of the Faroe Islands
Doctoral theses at NTNU, 2017:279 Katrin S. Ho Katrin S. Hoydal ydal Levels and endocrine disruptive oral thesis oral effects of legacy POPs and their metabolites in long-finned pilot Doct whales of the Faroe Islands ISBN 978-82-326-2626-7 (printed ver.) ISBN 978-82-326-2627-4 (electronic ver.) ISSN 1503-8181 Doctoral theses at NTNU, 2017:279 NTNU Philosophiae Doctor Philosophiae Department of Biology Thesis for the Degree of the Degree Thesis for Faculty of Natural Sciences of Natural Faculty egian University of Science and Technology of Science egian University Norw Katrin S. Hoydal Levels and endocrine disruptive effects of legacy POPs and their metabolites in long-finned pilot whales of the Faroe Islands Thesis for the Degree of Philosophiae Doctor Trondheim, October 2017 Norwegian University of Science and Technology Faculty of Natural Sciences Department of Biology NTNU Norwegian University of Science and Technology Thesis for the Degree of Philosophiae Doctor Faculty of Natural Sciences Department of Biology © Katrin S. Hoydal ISBN 978-82-326-2626-7 (printed ver.) ISBN 978-82-326-2627-4 (electronic ver.) ISSN 1503-8181 Doctoral theses at NTNU, 2017:279 Printed by NTNU Grafisk senter Acknowledgements This study was carried out as a PhD project at the Norwegian University of Science and Technology (NTNU) in Trondheim, Norway, where most of the analyses were performed. Additionally, analyses have been performed at the University of Barcelona (UB) and the University of Copenhagen (KU), as well as the samples have been sent to Natural Wildlife Research Centre, Carleton University, Ottawa, Canada for analysis of contaminants. -
Cally Plant List a ACIPHYLLA Horrida
Cally Plant List A ACIPHYLLA horrida ACONITUM albo-violaceum albiflorum ABELIOPHYLLUM distichum ACONITUM cultivar ABUTILON vitifolium ‘Album’ ACONITUM pubiceps ‘Blue Form’ ACAENA magellanica ACONITUM pubiceps ‘White Form’ ACAENA species ACONITUM ‘Spark’s Variety’ ACAENA microphylla ‘Kupferteppich’ ACONITUM cammarum ‘Bicolor’ ACANTHUS mollis Latifolius ACONITUM cammarum ‘Franz Marc’ ACANTHUS spinosus Spinosissimus ACONITUM lycoctonum vulparia ACANTHUS ‘Summer Beauty’ ACONITUM variegatum ACANTHUS dioscoridis perringii ACONITUM alboviolaceum ACANTHUS dioscoridis ACONITUM lycoctonum neapolitanum ACANTHUS spinosus ACONITUM paniculatum ACANTHUS hungaricus ACONITUM species ex. China (Ron 291) ACANTHUS mollis ‘Long Spike’ ACONITUM japonicum ACANTHUS mollis free-flowering ACONITUM species Ex. Japan ACANTHUS mollis ‘Turkish Form’ ACONITUM episcopale ACANTHUS mollis ‘Hollard’s Gold’ ACONITUM ex. Russia ACANTHUS syriacus ACONITUM carmichaelii ‘Spätlese’ ACER japonicum ‘Aconitifolium’ ACONITUM yezoense ACER palmatum ‘Filigree’ ACONITUM carmichaelii ‘Barker’s Variety’ ACHILLEA grandifolia ACONITUM ‘Newry Blue’ ACHILLEA ptarmica ‘Perry’s White’ ACONITUM napellus ‘Bergfürst’ ACHILLEA clypeolata ACONITUM unciniatum ACIPHYLLA monroi ACONITUM napellus ‘Blue Valley’ ACIPHYLLA squarrosa ACONITUM lycoctonum ‘Russian Yellow’ ACIPHYLLA subflabellata ACONITUM japonicum subcuneatum ACONITUM meta-japonicum ADENOPHORA aurita ACONITUM napellus ‘Carneum’ ADIANTUM aleuticum ‘Japonicum’ ACONITUM arcuatum B&SWJ 774 ADIANTUM aleuticum ‘Miss Sharples’ ACORUS calamus ‘Argenteostriatus’ -
Dispersion of Vascular Plant in Mt. Huiyangsan, Korea
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Journal of Korean Nature Vol. 3, No. 1 1-10, 2010 Dispersion of Vascular Plant in Mt. Huiyangsan, Korea Hyun-Tak Shin1, Sung-Tae Yoo2, Byung-Do Kim2, and Myung-Hoon YI3* 1Gyeongsangnam-do Forest Environment Research Institute, Jinju 660-871, Korea 2Daegu Arboretum 284 Daegok-Dong Dalse-Gu Daegu 704-310, Korea 3Department of Landscape Architecture, Graduate School, Yeungnam University, Gyeongsan 712-749, Korea Abstract: We surveyed that vascular plants can be classified into 90 families and 240 genus, 336 species, 69 variants, 22 forms, 3 subspecies, total 430 taxa. Dicotyledon plant is 80.9%, monocotyledon plant is 9.8%, Pteridophyta is 8.1%, Gymnosermae is 1.2% among the whole plant family. Rare and endangered plants are Crypsinus hastatus, Lilium distichum, Viola albida, Rhododendron micranthum, totalling four species. Endemic plants are Carex okamotoi, Salix koriyanagi for. koriyanagi, Clematis trichotoma, Thalictrum actaefolium var. brevistylum, Galium trachyspermum, Asperula lasiantha, Weigela subsessilis, Adenophora verticillata var. hirsuta, Aster koraiensis, Cirsium chanroenicum and Saussurea seoulensis total 11 taxa. Specialized plants are 20 classification for I class, 7 classifications for the II class, 7 classifications for the III class, 2 classification for the IV class, and 1 classification for the V class, total 84 taxa. Naturalized plants specified in this study are 10 types but Naturalization rate is not high compared to the area of BaekDu-DaeGan. This survey area is focused on the center of BaekDu- DaeGan, and it has been affected by excessive investigations and this area has been preserved as Buddhist temples' woods. -
Botanica Pacifica
Russian Academy of Sciences, Far Eastern Branch Botanical Garden-Institute botanica pacifica A journal of plant science and conservation Volume 9, No. 1 2020 VLADIVOSTOK 2020 Botanica Pacifica. A journal of plant science and conservation. 2020. 9(1): 3–52 DOI: 10.17581/bp.2020.09113 Revision of the genus Viola L. (Violaceae) in the Russian Far East with notes on adjacent territories Marc Espeut Marc Espeut ABSTRACT e-mail: [email protected] This study proposes a revision of the genus Viola L. (Violaceae) in the Russian 34, rue de l'Agriculture, 66500 Prades, Far East and adjacent regions. It is based on the taxonomic work that Becker con- France ducted on the Asian Viola (1915–1928), but also on Clausen's cytotaxonomic stud- ies (1926–1964) that laid the foundations of the genus' phylogeny. Chromosome counts, as well as phylogenetic analyses, have allowed to specify the infrageneric taxonomy and establish relationships between some taxa of American or Asian ad- Manuscript received: 09.03.2020 jacent territories. A systematic treatment based on the Biological Species Concept, Review completed: 22.04.2020 associated with genetic, cytotaxonomic, and biogeographic data, allowed many sys- Accepted for publication: 02.05.2020 tematic and nomenclatural changes, at different levels: infrageneric, specific and Published online: 07.05.2020 infraspecific. This study shows the remarkable role of the Russian Far East for the conservation and differentiation of the genus Viola species, and probably for the whole flora of the Holarctic Kingdom. Keywords: Violaceae, Viola, Russian Far East, typifications, taxonomic novelties, no- TABLE OF CONTENTS menclatural novelties Introduction .......................................................... -
Developing Biodiverse Green Roofs for Japan: Arthropod and Colonizer Plant Diversity on Harappa and Biotope Roofs
20182018 Green RoofsUrban and Naturalist Urban Biodiversity SpecialSpecial Issue No. Issue 1:16–38 No. 1 A. Nagase, Y. Yamada, T. Aoki, and M. Nomura URBAN NATURALIST Developing Biodiverse Green Roofs for Japan: Arthropod and Colonizer Plant Diversity on Harappa and Biotope Roofs Ayako Nagase1,*, Yoriyuki Yamada2, Tadataka Aoki2, and Masashi Nomura3 Abstract - Urban biodiversity is an important ecological goal that drives green-roof in- stallation. We studied 2 kinds of green roofs designed to optimize biodiversity benefits: the Harappa (extensive) roof and the Biotope (intensive) roof. The Harappa roof mimics vacant-lot vegetation. It is relatively inexpensive, is made from recycled materials, and features community participation in the processes of design, construction, and mainte- nance. The Biotope roof includes mainly native and host plant species for arthropods, as well as water features and stones to create a wide range of habitats. This study is the first to showcase the Harappa roof and to compare biodiversity on Harappa and Biotope roofs. Arthropod species richness was significantly greater on the Biotope roof. The Harappa roof had dynamic seasonal changes in vegetation and mainly provided habitats for grassland fauna. In contrast, the Biotope roof provided stable habitats for various arthropods. Herein, we outline a set of testable hypotheses for future comparison of these different types of green roofs aimed at supporting urban biodiversity. Introduction Rapid urban growth and associated anthropogenic environmental change have been identified as major threats to biodiversity at a global scale (Grimm et al. 2008, Güneralp and Seto 2013). Green roofs can partially compensate for the loss of green areas by replacing impervious rooftop surfaces and thus, contribute to urban biodiversity (Brenneisen 2006). -
Floral Structure and Dynamics of Nectar Production in Echinacea Pallida Var
Int. J. Plant Sci. 169(6):708–722. 2008. Ó 2008 by The University of Chicago. All rights reserved. 1058-5893/2008/16906-0002$15.00 DOI: 10.1086/533602 FLORAL STRUCTURE AND DYNAMICS OF NECTAR PRODUCTION IN ECHINACEA PALLIDA VAR. ANGUSTIFOLIA (ASTERACEAE) Tyler J. Wist and Arthur R. Davis1 Department of Biology, University of Saskatchewan, 112 Science Place, Saskatoon, Saskatchewan S7N 5E2, Canada The reproductive structure of the disk florets of Echinacea pallida var. angustifolia (Asteraceae) in relation to insect pollination was investigated using light, fluorescence, and scanning electron microscopy. The study of this self-incompatible species emphasized pollen production, pollen-stigma interactions, transmitting tissue, and vasculature within the style. Nectary structure and nectar production dynamics were also examined. Produced in the fused anther tubes, the trinucleate pollen with yellow pollenkitt was plentiful per floret, yielding a pollen : ovule ratio of 24,130. Encircling the style base at the ovary summit, the floral nectary pos- sessed modified stomata whose pores, as well as nonstomatal gaps in the epidermis, provided apoplastic pathways for nectar escape and reabsorption. Phloem alone supplied the gland interior, the sieve element– companion cell complexes reaching up to the nectary epidermis. Nectar was hexose dominant, its volume and nectar-sugar quantity per floret peaking on the afternoon of the first day of anthesis until the morning of the second day. Nectar production only occurred in half of the florets for 3 d, rarely for 5 d. Potential honey production from fields of this species was estimated at 2.1–11.9 kg/ha. Keywords: floral nectar, nectary, pollen-stigma interactions, pollination, style. -
2014 Conservation Outlook Assessment (Archived)
IUCN World Heritage Outlook: https://worldheritageoutlook.iucn.org/ Shiretoko - 2014 Conservation Outlook Assessment (archived) IUCN Conservation Outlook Assessment 2014 (archived) Finalised on 15 June 2014 Please note: this is an archived Conservation Outlook Assessment for Shiretoko. To access the most up-to-date Conservation Outlook Assessment for this site, please visit https://www.worldheritageoutlook.iucn.org. Shiretoko SITE INFORMATION Country: Japan Inscribed in: 2005 Criteria: (ix) (x) Site description: Shiretoko Peninsula is located in the north-east of Hokkaido, the northernmost island of Japan. The site includes the land from the central part of the peninsula to its tip (Shiretoko Cape) and the surrounding marine area. It provides an outstanding example of the interaction of marine and terrestrial ecosystems as well as extraordinary ecosystem productivity, largely influenced by the formation of seasonal sea ice at the lowest latitude in the northern hemisphere. It has particular importance for a number of marine and terrestrial species, some of them endangered and endemic, such as Blackiston’s fish owl and the Viola kitamiana plant. The site is globally important for threatened seabirds and migratory birds, a number of salmonid species, and for marine mammals including Steller’s sea lion and some cetacean species. © UNESCO IUCN World Heritage Outlook: https://worldheritageoutlook.iucn.org/ Shiretoko - 2014 Conservation Outlook Assessment (archived) SUMMARY 2014 Conservation Outlook Good with some concerns The values of the site are intact despite a number of external threats. The site enjoys sound legal protection, has adequate planning in place and sufficient resources to address issues of concern. The State Party have adopted a range of active management interventions and continue to adapt management to accommodate changing circumstances. -
Vegetation Responses to Interglacial Warming
Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Clim. Past Discuss., 9, 245–267, 2013 www.clim-past-discuss.net/9/245/2013/ Climate doi:10.5194/cpd-9-245-2013 of the Past CPD © Author(s) 2013. CC Attribution 3.0 License. Discussions 9, 245–267, 2013 This discussion paper is/has been under review for the journal Climate of the Past (CP). Vegetation Please refer to the corresponding final paper in CP if available. responses to interglacial warming A. V. Lozhkin and Vegetation responses to interglacial P. M. Anderson warming in the Arctic, examples from Lake El’gygytgyn, northeast Siberia Title Page Abstract Introduction 1 2 A. V. Lozhkin and P. M. Anderson Conclusions References 1 Northeast Interdisciplinary Scientific Research Institute, Far East Branch, Russian Academy Tables Figures of Sciences, 16 Portovaya Street, Magadan, 685000, Russia 2Earth & Space Sciences and Quaternary Research Center, University of Washington, Seattle, 98195-1310, USA J I Received: 28 August 2012 – Accepted: 3 September 2012 – Published: 15 January 2013 J I Correspondence to: P. M. Anderson ([email protected]) Back Close Published by Copernicus Publications on behalf of the European Geosciences Union. Full Screen / Esc Printer-friendly Version Interactive Discussion 245 Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Abstract CPD Palynological data from Lake El’gygytgyn reveal responses of plant communities to a range of climatic conditions that can help assess the possible impact of global warm- 9, 245–267, 2013 ing on arctoboreal ecosystems. Vegetation associated with climatic optima suggests 5 two types of interglacial responses: one is dominated by deciduous taxa (the post- Vegetation glacial thermal maximum (PGTM) and marine isotope stage (MIS5)) and the second responses to by evergreen conifers (MIS11, MIS31). -
Conifer Quarterly
Conifer Quarterly Vol. 26 No. 2 Spring 2009 Picea abies ‘Reflexa’ Photo by Dennis Groh The Conifer Quarterly is th e pub lication of the American Conifer Society Contents 7 How I spruced up Georgia by Tom Cox 10 A Fungus Made Us Do It by Bill Van Kosky 17 Brassica hirta by Phil Syphrit 19 Stonehedge, the Garden of Ken and Elena Jordan Text and Photos by Jack Ayers 26 Winter Burn on Conifers by Ellen Kelley 28 Evaluating Landscape Adaptability of Hemlock Species Picea abies 'Lanham's Beehive' ( spp.) in Western North Carolina Photo by Randall C. Smith, Courtesy of Iseli Nursery Tsuga by Anthony V. LeBude and Thomas G. Ranney 32 Collecting Northern Conifers by William Journeay 36 Conifer Destinations by Tom Cox 38 Conifers with Leaves by Maud Henne American Conifer Society Voices 2 President’s Message 4 Editor’s Memo 16 Letter to the Editor 41 ACS 2009 National Meeting 44 2009 Western Region Meeting 46 $7,000 Awarded to Four Southeast Regional Gardens Picea omorika ‘Pimoko’ Photo by Randall C. Smith, Courtesy of Iseli Nursery Vol. 26 No. 2 CONIFER QUARTERLY 3 Conifer AS I SEE IT FROM THE PRESIDENT ’S DESK “Everything is connected to everything At the recently concluded Winter way to recruit new members. else. There is one ecosphere for all living Board Meeting, the board focused on The charge to each region, then, is to Quarterly organisms and what affects one, affects membership. Our concern is not as much develop a plan to increase membership in all. ” with members who do not renew their region. -
Table of Contents
WELCOME TO LOST HORIZONS 2015 CATALOGUE Table of Contents Welcome to Lost Horizons . .15 . Great Plants/Wonderful People . 16. Nomenclatural Notes . 16. Some History . 17. Availability . .18 . Recycle . 18 Location . 18 Hours . 19 Note on Hardiness . 19. Gift Certificates . 19. Lost Horizons Garden Design, Consultation, and Construction . 20. Understanding the catalogue . 20. References . 21. Catalogue . 23. Perennials . .23 . Acanthus . .23 . Achillea . .23 . Aconitum . 23. Actaea . .24 . Agastache . .25 . Artemisia . 25. Agastache . .25 . Ajuga . 26. Alchemilla . 26. Allium . .26 . Alstroemeria . .27 . Amsonia . 27. Androsace . .28 . Anemone . .28 . Anemonella . .29 . Anemonopsis . 30. Angelica . 30. For more info go to www.losthorizons.ca - Page 1 Anthericum . .30 . Aquilegia . 31. Arabis . .31 . Aralia . 31. Arenaria . 32. Arisaema . .32 . Arisarum . .33 . Armeria . .33 . Armoracia . .34 . Artemisia . 34. Arum . .34 . Aruncus . .35 . Asarum . .35 . Asclepias . .35 . Asparagus . .36 . Asphodeline . 36. Asphodelus . .36 . Aster . .37 . Astilbe . .37 . Astilboides . 38. Astragalus . .38 . Astrantia . .38 . Aubrieta . 39. Aurinia . 39. Baptisia . .40 . Beesia . .40 . Begonia . .41 . Bergenia . 41. Bletilla . 41. Boehmeria . .42 . Bolax . .42 . Brunnera . .42 . For more info go to www.losthorizons.ca - Page 2 Buphthalmum . .43 . Cacalia . 43. Caltha . 44. Campanula . 44. Cardamine . .45 . Cardiocrinum . 45. Caryopteris . .46 . Cassia . 46. Centaurea . 46. Cephalaria . .47 . Chelone . .47 . Chelonopsis . .. -
Plant of the Month: Cardamine Heptaphylla 'Big White' Joe Sime
THE NEWSLETTER OF THE SHADE AND WOODLAND PLANTS GROUP May 2019 Plant of the Month: Cardamine heptaphylla 'Big White' Joe Sime I like cardamines and cannot resist buying and planting any new ones that I see. This has led to some disappointments. I could never get C. diphylla to thrive, having tried the basic form, 'Echo Cutleaf' and 'American Sweetheart' in the past. It has also led to some problems. I bought and planted C. bulbifera in spite of the clear warning given to me by the seller. It is a redefinition of the term 'Thug'. It spreads by rhizomes and by bulbils produced in the leaf axils. I have tried to confine it to one particular area of the garden, but the bulbils have obviously managed to spread themselves around in the dead leaves used for leaf mould and I now have little colonies trying to establish themselves around the place. Luckily they are easy to spot and pull up. There are easier ways to get pink flowers! However 'Big White' is neither a disappointment nor a thug. It is large for a cardamine, growing to about 40 cms tall and as much across. The leaves are large with, as the name suggests, seven toothed leaflets. In spring it produces good heads of pure white flowers. It should produce the long seed pods typical of the brassica family but mine has not. It is dormant by mid summer leaving room for later things around it. The basic species comes from meadows and woodland in central and southern Europe. It is said to prefer alkaline soils and a fairly open site, but manages with the acid side of neutral and an overhead oak tree here.