(1): Valence Bond Theory VSEPR → Predicts the 3-Dimensional Molecular
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Structure and Bonding Electron Configurations in the Periodic Table
Structure and Bonding The study of organic chemistry must at some point extend to the molecular level, for the physical and chemical properties of a substance are ultimately explained in terms of the structure and bonding of molecules. This module introduces some basic facts and principles that are needed for a discussion of organic molecules. Electronic Configurations Electron Configurations in the Periodic Table 1A 2A 3A 4A 5A 6A 7A 8A 1 2 H He 1 2 1s 1s 3 4 5 6 7 8 9 10 Li Be B C N O F Ne 2 2 2 2 2 2 2 2 1s 1s 1s 1s 1s 1s 1s 1s 2s1 2s2 2s22p1 2s22p2 2s22p3 2s22p4 2s22p5 2s22p6 11 12 13 14 15 16 17 18 Na Mg Al Si P S Cl Ar [Ne] [Ne] [Ne] [Ne] [Ne] [Ne] [Ne] [Ne] 3s1 3s2 3s23p1 3s23p2 3s23p3 3s23p4 3s23p5 3s23p6 Four elements, hydrogen, carbon, oxygen and nitrogen, are the major components of most organic compounds. Consequently, our understanding of organic chemistry must have, as a foundation, an appreciation of the electronic structure and properties of these elements. The truncated periodic table shown above provides the orbital electronic structure for the first eighteen elements (hydrogen through argon). According to the Aufbau principle, the electrons of an atom occupy quantum levels or orbitals starting from the lowest energy level, and proceeding to the highest, with each orbital holding a maximum of two paired electrons (opposite spins). Electron shell #1 has the lowest energy and its s-orbital is the first to be filled. -
VSEPR Theory
VSEPR Theory The valence-shell electron-pair repulsion (VSEPR) model is often used in chemistry to predict the three dimensional arrangement, or the geometry, of molecules. This model predicts the shape of a molecule by taking into account the repulsion between electron pairs. This handout will discuss how to use the VSEPR model to predict electron and molecular geometry. Here are some definitions for terms that will be used throughout this handout: Electron Domain – The region in which electrons are most likely to be found (bonding and nonbonding). A lone pair, single, double, or triple bond represents one region of an electron domain. H2O has four domains: 2 single bonds and 2 nonbonding lone pairs. Electron Domain may also be referred to as the steric number. Nonbonding Pairs Bonding Pairs Electron domain geometry - The arrangement of electron domains surrounding the central atom of a molecule or ion. Molecular geometry - The arrangement of the atoms in a molecule (The nonbonding domains are not included in the description). Bond angles (BA) - The angle between two adjacent bonds in the same atom. The bond angles are affected by all electron domains, but they only describe the angle between bonding electrons. Lewis structure - A 2-dimensional drawing that shows the bonding of a molecule’s atoms as well as lone pairs of electrons that may exist in the molecule. Provided by VSEPR Theory The Academic Center for Excellence 1 April 2019 Octet Rule – Atoms will gain, lose, or share electrons to have a full outer shell consisting of 8 electrons. When drawing Lewis structures or molecules, each atom should have an octet. -
Transcription 12.02.15
Lecture 12A • 02/15/12 We’re going to continue our discussion of conjugation. If we go back and talk about electrons and how they act like waves, [there’s] something known as the particle in a box. You’ve got some kind of box where imagine that the walls are infinitely tall. It’s a one-dimensional system, where the electron, all it can do, is go left and right between the two walls of the box. The electron’s a wave; it can’t exist outside the box, so whatever function, whatever wave we use to describe the electron, has to have a value of zero at one end of the box and zero at the other end of the box. Graphically, what do the solutions look like? We have something like this, where we’re talking about energy potential; it’s infinite at either end of the box, and zero in between. We have an electron that’s bouncing around inside of it. An electron’s a wave, and there’s function that describes that wave. The only way it can fit in this box and physically make sense is if the wave starts and stops and the ends of the box. It turns out that – long, long, long story short – one of the solutions for the Schrödinger equation is just a sine function – actually, it’s part of an exponential version of a sine function. It’s something, at least, we can draw a pretty picture of. That’s why you’ll start with this problem in a discussion of quantum mechanics, because it is solvable, it is only on in dimension, and it’s more humanly possible to discuss. -
Aromaticity Sem- Ii
AROMATICITY SEM- II In 1931, German chemist and physicist Sir Erich Hückel proposed a theory to help determine if a planar ring molecule would have aromatic properties .This is a very popular and useful rule to identify aromaticity in monocyclic conjugated compound. According to which a planar monocyclic conjugated system having ( 4n +2) delocalised (where, n = 0, 1, 2, .....) electrons are known as aromatic compound . For example: Benzene, Naphthalene, Furan, Pyrrole etc. Criteria for Aromaticity 1) The molecule is cyclic (a ring of atoms) 2) The molecule is planar (all atoms in the molecule lie in the same plane) 3) The molecule is fully conjugated (p orbitals at every atom in the ring) 4) The molecule has 4n+2 π electrons (n=0 or any positive integer Why 4n+2π Electrons? According to Hückel's Molecular Orbital Theory, a compound is particularly stable if all of its bonding molecular orbitals are filled with paired electrons. - This is true of aromatic compounds, meaning they are quite stable. - With aromatic compounds, 2 electrons fill the lowest energy molecular orbital, and 4 electrons fill each subsequent energy level (the number of subsequent energy levels is denoted by n), leaving all bonding orbitals filled and no anti-bonding orbitals occupied. This gives a total of 4n+2π electrons. - As for example: Benzene has 6π electrons. Its first 2π electrons fill the lowest energy orbital, and it has 4π electrons remaining. These 4 fill in the orbitals of the succeeding energy level. The criteria for Antiaromaticity are as follows: 1) The molecule must be cyclic and completely conjugated 2) The molecule must be planar. -
8.3 Bonding Theories >
8.3 Bonding Theories > Chapter 8 Covalent Bonding 8.1 Molecular Compounds 8.2 The Nature of Covalent Bonding 8.3 Bonding Theories 8.4 Polar Bonds and Molecules 1 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Molecular Orbitals How are atomic and molecular orbitals related? 2 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals • The model you have been using for covalent bonding assumes the orbitals are those of the individual atoms. • There is a quantum mechanical model of bonding, however, that describes the electrons in molecules using orbitals that exist only for groupings of atoms. 3 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals • When two atoms combine, this model assumes that their atomic orbitals overlap to produce molecular orbitals, or orbitals that apply to the entire molecule. 4 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Just as an atomic orbital belongs to a particular atom, a molecular orbital belongs to a molecule as a whole. • A molecular orbital that can be occupied by two electrons of a covalent bond is called a bonding orbital. 5 Copyright © Pearson Education, Inc., or its affiliates. All Rights Reserved. 8.3 Bonding Theories > Molecular Orbitals Sigma Bonds When two atomic orbitals combine to form a molecular orbital that is symmetrical around the axis connecting two atomic nuclei, a sigma bond is formed. • Its symbol is the Greek letter sigma (σ). -
Molecular Orbital Theory
Molecular Orbital Theory The Lewis Structure approach provides an extremely simple method for determining the electronic structure of many molecules. It is a bit simplistic, however, and does have trouble predicting structures for a few molecules. Nevertheless, it gives a reasonable structure for many molecules and its simplicity to use makes it a very useful tool for chemists. A more general, but slightly more complicated approach is the Molecular Orbital Theory. This theory builds on the electron wave functions of Quantum Mechanics to describe chemical bonding. To understand MO Theory let's first review constructive and destructive interference of standing waves starting with the full constructive and destructive interference that occurs when standing waves overlap completely. When standing waves only partially overlap we get partial constructive and destructive interference. To see how we use these concepts in Molecular Orbital Theory, let's start with H2, the simplest of all molecules. The 1s orbitals of the H-atom are standing waves of the electron wavefunction. In Molecular Orbital Theory we view the bonding of the two H-atoms as partial constructive interference between standing wavefunctions of the 1s orbitals. The energy of the H2 molecule with the two electrons in the bonding orbital is lower by 435 kJ/mole than the combined energy of the two separate H-atoms. On the other hand, the energy of the H2 molecule with two electrons in the antibonding orbital is higher than two separate H-atoms. To show the relative energies we use diagrams like this: In the H2 molecule, the bonding and anti-bonding orbitals are called sigma orbitals (σ). -
Chemical Bonding & Chemical Structure
Chemistry 201 – 2009 Chapter 1, Page 1 Chapter 1 – Chemical Bonding & Chemical Structure ings from inside your textbook because I normally ex- Getting Started pect you to read the entire chapter. 4. Finally, there will often be a Supplement that con- If you’ve downloaded this guide, it means you’re getting tains comments on material that I have found espe- serious about studying. So do you already have an idea cially tricky. Material that I expect you to memorize about how you’re going to study? will also be placed here. Maybe you thought you would read all of chapter 1 and then try the homework? That sounds good. Or maybe you Checklist thought you’d read a little bit, then do some problems from the book, and just keep switching back and forth? That When you have finished studying Chapter 1, you should be sounds really good. Or … maybe you thought you would able to:1 go through the chapter and make a list of all of the impor- tant technical terms in bold? That might be good too. 1. State the number of valence electrons on the following atoms: H, Li, Na, K, Mg, B, Al, C, Si, N, P, O, S, F, So what point am I trying to make here? Simply this – you Cl, Br, I should do whatever you think will work. Try something. Do something. Anything you do will help. 2. Draw and interpret Lewis structures Are some things better to do than others? Of course! But a. Use bond lengths to predict bond orders, and vice figuring out which study methods work well and which versa ones don’t will take time. -
Inorganic Chemistry/Chemical Bonding/MO Diagram 1
Inorganic Chemistry/Chemical Bonding/MO Diagram 1 Inorganic Chemistry/Chemical Bonding/MO Diagram A molecular orbital diagram or MO diagram for short is a qualitative descriptive tool explaining chemical bonding in molecules in terms of molecular orbital theory in general and the Linear combination of atomic orbitals molecular orbital method (LCAO method) in particular [1] [2] [3] . This tool is very well suited for simple diatomic molecules such as dihydrogen, dioxygen and carbon monoxide but becomes more complex when discussing polynuclear molecules such as methane. It explains why some molecules exist and not others, how strong bonds are, and what electronic transitions take place. Dihydrogen MO diagram The smallest molecule, hydrogen gas exists as dihydrogen (H-H) with a single covalent bond between two hydrogen atoms. As each hydrogen atom has a single 1s atomic orbital for its electron, the bond forms by overlap of these two atomic orbitals. In figure 1 the two atomic orbitals are depicted on the left and on the right. The vertical axis always represents the orbital energies. The atomic orbital energy correlates with electronegativity as a more electronegative atom holds an electron more tightly thus lowering its energy. MO treatment is only valid when the atomic orbitals have comparable energy; when they differ greatly the mode of bonding becomes ionic. Each orbital is singly occupied with the up and down arrows representing an electron. The two AO's can overlap in two ways depending on their phase relationship. The phase of an orbital is a direct consequence of the oscillating, wave-like properties of electrons. -
Electron Configurations, Orbital Notation and Quantum Numbers
5 Electron Configurations, Orbital Notation and Quantum Numbers Electron Configurations, Orbital Notation and Quantum Numbers Understanding Electron Arrangement and Oxidation States Chemical properties depend on the number and arrangement of electrons in an atom. Usually, only the valence or outermost electrons are involved in chemical reactions. The electron cloud is compartmentalized. We model this compartmentalization through the use of electron configurations and orbital notations. The compartmentalization is as follows, energy levels have sublevels which have orbitals within them. We can use an apartment building as an analogy. The atom is the building, the floors of the apartment building are the energy levels, the apartments on a given floor are the orbitals and electrons reside inside the orbitals. There are two governing rules to consider when assigning electron configurations and orbital notations. Along with these rules, you must remember electrons are lazy and they hate each other, they will fill the lowest energy states first AND electrons repel each other since like charges repel. Rule 1: The Pauli Exclusion Principle In 1925, Wolfgang Pauli stated: No two electrons in an atom can have the same set of four quantum numbers. This means no atomic orbital can contain more than TWO electrons and the electrons must be of opposite spin if they are to form a pair within an orbital. Rule 2: Hunds Rule The most stable arrangement of electrons is one with the maximum number of unpaired electrons. It minimizes electron-electron repulsions and stabilizes the atom. Here is an analogy. In large families with several children, it is a luxury for each child to have their own room. -
Structure of Benzene, Orbital Picture, Resonance in Benzene, Aromatic Characters, Huckel’S Rule B
Dr.Mrityunjay Banerjee, IPT, Salipur B PHARM 3rd SEMESTER BP301T PHARMACEUTICAL ORGANIC CHEMISTRY –II UNIT I UNIT I Benzene and its derivatives 10 Hours A. Analytical, synthetic and other evidences in the derivation of structure of benzene, Orbital picture, resonance in benzene, aromatic characters, Huckel’s rule B. Reactions of benzene - nitration, sulphonation, halogenationreactivity, Friedelcrafts alkylation- reactivity, limitations, Friedelcrafts acylation. C. Substituents, effect of substituents on reactivity and orientation of mono substituted benzene compounds towards electrophilic substitution reaction D. Structure and uses of DDT, Saccharin, BHC and Chloramine Benzene and its Derivatives Chemists have found it useful to divide all organic compounds into two broad classes: aliphatic compounds and aromatic compounds. The original meanings of the words "aliphatic" (fatty) and "aromatic" (fragrant/ pleasant smell). Aromatic compounds are benzene and compounds that resemble benzene in chemical behavior. Aromatic properties are those properties of benzene that distinguish it from aliphatic hydrocarbons. Benzene: A liquid that smells like gasoline Boils at 80°C & Freezes at 5.5°C It was formerly used to decaffeinate coffee and component of many consumer products, such as paint strippers, rubber cements, and home dry-cleaning spot removers. A precursor in the production of plastics (such as Styrofoam and nylon), drugs, detergents, synthetic rubber, pesticides, and dyes. It is used as a solvent in cleaning and maintaining printing equipment and for adhesives such as those used to attach soles to shoes. Benzene is a natural constituent of petroleum products, but because it is a known carcinogen, its use as an additive in gasoline is now limited. In 1970s it was associated with leukemia deaths. -
Alkenes and Alkynes
02/21/2019 CHAPTER FOUR Alkenes and Alkynes H N O I Cl C O C O Cl F3C C Cl C Cl Efavirenz Haloprogin (antiviral, AIDS therapeutic) (antifungal, antiseptic) Chapter 4 Table of Content * Unsaturated Hydrocarbons * Introduction and hybridization * Alkenes and Alkynes * Benzene and Phenyl groups * Structure of Alkenes, cis‐trans Isomerism * Nomenclature of Alkenes and Alkynes * Configuration cis/trans, and cis/trans Isomerism * Configuration E/Z * Physical Properties of Hydrocarbons * Acid‐Base Reactions of Hydrocarbons * pka and Hybridizations 1 02/21/2019 Unsaturated Hydrocarbons • Unsaturated Hydrocarbon: A hydrocarbon that contains one or more carbon‐carbon double or triple bonds or benzene‐like rings. – Alkene: contains a carbon‐carbon double bond and has the general formula CnH2n. – Alkyne: contains a carbon‐carbon triple bond and has the general formula CnH2n‐2. Introduction Alkenes ● Hydrocarbons containing C=C ● Old name: olefins • Steroids • Hormones • Biochemical regulators 2 02/21/2019 • Alkynes – Hydrocarbons containing C≡C – Common name: acetylenes Unsaturated Hydrocarbons • Arene: benzene and its derivatives (Ch 9) 3 02/21/2019 Benzene and Phenyl Groups • We do not study benzene and its derivatives until Chapter 9. – However, we show structural formulas of compounds containing a phenyl group before that time. – The phenyl group is not reactive under any of the conditions we describe in chapters 5‐8. Structure of Alkenes • The two carbon atoms of a double bond and the four atoms bonded to them lie in a plane, with bond angles of approximately 120°. 4 02/21/2019 Structure of Alkenes • Figure 4.1 According to the orbital overlap model, a double bond consists of one bond formed by overlap of sp2 hybrid orbitals and one bond formed by overlap of parallel 2p orbitals. -
Atomic Structure and Bonding
IM2665 Chemistry of Nanomaterials Atomic Structure and Bonding Assoc. Prof. Muhammet Toprak Division of Functional Materials KTH Royal Institute of Technology Background • Electromagnetic waves • Materials wave motion, • Quantified energy and – Louis de Broglie (1892-1987) photons • Uncertainity principle – Max Planck (1858-1947) – Werner Heisenberg (1901-1976) – Albert Einstein (1879-1955) • Schrödinger equation • Bohr’s atom model – Erwin Schrödinger (1887-1961) – Niels Bohr (1885-1962) IM2657 Nanostr. Mater. & Self Assembly 2 Electromagnetic Spectrum Visible light is only a small part of the Electromagnetic Spectrum IM2657 Nanostr. Mater. & Self Assembly 3 Electromagnetic Waves • Wavemotion is defined by • Calculations – ν = Frequency ( Hz) – c = ν × λ – λ = wavelength (m) – c = 3,00 × 108 m/s (speed of light) IM2657 Nanostr. Mater. & Self Assembly 4 Quantified Energy and Photons • E = h × ν; where h = 6,63 × 10-34 J s (Planck’s constant) • Photoelectric Effect (1905) IM2657 Nanostr. Mater. & Self Assembly 5 Thomson´s Pudding Model For a helium atom, the model proposes a large spherical cloud with two units of positive charge. Th e two electrons lie on a line through the center of the cloud. The loss of one electron produces the He+1 ion, with the remaining electron at the center of the cloud. The loss of a second electron prod uces He+2 , in which there is just a cloud of positive charge. IM2657 Nanostr. Mater. & Self Assembly 6 Rutherford’s Experiment The notion that atoms consist of very small nuclei containing protons and neutrons surrounded by a much larger cloud of electrons was IM2657 Nanostr. Mater. & Self Assembly 7 developed from an α particle scattering experiment.