Saving Freshwater Fishes and Habitats’
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Freshwater Fishes
WESTERN CAPE PROVINCE state oF BIODIVERSITY 2007 TABLE OF CONTENTS Chapter 1 Introduction 2 Chapter 2 Methods 17 Chapter 3 Freshwater fishes 18 Chapter 4 Amphibians 36 Chapter 5 Reptiles 55 Chapter 6 Mammals 75 Chapter 7 Avifauna 89 Chapter 8 Flora & Vegetation 112 Chapter 9 Land and Protected Areas 139 Chapter 10 Status of River Health 159 Cover page photographs by Andrew Turner (CapeNature), Roger Bills (SAIAB) & Wicus Leeuwner. ISBN 978-0-620-39289-1 SCIENTIFIC SERVICES 2 Western Cape Province State of Biodiversity 2007 CHAPTER 1 INTRODUCTION Andrew Turner [email protected] 1 “We live at a historic moment, a time in which the world’s biological diversity is being rapidly destroyed. The present geological period has more species than any other, yet the current rate of extinction of species is greater now than at any time in the past. Ecosystems and communities are being degraded and destroyed, and species are being driven to extinction. The species that persist are losing genetic variation as the number of individuals in populations shrinks, unique populations and subspecies are destroyed, and remaining populations become increasingly isolated from one another. The cause of this loss of biological diversity at all levels is the range of human activity that alters and destroys natural habitats to suit human needs.” (Primack, 2002). CapeNature launched its State of Biodiversity Programme (SoBP) to assess and monitor the state of biodiversity in the Western Cape in 1999. This programme delivered its first report in 2002 and these reports are updated every five years. The current report (2007) reports on the changes to the state of vertebrate biodiversity and land under conservation usage. -
Stenodus Leucichthys Nelma
Geomorphology and inconnu spawning site selection: an approach using GIS and remote sensing Item Type Thesis Authors Tanner, Theresa Lynn Download date 26/09/2021 20:09:43 Link to Item http://hdl.handle.net/11122/6998 (,!OMORPilOI OGY AND fNCONNl! SPAWNING SU P SIN I t : I H.D APPROACH USING GIS AND RE MOT I- SENSING By I hcrcsa I ynn banner EEC, OMMENDED: Dr. David Verbyla Dr. Mark S- Wipfli Dr. t .Joseph iVlargrab Advisory CAyiuniltec (hair Dr. William W. Smoker, Director, i asheries Division APPROVED; Dean, Schooiof Fisheries and OEgijn Sciences (Mm of the Graduate School I Ene GEOMORPHOLOGY AND INCONNU SPAWNING SITE SELECTION: AN APPROACH USING GIS AND REMOTE SENSING A THESIS Presented to the Faculty of the University of Alaska Fairbanks in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE By Theresa Lynn Tanner, A.S., B.S. Fairbanks, Alaska August 2008 iii ABSTRACT This study examined the spatial components of inconnu Stenodus leucichthys spawning habitat use in the Selawik River, Alaska. Little is known about inconnu critical habitat needs; however, current studies of inconnu spawning behavior suggest a high level of habitat selectivity. This level of selectivity implies that there are specific habitat characteristics that these fish require for spawning. The purpose of this study was to build a heuristic habitat model that can be used to better understand inconnu spawning site selection in remote Alaskan watersheds. Using readily available, low- or no-cost remote sensing data layers, geographical information systems (GIS) were used in conjunction with multivariate statistics in an attempt to clarify relationships between geomorphologic features and spawning site selection. -
Molecular Investigations of the Diversity of Freshwater Fishes Across Three Continents
Molecular Investigations of the Diversity of Freshwater Fishes across Three Continents by Malorie M. Hayes A dissertation submitted to the Graduate Faculty of Auburn University in partial fulfillment of the requirements for the Degree of Doctor of Philosophy Auburn, Alabama August 8, 2020 Keywords: Enteromius, Barbus, sub-Saharan Africa, phylogenetics, systematics, Pteronotropis, conservation genetics, Trichomycterus, Guyana Copyright 2020 by Malorie M. Hayes Approved by Jonathan W. Armbruster, Chair, Professor and Director Auburn University Museum of Natural History Department of Biological Sciences Jason E. Bond, Professor and Schlinger Chair in Insect Systematics University of California, Davis Scott R. Santos, Professor and Chair of the Department of Biological Sciences at Auburn University John P. Friel, Director of the Alabama Museum of Natural History Abstract Fishes are the most speciose vertebrates, and incredible diversity can be found within different groups of fish. Due to their physiological limitations, fish are confined to waters, and in freshwater fish, this is restricted to lakes, rivers, and streams. With a constrained habitat like a freshwater system, it can be expected that freshwater fish will show varying levels of diversity depending on a suite of characteristics. Within this dissertation, I examine the diversity of three fish groups: the speciose Enteromius of West Africa, the population genetic diversity of Pteronotropis euryzonus in Alabama and Georgia, and the unexpectedly species rich Trichomycterus from the Guyana highlands. I use molecular methods and geometric morphometrics to determine the systematics of the species and uncover the hidden diversity within their respective groups. When it comes to diversity, the small barbs of Africa are vastly understudied and require a taxonomic revision. -
The Thermal Tolerance and Preference Of
The thermal tolerances and preferences of native fish in the Cape Floristic Region: towards understanding the effect of climate change on native fish species by Jody-Lee Reizenberg Town Thesis presented for the Degree of Master of Science Cape in the Department of Biological Sciences University of Cape Town March 2017 Supervisors: Dr Helen Dallas, Dr Jeremy Shelton, and Dr Cecile Reed University The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town DECLARATION I hereby declare that the work on which this thesis is based is my original work (except where acknowledgements indicate otherwise) and that neither the whole work nor any part of it has been, is being, or is to be submitted for another degree in this or any other university. I authorise the University to reproduce for the purpose of research either the whole or any portion of the contents in any manner whatsoever. This thesis reports original research carried out under the Department of Biological Sciences, Faculty of Science, University of Cape Town, between 2015 and 2016 for the M.Sc. study purpose. The data presented here are my own. I have fully acknowledged any assistance received. I know the meaning of plagiarism and declare that all of the work in the dissertation, save for that which is properly acknowledged, is my own. -
Geomorphology and Inconnu Spawning Site Selection: An
GEOMORPHOLOGY AND INCONNU SPAWNING SITE SELECTION: AN APPROACH USING GIS AND REMOTE SENSING A THESIS Presented to the Faculty of the University of Alaska Fairbanks in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE By Theresa Lynn Tanner, A.S., B.S. Fairbanks, Alaska August 2008 iii ABSTRACT This study examined the spatial components of inconnu Stenodus leucichthys spawning habitat use in the Selawik River, Alaska. Little is known about inconnu critical habitat needs; however, current studies of inconnu spawning behavior suggest a high level of habitat selectivity. This level of selectivity implies that there are specific habitat characteristics that these fish require for spawning. The purpose of this study was to build a heuristic habitat model that can be used to better understand inconnu spawning site selection in remote Alaskan watersheds. Using readily available, low- or no-cost remote sensing data layers, geographical information systems (GIS) were used in conjunction with multivariate statistics in an attempt to clarify relationships between geomorphologic features and spawning site selection. Spatial resolution of the remotely sensed data available in this study did not provide sufficient spatial detail to generate statistical correlations between spawning habitat selection and landscape characterizations. However, spawning occurred in areas of transition from high to low gradients, and in reaches typified as having very low slopes with very high sinuosity. Additionally, exploratory use of Radarsat -
An Ecological Study on the Maluti Minnow (Pseudobarbus Quathlambae) in the Catchment Area of Phase Ib of the Lesotho Highland Water Scheme
COPYRIGHT AND CITATION CONSIDERATIONS FOR THIS THESIS/ DISSERTATION o Attribution — You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use. o NonCommercial — You may not use the material for commercial purposes. o ShareAlike — If you remix, transform, or build upon the material, you must distribute your contributions under the same license as the original. How to cite this thesis Surname, Initial(s). (2012) Title of the thesis or dissertation. PhD. (Chemistry)/ M.Sc. (Physics)/ M.A. (Philosophy)/M.Com. (Finance) etc. [Unpublished]: University of Johannesburg. Retrieved from: https://ujdigispace.uj.ac.za (Accessed: Date). BP.1t/ !JviiJvJv AN ECOLOGICAL STUDY ON THE MALUTI MINNOW (PSEUDOBARBUS QUATHLAMBAE) IN THE CATCHMENT AREA OF PHASE IB OF THE LESOTHO HIGHLAND WATER SCHEME BY JOHANNESLAMBERTUSRALL THESIS SUBMIITED IN FULFILMENT OF THE DEGREE OF MASTER OF SCIENCE IN ZOOLOGY IN TIlE FACULTY OF SCIENCE AT THE RAND AFRIKAANS UNIVERSITY SUPERVISOR: DR. GJ. STEYN CO-SUPERVISOR: PROF. H.H. DU PREEZ CO·SUPERVISOR: DR. M. l\lAEMA NOVEMBER 1993 Aan my liefdevolle ouers Psalm 121: "Ek slaan my oe op na die berge: waar sal my hulp vandaan kom?" ACKNOWLEDGEMENTS * I would like to express my sincere appreciation towards my supervisors, Dr. GJ. Steyn, Professor Hein H. Du Preez and Dr. M. Maema for support, guidance, encouragement, their professional commitment to conservation and their acknowledgment of the importance of individualism. * We are indebted to our sponsors, Lesotho Highlands Development Authority, Mazda Wildlife Fund, ENGEN, and Endangered Wildlife Trust. -
Patterns of Evolution in Gobies (Teleostei: Gobiidae): a Multi-Scale Phylogenetic Investigation
PATTERNS OF EVOLUTION IN GOBIES (TELEOSTEI: GOBIIDAE): A MULTI-SCALE PHYLOGENETIC INVESTIGATION A Dissertation by LUKE MICHAEL TORNABENE BS, Hofstra University, 2007 MS, Texas A&M University-Corpus Christi, 2010 Submitted in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY in MARINE BIOLOGY Texas A&M University-Corpus Christi Corpus Christi, Texas December 2014 © Luke Michael Tornabene All Rights Reserved December 2014 PATTERNS OF EVOLUTION IN GOBIES (TELEOSTEI: GOBIIDAE): A MULTI-SCALE PHYLOGENETIC INVESTIGATION A Dissertation by LUKE MICHAEL TORNABENE This dissertation meets the standards for scope and quality of Texas A&M University-Corpus Christi and is hereby approved. Frank L. Pezold, PhD Chris Bird, PhD Chair Committee Member Kevin W. Conway, PhD James D. Hogan, PhD Committee Member Committee Member Lea-Der Chen, PhD Graduate Faculty Representative December 2014 ABSTRACT The family of fishes commonly known as gobies (Teleostei: Gobiidae) is one of the most diverse lineages of vertebrates in the world. With more than 1700 species of gobies spread among more than 200 genera, gobies are the most species-rich family of marine fishes. Gobies can be found in nearly every aquatic habitat on earth, and are often the most diverse and numerically abundant fishes in tropical and subtropical habitats, especially coral reefs. Their remarkable taxonomic, morphological and ecological diversity make them an ideal model group for studying the processes driving taxonomic and phenotypic diversification in aquatic vertebrates. Unfortunately the phylogenetic relationships of many groups of gobies are poorly resolved, obscuring our understanding of the evolution of their ecological diversity. This dissertation is a multi-scale phylogenetic study that aims to clarify phylogenetic relationships across the Gobiidae and demonstrate the utility of this family for studies of macroevolution and speciation at multiple evolutionary timescales. -
Resistance and Resilience of Murray-Darling Basin Fishes to Drought Disturbance
Resistance and Resilience of Murray- Darling Basin Fishes to Drought Disturbance Dale McNeil1, Susan Gehrig1 and Clayton Sharpe2 SARDI Publication No. F2009/000406-1 SARDI Research Report Series No. 602 SARDI Aquatic Sciences PO Box 120 Henley Beach SA 5022 April 2013 Final Report to the Murray-Darling Basin Authority - Native Fish Strategy Project MD/1086 “Ecosystem Resilience and the Role of Refugia for Native Fish Communities & Populations” McNeil et. al. 2013 Drought and Native Fish Resilience Resistance and Resilience of Murray- Darling Basin Fishes to Drought Disturbance Final Report to the Murray-Darling Basin Authority - Native Fish Strategy Project MD/1086 “Ecosystem Resilience and the Role of Refugia for Native Fish Communities & Populations” Dale McNeil1, Susan Gehrig1 and Clayton Sharpe2 SARDI Publication No. F2009/000406-1 SARDI Research Report Series No. 602 April 2013 Page | ii McNeil et. al. 2013 Drought and Native Fish Resilience This Publication may be cited as: McNeil, D. G., Gehrig, S. L. and Sharpe, C. P. (2013). Resistance and Resilience of Murray-Darling Basin Fishes to Drought Disturbance. Final Report to the Murray-Darling Basin Authority - Native Fish Strategy Project MD/1086 ―Ecosystem Resilience and the Role of Refugia for Native Fish Communities & Populations‖. South Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2009/000406-1. SARDI Research Report Series No. 602. 143pp. Front Cover Images – Lake Brewster in the Lower Lachlan River catchment, Murray-Darling Basin during extended period of zero inflows, 2007. Murray cod (Maccullochella peelii peelii), olive perchlet (Ambassis agassizii) and golden perch (Macquaria ambigua) from the, lower Lachlan River near Lake Brewster, 2007 (all images - Dale McNeil). -
Download Curriculum Vitae
Curriculum Vitae SCOTT ALLEN SCHAEFER PERSONAL Address: American Museum of Natural History e mail: [email protected] Division of Vertebrate Zoology Voice: 212-769-5652 Central Park West at 79th Street Mobile: 215-570-2943 New York, NY 10024-5192 Fax: 212-769-5642 EDUCATION Ph.D. Evolutionary Biology, University of Chicago, 1986. Faculty advisors: Dr. G.V. Lauder, Dr. R.K. Johnson Dissertation: Historical Biology of the Loricariid Catfishes: Phylogenetics and Functional Morphology M.S. Marine Science, University of South Carolina, 1982. Faculty advisor: Dr. J.M. Dean Thesis: Variability in Abundance of the Summer-Spawned Ichthyoplankton Community of North Inlet Estuary, South Carolina B.S. Zoology, Ohio State University, 1980. POSTDOCTORAL 1987-1988 Smithsonian Postdoctoral Fellow, Dept. of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution. 1986-1987 Postdoctoral Fellow in Ichthyology, Natural History Museum of Los Angeles County. PROFESSIONAL APPOINTMENTS 2015- Dean of Science for Collections, Exhibitions, and the Public Understanding of Science, American Museum of Natural History. 2010-2015 Associate Dean of Science for Collections, American Museum of Natural History. 2008- Professor, Richard Gilder Graduate School, American Museum of Natural History. 2003- Curator, American Museum of Natural History. 2001-2008 Curator-in-Charge, Dept. of Ichthyology, American Museum of Natural History. 1996-2003 Associate Curator, American Museum of Natural History. 1994-1996 Associate Curator, Academy of Natural Sciences of Philadelphia. 1991-1996 Chairman, Dept. of Ichthyology, Academy of Natural Sciences of Philadelphia. 1988-1993 Assistant Curator, Academy of Natural Sciences of Philadelphia. ACADEMIC AND ADJUNCT APPOINTMENTS 2005 External Thesis Examiner, E.R. Swartz, PhD candidate in molecular genetics, “Phylogenetics, phylogeography and evolution of the redfins (Teleostei, Cyprinidae, Pseudobarbus) from southern Africa, University of Pretoria, South Africa. -
Proceedings of the Indiana Academy of Science 1 1 8(2): 143—1 86
2009. Proceedings of the Indiana Academy of Science 1 1 8(2): 143—1 86 THE "LOST" JORDAN AND HAY FISH COLLECTION AT BUTLER UNIVERSITY Carter R. Gilbert: Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611 USA ABSTRACT. A large fish collection, preserved in ethanol and assembled by Drs. David S. Jordan and Oliver P. Hay between 1875 and 1892, had been stored for over a century in the biology building at Butler University. The collection was of historical importance since it contained some of the earliest fish material ever recorded from the states of South Carolina, Georgia, Mississippi and Kansas, and also included types of many new species collected during the course of this work. In addition to material collected by Jordan and Hay, the collection also included specimens received by Butler University during the early 1880s from the Smithsonian Institution, in exchange for material (including many types) sent to that institution. Many ichthyologists had assumed that Jordan, upon his departure from Butler in 1879. had taken the collection. essentially intact, to Indiana University, where soon thereafter (in July 1883) it was destroyed by fire. The present study confirms that most of the collection was probably transferred to Indiana, but that significant parts of it remained at Butler. The most important results of this study are: a) analysis of the size and content of the existing Butler fish collection; b) discovery of four specimens of Micropterus coosae in the Saluda River collection, since the species had long been thought to have been introduced into that river; and c) the conclusion that none of Jordan's 1878 southeastern collections apparently remain and were probably taken intact to Indiana University, where they were lost in the 1883 fire. -
Indigenous Fish Fact Sheet
FACT SHEET What a landowner should know about the INDIGENOUS FISH of the Cape Floristic Region: DIVERSITY, THREATS AND MANAGEMENT INTERVENTIONS The majority of the freshwater The Cape Floristic Region, mainly within the Western Cape Province, fish of the Cape Floristic is one of the six plant kingdoms of the world. This area, however, is Region are listed as either not only home to a remarkable number of plant species but also has a Endangered or Critically Endangered and face a very number of unique indigenous freshwater fish species. real risk of extinction! INDIGENOUS FISH are a critical component of healthy aquatic ecosystems as they form an important part of the aquatic food web and fulfill several important ecological functions. These fish need suitable habitat and good quality water, free of sediment and agrichemicals, in order to survive. The presence of indigenous fish is one of the signs of a healthy riverine Cape kurper ecosystem, making indigenous fish good bio-indicators of healthy rivers. There are four main river systems in the Western Cape, namely the Berg, Breede, Gourits and Olifants, and each system has unique fish species which only occur in ecologically healthy parts of these rivers. A good example is Burchell’s redfin in the Breede and neighbouring river systems. Genetic research on this species indicates that there could be three distinct species in the Cape galaxias Breede system. The Olifants River system is however recognised as the hotspot for indig- enous fish diversity as this system has the highest number of unique indigenous species. Research is ongoing and further genetic diversity is being uncovered for other species such as the Cape kurper and the Cape galaxias. -
Systematic Taxonomy and Biogeography of Widespread
Systematics and Biogeography of Three Widespread Australian Freshwater Fish Species. by Bernadette Mary Bostock B.Sc. (Hons) Submitted in fulfilment of the requirements for the degree of Doctor of Philosophy Deakin University February 2014 i ABSTRACT The variation within populations of three widespread and little studied Australian freshwater fish species was investigated using molecular genetic techniques. The three species that form the focus of this study are Leiopotherapon unicolor, Nematalosa erebi and Neosilurus hyrtlii, commonly recognised as the three most widespread Australian freshwater fish species, all are found in most of the major Australian drainage basins with habitats ranging from clear running water to near stagnant pools. This combination of a wide distribution and tolerance of a wide range of ecological conditions means that these species are ideally suited for use in investigating phylogenetic structure within and amongst Australian drainage basins. Furthermore, the combination of increasing aridity of the Australian continent and its diverse freshwater habitats is likely to promote population differentiation within freshwater species through the restriction of dispersal opportunities and localised adaptation. A combination of allozyme and mtDNA sequence data were employed to test the null hypothesis that Leiopotherapon unicolor represents a single widespread species. Conventional approaches to the delineation and identification of species and populations using allozyme data and a lineage-based approach using mitochondrial 16S rRNA sequences were employed. Apart from addressing the specific question of cryptic speciation versus high colonisation potential in widespread inland fishes, the unique status of L. unicolor as both Australia’s most widespread inland fish and most common desert fish also makes this a useful species to test the generality of current biogeographic hypotheses relating to the regionalisation of the Australian freshwater fish fauna.