The Evolution of Plant Architecture in Brassicaceae David A
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Taxa Named in Honor of Ihsan A. Al-Shehbaz
TAXA NAMED IN HONOR OF IHSAN A. AL-SHEHBAZ 1. Tribe Shehbazieae D. A. German, Turczaninowia 17(4): 22. 2014. 2. Shehbazia D. A. German, Turczaninowia 17(4): 20. 2014. 3. Shehbazia tibetica (Maxim.) D. A. German, Turczaninowia 17(4): 20. 2014. 4. Astragalus shehbazii Zarre & Podlech, Feddes Repert. 116: 70. 2005. 5. Bornmuellerantha alshehbaziana Dönmez & Mutlu, Novon 20: 265. 2010. 6. Centaurea shahbazii Ranjbar & Negaresh, Edinb. J. Bot. 71: 1. 2014. 7. Draba alshehbazii Klimeš & D. A. German, Bot. J. Linn. Soc. 158: 750. 2008. 8. Ferula shehbaziana S. A. Ahmad, Harvard Pap. Bot. 18: 99. 2013. 9. Matthiola shehbazii Ranjbar & Karami, Nordic J. Bot. doi: 10.1111/j.1756-1051.2013.00326.x, 10. Plocama alshehbazii F. O. Khass., D. Khamr., U. Khuzh. & Achilova, Stapfia 101: 25. 2014. 11. Alshehbazia Salariato & Zuloaga, Kew Bulletin …….. 2015 12. Alshehbzia hauthalii (Gilg & Muschl.) Salariato & Zuloaga 13. Ihsanalshehbazia Tahir Ali & Thines, Taxon 65: 93. 2016. 14. Ihsanalshehbazia granatensis (Boiss. & Reuter) Tahir Ali & Thines, Taxon 65. 93. 2016. 15. Aubrieta alshehbazii Dönmez, Uǧurlu & M.A.Koch, Phytotaxa 299. 104. 2017. 16. Silene shehbazii S.A.Ahmad, Novon 25: 131. 2017. PUBLICATIONS OF IHSAN A. AL-SHEHBAZ 1973 1. Al-Shehbaz, I. A. 1973. The biosystematics of the genus Thelypodium (Cruciferae). Contrib. Gray Herb. 204: 3-148. 1977 2. Al-Shehbaz, I. A. 1977. Protogyny, Cruciferae. Syst. Bot. 2: 327-333. 3. A. R. Al-Mayah & I. A. Al-Shehbaz. 1977. Chromosome numbers for some Leguminosae from Iraq. Bot. Notiser 130: 437-440. 1978 4. Al-Shehbaz, I. A. 1978. Chromosome number reports, certain Cruciferae from Iraq. -
Bio 308-Course Guide
COURSE GUIDE BIO 308 BIOGEOGRAPHY Course Team Dr. Kelechi L. Njoku (Course Developer/Writer) Professor A. Adebanjo (Programme Leader)- NOUN Abiodun E. Adams (Course Coordinator)-NOUN NATIONAL OPEN UNIVERSITY OF NIGERIA BIO 308 COURSE GUIDE National Open University of Nigeria Headquarters 14/16 Ahmadu Bello Way Victoria Island Lagos Abuja Office No. 5 Dar es Salaam Street Off Aminu Kano Crescent Wuse II, Abuja e-mail: [email protected] URL: www.nou.edu.ng Published by National Open University of Nigeria Printed 2013 ISBN: 978-058-434-X All Rights Reserved Printed by: ii BIO 308 COURSE GUIDE CONTENTS PAGE Introduction ……………………………………......................... iv What you will Learn from this Course …………………............ iv Course Aims ……………………………………………............ iv Course Objectives …………………………………………....... iv Working through this Course …………………………….......... v Course Materials ………………………………………….......... v Study Units ………………………………………………......... v Textbooks and References ………………………………........... vi Assessment ……………………………………………….......... vi End of Course Examination and Grading..................................... vi Course Marking Scheme................................................................ vii Presentation Schedule.................................................................... vii Tutor-Marked Assignment ……………………………….......... vii Tutors and Tutorials....................................................................... viii iii BIO 308 COURSE GUIDE INTRODUCTION BIO 308: Biogeography is a one-semester, 2 credit- hour course in Biology. It is a 300 level, second semester undergraduate course offered to students admitted in the School of Science and Technology, School of Education who are offering Biology or related programmes. The course guide tells you briefly what the course is all about, what course materials you will be using and how you can work your way through these materials. It gives you some guidance on your Tutor- Marked Assignments. There are Self-Assessment Exercises within the body of a unit and/or at the end of each unit. -
Evolutionary Footprints of a Cold Relic in a Rapidly Warming World
bioRxiv preprint doi: https://doi.org/10.1101/2021.07.11.451959; this version posted July 12, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 TITLE 2 Evolutionary footprints of a cold relic in a rapidly warming world 3 4 Eva M. Wolf1, Emmanuel Gaquerel1,2, Mathias Scharmann3, Levi Yant4, and Marcus A. Koch1* 5 6 1 Centre for Organismal Studies, University of Heidelberg, Im Neuenheimer Feld 345, 69120 7 Heidelberg, Germany 8 2 Present address: Institut de Biologie Moléculaire des Plantes CNRS UPR2357, Université de 9 Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France 10 3 Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland 11 4 Future Food Beacon and School of Life Sciences, the University of Nottingham, Nottingham, UK 12 13 *Author for correspondence 14 Email: [email protected] 15 16 17 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.07.11.451959; this version posted July 12, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 18 Abstract 19 With accelerating global warming, understanding the evolutionary dynamics of plant adaptation to 20 environmental change is increasingly urgent. Here we reveal the enigmatic history of the genus 21 Cochlearia (Brassicaceae), a Pleistocene relic that originated from a drought-adapted Mediterranean 22 sister genus during the Miocene. -
Nested Whole-Genome Duplications Coincide with Diversification And
ARTICLE https://doi.org/10.1038/s41467-020-17605-7 OPEN Nested whole-genome duplications coincide with diversification and high morphological disparity in Brassicaceae Nora Walden 1,7, Dmitry A. German 1,5,7, Eva M. Wolf 1,7, Markus Kiefer 1, Philippe Rigault 1,2, Xiao-Chen Huang 1,6, Christiane Kiefer 1, Roswitha Schmickl3, Andreas Franzke 1, Barbara Neuffer4, ✉ Klaus Mummenhoff4 & Marcus A. Koch 1 1234567890():,; Angiosperms have become the dominant terrestrial plant group by diversifying for ~145 million years into a broad range of environments. During the course of evolution, numerous morphological innovations arose, often preceded by whole genome duplications (WGD). The mustard family (Brassicaceae), a successful angiosperm clade with ~4000 species, has been diversifying into many evolutionary lineages for more than 30 million years. Here we develop a species inventory, analyze morphological variation, and present a maternal, plastome-based genus-level phylogeny. We show that increased morphological disparity, despite an apparent absence of clade-specific morphological innovations, is found in tribes with WGDs or diversification rate shifts. Both are important processes in Brassicaceae, resulting in an overall high net diversification rate. Character states show frequent and independent gain and loss, and form varying combinations. Therefore, Brassicaceae pave the way to concepts of phy- logenetic genome-wide association studies to analyze the evolution of morphological form and function. 1 Centre for Organismal Studies, University of Heidelberg, Im Neuenheimer Feld 345, 69120 Heidelberg, Germany. 2 GYDLE, 1135 Grande Allée Ouest, Québec, QC G1S 1E7, Canada. 3 Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01, Prague, Czech Republic. -
Biogeography and Diversification of Brassicales
Molecular Phylogenetics and Evolution 99 (2016) 204–224 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Biogeography and diversification of Brassicales: A 103 million year tale ⇑ Warren M. Cardinal-McTeague a,1, Kenneth J. Sytsma b, Jocelyn C. Hall a, a Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada b Department of Botany, University of Wisconsin, Madison, WI 53706, USA article info abstract Article history: Brassicales is a diverse order perhaps most famous because it houses Brassicaceae and, its premier mem- Received 22 July 2015 ber, Arabidopsis thaliana. This widely distributed and species-rich lineage has been overlooked as a Revised 24 February 2016 promising system to investigate patterns of disjunct distributions and diversification rates. We analyzed Accepted 25 February 2016 plastid and mitochondrial sequence data from five gene regions (>8000 bp) across 151 taxa to: (1) Available online 15 March 2016 produce a chronogram for major lineages in Brassicales, including Brassicaceae and Arabidopsis, based on greater taxon sampling across the order and previously overlooked fossil evidence, (2) examine Keywords: biogeographical ancestral range estimations and disjunct distributions in BioGeoBEARS, and (3) determine Arabidopsis thaliana where shifts in species diversification occur using BAMM. The evolution and radiation of the Brassicales BAMM BEAST began 103 Mya and was linked to a series of inter-continental vicariant, long-distance dispersal, and land BioGeoBEARS bridge migration events. North America appears to be a significant area for early stem lineages in the Brassicaceae order. Shifts to Australia then African are evident at nodes near the core Brassicales, which diverged Cleomaceae 68.5 Mya (HPD = 75.6–62.0). -
Illustrated Flora of East Texas Illustrated Flora of East Texas
ILLUSTRATED FLORA OF EAST TEXAS ILLUSTRATED FLORA OF EAST TEXAS IS PUBLISHED WITH THE SUPPORT OF: MAJOR BENEFACTORS: DAVID GIBSON AND WILL CRENSHAW DISCOVERY FUND U.S. FISH AND WILDLIFE FOUNDATION (NATIONAL PARK SERVICE, USDA FOREST SERVICE) TEXAS PARKS AND WILDLIFE DEPARTMENT SCOTT AND STUART GENTLING BENEFACTORS: NEW DOROTHEA L. LEONHARDT FOUNDATION (ANDREA C. HARKINS) TEMPLE-INLAND FOUNDATION SUMMERLEE FOUNDATION AMON G. CARTER FOUNDATION ROBERT J. O’KENNON PEG & BEN KEITH DORA & GORDON SYLVESTER DAVID & SUE NIVENS NATIVE PLANT SOCIETY OF TEXAS DAVID & MARGARET BAMBERGER GORDON MAY & KAREN WILLIAMSON JACOB & TERESE HERSHEY FOUNDATION INSTITUTIONAL SUPPORT: AUSTIN COLLEGE BOTANICAL RESEARCH INSTITUTE OF TEXAS SID RICHARDSON CAREER DEVELOPMENT FUND OF AUSTIN COLLEGE II OTHER CONTRIBUTORS: ALLDREDGE, LINDA & JACK HOLLEMAN, W.B. PETRUS, ELAINE J. BATTERBAE, SUSAN ROBERTS HOLT, JEAN & DUNCAN PRITCHETT, MARY H. BECK, NELL HUBER, MARY MAUD PRICE, DIANE BECKELMAN, SARA HUDSON, JIM & YONIE PRUESS, WARREN W. BENDER, LYNNE HULTMARK, GORDON & SARAH ROACH, ELIZABETH M. & ALLEN BIBB, NATHAN & BETTIE HUSTON, MELIA ROEBUCK, RICK & VICKI BOSWORTH, TONY JACOBS, BONNIE & LOUIS ROGNLIE, GLORIA & ERIC BOTTONE, LAURA BURKS JAMES, ROI & DEANNA ROUSH, LUCY BROWN, LARRY E. JEFFORDS, RUSSELL M. ROWE, BRIAN BRUSER, III, MR. & MRS. HENRY JOHN, SUE & PHIL ROZELL, JIMMY BURT, HELEN W. JONES, MARY LOU SANDLIN, MIKE CAMPBELL, KATHERINE & CHARLES KAHLE, GAIL SANDLIN, MR. & MRS. WILLIAM CARR, WILLIAM R. KARGES, JOANN SATTERWHITE, BEN CLARY, KAREN KEITH, ELIZABETH & ERIC SCHOENFELD, CARL COCHRAN, JOYCE LANEY, ELEANOR W. SCHULTZE, BETTY DAHLBERG, WALTER G. LAUGHLIN, DR. JAMES E. SCHULZE, PETER & HELEN DALLAS CHAPTER-NPSOT LECHE, BEVERLY SENNHAUSER, KELLY S. DAMEWOOD, LOGAN & ELEANOR LEWIS, PATRICIA SERLING, STEVEN DAMUTH, STEVEN LIGGIO, JOE SHANNON, LEILA HOUSEMAN DAVIS, ELLEN D. -
Species Status Assessment Report for the Kentucky Glade Cress (Leavenworthia Exigua Var
Species Status Assessment Report for the Kentucky Glade Cress (Leavenworthia exigua var. laciniata) Version 1.0 Christy Edwards, Missouri Botanical Garden August 2020 U.S. Fish and Wildlife Service Atlanta Regional Office ACKNOWLEDGEMENTS This document was prepared by the U.S. Fish and Wildlife Service’s Kentucky glade cress Species Status Assessment Core Team: Stephanie DeMay (Texas A&M Natural Resources Institute), Jessica Miller (USFWS), Lindsay Dombroskie (Texas A&M Natural Resources Institute), Jonathan Wardell (USFWS) and Drew Becker (USFWS). We would also like to recognize and thank the following individuals who served on the expert team for this SSA and provided substantive information and/or insights, valuable input into the analysis, and/or reviews of a draft of this document: Laura Darnell (Redwing Ecological Services, Inc.), Christy Edwards (Missouri Botanical Garden), Jennifer Koslow (Eastern Kentucky University), and Tara Littlefield (Office of Kentucky Nature Preserves). Further peer review was provided by James Beck (Wichita State University), Todd Crabtree (Tennessee Department of Environment and Conservation Natural Heritage Program), and Alfred Schotz (Auburn University Alabama Natural Heritage Program). We appreciate their input and comments, which resulted in a more robust status assessment and final report. Suggested reference: U.S. Fish and Wildlife Service. 2020. Species status assessment report for the Kentucky Glade Cress (Leavenworthia exigua var. laciniata), Version 1.0. August 2020. Atlanta, GA. SSA Report – Kentucky Glade Cress ii August 2020 VERSION UPDATES SSA Report – Kentucky Glade Cress iii August 2020 EXECUTIVE SUMMARY Leavenworthia exigua var. laciniata (Kentucky glade cress) is a winter annual herbaceous plant in the mustard family (Brassicaceae) known only from Bullitt and Jefferson Counties, Kentucky. -
Evolutionary Genetics of Core Eudicot Inflorescence and Flower Development
® International Journal of Plant Developmental Biology ©2010 Global Science Books Evolutionary Genetics of Core Eudicot Inflorescence and Flower Development Jill C. Preston* Department of Ecology and Evolutionary Biology, University of Kansas, 1200 Sunnyside Avenue, Lawrence, KS 66045, USA Corresponding author : * [email protected] ABSTRACT The genetic basis of flowering is best understood in the model core eudicot species Arabidopsis thaliana (Brassicaceae), and involves the genetic reprogramming of shoot apical meristems, ending in the production of flowers. Although inflorescences and flowers of core eudicots share a common ground plan, variation in architecture, shape and ornamentation suggests repeated modifications to this ancestral plan. Comparative studies, primarily in Brassicaceae and Leguminoseae (rosids), and Asteraceae, Plantaginaceae and Solanaceae (asterids), have revealed a common developmental framework for flowering across core eudicots. This serves as a basis for understanding genetic changes that underlie the diversification of inflorescence and floral form. Recent work is starting to reveal the relative importance of regulatory versus protein coding changes in genes involved in diversification of inflorescence and flower development across core eudicots. Furthermore, these studies highlight the importance of phylogenetic history for understanding functional conservation of duplicated genes. _____________________________________________________________________________________________________________ Keywords: Antirrhinum -
Mathews and Kramer FINAL
The evolution of reproductive structures in seed plants: a re-examination based on insights from developmental genetics The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Mathews, Sarah, and Elena M. Kramer. 2012. “The Evolution of Reproductive Structures in Seed Plants: a Re-Examination Based on Insights from Developmental Genetics.” New Phytologist 194 (4) (June): 910–923. Published Version doi:10.1111/j.1469-8137.2012.04091.x Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:11828628 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Open Access Policy Articles, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#OAP The evolution of reproductive structures in seed plants: a re-examination based on insights from developmental genetics. Sarah Mathews1 and Elena M. Kramer2 1Arnold Arboretum, Harvard University, 1300 Centre Street, Boston, MA 02131 2Dept. of Organismic and Evolutionary Biology, Harvard University, 16 Divinity Ave., Cambridge, MA Joint authors for correspondence: Elena M. Kramer, (tel) 1-617-496-3460, email: [email protected]; Sarah Mathews, (tel) 617-495-2331, email [email protected]. 1 Contents Summary I. Introduction II. Transformation and transference in angiosperm developmental genetics III. Implications for understanding patterns of seed plant evolution IV. Understanding the origin of the flower V. Conclusions Acknowledgements References 2 Summary The study of developmental genetics is providing insights into how plant morphology can and does evolve, and into the fundamental nature of specific organs. -
A Chromosome-Scale Reference Genome of Lobularia Maritima, An
Huang et al. Horticulture Research (2020) 7:197 Horticulture Research https://doi.org/10.1038/s41438-020-00422-w www.nature.com/hortres ARTICLE Open Access A chromosome-scale reference genome of Lobularia maritima, an ornamental plant with high stress tolerance Li Huang1,YazhenMa1, Jiebei Jiang1,TingLi1, Wenjie Yang1,LeiZhang1,LeiWu1,LandiFeng1, Zhenxiang Xi1, Xiaoting Xu1, Jianquan Liu 1,2 and Quanjun Hu 1 Abstract Lobularia maritima (L.) Desv. is an ornamental plant cultivated across the world. It belongs to the family Brassicaceae and can tolerate dry, poor and contaminated habitats. Here, we present a chromosome-scale, high-quality genome assembly of L. maritima based on integrated approaches combining Illumina short reads and Hi–C chromosome conformation data. The genome was assembled into 12 pseudochromosomes with a 197.70 Mb length, and it includes 25,813 protein-coding genes. Approximately 41.94% of the genome consists of repetitive sequences, with abundant long terminal repeat transposable elements. Comparative genomic analysis confirmed that L. maritima underwent a species-specific whole-genome duplication (WGD) event ~22.99 million years ago. We identified ~1900 species-specific genes, 25 expanded gene families, and 50 positively selected genes in L. maritima. Functional annotations of these genes indicated that they are mainly related to stress tolerance. These results provide new insights into the stress tolerance of L. maritima, and this genomic resource will be valuable for further genetic improvement of this important ornamental plant. 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; Introduction ancestral species, WGDs can also promote reproductive Whole-genome duplication (WGD), or polyploidy, has isolation and thus facilitate speciation13. -
Ovule Ratio, but No Changes in Flower Shape in Selfing Populations of The
Erschienen in: Oecologia ; 183 (2017), 2. - S. 401-413 https://dx.doi.org/10.1007/s00442-016-3773-4 Small reductions in corolla size and pollen: ovule ratio, but no changes in flower shape in selfing populations of the North American Arabidopsis lyrata Samuel Carleial1 · Mark van Kleunen1 · Marc Stift1 Abstract The shift from outcrossing to selfing is often Introduction accompanied by striking changes in floral morphology towards a “selfing syndrome”, which is characterized by Self-incompatibility is reported over 100 plant families, flowers with reduction in size, pollen: ovule (P/O) ratio, and about half of all flowering plants possess a molecular and herkogamy. This study aims to test whether such self-incompatibility system (Raduski et al. 2012). At the changes have occurred in the North American Arabidopsis same time, the breakdown of self-incompatibility is very lyrata, which is of particular interest because of the rela- frequent (Igic et al. 2008). This has repeatedly given rise tively recent transitions to selfing in this system. Flower to the rapid evolution of self-fertilising (selfing) species, size, flower shape, herkogamy levels, P/O ratio, and flo- many of which exhibit the typical selfing syndrome, char- ral integration of six self-incompatible (outcrossing) and acterized by relatively small and inconspicuous flowers, six self-compatible (selfing) populations of A. lyrata were reduced herkogamy, and reduced pollen:ovule (P/O) ratios measured in a common environment using conventional (reviewed in Sicard and Lenhard 2011). For example, the and geometric morphometrics methods. Although selfers selfing Capsella rubella (Brassicaceae) evolved from its had on average 9.2% smaller corollas, 8.4% longer pistils, outcrossing ancestor C. -
Ecological Checklist of the Missouri Flora for Floristic Quality Assessment
Ladd, D. and J.R. Thomas. 2015. Ecological checklist of the Missouri flora for Floristic Quality Assessment. Phytoneuron 2015-12: 1–274. Published 12 February 2015. ISSN 2153 733X ECOLOGICAL CHECKLIST OF THE MISSOURI FLORA FOR FLORISTIC QUALITY ASSESSMENT DOUGLAS LADD The Nature Conservancy 2800 S. Brentwood Blvd. St. Louis, Missouri 63144 [email protected] JUSTIN R. THOMAS Institute of Botanical Training, LLC 111 County Road 3260 Salem, Missouri 65560 [email protected] ABSTRACT An annotated checklist of the 2,961 vascular taxa comprising the flora of Missouri is presented, with conservatism rankings for Floristic Quality Assessment. The list also provides standardized acronyms for each taxon and information on nativity, physiognomy, and wetness ratings. Annotated comments for selected taxa provide taxonomic, floristic, and ecological information, particularly for taxa not recognized in recent treatments of the Missouri flora. Synonymy crosswalks are provided for three references commonly used in Missouri. A discussion of the concept and application of Floristic Quality Assessment is presented. To accurately reflect ecological and taxonomic relationships, new combinations are validated for two distinct taxa, Dichanthelium ashei and D. werneri , and problems in application of infraspecific taxon names within Quercus shumardii are clarified. CONTENTS Introduction Species conservatism and floristic quality Application of Floristic Quality Assessment Checklist: Rationale and methods Nomenclature and taxonomic concepts Synonymy Acronyms Physiognomy, nativity, and wetness Summary of the Missouri flora Conclusion Annotated comments for checklist taxa Acknowledgements Literature Cited Ecological checklist of the Missouri flora Table 1. C values, physiognomy, and common names Table 2. Synonymy crosswalk Table 3. Wetness ratings and plant families INTRODUCTION This list was developed as part of a revised and expanded system for Floristic Quality Assessment (FQA) in Missouri.