Betaine Chemistry, Roles, and Potential Use in Liver Disease
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Compositions and Methods for Selective Delivery of Oligonucleotide Molecules to Specific Neuron Types
(19) TZZ ¥Z_T (11) EP 2 380 595 A1 (12) EUROPEAN PATENT APPLICATION (43) Date of publication: (51) Int Cl.: 26.10.2011 Bulletin 2011/43 A61K 47/48 (2006.01) C12N 15/11 (2006.01) A61P 25/00 (2006.01) A61K 49/00 (2006.01) (2006.01) (21) Application number: 10382087.4 A61K 51/00 (22) Date of filing: 19.04.2010 (84) Designated Contracting States: • Alvarado Urbina, Gabriel AT BE BG CH CY CZ DE DK EE ES FI FR GB GR Nepean Ontario K2G 4Z1 (CA) HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL • Bortolozzi Biassoni, Analia Alejandra PT RO SE SI SK SM TR E-08036, Barcelona (ES) Designated Extension States: • Artigas Perez, Francesc AL BA ME RS E-08036, Barcelona (ES) • Vila Bover, Miquel (71) Applicant: Nlife Therapeutics S.L. 15006 La Coruna (ES) E-08035, Barcelona (ES) (72) Inventors: (74) Representative: ABG Patentes, S.L. • Montefeltro, Andrés Pablo Avenida de Burgos 16D E-08014, Barcelon (ES) Edificio Euromor 28036 Madrid (ES) (54) Compositions and methods for selective delivery of oligonucleotide molecules to specific neuron types (57) The invention provides a conjugate comprising nucleuc acid toi cell of interests and thus, for the treat- (i) a nucleic acid which is complementary to a target nu- ment of diseases which require a down-regulation of the cleic acid sequence and which expression prevents or protein encoded by the target nucleic acid as well as for reduces expression of the target nucleic acid and (ii) a the delivery of contrast agents to the cells for diagnostic selectivity agent which is capable of binding with high purposes. -
GAT-1, a High-Affinity GABA Plasma Membrane Transporter, Localized to Neurons and Astroglia in the Cerebral Cortex
The Journal of Neuroscience, November 1995, 75(11): 7734-7746 GAT-1, a High-Affinity GABA Plasma Membrane Transporter, Localized to Neurons and Astroglia in the Cerebral Cortex Andrea Minelli,’ Nicholas C. Brecha, 2,3,4,5,6Christine Karschiq7 Silvia DeBiasi,8 and Fiorenzo Conti’ ‘Institute of Human Physiology, University of Ancona, Ancona, Italy, *Department of Neurobiology, 3Department of Medicine, 4Brain Research Institute, and 5CURE:VA/UCLA Gastroenteric Biology Center, UCLA School of Medicine, and 6Veterans Administration Medical Center, Los Angeles, CA, 7Max-Planck-lnstitute for Experimental Medicine, Gottingen, Germany, and 8Department of General Physiology and Biochemistry, Section of Histology and Human Anatomy, University of Milan, Milan, Italy High affinity, GABA plasma membrane transporters influ- into GABAergic axon terminals, GAT-1 influences both ex- ence the action of GABA, the main inhibitory neurotrans- citatory and inhibitory transmission by modulating the mitter. The cellular expression of GAT-1, a prominent “paracrine” spread of GABA (Isaacson et al., 1993), and GABA transporter, has been investigated in the cerebral suggest that astrocytes may play an important role in this cortex of adult rats using in situ hybridizaton with %-la- process. beled RNA probes and immunocytochemistry with affinity [Key words: GABA, GABA transporlers, neocottex, syn- purified polyclonal antibodies directed to the C-terminus of apses, neurons, astrocytes] rat GAT-1. GAT-1 mRNA was observed in numerous neurons and in Synaptic transmissionmediated by GABA plays a key role in some glial cells. Double-labeling experiments were per- controlling neuronal activity and information processingin the formed to compare the pattern of GAT-1 mRNA containing mammaliancerebral cortex (Krnjevic, 1984; Sillito, 1984; Mc- and GAD67 immunoreactive cells. -
Beneficial Effects of Betaine: a Comprehensive Review
biology Review Beneficial Effects of Betaine: A Comprehensive Review Madan Kumar Arumugam 1,2 , Matthew C. Paal 1,2, Terrence M. Donohue Jr. 1,2,3, Murali Ganesan 1,2, Natalia A. Osna 1,2 and Kusum K. Kharbanda 1,2,3,* 1 Research Service, Veterans Affairs Nebraska-Western Iowa Health Care System, Omaha, NE 68105, USA; [email protected] (MK.A.); [email protected] (M.C.P.); [email protected] (T.M.D.J.); [email protected] (M.G.); [email protected] (N.A.O.) 2 Department of Internal Medicine, University of Nebraska Medical Center, Omaha, NE 68198, USA 3 Department of Biochemistry & Molecular Biology, University of Nebraska Medical Center, Omaha, NE 68198, USA * Correspondence: [email protected]; Tel.: +1-402-995-3752; Fax: +1-402-995-4600 Simple Summary: A large number of studies report that medicinal herbs and many food ingredients protect against the development of liver disease because they possess antioxidant, anti-inflammatory, or anti-necrotic activities. This review focuses on the biological and beneficial effects of dietary betaine (trimethylglycine), a naturally occurring and crucial methyl donor, that restores methionine homeostasis in cells. We describe recent studies on betaine’s mechanism(s) of action as a therapeutic agent for improving indices of alcohol-induced and metabolic- associated liver disease. Due to its low cost, high tolerability, and efficacy, we suggest betaine as a promising therapeutic for clinical use to treat these aforementioned diseases as well as other liver-/non-liver-related diseases and conditions. Abstract: Medicinal herbs and many food ingredients possess favorable biological properties that contribute to their therapeutic activities. -
Control of Choline Oxidation in Rat Kidney Mitochondria
ÔØ ÅÒÙ×Ö ÔØ Control of Choline Oxidation in Rat Kidney Mitochondria Niaobh O’Donoghue, Trevor Sweeney, Robin Donagh, Kieran Clarke, Richard K. Porter PII: S0005-2728(09)00144-3 DOI: doi:10.1016/j.bbabio.2009.04.014 Reference: BBABIO 46295 To appear in: BBA - Bioenergetics Received date: 11 March 2009 Revised date: 27 April 2009 Accepted date: 29 April 2009 Please cite this article as: Niaobh O’Donoghue, Trevor Sweeney, Robin Donagh, Kieran Clarke, Richard K. Porter, Control of Choline Oxidation in Rat Kidney Mitochondria, BBA - Bioenergetics (2009), doi:10.1016/j.bbabio.2009.04.014 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. ACCEPTED MANUSCRIPT Control of Choline Oxidation in Rat Kidney Mitochondria Niaobh O’Donoghue, Trevor Sweeney, Robin Donagh, Kieran Clarke and Richard K. Porter * School of Biochemistry and Immunology, Trinity College Dublin, Dublin 2 Ireland. *Correspondence to: Richard K. Porter, School of Biochemistry and Immunology, Trinity College Dublin, Dublin 2 Ireland. Tel. +353-1-8961617; Fax +353-1-6772400; Email: [email protected] Key words: choline, betaine, mitochondria, osmolyte, kidney, transporter ACCEPTED MANUSCRIPT Abbreviations: EGTA, ethylenebis(oxethylenenitrilo)tetraacetic acid; FCCP, carbonyl cyanide p-trifluoromethoxyphenylhyrazone; HEPES, 4-(2- hydroxyethyl)-1-peiperazine-ethanesulfonic acid; MOPS, (3-[N}- morphilino)propane sulphonic acid; TPMP, methyltriphenylphosphonium 1 ACCEPTED MANUSCRIPT ABSTRACT Choline is a quaternary amino cationic organic alcohol that is oxidized to betaine in liver and kidney mitochondria. -
Structure-Guided Function Discovery of an NRPS-Like Glycine Betaine Reductase for Choline Biosynthesis in Fungi
Structure-guided function discovery of an NRPS-like glycine betaine reductase for choline biosynthesis in fungi Yang Hai (海洋)a, Arthur M. Huangb, and Yi Tanga,b,1 aDepartment of Chemical and Biomolecular Engineering, University of California, Los Angeles, CA 90095; and bDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095 Edited by Wilfred A. van der Donk, Howard Hughes Medical Institute and University of Illinois, Urbana–Champaign, Urbana, IL, and accepted by Editorial Board Member Stephen J. Benkovic April 10, 2019 (received for review February 27, 2019) Nonribosomal peptide synthetases (NRPSs) and NRPS-like enzymes focused on a fungal CAR-like protein with an unknown function. It have diverse functions in primary and secondary metabolisms. By is distinguished from all other CARs due to an extra C-terminal using a structure-guided approach, we uncovered the function of a YdfG-like short-chain dehydrogenase/reductase domain. We NRPS-like enzyme with unusual domain architecture, catalyzing named this protein ATRR and the corresponding gene atrr after its two sequential two-electron reductions of glycine betaine to choline. unusual domain architecture (A-T-R1-R2). The presence of two Structural analysis based on the homology model suggests cation-π fused R domains in ATRR implies that it could catalyze two con- interactions as the major substrate specificity determinant, which was secutive two-electron reductions of a carboxylic acid to yield an verified using substrate analogs and inhibitors. Bioinformatic analysis alcohol (Fig. 1B). Moreover, a genomic survey reveals that atrr indicates this NRPS-like glycine betaine reductase is highly conserved genes are widespread but exclusive to eukaryotes, mostly in fungi and widespread in kingdom fungi. -
The Opu Family of Compatible Solute Transporters from Bacillus Subtilis
Biol. Chem. 2017; 398(2): 193–214 Review Tamara Hoffmann and Erhard Bremer* Guardians in a stressful world: the Opu family of compatible solute transporters from Bacillus subtilis DOI 10.1515/hsz-2016-0265 Received August 8, 2016; accepted August 29, 2016; previously Introduction published online December 8, 2016 Bacillus subtilis, the model organism for Gram-positive Abstract: The development of a semi-permeable cyto- bacteria, is ubiquitously distributed in the environment, plasmic membrane was a key event in the evolution of and can be found in terrestrial, in plant-associated, and in microbial proto-cells. As a result, changes in the exter- marine ecoystems (Earl et al., 2008; Mandic-Mulec et al., nal osmolarity will inevitably trigger water fluxes along 2015). One of its main habitats is the upper layer of the the osmotic gradient. The ensuing osmotic stress has soil. The functional annotation of its 4.2 Mbp genome consequences for the magnitude of turgor and will nega- sequence (Barbe et al., 2009) shows that it is well adapted tively impact cell growth and integrity. No microorganism to life in this habitat through an abundance of uptake and can actively pump water across the cytoplasmic mem- catabolic systems allowing it to take advantage of many brane; hence, microorganisms have to actively adjust the plant-derived compounds for growth (Belda et al., 2013). B. osmotic potential of their cytoplasm to scale and direct subtilis can exist in the soil as motile cells, actively seeking water fluxes in order to prevent dehydration or -
Human Breast Cancer Metastases to the Brain Display Gabaergic Properties in the Neural Niche
Human breast cancer metastases to the brain display GABAergic properties in the neural niche Josh Nemana, John Terminib, Sharon Wilczynskic, Nagarajan Vaidehid, Cecilia Choya,e, Claudia M. Kowolikc, Hubert Lid,e, Amanda C. Hambrechta,f, Eugene Robertsg,1, and Rahul Jandiala,f,1 Divisions of aNeurosurgery and cPathology, Departments of bMolecular Medicine, dImmunology, and gNeurobiochemistry, and eIrell and Manella Graduate School of Biological Sciences, City of Hope, Duarte, CA 91010; and fDepartment of Biology, University of Southern California, Los Angeles, CA 90089 Contributed by Eugene Roberts, November 27, 2013 (sent for review October 16, 2013) Dispersion of tumors throughout the body is a neoplastic process secondary sites (10–14). We previously showed that metastatic responsible for the vast majority of deaths from cancer. Despite cells have the ability to alter the cellular milieu of the brain disseminating to distant organs as malignant scouts, most tumor for growth advantage (3). cells fail to remain viable after their arrival. The physiologic mi- γ-Aminobutyric acid (GABA) was first identified in the croenvironment of the brain must become a tumor-favorable mi- mammalian brain over one-half a century ago and subsequent croenvironment for successful metastatic colonization by circulating studies have demonstrated its relevance to various medical and breast cancer cells. Bidirectional interplay of breast cancer cells and scientific paradigms (15–18). In addition to its role in neuro- native brain cells in metastasis is poorly understood and rarely transmission, GABA can act as a trophic factor during nervous studied. We had the rare opportunity to investigate uncommonly system development to influence cellular events including pro- available specimens of matched fresh breast-to-brain metastases liferation, migration, differentiation, synapse maturation, and tissue and derived cells from patients undergoing neurosurgical re- cell death (19, 20). -
Leprot1, a Transporter for Proline, Glycine Betaine, and -Amino Butyric
The Plant Cell, Vol. 11, 377–391, March 1999, www.plantcell.org © 1999 American Society of Plant Physiologists LeProT1, a Transporter for Proline, Glycine Betaine, and g-Amino Butyric Acid in Tomato Pollen Rainer Schwacke,a Silke Grallath,a Kevin E. Breitkreuz,a,b Elke Stransky,a Harald Stransky,a Wolf B. Frommer,a and Doris Rentsch a,1 a Plant Physiology, Zentrum für Molekularbiologie der Pflanzen, University of Tübingen, Auf der Morgenstelle 1, D-72076 Tübingen, Germany b Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1, Canada During maturation, pollen undergoes a period of dehydration accompanied by the accumulation of compatible solutes. Solute import across the pollen plasma membrane, which occurs via proteinaceous transporters, is required to support pollen development and also for subsequent germination and pollen tube growth. Analysis of the free amino acid com- position of various tissues in tomato revealed that the proline content in flowers was 60 times higher than in any other organ analyzed. Within the floral organs, proline was confined predominantly to pollen, where it represented .70% of total free amino acids. Uptake experiments demonstrated that mature as well as germinated pollen rapidly take up pro- line. To identify proline transporters in tomato pollen, we isolated genes homologous to Arabidopsis proline transport- ers. LeProT1 was specifically expressed both in mature and germinating pollen, as demonstrated by RNA in situ hybridization. Expression in a yeast mutant demonstrated that LeProT1 transports proline and g-amino butyric acid with low affinity and glycine betaine with high affinity. Direct uptake and competition studies demonstrate that LeProT1 constitutes a general transporter for compatible solutes. -
Betaine Analogues and Related Compounds For
BETAINE ANALOGUES AND RELATED COMPOUNDS FOR BIOMEDICAL APPLICATIONS A thesis presented in fulfilment of the requirement for the degree of Doctor of Philosophy in Chemical and Process Engineering at the University of Canterbury Madhusudan Vasudevamurthy 2006 Department of Chemical and Process Engineering University of Canterbury Christchurch, New Zealand Acknowledgements I owe a debt of gratitude to my supervisor, Dr. Michael Lever for being the force behind this project. He has been my guiding star and a great mentor. His probing questions, enthusiasm to do things right and constantly finding new ways of functioning to resolve a problem was contagious. His humor and never ending discussions were a source of encouragement making him a great friend and confidant. The contribution of my supervisor Dr. Ken Morison is most appreciated. His continual support and guidance during the last couple of years has added immense value to my thesis. His invaluable suggestions, an eagerness to learn and implement has brought about the shape of this thesis. I am deeply indebted to Prof. Peter George and Prof. Steve Chambers for their valuable inputs and suggestions in this thesis. Their willingness to support and accommodate me in their hectic schedule is most appreciated. I am glad of this opportunity to extend my gratitude to Prof. Laurence Weatherley, my previous supervisor, whose encouragement and words of wisdom motivated me to pursue my PhD. His continual support helped me in the founding years of my thesis, opening doors to a wealth of knowledge and a thirst for learning more. His motivation has made me a scientist from an amateur. -
Pflügers Archiv : European Journal of Physiology, 466(1):25-42
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2014 The SLC6 transporters: perspectives on structure, functions, regulation, and models for transporter dysfunction Rudnick, Gary ; Krämer, Reinhard ; Blakely, Randy D ; Murphy, Dennis L ; Verrey, Francois Abstract: The human SLC6 family is composed of approximately 20 structurally related symporters (co- transporters) that use the transmembrane electrochemical gradient to actively import their substrates into cells. Approximately half of the substrates of these transporters are amino acids, with others transporting biogenic amines and/or closely related compounds, such as nutrients and compatible osmolytes. In this short review, five leaders in the field discuss a number of currently important research themesthat involve SLC6 transporters, highlighting the integrative role they play across a wide spectrum of different functions. The first essay, by Gary Rudnick, describes the molecular mechanism of their coupled transport which is being progressively better understood based on new crystal structures, functional studies, and modeling. Next, the question of multiple levels of transporter regulation is discussed by Reinhard Krämer, in the context of osmoregulation and stress response by the related bacterial betaine transporter BetP. The role of selected members of the human SLC6 family that function as nutrient amino acid transporters is then reviewed by François Verrey. He discusses how some of these transporters mediate the active uptake of (essential) amino acids into epithelial cells of the gut and the kidney tubule to support systemic amino acid requirements, whereas others are expressed in specific cells to support their specialized metabolism and/or growth. -
Molecular Cloning and Structural Analysis of Human Nore- Pinephrine Transporter Gene(NETHG)1
Cell Research(1995),5,93—100 Molecular cloning and structural analysis of human nore- pinephrine transporter gene(NETHG)1 GUO LIHE*, LIHUA ZHU**, FANG* HUANG, ANTHONY CW TAM**, ZENGCHAN YE**, JIAN FEI*, XIAOYONG ZHANG*, DOMINIC MAN-KIT LAM***2 * Shanghai Institute of Cell Biology, Chinese Academy of Sciences, Shanghai 200031, China. ** Hong Kong Institute of Biotechnology, Shatin, NT, Hong Kong (Hong Kong). *** LifeTech Industries Ltd., 100 Hawthorn Road, Conroe, Texas 77301, USA. ABSTRACT A cDNA molecule encoding a major part of the hu- man Norepinephrine transporter(hNET) was synthesized by means of Polymerase Chain Reaction(PCR) technique and used as a probe for selecting the human genomic NET gene. A positive clone harbouring the whole gene was ob- tained from a human lymphocyte genomic library through utilizing the“genomic walking”technique. The clone, des- ignated as phNET, harbours a DNA fragment of about 59 kb in length inserted into BamH I site in cosmid pWE15. The genomic clone contains 14 exons encoding all amino acid residues in the protein. A single exon encodes a dis- tinct transmembrane domain, except for transmembrane domain 10 and 11, which are encoded by part of two ex- ons respectively, and exon 12, which encodes part of do- main 11 and all of domain 12. These results imply that there is a close relationship between exon splicing of a gene and structural domains of the protein, as is the case for the human γ-aminobutyric acid transporter(hGAT) and a number of other membrane proteins. Key words: Human norepinephrine transporter gene, neurotransmitter uptake, cloning. 1. -
Betaine Supplementation for Various Clinical Disorders
Online - 2455-3891 Vol 10, Issue 10, 2017 Print - 0974-2441 Review Article BETAINE SUPPLEMENTATION FOR VARIOUS CLINICAL DISORDERS JAYALAKSHMI M, VANITHA V* Department of Biochemistry, School of Life Sciences, Vels University, Chennai - 600 117, Tamil Nadu, India. Email: [email protected] Received: 21 February 2017, Revised and Accepted: 24 March 2017 ABSTRACT Betaine is distributed widely in animals, plants, and microorganisms and rich dietary sources include seafood, especially marine invertebrates. Betaine is N-trimethylated amino acid called as glycine betaine. It is a by-product. Betaine aldehyde is produced when choline dehydrogenase acts on choline, then betaine aldehyde is oxidized to form betaine by aldehyde dehydrogenase. Metabolic derived betaines possess various functions in our body in which they act as methyl donor which helps in liver function, detoxication, and cellular functions. It plays an important role in fat metabolism. Recent research found that betaine can convert homocysteine to cysteine thus they prevent heart disease. Choline is oxidized to betaine in liver and kidney. Intracellular betaine serves as an osmolyte that regulates cell volume and tissue integrity. Betaine not only plays as an osmolyte but also play a major role in the protection of the liver and other tissues. Consequently, it has been proposed that betaine has significant nutrient for prevention of chronic disease. Betaine has been shown to protect internal organs, improve vascular risk factors, and enhance performance. Databases of betaine content in food are being developed for correlation with population health studies. This review focuses on the aspects of wide research field with emphasis on a recent data relevant to various human diseases.