Coral Reefs of Japan
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Microbiomes of Gall-Inducing Copepod Crustaceans from the Corals Stylophora Pistillata (Scleractinia) and Gorgonia Ventalina
www.nature.com/scientificreports OPEN Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata Received: 26 February 2018 Accepted: 18 July 2018 (Scleractinia) and Gorgonia Published: xx xx xxxx ventalina (Alcyonacea) Pavel V. Shelyakin1,2, Sofya K. Garushyants1,3, Mikhail A. Nikitin4, Sofya V. Mudrova5, Michael Berumen 5, Arjen G. C. L. Speksnijder6, Bert W. Hoeksema6, Diego Fontaneto7, Mikhail S. Gelfand1,3,4,8 & Viatcheslav N. Ivanenko 6,9 Corals harbor complex and diverse microbial communities that strongly impact host ftness and resistance to diseases, but these microbes themselves can be infuenced by stresses, like those caused by the presence of macroscopic symbionts. In addition to directly infuencing the host, symbionts may transmit pathogenic microbial communities. We analyzed two coral gall-forming copepod systems by using 16S rRNA gene metagenomic sequencing: (1) the sea fan Gorgonia ventalina with copepods of the genus Sphaerippe from the Caribbean and (2) the scleractinian coral Stylophora pistillata with copepods of the genus Spaniomolgus from the Saudi Arabian part of the Red Sea. We show that bacterial communities in these two systems were substantially diferent with Actinobacteria, Alphaproteobacteria, and Betaproteobacteria more prevalent in samples from Gorgonia ventalina, and Gammaproteobacteria in Stylophora pistillata. In Stylophora pistillata, normal coral microbiomes were enriched with the common coral symbiont Endozoicomonas and some unclassifed bacteria, while copepod and gall-tissue microbiomes were highly enriched with the family ME2 (Oceanospirillales) or Rhodobacteraceae. In Gorgonia ventalina, no bacterial group had signifcantly diferent prevalence in the normal coral tissues, copepods, and injured tissues. The total microbiome composition of polyps injured by copepods was diferent. -
Long-Term Recruitment of Soft-Corals (Octocorallia: Alcyonacea) on Artificial Substrata at Eilat (Red Sea)
MARINE ECOLOGY - PROGRESS SERIES Vol. 38: 161-167, 1987 Published June 18 Mar. Ecol. Prog. Ser. Long-term recruitment of soft-corals (Octocorallia: Alcyonacea) on artificial substrata at Eilat (Red Sea) Y.Benayahu & Y.Loya Department of Zoology. The George S. Wise Center for Life Sciences, Tel Aviv University, Tel Aviv 69978. Israel ABSTRACT: Recruitment of soft corals (Octocorallia: Alcyonacea) on concrete plates was studied in the reefs of the Nature Reserve of Eilat at depths of 17 to 29 m over 12 yr. Xenia macrospiculata was the pioneering species, appealing on the vast majority of the plates before any other spat. This species remained the most conspicuous inhabitant of the substrata throughout the whole study. Approximately 10 % of the plates were very extensively colonized by X. rnacrospiculata, resembling the percentage of living coverage by the species in the surrounding reef, thus suggesting that during the study X. rnacrospiculata populations reached their maximal potential to capture the newly available substrata. The successive appearance of an additional 11 soft coral species was recorded. The species composition of the recruits and their abundance corresponded with the soft coral community in the natural reef, indicahng that the estabhshed spat were progeny of the local populations. Soft coral recruits utilized the edges and lower surfaces of the plates most successfully, rather than the exposed upper surfaces. Such preferential settling of alcyonaceans allows the spat to escape from unfavourable conditions and maintains their high survival in the established community. INTRODUCTION determine the role played by alcyonaceans in the course of reef colonization and in the reef's space Studies on processes and dynamics of reef benthic allocation. -
Checklist of Fish and Invertebrates Listed in the CITES Appendices
JOINTS NATURE \=^ CONSERVATION COMMITTEE Checklist of fish and mvertebrates Usted in the CITES appendices JNCC REPORT (SSN0963-«OStl JOINT NATURE CONSERVATION COMMITTEE Report distribution Report Number: No. 238 Contract Number/JNCC project number: F7 1-12-332 Date received: 9 June 1995 Report tide: Checklist of fish and invertebrates listed in the CITES appendices Contract tide: Revised Checklists of CITES species database Contractor: World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 ODL Comments: A further fish and invertebrate edition in the Checklist series begun by NCC in 1979, revised and brought up to date with current CITES listings Restrictions: Distribution: JNCC report collection 2 copies Nature Conservancy Council for England, HQ, Library 1 copy Scottish Natural Heritage, HQ, Library 1 copy Countryside Council for Wales, HQ, Library 1 copy A T Smail, Copyright Libraries Agent, 100 Euston Road, London, NWl 2HQ 5 copies British Library, Legal Deposit Office, Boston Spa, Wetherby, West Yorkshire, LS23 7BQ 1 copy Chadwick-Healey Ltd, Cambridge Place, Cambridge, CB2 INR 1 copy BIOSIS UK, Garforth House, 54 Michlegate, York, YOl ILF 1 copy CITES Management and Scientific Authorities of EC Member States total 30 copies CITES Authorities, UK Dependencies total 13 copies CITES Secretariat 5 copies CITES Animals Committee chairman 1 copy European Commission DG Xl/D/2 1 copy World Conservation Monitoring Centre 20 copies TRAFFIC International 5 copies Animal Quarantine Station, Heathrow 1 copy Department of the Environment (GWD) 5 copies Foreign & Commonwealth Office (ESED) 1 copy HM Customs & Excise 3 copies M Bradley Taylor (ACPO) 1 copy ^\(\\ Joint Nature Conservation Committee Report No. -
Coral Feeding on Microalgae Assessed with Molecular Trophic Markers
Molecular Ecology (2013) doi: 10.1111/mec.12486 Coral feeding on microalgae assessed with molecular trophic markers MIGUEL C. LEAL,*† CHRISTINE FERRIER-PAGES,‡ RICARDO CALADO,* MEGAN E. THOMPSON,† MARC E. FRISCHER† and JENS C. NEJSTGAARD† *Departamento de Biologia & CESAM, Universidade de Aveiro, Campus Universitario de Santiago, 3810-193 Aveiro, Portugal, †Skidaway Institute of Oceanography, 10 Ocean Science Circle, 31411 Savannah, GA, USA, ‡Centre Scientifique de Monaco, Avenue St-Martin, 98000 Monaco, Monaco Abstract Herbivory in corals, especially for symbiotic species, remains controversial. To investi- gate the capacity of scleractinian and soft corals to capture microalgae, we conducted controlled laboratory experiments offering five algal species: the cryptophyte Rhodo- monas marina, the haptophytes Isochrysis galbana and Phaeocystis globosa, and the diatoms Conticribra weissflogii and Thalassiosira pseudonana. Coral species included the symbiotic soft corals Heteroxenia fuscescens and Sinularia flexibilis, the asymbiotic scleractinian coral Tubastrea coccinea, and the symbiotic scleractinian corals Stylophora pistillata, Pavona cactus and Oculina arbuscula. Herbivory was assessed by end-point PCR amplification of algae-specific 18S rRNA gene fragments purified from coral tissue genomic DNA extracts. The ability to capture microalgae varied with coral and algal species and could not be explained by prey size or taxonomy. Herbivory was not detected in S. flexibilis and S. pistillata. P. globosa was the only algal prey that was never captured by any coral. Although predation defence mechanisms have been shown for Phaeocystis spp. against many potential predators, this study is the first to suggest this for corals. This study provides new insights into herbivory in symbiotic corals and suggests that corals may be selective herbivorous feeders. -
Coral Reefs & Global Climate Change
environment+ + Coral reefs & Global climate change Potential Contributions of Climate Change to Stresses on Coral Reef Ecosystems + Robert W. Buddemeier KANSAS G EOLOGICAL S URVEY Joan A. Kleypas NATIONAL C ENTER FOR ATMOSPHERIC R ESEARCH Richard B. Aronson DAUPHIN I SLAND S EA L AB + Coral reefs & Global climate change Potential Contributions of Climate Change to Stresses on Coral Reef Ecosystems Prepared for the Pew Center on Global Climate Change by Robert W. Buddemeier KANSAS G EOLOGICAL S URVEY Joan A. Kleypas NATIONAL C ENTER FOR ATMOSPHERIC R ESEARCH Richard B. Aronson DAUPHIN I SLAND S EA L AB February 2004 Contents Foreword ii Executive Summary iii I. Introduction 1 A. Coral Reefs and Reef Organisms 1 B. The “Coral Reef Crisis” 4 C. Climate and Environmental Change 5 II. Nonclimatic Stresses to Coral Reefs 7 A. Types and Categories of Stresses and Effects 7 B. Terrestrial Inputs 9 C. Overfishing and Resource Extraction 11 D. Coastal Zone Modification and Mining 13 E. Introduced and Invasive Species 13 III. Climatic Change Stresses to Coral Reefs 14 A. Coral Bleaching 15 B. Global Warming and Reef Distribution 17 C. Reduced Calcification Potential 19 D. Sea Level 21 E. El Niño-Southern Oscillation 21 F. Ocean Circulation Changes 22 + G. Precipitation and Storm Patterns 22 IV. Synthesis and Discussion 24 A. Infectious Diseases 24 B. Predation 25 C. Connections with Global Climate Change and Human Activity 26 D. Regional Comparison 27 E. Adaptation 28 V. Resources at Risk 30 + A. Socioeconomic Impacts 30 B. Biological and Ecological Impacts 31 C. Protection and Conservation 31 VI. -
Ecosystem Approach to Fisheries Management (EAFM) Country Position Paper—Malaysia
CORAL TRIANGLE INITIATIVE: EcOSYSTEM APPROACH TO FISHERIES MANAGEMENT (EAFM) Country Position Paper—Malaysia May 2013 This publication was prepared for Malaysia’s National Coordinating Committee with funding from the United States Agency for International Development’s Coral Triangle Support Partnership (CTSP). Coral Triangle Initiative: Ecosystem Approach to Fisheries Management (EAFM): Country Position Paper – Malaysia AUTHOR: Kevin Hiew EDITOR: Jasmin Saad, OceanResearch KEY CONTRIBUTORS: Gopinath Nagarai, Fanli Marine Consultancy USAID PROJecT NUMBER: GCP LWA Award # LAG-A-00-99-00048-00 CITATION: Hiew, K., J. Saad, and N. Gopinath. Coral Triangle Initiative: Ecosystem Approach to Fisheries Management (EAFM): Country Position Paper—Malaysia. Publication. Honolulu, Hawaii: The USAID Coral Triangle Support Partnership, 2012. Print. PRINTED IN: Honolulu, Hawaii, May 2013 This is a publication of the Coral Triangle Initiative on Corals, Fisheries and Food Security (CTI-CFF). Funding for the preparation of this document was provided by the USAID-funded Coral Triangle Support Partnership (CTSP). CTSP is a consortium led by the World Wildlife Fund, The Nature Conservancy and Conservation International with funding support from the United States Agency for International Development’s Regional Asia Program. For more information on the Coral Triangle Initiative, please contact: Coral Triangle Initiative on Coral Reefs, Fisheries and Food Security Interim-Regional Secretariat Ministry of Marine Affairs and Fisheries of the Republic of Indonesia Mina Bahari Building II, 17th Floor Jalan Medan Merdeka Timur No. 16 Jakarta Pusat 10110, Indonesia www.coraltriangleinitiative.org CTI-CFF National Coordinating Committee Professor Nor Aeni Haji Mokhtar Under Secretary National Oceanography Directorate, Ministry of Science, Technology and Innovation, Level 6, Block C4, Complex C, Federal Government Administrative Centre, 62662 Putrajaya, Malaysia. -
Taxonomic Checklist of CITES Listed Coral Species Part II
CoP16 Doc. 43.1 (Rev. 1) Annex 5.2 (English only / Únicamente en inglés / Seulement en anglais) Taxonomic Checklist of CITES listed Coral Species Part II CORAL SPECIES AND SYNONYMS CURRENTLY RECOGNIZED IN THE UNEP‐WCMC DATABASE 1. Scleractinia families Family Name Accepted Name Species Author Nomenclature Reference Synonyms ACROPORIDAE Acropora abrolhosensis Veron, 1985 Veron (2000) Madrepora crassa Milne Edwards & Haime, 1860; ACROPORIDAE Acropora abrotanoides (Lamarck, 1816) Veron (2000) Madrepora abrotanoides Lamarck, 1816; Acropora mangarevensis Vaughan, 1906 ACROPORIDAE Acropora aculeus (Dana, 1846) Veron (2000) Madrepora aculeus Dana, 1846 Madrepora acuminata Verrill, 1864; Madrepora diffusa ACROPORIDAE Acropora acuminata (Verrill, 1864) Veron (2000) Verrill, 1864; Acropora diffusa (Verrill, 1864); Madrepora nigra Brook, 1892 ACROPORIDAE Acropora akajimensis Veron, 1990 Veron (2000) Madrepora coronata Brook, 1892; Madrepora ACROPORIDAE Acropora anthocercis (Brook, 1893) Veron (2000) anthocercis Brook, 1893 ACROPORIDAE Acropora arabensis Hodgson & Carpenter, 1995 Veron (2000) Madrepora aspera Dana, 1846; Acropora cribripora (Dana, 1846); Madrepora cribripora Dana, 1846; Acropora manni (Quelch, 1886); Madrepora manni ACROPORIDAE Acropora aspera (Dana, 1846) Veron (2000) Quelch, 1886; Acropora hebes (Dana, 1846); Madrepora hebes Dana, 1846; Acropora yaeyamaensis Eguchi & Shirai, 1977 ACROPORIDAE Acropora austera (Dana, 1846) Veron (2000) Madrepora austera Dana, 1846 ACROPORIDAE Acropora awi Wallace & Wolstenholme, 1998 Veron (2000) ACROPORIDAE Acropora azurea Veron & Wallace, 1984 Veron (2000) ACROPORIDAE Acropora batunai Wallace, 1997 Veron (2000) ACROPORIDAE Acropora bifurcata Nemenzo, 1971 Veron (2000) ACROPORIDAE Acropora branchi Riegl, 1995 Veron (2000) Madrepora brueggemanni Brook, 1891; Isopora ACROPORIDAE Acropora brueggemanni (Brook, 1891) Veron (2000) brueggemanni (Brook, 1891) ACROPORIDAE Acropora bushyensis Veron & Wallace, 1984 Veron (2000) Acropora fasciculare Latypov, 1992 ACROPORIDAE Acropora cardenae Wells, 1985 Veron (2000) CoP16 Doc. -
SEDIMENTARY FRAMEWORK of Lmainland FRINGING REEF DEVELOPMENT, CAPE TRIBULATION AREA
GREAT BARRIER REEF MARINE PARK AUTHORITY TECHNICAL MEMORANDUM GBRMPA-TM-14 SEDIMENTARY FRAMEWORK OF lMAINLAND FRINGING REEF DEVELOPMENT, CAPE TRIBULATION AREA D.P. JOHNSON and RM.CARTER Department of Geology James Cook University of North Queensland Townsville, Q 4811, Australia DATE November, 1987 SUMMARY Mainland fringing reefs with a diverse coral fauna have developed in the Cape Tribulation area primarily upon coastal sedi- ment bodies such as beach shoals and creek mouth bars. Growth on steep rocky headlands is minor. The reefs have exten- sive sandy beaches to landward, and an irregular outer margin. Typically there is a raised platform of dead nef along the outer edge of the reef, and dead coral columns lie buried under the reef flat. Live coral growth is restricted to the outer reef slope. Seaward of the reefs is a narrow wedge of muddy, terrigenous sediment, which thins offshore. Beach, reef and inner shelf sediments all contain 50% terrigenous material, indicating the reefs have always grown under conditions of heavy terrigenous influx. The relatively shallow lower limit of coral growth (ca 6m below ADD) is typical of reef growth in turbid waters, where decreased light levels inhibit coral growth. Radiocarbon dating of material from surveyed sites confirms the age of the fossil coral columns as 33304110 ybp, indicating that they grew during the late postglacial sea-level high (ca 5500-6500 ybp). The former thriving reef-flat was killed by a post-5500 ybp sea-level fall of ca 1 m. Although this study has not assessed the community structure of the fringing reefs, nor whether changes are presently occur- ring, it is clear the corals present today on the fore-reef slope have always lived under heavy terrigenous influence, and that the fossil reef-flat can be explained as due to the mid-Holocene fall in sea-level. -
What Evidence Exists on the Impacts of Chemicals Arising from Human Activity on Tropical Reef-Building Corals?
Ouédraogo et al. Environ Evid (2020) 9:18 https://doi.org/10.1186/s13750-020-00203-x Environmental Evidence SYSTEMATIC MAP PROTOCOL Open Access What evidence exists on the impacts of chemicals arising from human activity on tropical reef-building corals? A systematic map protocol Dakis‑Yaoba Ouédraogo1* , Romain Sordello2, Sophie Brugneaux3, Karen Burga4, Christophe Calvayrac5,6, Magalie Castelin7, Isabelle Domart‑Coulon8, Christine Ferrier‑Pagès9, Mireille M. M. Guillaume10,11, Laetitia Hédouin11,12, Pascale Joannot13, Olivier Perceval14 and Yorick Reyjol2 Abstract Background: Tropical coral reefs cover ca. 0.1% of the Earth’s surface but host an outstanding biodiversity and provide important ecosystem services to millions of people living nearby. However, they are currently threatened by both local (e.g. nutrient enrichment and chemical pollution of coastal reefs, arising from poor land management, agriculture and industry) and global stressors (mainly seawater warming and acidifcation, i.e. climate change). Global and local stressors interact together in diferent ways, but the presence of one stressor often reduces the tolerance to additional stress. While global stressors cannot be halted by local actions, local stressors can be reduced through ecosystem management, therefore minimizing the impact of climate change on reefs. To inform decision‑makers, we propose here to systematically map the evidence of impacts of chemicals arising from anthropogenic activities on tropical reef‑building corals, which are the main engineer species of reef ecosystems. We aim to identify the combina‑ tions of chemical and coral responses that have attracted the most attention and for which evidence can be further summarized in a systematic review that will give practical information to decision‑makers. -
1 Ecological Engineering Considerations for Coral
ECOLOGICAL ENGINEERING CONSIDERATIONS FOR CORAL REEFS IN THE DESIGN OF MULTIFUNCTIONAL COASTAL STRUCTURES Michael Foley1, Yuko Stender2, Amarjit Singh1, Paul Jokiel2, and Ku‘ulei Rodgers2 A multifunctional structure is being designed for the Kahului Harbor, Maui, Hawai‘i, to mitigate operational problems caused by wave energy while also providing coral reef habitat. There is limited information on how the design of a coastal structure can be manipulated to enhance the ecology of targeted coral communities. To inform the ecological engineering of an artificial coral reef, the relationship between substrate characteristics and coral colonization was investigated through coral recruitment experiments and study of field conditions. Three concrete compositions that differed by the use of basalt, limestone, or recycled aggregates were tested in field and laboratory experiments to determine the impact of each substrate on the recruitment of juvenile hermatypic corals. The concrete test plates were deployed in three environments for a period of about one year, after which the coral recruits on each plate were identified and counted. No significant difference was found in the average number of coral recruits on the concrete mixed with basalt, limestone and recycled aggregate (60 ± 9, 83 ± 17 and 77 ± 14, respectively). Significant differences in coral recruitment were found due to the laboratory tanks, deep water, and shallow water field tests environments (86 ± 11, 135 ± 15 and 4 ± 1, respectively). These results highlight the importance of environmental site conditions for the development of coral reef habitat. A field study was conducted in the vicinity of purposed artificial reef site to relate the topographic features of the surrounding environment to the levels of live coral coverage. -
Guide to the Identification of Precious and Semi-Precious Corals in Commercial Trade
'l'llA FFIC YvALE ,.._,..---...- guide to the identification of precious and semi-precious corals in commercial trade Ernest W.T. Cooper, Susan J. Torntore, Angela S.M. Leung, Tanya Shadbolt and Carolyn Dawe September 2011 © 2011 World Wildlife Fund and TRAFFIC. All rights reserved. ISBN 978-0-9693730-3-2 Reproduction and distribution for resale by any means photographic or mechanical, including photocopying, recording, taping or information storage and retrieval systems of any parts of this book, illustrations or texts is prohibited without prior written consent from World Wildlife Fund (WWF). Reproduction for CITES enforcement or educational and other non-commercial purposes by CITES Authorities and the CITES Secretariat is authorized without prior written permission, provided the source is fully acknowledged. Any reproduction, in full or in part, of this publication must credit WWF and TRAFFIC North America. The views of the authors expressed in this publication do not necessarily reflect those of the TRAFFIC network, WWF, or the International Union for Conservation of Nature (IUCN). The designation of geographical entities in this publication and the presentation of the material do not imply the expression of any opinion whatsoever on the part of WWF, TRAFFIC, or IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The TRAFFIC symbol copyright and Registered Trademark ownership are held by WWF. TRAFFIC is a joint program of WWF and IUCN. Suggested citation: Cooper, E.W.T., Torntore, S.J., Leung, A.S.M, Shadbolt, T. and Dawe, C. -
The Reproduction of the Red Sea Coral Stylophora Pistillata
MARINE ECOLOGY PROGRESS SERIES Vol. 1, 133-144, 1979 - Published September 30 Mar. Ecol. Prog. Ser. The Reproduction of the Red Sea Coral Stylophora pistillata. I. Gonads and Planulae B. Rinkevich and Y.Loya Department of Zoology. The George S. Wise Center for Life Sciences, Tel Aviv University. Tel Aviv. Israel ABSTRACT: The reproduction of Stylophora pistillata, one of the most abundant coral species in the Gulf of Eilat, Red Sea, was studied over more than two years. Gonads were regularly examined using histological sections and the planula-larvae were collected in situ with plankton nets. S. pistillata is an hermaphroditic species. Ovaries and testes are situated in the same polyp, scattered between and beneath the septa and attached to them by stalks. Egg development starts in July preceding the spermaria, which start to develop only in October. A description is given on the male and female gonads, their structure and developmental processes. During oogenesis most of the oocytes are absorbed and usually only one oocyte remains in each gonad. S. pistillata broods its eggs to the planula stage. Planulae are shed after sunset and during the night. After spawning, the planula swims actively and changes its shape frequently. A mature planula larva of S. pistillata has 6 pairs of complete mesenteries (Halcampoides stage). However, a wide variability in developmental stages exists in newly shed planulae. The oral pole of the planula shows green fluorescence. Unique organs ('filaments' and 'nodules') are found on the surface of the planula;