An Annelid Model for Regeneration Studies Pygospio Elegans
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A Comprehensive Wetland Program for Fringing Salt Marshes in the Ory K River, Maine Pamela A
University of New England DUNE: DigitalUNE Environmental Studies Faculty Publications Environmental Studies Department 5-31-2007 A Comprehensive Wetland Program For Fringing Salt Marshes In The orY k River, Maine Pamela A. Morgan University of New England, [email protected] Jeremy Miller Wells National Estuarine Research Reserve Christopher Cayce Dalton Wells National Estuarine Research Reserve Michele Dionne Wells National Estuarine Research Reserve Follow this and additional works at: http://dune.une.edu/env_facpubs Part of the Environmental Health and Protection Commons, Environmental Indicators and Impact Assessment Commons, Environmental Monitoring Commons, Marine Biology Commons, Plant Sciences Commons, and the Systems Biology Commons Recommended Citation Morgan, Pamela A.; Miller, Jeremy; Dalton, Christopher Cayce; and Dionne, Michele, "A Comprehensive Wetland Program For Fringing Salt Marshes In The orkY River, Maine" (2007). Environmental Studies Faculty Publications. Paper 3. http://dune.une.edu/env_facpubs/3 This Article is brought to you for free and open access by the Environmental Studies Department at DUNE: DigitalUNE. It has been accepted for inclusion in Environmental Studies Faculty Publications by an authorized administrator of DUNE: DigitalUNE. For more information, please contact [email protected]. A Comprehensive Wetland Program for Fringing Salt Marshes in the York River, Maine A Final Report Submitted to the Environmental Protection Agency by: Dr. Pamela Morgan1 Jeremy Miller2 Christopher Cayce Dalton2,3 Dr. Michele Dionne2 1 University of New England Department of Environmental Studies 11 Hills Beach Road, Biddeford ME 04009 2 Wells National Estuarine Research Reserve 342 Laudholm Farm Road, Wells ME 04090 3 Town of York 186 York Street, York ME 03909 May 31, 2007 Contents Executive Summary ........................................................................................................5 Introduction ................................................................................................................. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Mitochondrial Genomes of Two Polydora
www.nature.com/scientificreports OPEN Mitochondrial genomes of two Polydora (Spionidae) species provide further evidence that mitochondrial architecture in the Sedentaria (Annelida) is not conserved Lingtong Ye1*, Tuo Yao1, Jie Lu1, Jingzhe Jiang1 & Changming Bai2 Contrary to the early evidence, which indicated that the mitochondrial architecture in one of the two major annelida clades, Sedentaria, is relatively conserved, a handful of relatively recent studies found evidence that some species exhibit elevated rates of mitochondrial architecture evolution. We sequenced complete mitogenomes belonging to two congeneric shell-boring Spionidae species that cause considerable economic losses in the commercial marine mollusk aquaculture: Polydora brevipalpa and Polydora websteri. The two mitogenomes exhibited very similar architecture. In comparison to other sedentarians, they exhibited some standard features, including all genes encoded on the same strand, uncommon but not unique duplicated trnM gene, as well as a number of unique features. Their comparatively large size (17,673 bp) can be attributed to four non-coding regions larger than 500 bp. We identifed an unusually large (putative) overlap of 14 bases between nad2 and cox1 genes in both species. Importantly, the two species exhibited completely rearranged gene orders in comparison to all other available mitogenomes. Along with Serpulidae and Sabellidae, Polydora is the third identifed sedentarian lineage that exhibits disproportionally elevated rates of mitogenomic architecture rearrangements. Selection analyses indicate that these three lineages also exhibited relaxed purifying selection pressures. Abbreviations NCR Non-coding region PCG Protein-coding gene Metazoan mitochondrial genomes (mitogenomes) usually encode the set of 37 genes, comprising 2 rRNAs, 22 tRNAs, and 13 proteins, encoded on both genomic strands. -
FAU Institutional Repository
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1984 Elsevier B.V. This manuscript is an author version with the final publication available at http://www.sciencedirect.com/science/journal/00220981 and may be cited as: Wilson, W. H., Jr. (1984). Non‐overlapping distributions of spionid polychaetes: the relative importance of habitat and competition. Journal of Experimental Marine Biology and Ecology, 75(2), 119‐127. doi:10.1016/0022‐0981(84)90176‐X J. Exp. Mar. Bioi. Ecol., 1984, Vol. 75, pp. 119-127 119 Elsevier JEM 217 NON-OVERLAPPING DISTRIBUTIONS OF SPIONID POLYCHAETES: THE RELATIVE IMPORTANCE OF HABITAT AND COMPETITIONI W. HERBERT WILSON, JR. Harbor Branch Institution, Inc .. R.R. 1, Box 196, Fort Pierce, FL 33450. U.S.A. Abstract: The spionid polychaetes, Pygospio elegans Claparede, Pseudopolydora kempi (Southern), and Rhynchospio arenincola Hartman are found in False Bay, Washington. Two species, Pygospio elegans and Pseudopolydora kempi, co-occur in the high intertidal zone. The third species Rhynchospio arenincola occurs only in low intertidal areas. Reciprocal transplant experiments were used to test the importance of intraspecific density, interspecific density, and habitat on the survivorship of experimental animals. For all three species, only habitat had a significant effect. Individuals of each species survived better in experimental containers in their native habitat, regardless of the heterospecific and conspecific densities used in the experiments. The physical stresses associated with the prolonged exposure of the high intertidal site are experimentally shown to result in Rhynchospio mortality. From these experiments, habitat type is the only significant factor tested which can explain the observed distributions; the presence of confamilials has no detected effect on the survivorship of any species, suggesting that competition does not serve to maintain the patterns of distribution. -
Annelida, Amphinomidae) in the Mediterranean Sea with an Updated Revision of the Alien Mediterranean Amphinomids
A peer-reviewed open-access journal ZooKeys 337: 19–33 (2013)On the occurrence of the firewormEurythoe complanata complex... 19 doi: 10.3897/zookeys.337.5811 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research On the occurrence of the fireworm Eurythoe complanata complex (Annelida, Amphinomidae) in the Mediterranean Sea with an updated revision of the alien Mediterranean amphinomids Andrés Arias1, Rômulo Barroso2,3, Nuria Anadón1, Paulo C. Paiva4 1 Departamento de Biología de Organismos y Sistemas (Zoología), Universidad de Oviedo, Oviedo 33071, Spain 2 Pontifícia Universidade Católica do Rio de Janeiro , Rio de Janeiro, Brazil 3 Museu de Zoologia da Unicamp, Campinas, SP, Brazil 4 Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ) , Rio de Janeiro, RJ, Brasil Corresponding author: Andrés Arias ([email protected]) Academic editor: C. Glasby | Received 17 June 2013 | Accepted 19 September 2013 | Published 30 September 2013 Citation: Arias A, Barroso R, Anadón N, Paiva PC (2013) On the occurrence of the fireworm Eurythoe complanata complex (Annelida, Amphinomidae) in the Mediterranean Sea with an updated revision of the alien Mediterranean amphinomids. ZooKeys 337: 19–33. doi: 10.3897/zookeys.337.5811 Abstract The presence of two species within the Eurythoe complanata complex in the Mediterranean Sea is reported, as well as their geographical distributions. One species, Eurythoe laevisetis, occurs in the eastern and cen- tral Mediterranean, likely constituting the first historical introduction to the Mediterranean Sea and the other, Eurythoe complanata, in both eastern and Levantine basins. Brief notes on their taxonomy are also provided and their potential pathways for introduction to the Mediterranean are discussed. -
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Memoirs of Museum Victoria 71: 217–236 (2014) Published December 2014 ISSN 1447-2546 (Print) 1447-2554 (On-line) http://museumvictoria.com.au/about/books-and-journals/journals/memoirs-of-museum-victoria/ Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars EIVIND OUG1,* (http://zoobank.org/urn:lsid:zoobank.org:author:EF42540F-7A9E-486F-96B7-FCE9F94DC54A), TORKILD BAKKEN2 (http://zoobank.org/urn:lsid:zoobank.org:author:FA79392C-048E-4421-BFF8-71A7D58A54C7) AND JON ANDERS KONGSRUD3 (http://zoobank.org/urn:lsid:zoobank.org:author:4AF3F49E-9406-4387-B282-73FA5982029E) 1 Norwegian Institute for Water Research, Region South, Jon Lilletuns vei 3, NO-4879 Grimstad, Norway ([email protected]) 2 Norwegian University of Science and Technology, University Museum, NO-7491 Trondheim, Norway ([email protected]) 3 University Museum of Bergen, University of Bergen, PO Box 7800, NO-5020 Bergen, Norway ([email protected]) * To whom correspondence and reprint requests should be addressed. E-mail: [email protected] Abstract Oug, E., Bakken, T. and Kongsrud, J.A. 2014. Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars. Memoirs of Museum Victoria 71: 217–236. Early descriptions of species from Norwegian waters are reviewed, with a focus on the basic requirements for re- assessing their characteristics, in particular, by clarifying the status of the original material and locating sampling sites. A large number of polychaete species from the North Atlantic were described in the early period of zoological studies in the 18th and 19th centuries. -
Baltic Sea Genetic Biodiversity: Current Knowledge Relating to Conservation Management
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Brage IMR Received: 21 August 2016 Revised: 26 January 2017 Accepted: 16 February 2017 DOI: 10.1002/aqc.2771 REVIEW ARTICLE Baltic Sea genetic biodiversity: Current knowledge relating to conservation management Lovisa Wennerström1* | Eeva Jansson1,2* | Linda Laikre1 1 Department of Zoology, Stockholm University, SE‐106 91 Stockholm, Sweden Abstract 2 Institute of Marine Research, Bergen, 1. The Baltic Sea has a rare type of brackish water environment which harbours unique genetic Norway lineages of many species. The area is highly influenced by anthropogenic activities and is affected Correspondence by eutrophication, climate change, habitat modifications, fishing and stocking. Effective genetic Lovisa Wennerström, Department of Zoology, management of species in the Baltic Sea is highly warranted in order to maximize their potential SE‐106 91 Stockholm, Sweden. for survival, but shortcomings in this respect have been documented. Lack of knowledge is one Email: [email protected] reason managers give for why they do not regard genetic diversity in management. Funding information Swedish Research Council Formas (LL); The 2. Here, the current knowledge of population genetic patterns of species in the Baltic Sea is BONUS BAMBI Project supported by BONUS reviewed and summarized with special focus on how the information can be used in (Art 185), funded jointly by the European management. The extent to which marine protected areas (MPAs) protect genetic diversity Union and the Swedish Research Council Formas (LL); Swedish Cultural Foundation in is also investigated in a case study of four key species. -
Neanthes Limnicola Class: Polychaeta, Errantia
Phylum: Annelida Neanthes limnicola Class: Polychaeta, Errantia Order: Phyllodocida, Nereidiformia A mussel worm Family: Nereididae, Nereidinae Taxonomy: Depending on the author, Ne- wider than long, with a longitudinal depression anthes is currently considered a separate or (Fig. 2b). subspecies to the genus Nereis (Hilbig Trunk: Very thick segments that are 1997). Nereis sensu stricto differs from the wider than they are long, gently tapers to pos- genus Neanthes because the latter genus terior (Fig. 1). includes species with spinigerous notosetae Posterior: Pygidium bears two, styli- only. Furthermore, N. limnicola has most form ventrolateral anal cirri that are as long as recently been included in the genus (or sub- last seven segments (Fig. 1) (Hartman 1938). genus) Hediste due to the neuropodial setal Parapodia: The first two setigers are unira- morphology (Sato 1999; Bakken and Wilson mous. All other parapodia are biramous 2005; Tusuji and Sato 2012). However, re- (Nereididae, Blake and Ruff 2007) where both production is markedly different in N. limni- notopodia and neuropodia have acicular lobes cola than other Hediste species (Sato 1999). and each lobe bears 1–3 additional, medial Thus, synonyms of Neanthes limnicola in- and triangular lobes (above and below), called clude Nereis limnicola (which was synony- ligules (Blake and Ruff 2007) (Figs. 1, 5). The mized with Neanthes lighti in 1959 (Smith)), notopodial ligule is always smaller than the Nereis (Neanthes) limnicola, Nereis neuropodial one. The parapodial lobes are (Hediste) limnicola and Hediste limnicola. conical and not leaf-like or globular as in the The predominating name in current local in- family Phyllodocidae. (A parapodium should tertidal guides (e.g. -
Pygospio Elegans
Protistology 10 (4), 148–157 (2016) Protistology Metchnikovella dogieli sp. n. (Microsporidia: Metch- nikovellida), a parasite of archigregarines Selenidium sp. from polychaetes Pygospio elegans Gita G. Paskerova1, Ekaterina V. Frolova1, Magdaléna Kováčiková2, Tatiana S. Panfilkina1, Yelisei S. Mesentsev1, Alexey V. Smirnov1 and Elena S. Nassonova1,3 1 Department of Invertebrate Zoology, St Petersburg State University, Universitetskaya nab. 7/9, 199034 St Petersburg, Russian Federation 2 Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 61137 Brno, Czech Republic 3 Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave. 4, 194064 St Petersburg, Russian Federation | Submitted November 21, 2016 | Accepted December 10, 2016 | Summary Cysts and free spores of a metchnikovellid microsporidium were found in several specimens of an archigregarine Selenidium sp. isolated from polychaetes Pygospio elegans. Samples were collected at the littoral area of the Kandalaksha Bay of the White Sea in the year 2016. We examined this material with high-quality light optics in stained and live preparations. The structure of cysts and the host range suggest that this species belongs to the genus Metchnikovella Caullery et Mesnil, 1897. The length of the cysts varied from 9.5 to 34 µm (av. 23.8 µm); the width of the cysts was 4.8–9.2 µm (av. 8.2 µm). The number of cyst-bound spores varied from 7 to 18. Cyst-bound spores were oval or ovoid and arranged in two or three rows. The length of the spores was 2.2–3.0 µm (av. 2.6 µm); the width was 1.4–2.9 µm (av. -
The Namanereidinae (Polychaeta: Nereididae). Part 1, Taxonomy and Phylogeny
© Copyright Australian Museum, 1999 Records of the Australian Museum, Supplement 25 (1999). ISBN 0-7313-8856-9 The Namanereidinae (Polychaeta: Nereididae). Part 1, Taxonomy and Phylogeny CHRISTOPHER J. GLASBY National Institute for Water & Atmospheric Research, PO Box 14-901, Kilbirnie, Wellington, New Zealand [email protected] ABSTRACT. A cladistic analysis and taxonomic revision of the Namanereidinae (Nereididae: Polychaeta) is presented. The cladistic analysis utilising 39 morphological characters (76 apomorphic states) yielded 10,000 minimal-length trees and a highly unresolved Strict Consensus tree. However, monophyly of the Namanereidinae is supported and two clades are identified: Namalycastis containing 18 species and Namanereis containing 15 species. The monospecific genus Lycastoides, represented by L. alticola Johnson, is too poorly known to be included in the analysis. Classification of the subfamily is modified to reflect the phylogeny. Thus, Namalycastis includes large-bodied species having four pairs of tentacular cirri; autapomorphies include the presence of short, subconical antennae and enlarged, flattened and leaf-like posterior cirrophores. Namanereis includes smaller-bodied species having three or four pairs of tentacular cirri; autapomorphies include the absence of dorsal cirrophores, absence of notosetae and a tripartite pygidium. Cryptonereis Gibbs, Lycastella Feuerborn, Lycastilla Solís-Weiss & Espinasa and Lycastopsis Augener become junior synonyms of Namanereis. Thirty-six species are described, including seven new species of Namalycastis (N. arista n.sp., N. borealis n.sp., N. elobeyensis n.sp., N. intermedia n.sp., N. macroplatis n.sp., N. multiseta n.sp., N. nicoleae n.sp.), four new species of Namanereis (N. minuta n.sp., N. serratis n.sp., N. stocki n.sp., N. -
Trophic Upgrading of Long-Chain Polyunsaturated Fatty Acids By
Marine Biology (2021) 168:67 https://doi.org/10.1007/s00227-021-03874-3 ORIGINAL PAPER Trophic upgrading of long‑chain polyunsaturated fatty acids by polychaetes: a stable isotope approach using Alitta virens Supanut Pairohakul1,3 · Peter J. W. Olive1 · Matthew G. Bentley2 · Gary S. Caldwell1 Received: 5 August 2019 / Accepted: 4 April 2021 © The Author(s) 2021 Abstract Polychaete worms are rich sources of polyunsaturated fatty acids (PUFA) and are increasingly incorporated into aquaculture broodstock diets. Conventionally, the build-up of PUFA in polychaetes was considered passive, with direct accumulation along the food web, originating with microalgae and other primary producers. However, it has been argued that polychaetes (and other multicellular eukaryotes) are capable of PUFA biosynthesis through the elongation and desaturation of precur- sor lipids. We further test this hypothesis in the ecologically and economically important nereid polychaete Alitta virens by adopting a stable isotope labelling approach. Worms were fed a 13C-1-palmitic acid (C16:0) enriched diet with the resulting isotopically enriched lipid products identifed over a 7-day period. The data showed strong evidence of lipid elongation and desaturation, but with a high rate of PUFA turnover. A putative biosynthetic pathway is proposed, terminating with doco- sahexaenoic acid (DHA) via arachidonic (AA) and eicosapentaenoic acids (EPA) and involving a Δ8 desaturase. Introduction bacteria, protists and even by desaturation and chain elonga- tion in many animals (Nichols 2003; Alhazzaa et al. 2011; Long-chain polyunsaturated fatty acids (PUFA) are essential Hughes et al. 2011; De Troch et al. 2012; Galloway et al. components in human and animal nutrition. -
Polydora (Polychaeta: Spionidae) Species from Taiwan Vasily I
Zoological Studies 39(3): 203-217 (2000) Polydora (Polychaeta: Spionidae) Species from Taiwan Vasily I. Radashevsky1,2 and Hwey-Lian Hsieh2,* 1Institute of Marine Biology, Russian Academy of Sciences, Vladivostok 690041, Russia 2Institute of Zoology, Academia Sinica, Taipei, Taiwan 115, R.O.C. (Accepted March 7, 2000) Vasily I. Radashevsky and Hwey-Lian Hsieh (2000) Polydora (Polychaeta: Spionidae) species from Taiwan. Zoological Studies 39(3): 203-217. This report discusses 5 species of the genus Polydora (Polychaeta: Spionidae) from the shallow waters of Taiwan and off mainland China. These include P. cf. agassizi Claparède, 1869, P. cornuta Bosc, 1802, and 3 new species: P. fusca, P. triglanda, and P. villosa. Polydora cf. agassizi inhabits mud tubes on the surface of a horseshoe crab; P. cornuta and P. fusca inhabit mud tubes on soft bottoms while P. villosa bores into skeletons of living corals. Polydora triglanda is both a shell-borer and a tube- dweller, and no morphological differences were found between individuals from the 2 habitats. Five species are described and illustrated, and a key is provided for their identification. Polydora species with black bands on the palps, median antenna on the caruncle, and needlelike spines on the posterior notopodia are reviewed, and their morphological characteristics are compared. Key words: Spionid polychaete, Polydora, Systematics, Morphology. Spionid polychaetes from Taiwan have not yet been the subject of systematic study and to date only parentheses after the museum abbreviation and re- 1 species, Pseudopolydora diopatra Hsieh, is de- gistration number. scribed from the region (Hsieh 1992). In recent stud- ies on macrobenthic communities, a large number of SYSTEMATIC ACCOUNT spionids was collected along the western coast of Taiwan and from Kinmen Island, located just off Key to identification of Polydora species from Taiwan mainland China (Fig.