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AUTHOR QUERIES AQ1: Please Check Whether the Edit Made to the Article Title Is Appropriate Copyedited by: AV MANUSCRIPT CATEGORY: Systematic Biology AUTHOR QUERIES AQ1: Please check whether the edit made to the article title is appropriate. AQ2: Please check that all names have been spelled correctly and appear in the correct order. Please also check that all initials are present. Please check that the author surnames (family name) have been correctly identified by a pink background. If this is incorrect, please identify the full surname of the relevant authors. Occasionally, the distinction between surnames and forenames can be ambiguous, and this is to ensure that the authors’ full surnames and forenames are tagged correctly, for accurate indexing online. Please also check all author affiliations. AQ3: Please provide department name (if any) for affiliations ‘2, 4–8, 15, 16’ and also provide full road and district address and Zip or postal code for affiliations ‘3, 4, 6, 8, 9, 11, 15’. AQ4: Please clarify whether this is “Reeder et al. 2015a” or “Reeder et al. 2015b” throughout the article. AQ5: Please check that the text is complete and that all figures, tables and their legends are included. AQ6: Please check that special characters, equations, dosages and units, if applicable, have been reproduced accurately. AQ7: Permission to reproduce any third party material in your paper should have been obtained prior to acceptance. If your paper contains figures or text that require permission to reproduce, please confirm that you have obtained all relevant permissions and that the correct permission text has been used as required by the copyright holders. Please contact [email protected] if you have any questions regarding permissions. AQ8: Please check whether the section hierarchy is OK as set. AQ9: Please spell out qPCR, MCMC, GTR, UCE (if necessary). AQ10: Please note that the unit ‘My’ has been ‘Ma’ throughout the article. Please confirm. AQ11: Please note that the Refs. [Greene 1997; Pyron 2017; and Anisimova et al. 2011] are not listed in the references list. Please add them to the list or delete the citations. AQ12: Please confirm whether the citations of Supplementary material are OK as set. AQ13: If you have submitted files to Dryad, please can you check the Dryad URL to make sure it contains the correct doi and is linked to your data package? Please confirm in the proof if it is correct or if it needs to be changed. AQ14: Please confirm whether the “Funding” section is OK as set. AQ15: Please update the missing volume number and page numbers for Ref. [Burbrink et al. 2019]. AQ16: Please confirm whether Ref. [Estes et al. 1988] is OK as set.’ AQ17: There is no mention of Ref. [Fry 2005] in the text. Please insert a citation in the text or delete the reference as appropriate. AQ18: Please provide complete details for Refs. [Gao and Norell 1998; Kuhn 2008; Rhodin et al. 2015]. AQ19: Please provide the missing volume number for Refs. [Minh et al. 2018; Robinson and Foulds 1981]. AQ20: Please provide the missing publisher name and publisher location for Ref. [R Core Team 2015]. AQ21: Please provide the missing publisher location for Ref. [Zhang 2010]. AQ22: If applicable figures have been placed as close as possible to their first citation. Please check that they are complete and that the correct figure legend is present. Figures in the proof are low resolution versions that will be replaced with high resolution versions when the journal is printed. AQ23: This figure is currently intended to appear in color online and black and white in print. Please check the black and white versions at the end of the proof, and if necessary, re-word the text and legend to avoid references to color. 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[18:22 24/9/2019 Sysbio-OP-SYSB190063.tex] Page: 3 1–19 Copyedited by: AV MANUSCRIPT CATEGORY: Systematic Biology Syst. Biol. 0(0):1–19, 2019 © The Author(s) 2019. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For permissions, please email: [email protected] DOI:10.1093/sysbio/syz062 AQ1 Interrogating Genomic-Scale Data for Squamata (Lizards, Snakes, and Amphisbaenians) Show no Support for Key Traditional Morphological Relationships , FRANK T. BURBRINK1,FELIPE G. GRAZZIOTIN2,R.ALEXANDER PYRON3,DAV I D CUNDALL4,STEVE DONNELLAN5 6,FRANCES AQ2 IRISH7,J.SCOTT KEOGH8,FRED KRAUS9,ROBERT W.
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