A Century of Change in North Sea Plankton Communities Explored Through Integrating Historical Datasets
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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Salmon Mortalities at Inver Bay and Mcswyne’S Bay Finfish Farms, County Donegal, Ireland, During 2003 ______
6$/0210257$/,7,(6$7,19(5%$<$1'0&6:<1(¶6%$< ),1),6+)$506&2817<'21(*$/,5(/$1''85,1* )HEUXDU\ 0V0DUJRW&URQLQ 'U&DUROLQH&XVDFN 0V)LRQD*HRJKHJDQ 'U'DYH-DFNVRQ 'U(YLQ0F*RYHUQ 'U7HUU\0F0DKRQ 'U)UDQFLV2¶%HLUQ 0U0LFKHiOÏ&LQQHLGH 0U-RH6LONH &KHPLVWU\6HFWLRQ0DULQH,QVWLWXWH*DOZD\ (G 3K\WRSODQNWRQ8QLW0DULQH,QVWLWXWH*DOZD\ )LVK+HDOWK8QLW0DULQH,QVWLWXWH'XEOLQ $TXDFXOWXUH8QLW0DULQH,QVWLWXWH*DOZD\ &KHPLVWU\6HFWLRQ0DULQH,QVWLWXWH*DOZD\ %LRWR[LQ8QLW0DULQH,QVWLWXWH'XEOLQ %HQWKLF0RQLWRULQJ8QLW0DULQH,QVWLWXWH*DOZD\ 0DULQH(QYLURQPHQW )RRG6DIHW\6HUYLFHV0DULQH,QVWLWXWH*DOZD\ %LRWR[LQ8QLW0DULQH,QVWLWXWH*DOZD\ ,66112 Salmon Mortalities at Inver Bay and McSwyne’s Bay Finfish farms, County Donegal, Ireland, during 2003 ________________________________________________________________________ 2 Marine, Environment and Health Series, No.15, 2004 ___________________________________________________________________________________ Page no. CHAPTER 1 INTRODUCTION 6 1.1 Summary 6 1.2 Background 6 1.3 Summary mortalities by farm 8 1.4 Pattern of mortality development 9 1.5 Phases of MI investigation 10 1.6 Alternative scenarios 11 CHAPTER 2 ENVIRONMENTAL CONDITIONS 12 2.1 Summary 12 2.2 Currents 12 2.3 Water column structure 17 2.4 Wind data 19 2.5 Temperatures recorded in Inver and McSwynes Bay during 2003 21 2.6 References 24 CHAPTER 3 FISH HEALTH AND FARM MANAGEMENT, 2003 25 3.1 Data sources and approach 25 3.2 Site visits and Veterinary investigations 25 3.3 Farm management 36 3.4 Feed 36 3.5 Cage analysis 37 3.6 Sea lice (counts and treatments) 37 3.7 Discussion -
First Record of Navicula Pelagica (Bacillariophyta) in the South Atlantic Ocean: the Intriguing Occurrence of a Sea-Ice-Dwelling Species in a Tropical Estuary
First record of Navicula pelagica (Bacillariophyta) in the South Atlantic Ocean: the intriguing occurrence of a sea-ice-dwelling species in a tropical estuary HELEN MICHELLE DE JESUS AFFE1*, DIOGO SOUZA BEZERRA ROCHA2, MARIÂNGELA MENEZES3 & JOSÉ MARCOS DE CASTRO NUNES1 1 Laboratório de Algas Marinhas, Instituto de Biologia, Universidade Federal da Bahia. Rua Barão de Jeremoabo s/n, Ondina, Salvador, Bahia, 40170-115. Brazil 2 Instituto de Pesquisa Jardim Botânico do Rio de Janeiro. Rua Pacheco Leão, nº 915, Rio de Janeiro, Rio de Janeiro, 22460-030. Brazil 3 Laboratório de Ficologia, Departamento de Botânica, Museu Nacional, Universidade Federal do Rio de Janeiro. Quinta da Boa Vista s/n, São Cristovão, Rio de Janeiro, Rio de Janeiro, 20940040. Brazil * Corresponding author: [email protected] Abstract. Despite the wide distribution of species of the genus Navicula in the most diverse habitats around the globe, Navicula pelagica Cleve (Bacillariophyceae) is reported almost exclusively as one of the main components of the diatom biota of Arctic sea-ice. The present study is the first record of N. pelagica in the South Atlantic Ocean (Brazil) and demonstrates an ecological niche model of the species. The analyzed specimens were rectangular, with rounded angles in pleural view, the pervalvar axis measured 7.9-9.5μm and the apical axis 22-25μm, an evident central nucleus and two comma-shaped chloroplasts, one on each side of the nucleus, were observed. The specimens formed chains of 35 cells, on average, arranged in the typical pattern of rotation about the chain axis relative to their neighboring cell. The applied ecological niche model indicated that the Brazilian coast has low environmental suitability (~12%) for the development of N. -
The Planktonic Protist Interactome: Where Do We Stand After a Century of Research?
bioRxiv preprint doi: https://doi.org/10.1101/587352; this version posted May 2, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Bjorbækmo et al., 23.03.2019 – preprint copy - BioRxiv The planktonic protist interactome: where do we stand after a century of research? Marit F. Markussen Bjorbækmo1*, Andreas Evenstad1* and Line Lieblein Røsæg1*, Anders K. Krabberød1**, and Ramiro Logares2,1** 1 University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N- 0316 Oslo, Norway 2 Institut de Ciències del Mar (CSIC), Passeig Marítim de la Barceloneta, 37-49, ES-08003, Barcelona, Catalonia, Spain * The three authors contributed equally ** Corresponding authors: Ramiro Logares: Institute of Marine Sciences (ICM-CSIC), Passeig Marítim de la Barceloneta 37-49, 08003, Barcelona, Catalonia, Spain. Phone: 34-93-2309500; Fax: 34-93-2309555. [email protected] Anders K. Krabberød: University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N-0316 Oslo, Norway. Phone +47 22845986, Fax: +47 22854726. [email protected] Abstract Microbial interactions are crucial for Earth ecosystem function, yet our knowledge about them is limited and has so far mainly existed as scattered records. Here, we have surveyed the literature involving planktonic protist interactions and gathered the information in a manually curated Protist Interaction DAtabase (PIDA). In total, we have registered ~2,500 ecological interactions from ~500 publications, spanning the last 150 years. -
Center for Environmental Research and Coastal Oceans Monitoring (CERCOM)
Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) Molloy College Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program Annual Inventory Report 2019 FINAL REPORT Director; Dr. John T. Tanacredi Scientific Research Technical Assistant; Mr. Kyle F. Maurelli Administrative Coordinator; Ms. Regina Gorney Address: 132 Clyde Street West Sayville, NY 11796 2019 Student Intern Participation: Drew O’Connor Earth & Environmental Molloy College Studies Thomas Nadraus Biology Molloy College Brian Ford Biology Molloy College Ryan Mehryari Biology Molloy College Daman Kaur Nursing Molloy College Nick Buscemi Earth & Environmental Boston University Studies/ Philosophy Desmond Smith Earth & Environmental Molloy College Studies Erin Tudryn Earth & Environmental Molloy College Studies/ ART Caroline Kane Earth & Environmental Molloy College Studies Mark Maurelli Biomedical Engineering Stevens Institute for Technology Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment Phytoplankton Protocol: 1. Gather Samples 2. Make one slide per sample 3. View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Colum letter “ 5. Record using “ Tally’s “ per species found within sample 6. Capture anything interesting “ Take Picture “ 7. Duplicate pictures taken 8. Make sure measurement of species found is taken 9. Email Jennifer Maucher at [email protected] , include pictures, questions and names of the species you “guess” you found. If requested by NOAA, Jennifer will ask for a water sample from our findings. Phytoplankton Monitoring Network Harmful Algae Bloom Screening Data Entry Navigate to https://coastalscience.noaa.gov/research/stressor-impacts- mitigation/pmn/data/submit-data-regions/ (using Google Chrome, it can be found on the bookmarks bar), and select Atlantic Region 1. -
CPR Description
- 1 - The Continuous Plankton Recorder Survey of the North Pacific Sonia D. Batten1 & David W. Welch2 1Sir Alister Hardy Foundation for Ocean Science, Plymouth, UK. [email protected] 2Department of Fisheries and Oceans Canada, Nanaimo, BC. [email protected] Background Zooplankton are a key intermediate trophic group between the primary production in the ocean and fish and larger marine organisms that form valued resources. Large scale routine sampling in the open ocean from research vessels is impractical because of the large costs involved, consequently the north Pacific has been poorly sampled to date. Observed and predicted climate changes, observed large scale changes in Pacific salmon populations and other higher trophic levels all point to a need for large scale monitoring to detect changes in the ocean. The North Pacific Marine Science Organisation (PICES) supported the initiative to begin collecting baseline plankton data at its 1998 annual meeting, through the MONITOR Task team, and has remained closely linked with this program since its commencement in 2000. The eventual aim is a multidisciplinary monitoring program that will allow explanation of the measured variability. The initial proposal sought to make use of existing expertise in the North Atlantic, where the Hardy Continuous Plankton Recorder (CPR) has been deployed from Ships of Opportunity (merchant vessels going about their regular activities) for the last 70 years. Although designed in the 1920s, the CPR is a robust, reliable plankton sampler (Fig 1) that can be deployed and operated at the high speeds of modern commercial vessels (in excess of 20 knots). -
How to Cite Complete Issue More Information About This Article
Acta Biológica Colombiana ISSN: 0120-548X Universidad Nacional de Colombia, Facultad de Ciencias, Departamento de Biología RUIZ GÓMEZ, Anderson; MANCERA PINEDA, José Ernesto POTENTIALLY TOXIC DINOFLAGELLATES ASSOCIATED TO SEAGRASS ON ISLA DE BARÚ, COLOMBIAN CARIBBEAN, DURING EL NIÑO 2015 Acta Biológica Colombiana, vol. 24, no. 1, 2019, January-April, pp. 109-117 Universidad Nacional de Colombia, Facultad de Ciencias, Departamento de Biología DOI: https://doi.org/10.15446/abc.v24n1.61799 Available in: https://www.redalyc.org/articulo.oa?id=319059543009 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Journal's webpage in redalyc.org Portugal Project academic non-profit, developed under the open access initiative Facultad de Ciencias ACTA BIOLÓGICA COLOMBIANA Departamento de Biología http://www.revistas.unal.edu.co/index.php/actabiol Sede Bogotá ARTÍCULO DE INVESTIGACIÓN / RESEARCH ARTICLE ECOLOGÍA POTENTIALLY TOXIC DINOFLAGELLATES ASSOCIATED TO SEAGRASS ON ISLA DE BARÚ, COLOMBIAN CARIBBEAN, DURING EL NIÑO 2015 Dinoflagelados potencialmente tóxicos asociados a pastos marinos en Isla de Barú, Caribe Colombiano, durante El Niño 2015 Anderson RUIZ GÓMEZ1, José Ernesto MANCERA PINEDA1* 1 Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia, Carrera 30 n°. 45-03, Bogotá, Colombia. *For correspondence: [email protected] Received: 30th December 2016, Returned for revision: 29th May 2018, Accepted: 27th November 2018. Associate Editor: Sergi Sabater. Citation/Citar este artículo como: RUIZ GÓMEZ Anderson, MANCERA PINEDA José Ernesto. Potentially Toxic Dinoflagellates Associated to Seagrass on Isla de Barú, Colombian Caribbean, During El Niño 2015. -
Cutleriaceae, Phaeophyceae)Pre 651 241..248
bs_bs_banner Phycological Research 2012; 60: 241–248 Taxonomic revision of the genus Cutleria proposing a new genus Mutimo to accommodate M. cylindricus (Cutleriaceae, Phaeophyceae)pre_651 241..248 Hiroshi Kawai,1* Keita Kogishi,1 Takeaki Hanyuda1 and Taiju Kitayama2 1Kobe University Research Center for Inland Seas, Kobe, and 2Department of Botany, National Museum of Nature and Science, Amakubo, Tsukuba, Japan branched, compressed or cylindrical thalli (e.g., SUMMARY C. chilosa (Falkenberg) P.C. Silva, C. compressa Kützing, C. cylindrica Okamura and C. multifida Molecular phylogenetic analyses of representative Cut- (Turner) Greville); (ii) flat, fan-shaped thalli (e.g. C. leria species using mitochondrial cox3, chloroplast adspersa (Mertens ex Roth) De Notaris, C. hancockii psaA, psbA and rbcL gene sequences showed that E.Y. Dawson, C. kraftii Huisman and C. mollis Allender C. cylindrica Okamura was not included in the clade et Kraft). However, only a sporophytic generation is composed of other Cutleria species including the gen- reported for some taxa and the nature of their gameto- eritype C. multifida (Turner) Greville and the related phytic (erect) thalli are unclear (e.g. C. canariensis taxon Zanardinia typus (Nardo) P.C. Silva. Instead, (Sauvageau) I.A. Abbott et J.M. Huisman and C. irregu- C. cylindrica was sister to the clade composed of the laris I.A. Abbott & Huisman). Cutleria species typically two genera excluding C. cylindrica. Cutleria spp. have show a heteromorphic life history alternating between heteromophic life histories and their gametophytes are relatively large dioecious gametophytes of trichothallic rather diverse in gross morphology, from compressed or growth and small crustose sporophytes, considered cylindrical-branched to fan-shaped, whereas the sporo- characteristic of the order. -
The Evolution of Silicon Transporters in Diatoms1
CORE Metadata, citation and similar papers at core.ac.uk Provided by Woods Hole Open Access Server J. Phycol. 52, 716–731 (2016) © 2016 The Authors. Journal of Phycology published by Wiley Periodicals, Inc. on behalf of Phycological Society of America. This is an open access article under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. DOI: 10.1111/jpy.12441 THE EVOLUTION OF SILICON TRANSPORTERS IN DIATOMS1 Colleen A. Durkin3 Moss Landing Marine Laboratories, 8272 Moss Landing Road, Moss Landing California 95039, USA Julie A. Koester Department of Biology and Marine Biology, University of North Carolina Wilmington, Wilmington North Carolina 28403, USA Sara J. Bender2 Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole Massachusetts 02543, USA and E. Virginia Armbrust School of Oceanography, University of Washington, Seattle Washington 98195, USA Diatoms are highly productive single-celled algae perhaps their dominant ability to take up silicic acid that form an intricately patterned silica cell wall after from seawater in diverse environmental conditions. every cell division. They take up and utilize silicic Key index words: diatoms; gene family; molecular acid from seawater via silicon transporter (SIT) evolution; nutrients; silicon; transporter proteins. This study examined the evolution of the SIT gene family -
Marine Phytoplankton Atlas of Kuwait's Waters
Marine Phytoplankton Atlas of Kuwait’s Waters Marine Phytoplankton Atlas Marine Phytoplankton Atlas of Kuwait’s Waters Marine Phytoplankton Atlas of Kuwait’s of Kuwait’s Waters Manal Al-Kandari Dr. Faiza Y. Al-Yamani Kholood Al-Rifaie ISBN: 99906-41-24-2 Kuwait Institute for Scientific Research P.O.Box 24885, Safat - 13109, Kuwait Tel: (965) 24989000 – Fax: (965) 24989399 www.kisr.edu.kw Marine Phytoplankton Atlas of Kuwait’s Waters Published in Kuwait in 2009 by Kuwait Institute for Scientific Research, P.O.Box 24885, 13109 Safat, Kuwait Copyright © Kuwait Institute for Scientific Research, 2009 All rights reserved. ISBN 99906-41-24-2 Design by Melad M. Helani Printed and bound by Lucky Printing Press, Kuwait No part of this work may be reproduced or utilized in any form or by any means electronic or manual, including photocopying, or by any information or retrieval system, without the prior written permission of the Kuwait Institute for Scientific Research. 2 Kuwait Institute for Scientific Research - Marine phytoplankton Atlas Kuwait Institute for Scientific Research Marine Phytoplankton Atlas of Kuwait’s Waters Manal Al-Kandari Dr. Faiza Y. Al-Yamani Kholood Al-Rifaie Kuwait Institute for Scientific Research Kuwait Kuwait Institute for Scientific Research - Marine phytoplankton Atlas 3 TABLE OF CONTENTS CHAPTER 1: MARINE PHYTOPLANKTON METHODOLOGY AND GENERAL RESULTS INTRODUCTION 16 MATERIAL AND METHODS 18 Phytoplankton Collection and Preservation Methods 18 Sample Analysis 18 Light Microscope (LM) Observations 18 Diatoms Slide Preparation -
Zoosporic Parasites Infecting Marine Diatoms E a Black Box That Needs to Be Opened
fungal ecology xxx (2015) 1e18 available at www.sciencedirect.com ScienceDirect journal homepage: www.elsevier.com/locate/funeco Zoosporic parasites infecting marine diatoms e A black box that needs to be opened Bettina SCHOLZa,b, Laure GUILLOUc, Agostina V. MARANOd, Sigrid NEUHAUSERe, Brooke K. SULLIVANf, Ulf KARSTENg, € h i, Frithjof C. KUPPER , Frank H. GLEASON * aBioPol ehf., Einbuastig 2, 545 Skagastrond,€ Iceland bFaculty of Natural Resource Sciences, University of Akureyri, Borgir v. Nordurslod, IS 600 Akureyri, Iceland cSorbonne Universites, Universite Pierre et Marie Curie e Paris 6, UMR 7144, Station Biologique de Roscoff, Place Georges Teissier, CS90074, 29688 Roscoff cedex, France dInstituto de Botanica,^ Nucleo de Pesquisa em Micologia, Av. Miguel Stefano 3687, 04301-912, Sao~ Paulo, SP, Brazil eInstitute of Microbiology, University of Innsbruck, Technikerstr. 25, A-6020 Innsbruck, Austria fDepartment of Biosciences, University of Melbourne, Parkville, VIC 3010, Australia gInstitute of Biological Sciences, Applied Ecology & Phycology, University of Rostock, Albert-Einstein-Strasse 3, 18059 Rostock, Germany hOceanlab, University of Aberdeen, Main Street, Newburgh AB41 6AA, Scotland, United Kingdom iSchool of Biological Sciences FO7, University of Sydney, Sydney, NSW 2006, Australia article info abstract Article history: Living organisms in aquatic ecosystems are almost constantly confronted by pathogens. Received 12 May 2015 Nevertheless, very little is known about diseases of marine diatoms, the main primary Revision received 2 September 2015 producers of the oceans. Only a few examples of marine diatoms infected by zoosporic Accepted 2 September 2015 parasites are published, yet these studies suggest that diseases may have significant Available online - impacts on the ecology of individual diatom hosts and the composition of communities at Corresponding editor: both the producer and consumer trophic levels of food webs. -
(Bacillariophyta): a Description of a New Araphid Diatom Genus Based on Observations of Frustule and Auxospore Structure and 18S Rdna Phylogeny
Phycologia (2008) Volume 47 (4), 371–391 Published 3 July 2008 Pseudostriatella (Bacillariophyta): a description of a new araphid diatom genus based on observations of frustule and auxospore structure and 18S rDNA phylogeny 1 2 3 1 SHINYA SATO *, DAVID G. MANN ,SATOKO MATSUMOTO AND LINDA K. MEDLIN 1Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, D-27570 Bremerhaven, Germany 2Royal Botanic Garden, Edinburgh EH3 5LR, Scotland, United Kingdom 3Choshi Fisheries High School, 1-1-12 Nagatsuka Cho, Choshi City, Chiba, Japan S. SATO, D.G. MANN,S.MATSUMOTO AND L.K. MEDLIN. 2008. Pseudostriatella (Bacillariophyta): a description of a new araphid diatom genus based on observations of frustule and auxospore structure and 18S rDNA phylogeny. Phycologia 47: 371–391. DOI: 10.2216/08-02.1 Pseudostriatella oceanica gen et. sp. nov. is a marine benthic diatom that resembles Striatella unipunctata in gross morphology, attachment to the substratum by a mucilaginous stalk and possession of septate girdle bands. In light microscopy, P. oceanica can be distinguished from S. unipunctata by plastid shape, absence of truncation of the corners of the frustule, indiscernible striation and absence of polar rimoportulae. With scanning electron microscopy, P. oceanica can be distinguished by a prominent but unthickened longitudinal hyaline area, pegged areolae, multiple marginal rimoportulae and perforated septum. The hyaline area differs from the sterna of most pennate diatoms in being porous toward its expanded ends; in this respect, it resembles the elongate annuli of some centric diatoms, such as Attheya and Odontella. 18S rDNA phylogeny places P. oceanica among the pennate diatoms and supports a close relationship between P.