Six Phases of Cosmic Chemistry
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Intelligent Design, Abiogenesis, and Learning from History: Dennis R
Author Exchange Intelligent Design, Abiogenesis, and Learning from History: Dennis R. Venema A Reply to Meyer Dennis R. Venema Weizsäcker’s book The World View of Physics is still keeping me very busy. It has again brought home to me quite clearly how wrong it is to use God as a stop-gap for the incompleteness of our knowledge. If in fact the frontiers of knowledge are being pushed back (and that is bound to be the case), then God is being pushed back with them, and is therefore continually in retreat. We are to find God in what we know, not in what we don’t know; God wants us to realize his presence, not in unsolved problems but in those that are solved. Dietrich Bonhoeffer1 am thankful for this opportunity to nature, is the result of intelligence. More- reply to Stephen Meyer’s criticisms over, this assertion is proffered as the I 2 of my review of his book Signature logical basis for inferring design for the in the Cell (hereafter Signature). Meyer’s origin of biological information: if infor- critiques of my review fall into two gen- mation only ever arises from intelli- eral categories. First, he claims I mistook gence, then the mere presence of Signature for an argument against bio- information demonstrates design. A few logical evolution, rendering several of examples from Signature make the point my arguments superfluous. Secondly, easily: Meyer asserts that I have failed to refute … historical scientists can show that his thesis by not providing a “causally a presently acting cause must have adequate alternative explanation” for the been present in the past because the origin of life in that the few relevant cri- proposed candidate is the only known tiques I do provide are “deeply flawed.” cause of the effect in question. -
The Primordial Earth: Hadean and Archean Eons
5th International Symposium on Strong Electromagnetic Fields and Neutron Stars 10 –13 of May, 2017 -Varadero, Cuba HABITABILITY OF THE MILKY WAY REVISITED Rolando Cárdenas and Rosmery Nodarse-Zulueta e-mail: [email protected] Planetary Science Laboratory Universidad Central “Marta Abreu” de Las Villas, Santa Clara, Cuba Abstract • The discoveries of the last three decades on deep sea and deep crust of planet Earth show that life can thrive in many places where solar radiation does not reach, using chemosynthesis instead of photosynthesis for primary production. • Underground life is relatively well protected from hazardous ionizing cosmic radiation, so above mentioned discoveries reopen the habitability budget of the Milky Way, turning potentially habitable even planetary bodies without atmosphere. • Considering this, in this work the habitability potential of the Milky Way is reconsidered. Energy Sources for Primary Habitability: - Photosynthesis: Electromagnetic Waves, mostly in the range 400-700 nm. Dominant in planetary surface. - Chemosynthesis: Energy released by redox chemical reactions. Dominant in deep sea and crust. Circumstellar Habitable Zone https://en.wikipedia.org/wiki/Circumstellar_habitable_zone. Accessed on 2017.04.28 Liquid water at surface: biased towards surface (photosynthetic) life Chemosynthesis: More common than previously thought… - Any redox process giving at least 20 kJ/mol of free energy can support microbial metabolism. The following gives 794 kJ/mol: Pohlman, J.: The biogeochemistry of anchialine caves: -
Quantum Crystallography†
Chemical Science View Article Online MINIREVIEW View Journal | View Issue Quantum crystallography† Simon Grabowsky,*a Alessandro Genoni*bc and Hans-Beat Burgi*de Cite this: Chem. Sci.,2017,8,4159 ¨ Approximate wavefunctions can be improved by constraining them to reproduce observations derived from diffraction and scattering experiments. Conversely, charge density models, incorporating electron-density distributions, atomic positions and atomic motion, can be improved by supplementing diffraction Received 16th December 2016 experiments with quantum chemically calculated, tailor-made electron densities (form factors). In both Accepted 3rd March 2017 cases quantum chemistry and diffraction/scattering experiments are combined into a single, integrated DOI: 10.1039/c6sc05504d tool. The development of quantum crystallographic research is reviewed. Some results obtained by rsc.li/chemical-science quantum crystallography illustrate the potential and limitations of this field. 1. Introduction today's organic, inorganic and physical chemistry. These tools are usually employed separately. Diffraction and scattering Quantum chemistry methods and crystal structure determina- experiments provide structures at the atomic scale, while the Creative Commons Attribution 3.0 Unported Licence. tion are highly developed research tools, indispensable in techniques of quantum chemistry provide wavefunctions and aUniversitat¨ Bremen, Fachbereich 2 – Biologie/Chemie, Institut fur¨ Anorganische eUniversitat¨ Zurich,¨ Institut fur¨ Chemie, Winterthurerstrasse 190, CH-8057 Zurich,¨ Chemie und Kristallographie, Leobener Str. NW2, 28359 Bremen, Germany. Switzerland E-mail: [email protected] † Dedicated to Prof. Louis J. Massa on the occasion of his 75th birthday and to bCNRS, Laboratoire SRSMC, UMR 7565, Vandoeuvre-l`es-Nancy, F-54506, France Prof. Dylan Jayatilaka on the occasion of his 50th birthday in recognition of their cUniversit´e de Lorraine, Laboratoire SRSMC, UMR 7565, Vandoeuvre-l`es-Nancy, F- pioneering contributions to the eld of X-ray quantum crystallography. -
Bayesian Analysis of the Astrobiological Implications of Life's
Bayesian analysis of the astrobiological implications of life's early emergence on Earth David S. Spiegel ∗ y, Edwin L. Turner y z ∗Institute for Advanced Study, Princeton, NJ 08540,yDept. of Astrophysical Sciences, Princeton Univ., Princeton, NJ 08544, USA, and zInstitute for the Physics and Mathematics of the Universe, The Univ. of Tokyo, Kashiwa 227-8568, Japan Submitted to Proceedings of the National Academy of Sciences of the United States of America Life arose on Earth sometime in the first few hundred million years Any inferences about the probability of life arising (given after the young planet had cooled to the point that it could support the conditions present on the early Earth) must be informed water-based organisms on its surface. The early emergence of life by how long it took for the first living creatures to evolve. By on Earth has been taken as evidence that the probability of abiogen- definition, improbable events generally happen infrequently. esis is high, if starting from young-Earth-like conditions. We revisit It follows that the duration between events provides a metric this argument quantitatively in a Bayesian statistical framework. By (however imperfect) of the probability or rate of the events. constructing a simple model of the probability of abiogenesis, we calculate a Bayesian estimate of its posterior probability, given the The time-span between when Earth achieved pre-biotic condi- data that life emerged fairly early in Earth's history and that, billions tions suitable for abiogenesis plus generally habitable climatic of years later, curious creatures noted this fact and considered its conditions [5, 6, 7] and when life first arose, therefore, seems implications. -
Quantum Reform
feature Quantum reform Leonie Mueck Quantum computers potentially offer a faster way to calculate chemical properties, but the exact implications of this speed-up have only become clear over the last year. The first quantum computers are likely to enable calculations that cannot be performed classically, which might reform quantum chemistry — but we should not expect a revolution. t had been an exhausting day at the 2012 International Congress of Quantum IChemistry with countless presentations reporting faster and more accurate methods for calculating chemical information using computers. In the dry July heat of Boulder, Colorado, a bunch of young researchers decided to end the day with a cool beer, but the scientific discussion didn’t fade away. Thoughts on the pros and cons of all the methods — the approximations they involved and the chemical problems that they could solve — bounced across the table, until somebody said “Anyway, in a few years we will have a quantum computer and our approximate methods will be obsolete”. An eerie silence followed. What a frustrating thought! They were devoting their careers to quantum chemistry — working LIBRARY PHOTO RICHARD KAIL/SCIENCE tirelessly on applying the laws of quantum mechanics to treat complex chemical of them offering a different trade-off between cannot do on a ‘classical’ computer, it does problems with a computer. And in one fell accuracy and computational feasibility. not look like all the conventional quantum- swoop, would all of those efforts be wasted Enter the universal quantum computer. chemical methods will become obsolete or as chemists turn to quantum computers and This dream machine would basically work that quantum chemists will be out of their their enormous computing power? like a normal digital computer; it would jobs in the foreseeable future. -
Origin and Evolution of Carbonaceous Presolar Grains in Stellar Environments
Bernatowicz et al.: Origin and Evolution of Presolar Grains 109 Origin and Evolution of Carbonaceous Presolar Grains in Stellar Environments Thomas J. Bernatowicz Washington University Thomas K. Croat Washington University Tyrone L. Daulton Naval Research Laboratory Laboratory microanalyses of presolar grains provide direct information on the physical and chemical properties of solid condensates that form in the mass outflows from stars. This informa- tion can be used, in conjunction with kinetic models and equilibrium thermodynamics, to draw inferences about condensation sequences, formation intervals, pressures, and temperatures in circumstellar envelopes and in supernova ejecta. We review the results of detailed microana- lytical studies of the presolar graphite, presolar silicon carbide, and nanodiamonds found in primitive meteorites. We illustrate how these investigations, together with astronomical obser- vation and theoretical models, provide detailed information on grain formation and growth that could not be obtained by astronomical observation alone. 1. INTRODUCTION versed the interstellar medium (ISM) prior to their incorpor- ation into the solar nebula, they serve as monitors of physi- In recent years the laboratory study of presolar grains has cal and chemical processing of grains in the ISM (Bernato- emerged as a rich source of astronomical information about wicz et al., 2003). stardust, as well as about the physical and chemical condi- In this review we focus on carbonaceous presolar grains. tions of dust formation in circumstellar -
Closed Network Growth of Fullerenes
ARTICLE Received 9 Jan 2012 | Accepted 18 Apr 2012 | Published 22 May 2012 DOI: 10.1038/ncomms1853 Closed network growth of fullerenes Paul W. Dunk1, Nathan K. Kaiser2, Christopher L. Hendrickson1,2, John P. Quinn2, Christopher P. Ewels3, Yusuke Nakanishi4, Yuki Sasaki4, Hisanori Shinohara4, Alan G. Marshall1,2 & Harold W. Kroto1 Tremendous advances in nanoscience have been made since the discovery of the fullerenes; however, the formation of these carbon-caged nanomaterials still remains a mystery. Here we reveal that fullerenes self-assemble through a closed network growth mechanism by incorporation of atomic carbon and C2. The growth processes have been elucidated through experiments that probe direct growth of fullerenes upon exposure to carbon vapour, analysed by state-of-the-art Fourier transform ion cyclotron resonance mass spectrometry. Our results shed new light on the fundamental processes that govern self-assembly of carbon networks, and the processes that we reveal in this study of fullerene growth are likely be involved in the formation of other carbon nanostructures from carbon vapour, such as nanotubes and graphene. Further, the results should be of importance for illuminating astrophysical processes near carbon stars or supernovae that result in C60 formation throughout the Universe. 1 Department of Chemistry and Biochemistry, Florida State University, 95 Chieftan Way, Tallahassee, Florida 32306, USA. 2 Ion Cyclotron Resonance Program, National High Magnetic Field Laboratory, Florida State University, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, USA. 3 Institut des Matériaux Jean Rouxel, CNRS UMR 6502, Université de Nantes, BP32229 Nantes, France. 4 Department of Chemistry and Institute for Advanced Research, Nagoya University, Nagoya 464-8602, Japan. -
SIDE GROUP ADDITION to the POLYCYCLIC AROMATIC HYDROCARBON CORONENE by PROTON IRRADIATION in COSMIC ICE ANALOGS Max P
The Astrophysical Journal, 582:L25–L29, 2003 January 1 ᭧ 2003. The American Astronomical Society. All rights reserved. Printed in U.S.A. SIDE GROUP ADDITION TO THE POLYCYCLIC AROMATIC HYDROCARBON CORONENE BY PROTON IRRADIATION IN COSMIC ICE ANALOGS Max P. Bernstein,1,2 Marla H. Moore,3 Jamie E. Elsila,4 Scott A. Sandford,2 Louis J. Allamandola,2 and Richard N. Zare4 Received 2002 July 23; accepted 2002 November 5; published 2002 December 6 ABSTRACT ∼ Ices at 15 K consisting of the polycyclic aromatic hydrocarbon coronene (C24H12) condensed either with H2O, CO2, or CO in the ratio of 1 : 100 or greater have been subjected to MeV proton bombardment from a Van de Graaff generator. The resulting reaction products have been examined by infrared transmission- reflection-transmission spectroscopy and by microprobe laser-desorption laser-ionization mass spectrometry. Just as in the case of UV photolysis, oxygen atoms are added to coronene, yielding, in the case of H2O ices, the addition of one or more alcohol (i OH) and ketone (1CuO) side chains to the coronene scaffolding. There are, however, significant differences between the products formed by proton irradiation and the products formed by UV photolysis of coronene containing CO and CO2 ices. The formation of a coronene carboxylic i acid ( COOH) by proton irradiation is facile in solid CO but not in CO2, the reverse of what was previously observed for UV photolysis under otherwise identical conditions. This work presents evidence that cosmic- ray irradiation of interstellar or cometary ices should have contributed to the formation of aromatics bearing ketone and carboxylic acid functional groups in primitive meteorites and interplanetary dust particles. -
Geometric and Electronic Properties of Graphene-Related Systems: Chemical Bondings Arxiv:1702.02031V2 [Physics.Chem-Ph] 13
Geometric and electronic properties of graphene-related systems: Chemical bondings Ngoc Thanh Thuy Trana, Shih-Yang Lina;∗, Chiun-Yan Lina, Ming-Fa Lina;∗ aDepartment of Physics, National Cheng Kung University, Tainan 701, Taiwan February 14, 2017 Abstract This work presents a systematic review of the feature-rich essential properties in graphene-related systems using the first-principles method. The geometric and electronic properties are greatly diversified by the number of layers, the stacking con- figurations, the sliding-created configuration transformation, the rippled structures, and the distinct adatom adsorptions. The top-site adsorptions can induce the signif- icantly buckled structures, especially for hydrogen and fluorine adatoms. The elec- tronic structures consist of the carbon-, adatom- and (carbon, adatom)-dominated energy bands. There exist the linear, parabolic, partially flat, sombrero-shaped and oscillatory band, accompanied with various kinds of critical points. The semi-metallic or semiconducting behaviors of graphene systems are dramatically changed by the multi- or single-orbital chemical bondings between carbons and adatoms. Graphene oxides and hydrogenated graphenes possess the tunable energy gaps. Fluorinated graphenes might be semiconductors or hole-doped metals, while other halogenated systems belong to the latter. Alkali- and Al-doped graphenes exhibit the high-density free electrons in the preserved Dirac cones. The ferromagnetic spin configuration is revealed in hydrogenated and halogenated graphenes under certain distributions. Specifically, Bi nano-structures are formed by the interactions between monolayer arXiv:1702.02031v2 [physics.chem-ph] 13 Feb 2017 graphene and buffer layer. Structure- and adatom-enriched essential properties are compared with the measured results, and potential applications are also discussed. -
Origins of Life: Transition from Geochemistry to Biogeochemistry
December 2016 Volume 12, Number 6 ISSN 1811-5209 Origins of Life: Transition from Geochemistry to Biogeochemistry NITA SAHAI and HUSSEIN KADDOUR, Guest Editors Transition from Geochemistry to Biogeochemistry Staging Life: Warm Seltzer Ocean Incubating Life: Prebiotic Sources Foundation Stones to Life Prebiotic Metal-Organic Catalysts Protometabolism and Early Protocells pub_elements_oct16_1300&icpms_Mise en page 1 13-Sep-16 3:39 PM Page 1 Reproducibility High Resolution igh spatial H Resolution High mass The New Generation Ion Microprobe for Path-breaking Advances in Geoscience U-Pb dating in 91500 zircon, RF-plasma O- source Addressing the growing demand for small scale, high resolution, in situ isotopic measurements at high precision and productivity, CAMECA introduces the IMS 1300-HR³, successor of the internationally acclaimed IMS 1280-HR, and KLEORA which is derived from the IMS 1300-HR³ and is fully optimized for advanced U-Th-Pb mineral dating. • New high brightness RF-plasma ion source greatly improving spatial resolution, reproducibility and throughput • New automated sample loading system with motorized sample height adjustment, significantly increasing analysis precision, ease-of-use and productivity • New UV-light microscope for enhanced optical image resolution (developed by University of Wisconsin, USA) ... and more! Visit www.cameca.com or email [email protected] to request IMS 1300-HR³ and KLEORA product brochures. Laser-Ablation ICP-MS ~ now with CAMECA ~ The Attom ES provides speed and sensitivity optimized for the most demanding LA-ICP-MS applications. Corr. Pb 207-206 - U (238) Recent advances in laser ablation technology have improved signal 2SE error per sample - Pb (206) Combined samples 0.076121 +/- 0.002345 - Pb (207) to background ratios and washout times. -
Quantum Chemistry and Spectroscopy – Spring 2018
CHE 336 – Quantum Chemistry and Spectroscopy – Spring 2018 Instructor: Dr. Jessica Sarver Email: [email protected] Office: HSC 364 (email hours: 8 am – 10 pm) Office Hours: 10am-12pm Tuesday, 2-3pm Wednesday, 10:30-11:30am Friday, or by appointment Course Description (from Westminster undergraduate catalog) Quantum chemistry and spectroscopy is the study of the microscopic behavior of matter and its interaction with electromagnetic radiation. Topics include the formulation and application of quantum mechanical models, atomic and molecular structure, and various spectroscopic techniques. Laboratory activities demonstrate the fundamental principles of physical chemistry. Methods that will be used during the laboratory portion include: polarimetry, UV-Vis and fluorescence spectroscopies, electrochemistry, and computational/molecular modeling. Prerequisites: C- grade in CHE 117 and MTH 152 and PHY 152. Course Outcomes The chemistry major outcomes are: • Describe and explain quantum theory and the three quantum mechanical models of motion. • Describe and explain how these theories/models are applied and incorporated to applications of atomic/molecular structure and spectroscopy. • Describe and explain the principles of four major types of spectroscopy and their applications. • Describe and explain the measurable thermodynamic parameters for physical and chemical processes and equilibria. • Describe and explain how chemical kinetics can be used to investigate time-dependent processes. • Solve mathematical problems based on physical chemical principles and connect the numerical results with these principles. Textbook The text for this course is Physical Chemistry, 10th Ed. by Atkins and de Paula. Readings and problem set questions will be assigned from this text. You are strongly urged to get a copy of this textbook and complete all the assigned readings and homework. -
Issue 47 | Apr 2018
Issue 47 j Apr 2018 . Dear Colleagues, Our April cover is illustrated with a collage of different hydrocarbon structures, in light of the diverse species presented in this issue. The In Focus section, presented by Xiao- Ye Wang, Akimitsu Narita and Klaus Mullen,¨ introduces us to multiple new synthetic pathways for the production of large PAHs. This month’s collection of abstracts presents both PAH research and a broader look into the periphery of PAH research with theory on the treatment of out-of-plane motions, experiments on unimolecular reaction energies, predictions of adsorption and ionization energies of PAHs on water ice, ion implementation in nanodiamonds, study of photon flux in photochemical aerosol experiments, dust in supernovae and their remnants, and PAHs with straight edges and their band intensity ratios in reflection nebulae. We would like to take this opportunity to repeat the news that the JWST cycle 1 proposal deadline has been postponed to early 2019. For those who ran out of time, you have another chance! Other news is the kick-off of the Dutch Astrochemistry Net- work II on Monday 23 April. We are happy with this follow-up of the successful DAN-I programme and look forward to new exciting studies. Do you want to highlight your research, a facility or another topic, please contact us for a possible In Focus. Of course, do not forget to send us your abstracts! We also encourage you to send in your vacancies, conference announcements and more. For publication in the next AstroPAH, see the deadlines below. The Editorial Team Next issue: 17 May 2018.