How to Make a Protostome
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CV Elaine Seaver, Ph.D
ELAINE C. SEAVER, Ph.D. Professor of Biology My research interests are in the areas of developmental biology, evolution of development, and regeneration. I have been trained in the fields of molecular biology, developmental neurobiology and embryology. I am broadly interested in the cellular and molecular control of patterning during development and regeneration. Many of our studies have utilized marine annelids, which exhibit a highly stereotypic early developmental program, and have robust regenerative abilities. My lab has pioneered the use of the annelid Capitella teleta as a model for development and regeneration studies. We have established several cellular, molecular and imaging techniques for this animal including microinjection, laser deletion, and functional manipulations. I am an expert in animal husbandry of C. teleta, and have optimized conditions to maximize reproduction output. I was instrumental in getting a completely sequenced and annotated genome for Capitella by the Joint Genome Institute, which has facilitated our molecular investigations of the development and regeneration of this species. Our current areas of focus include evolution of cell lineages, regeneration of the germline, and investigating the relationship between development and regeneration. Our longterm goals are to understand how developmental programs evolve and how changes in the developmental program lead to the diversity of animals. Education: 1995 Ph.D. in Biology, University of Utah 1986 B.S. in Biology, McGill University Professional Experience: -
Zoosymposia 2: 25–53 (2009) ISSN 1178-9905 (Print Edition) ZOOSYMPOSIA Copyright © 2009 · Magnolia Press ISSN 1178-9913 (Online Edition)
Zoosymposia 2: 25–53 (2009) ISSN 1178-9905 (print edition) www.mapress.com/zoosymposia/ ZOOSYMPOSIA Copyright © 2009 · Magnolia Press ISSN 1178-9913 (online edition) Capitella teleta, a new species designation for the opportunistic and experimental Capitella sp. I, with a review of the literature for confirmed records JAMES A. BLAKE1,4, JUDITH P. GRASSLE2 & KEVIN J. ECKELBARGER3 1Marine & Coastal Center, AECOM Environment, Woods Hole, MA 02543 USA. E-mail: [email protected] 2Institute of Marine & Coastal Sciences, Rutgers University, New Brunswick, NJ 08901 USA. E-mail: [email protected] 3Darling Marine Center, University of Maine, Walpole, ME 04573 USA. E-mail: [email protected] 4Corresponding author Abstract This paper provides a morphological description of Capitella teleta sp. nov., an opportunistic capitellid that is also commonly used as an experimental polychaete under the provisional designation Capitella sp. I. The species is widely distributed along the east and west coasts of North America and also reported from Japan and the Mediterranean. The species belongs to a group having distinct sexual dimorphism, yet with hermaphrodites occurring under certain conditions. Morphologically, C. teleta has a long, narrow body, with all thoracic segments similar except for sexual modifications on setigers 8–9; the prostomium/peristomium combined are long, narrow and about 2.5 times as long as setiger 1. Capillary setae are present in noto- and neuropodia of setigers 1–7; setigers 8–9 have hooded hooks in noto- and neuropodia of females; genital spines replace notopodial hooks in males. A methyl green staining pattern is limited to some thoracic setigers of females; males lack a distinct staining pattern. -
Animal Phylum Poster Porifera
Phylum PORIFERA CNIDARIA PLATYHELMINTHES ANNELIDA MOLLUSCA ECHINODERMATA ARTHROPODA CHORDATA Hexactinellida -- glass (siliceous) Anthozoa -- corals and sea Turbellaria -- free-living or symbiotic Polychaetes -- segmented Gastopods -- snails and slugs Asteroidea -- starfish Trilobitomorpha -- tribolites (extinct) Urochordata -- tunicates Groups sponges anemones flatworms (Dugusia) bristleworms Bivalves -- clams, scallops, mussels Echinoidea -- sea urchins, sand Chelicerata Cephalochordata -- lancelets (organisms studied in detail in Demospongia -- spongin or Hydrazoa -- hydras, some corals Trematoda -- flukes (parasitic) Oligochaetes -- earthworms (Lumbricus) Cephalopods -- squid, octopus, dollars Arachnida -- spiders, scorpions Mixini -- hagfish siliceous sponges Xiphosura -- horseshoe crabs Bio1AL are underlined) Cubozoa -- box jellyfish, sea wasps Cestoda -- tapeworms (parasitic) Hirudinea -- leeches nautilus Holothuroidea -- sea cucumbers Petromyzontida -- lamprey Mandibulata Calcarea -- calcareous sponges Scyphozoa -- jellyfish, sea nettles Monogenea -- parasitic flatworms Polyplacophora -- chitons Ophiuroidea -- brittle stars Chondrichtyes -- sharks, skates Crustacea -- crustaceans (shrimp, crayfish Scleropongiae -- coralline or Crinoidea -- sea lily, feather stars Actinipterygia -- ray-finned fish tropical reef sponges Hexapoda -- insects (cockroach, fruit fly) Sarcopterygia -- lobed-finned fish Myriapoda Amphibia (frog, newt) Chilopoda -- centipedes Diplopoda -- millipedes Reptilia (snake, turtle) Aves (chicken, hummingbird) Mammalia -
The Effects of Temperature on Hemoglobin in Capitella Teleta
THE EFFECTS OF TEMPERATURE ON HEMOGLOBIN IN CAPITELLA TELETA by Alexander M. Barclay A thesis submitted to the Faculty of the University of Delaware in partial fulfillment of the requirements for the degree of Master of Science in Marine Studies Summer 2013 c 2013 Alexander M. Barclay All Rights Reserved THE EFFECTS OF TEMPERATURE ON HEMOGLOBIN IN CAPITELLA TELETA by Alexander M. Barclay Approved: Adam G. Marsh, Ph.D. Professor in charge of thesis on behalf of the Advisory Committee Approved: Mark A. Moline, Ph.D. Director of the School of Marine Science and Policy Approved: Nancy M. Targett, Ph.D. Dean of the College of Earth, Ocean, and Environment Approved: James G. Richards, Ph.D. Vice Provost for Graduate and Professional Education ACKNOWLEDGMENTS I extend my sincere gratitude to the individuals that either contributed to the execution of my thesis project or to my experience here at the University of Delaware. I would like to give special thanks to my adviser, Adam Marsh, who afforded me an opportunity that exceeded all of my prior expectations. Adam will say that I worked very independently and did not require much guidance, but he served as an inspiration and a role model for me during my studies. Adam sincerely cares for each of his students and takes the time and thought to tailor his research program to fit each person's interests. The reason that I initially chose to work in Adam's lab was that he expressed a genuine excitement for science and for his lifes work. His enthusiasm resonated with me and helped me to find my own exciting path in science. -
Molecular Phylogeny of the Family Capitellidae (Annelida)
Title Molecular Phylogeny of the Family Capitellidae (Annelida) Author(s) Tomioka, Shinri; Kakui, Keiichi; Kajihara, Hiroshi Zoological Science, 35(5), 436-445 Citation https://doi.org/10.2108/zs180009 Issue Date 2018-10 Doc URL http://hdl.handle.net/2115/75605 Type article File Information Zoological Science35-5_436‒445(2018).pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP ZOOLOGICAL436 SCIENCE 35: 436–445 (2018) S. Tomioka et al. © 2018 Zoological Society of Japan Molecular Phylogeny of the Family Capitellidae (Annelida) Shinri Tomioka1*, Keiichi Kakui2, and Hiroshi Kajihara2 1Rishiri Town Museum, Senhoshi, Rishiri Is., Hokkaido 097-0311, Japan 2Department of Biological Sciences, Faculty of Science, Hokkaido University, N10 W8, Sapporo, Hokkaido 060-0810, Japan Capitellids have emerged as monophyletic in most but not all recent molecular phylogenies, indi- cating that more extensive taxon sampling is necessary. In addition, monophyly of most or all capitellid genera was questionable, as some diagnostic characters vary ontogenetically within individuals. We tested the monophyly of Capitellidae and eight capitellid genera using phyloge- netic analyses of combined 18S, 28S, H3, and COI gene sequences from 36 putative capitellid spe- cies. In our trees, Capitellidae formed a monophyletic sister group to Echiura, and Capitella was also monophyletic, separated by a long branch from other capitellids. Well-supported clades each containing representatives of different genera, or containing a subset of species within a genus, indicated that Barantolla, Heteromastus, and Notomastus are likely not monophyletic. We mapped three morphological characters traditionally used to define capitellid genera (head width relative to width of first segment, number of thoracic segments, and number of segments with capillary chae- tae) onto our tree. -
BIOSC 041 Overview of Animal Diversity: Animal Body Plans
BIOSC 041 Overview of Animal Diversity: Animal Body Plans Reference: Chapter 32 Outline v Definition and major characteristics of animals v Dividing animals into groups based on: § Body symmetry § Tissues § Type of body cavity § Protostome vs deuterostome development v Animal Phylogeny What is an Animal? v Scientists have identified 1.3 million living species of animals v The definition of an animal § Multicellular § Heterotrophic eukaryotes § Possess tissues that develop from embryonic layers v Common characteristics describe the group 1. Common mode of nutrition 2. Cell structure and specialization 3. Reproduction and development 1. Characteristics of Animals: Nutrition v Animals are heterotrophs (“other-eater”) § Obtain nutrition either from other living organisms or from nonliving organic material § Primary consumers (herbivores), secondary consumers (eat herbivores), tertiary consumers (eat carnivores), and/or detritovores (eat detritus- decaying plants/ animals, feces) 2. Characteristics of Animals: Cell Structure and Specialization 1. Animals are multicellular eukaryotes (Note: single-celled eukaryotes with animal-like behavior are grouped as Protists, such as amoeba) 2. Animal cells lack cell walls 3. Bodies are held together by structural proteins like collagen 4. Bodies are organized into tissues, organs, and organ systems § Tissues are groups of cells that have a common structure, and/or function § Nervous tissue and muscle tissue are unique to animals Amoeba: a protist, not a true animal 3. Characteristics of Animals: Reproduction and Development v Most animals reproduce sexually, with the diploid stage dominating the life cycle v Development occurs in specific stages 1. Fertilization to form zygote 2. Zygote undergoes rapid cell division called cleavage 3. Cleavage leads to formation of a multicellular, hollow blastula (ex: whitefish blastula slides from lab, with cells undergoing rapid mitosis) 4. -
Analysis of the Complete Mitochondrial DNA Sequence of the Brachiopod Terebratulina Retusa Places Brachiopoda Within the Protostomes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/12415870 Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes Article in Proceedings of the Royal Society B: Biological Sciences · November 1999 DOI: 10.1098/rspb.1999.0885 · Source: PubMed CITATIONS READS 83 50 2 authors, including: Martin Schlegel University of Leipzig 151 PUBLICATIONS 2,931 CITATIONS SEE PROFILE Some of the authors of this publication are also working on these related projects: Rare for a reason? Scale-dependence of factors influencing rarity and diversity of xylobiont beetles View project Bat diversity and vertical niche activity in the fluvial flood forest Leipzig View project All content following this page was uploaded by Martin Schlegel on 22 May 2014. The user has requested enhancement of the downloaded file. Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes Alexandra Stechmann* and Martin Schlegel UniversitÌt Leipzig, Institut fÏr Zoologie/Spezielle Zoologie,Talstr. 33, 04103 Leipzig, Germany Brachiopod phylogeny is still a controversial subject. Analyses using nuclear 18SrRNA and mitochondrial 12SrDNA sequences place them within the protostomes but some recent interpretations of morphological data support a relationship with deuterostomes. In order to investigate brachiopod a¤nities within the metazoa further,we compared the gene arrangement on the brachiopod mitochondrial genome with several metazoan taxa. The complete (15 451bp) mitochondrial DNA (mtDNA) sequence of the articulate brachiopod Terebratulina retusa was determined from two overlapping long polymerase chain reaction products. All the genes are encoded on the same strand and gene order comparisons showed that only one major rearrangement is required to interconvert the T.retusa and Katharina tunicata (Mollusca: Polyplaco- phora) mitochondrial genomes. -
Tropical Marine Invertebrates CAS BI 569 Phylum ANNELIDA by J
Tropical Marine Invertebrates CAS BI 569 Phylum ANNELIDA by J. R. Finnerty Phylum ANNELIDA Porifera Ctenophora Cnidaria Deuterostomia Ecdysozoa Lophotrochozoa Chordata Arthropoda Annelida Hemichordata Onychophora Mollusca Echinodermata Nematoda Platyhelminthes Acoelomorpha Silicispongiae Calcispongia PROTOSTOMIA “BILATERIA” (=TRIPLOBLASTICA) Bilateral symmetry (?) Mesoderm (triploblasty) Phylum ANNELIDA Porifera Ctenophora Cnidaria Deuterostomia Ecdysozoa Lophotrochozoa Chordata Arthropoda Annelida Hemichordata Onychophora Mollusca Echinodermata Nematoda Platyhelminthes Acoelomorpha Silicispongiae Calcispongia PROTOSTOMIA “COELOMATA” True coelom Coelomata gut cavity endoderm mesoderm coelom ectoderm [note: dorso-ventral inversion] Phylum ANNELIDA Porifera Ctenophora Cnidaria Deuterostomia Ecdysozoa Lophotrochozoa Chordata Arthropoda Annelida Hemichordata Onychophora Mollusca Echinodermata Nematoda Platyhelminthes Acoelomorpha Silicispongiae Calcispongia PROTOSTOMIA PROTOSTOMIA “first mouth” blastopore contributes to mouth ventral nerve cord The Blastopore ! Forms during gastrulation ectoderm blastocoel blastocoel endoderm gut blastoderm BLASTULA blastopore The Gut “internal, epithelium-lined cavity for the digestion and absorption of food sponges lack a gut simplest gut = blind sac (Cnidaria) blastopore gives rise to dual- function mouth/anus through-guts evolve later Protostome = blastopore contributes to the mouth Deuterostome = blastopore becomes the anus; mouth is a second opening Protostomy blastopore mouth anus Deuterostomy blastopore -
Non-Collinear Hox Gene Expression in Bivalves and the Evolution
www.nature.com/scientificreports OPEN Non‑collinear Hox gene expression in bivalves and the evolution of morphological novelties in mollusks David A. Salamanca‑Díaz1, Andrew D. Calcino1, André L. de Oliveira2 & Andreas Wanninger 1* Hox genes are key developmental regulators that are involved in establishing morphological features during animal ontogeny. They are commonly expressed along the anterior–posterior axis in a staggered, or collinear, fashion. In mollusks, the repertoire of body plans is widely diverse and current data suggest their involvement during development of landmark morphological traits in Conchifera, one of the two major lineages that comprises those taxa that originated from a uni‑shelled ancestor (Monoplacophora, Gastropoda, Cephalopoda, Scaphopoda, Bivalvia). For most clades, and bivalves in particular, data on Hox gene expression throughout ontogeny are scarce. We thus investigated Hox expression during development of the quagga mussel, Dreissena rostriformis, to elucidate to which degree they might contribute to specifc phenotypic traits as in other conchiferans. The Hox/ParaHox complement of Mollusca typically comprises 14 genes, 13 of which are present in bivalve genomes including Dreissena. We describe here expression of 9 Hox genes and the ParaHox gene Xlox during Dreissena development. Hox expression in Dreissena is frst detected in the gastrula stage with widely overlapping expression domains of most genes. In the trochophore stage, Hox gene expression shifts towards more compact, largely mesodermal domains. Only few of these domains can be assigned to specifc developing morphological structures such as Hox1 in the shell feld and Xlox in the hindgut. We did not fnd traces of spatial or temporal staggered expression of Hox genes in Dreissena. -
A Note from the Chair... Newsletter Contents in These Unprecedented Times, It Is with a » Letter from Dept Chair Rob Drewell Pg
Newsletter Fall 2020 A Note from the Chair... Newsletter Contents In these unprecedented times, it is with a » Letter from Dept Chair Rob Drewell Pg. 1 sense of pride that I have the opportunity to write the opening note for the inaugu- » Thank you Drs. Foster & Baker Pg. 2 ral Biology Department newsletter. The » Undergraduate News Pg. 3 new bi-annual Newsletter will highlight » Graduate Student News Pg. 4 the recent events and achievements in » Alumni Spotlight Pg. 5 our community. The intention is to help » connect all our various stakeholders to Faculty News Pg. 6 the Department, including current under- » Post Doc News Pg. 7 graduate and graduate students, alumni, » Staff News Pg. 8 and past and present staff and faculty. As might be expected, 2020 has been a significant and challenging year for faculty members are detailed later in this newsletter. Needless to say, the Department. The ongoing impact of the Covid-19 pandemic has been they will be sorely missed. felt in our teaching and research activities in a way that most of us couldn’t have imagined just a year ago. I have been incredibly impressed by the ability We had the opportunity to welcome two new tenure-track faculty to of students and faculty alike to adapt to the new normal of hybrid teaching our department at the start of the fall semester. Jackie Dresch joins us as modalities, whether operating in online classrooms or with reduced capacity an Associate Professor of Mathematical Biology after previous appoint- in-person courses and labs. I believe this admirable and energetic response ments in Mathematics and Computer Science at Clark and Amherst is indicative of the strength of our Department and the unifying sense of College. -
Zoosymposia 2,Capitella Teleta, a New Species
Zoosymposia 2: 25–53 (2009) ISSN 1178-9905 (print edition) www.mapress.com/zoosymposia/ ZOOSYMPOSIA Copyright © 2009 · Magnolia Press ISSN 1178-9913 (online edition) Capitella teleta, a new species designation for the opportunistic and experimental Capitella sp. I, with a review of the literature for confirmed records JAMES A. BLAKE1,4, JUDITH P. GRASSLE2 & KEVIN J. ECKELBARGER3 1Marine & Coastal Center, AECOM Environment, Woods Hole, MA 02543 USA. E-mail: [email protected] 2Institute of Marine & Coastal Sciences, Rutgers University, New Brunswick, NJ 08901 USA. E-mail: [email protected] 3Darling Marine Center, University of Maine, Walpole, ME 04573 USA. E-mail: [email protected] 4Corresponding author Abstract This paper provides a morphological description of Capitella teleta sp. nov., an opportunistic capitellid that is also commonly used as an experimental polychaete under the provisional designation Capitella sp. I. The species is widely distributed along the east and west coasts of North America and also reported from Japan and the Mediterranean. The species belongs to a group having distinct sexual dimorphism, yet with hermaphrodites occurring under certain conditions. Morphologically, C. teleta has a long, narrow body, with all thoracic segments similar except for sexual modifications on setigers 8–9; the prostomium/peristomium combined are long, narrow and about 2.5 times as long as setiger 1. Capillary setae are present in noto- and neuropodia of setigers 1–7; setigers 8–9 have hooded hooks in noto- and neuropodia of females; genital spines replace notopodial hooks in males. A methyl green staining pattern is limited to some thoracic setigers of females; males lack a distinct staining pattern. -
Genes with Spiralian-Specific Protein Motifs Are Expressed In
ARTICLE https://doi.org/10.1038/s41467-020-17780-7 OPEN Genes with spiralian-specific protein motifs are expressed in spiralian ciliary bands Longjun Wu1,6, Laurel S. Hiebert 2,7, Marleen Klann3,8, Yale Passamaneck3,4, Benjamin R. Bastin5, Stephan Q. Schneider 5,9, Mark Q. Martindale 3,4, Elaine C. Seaver3, Svetlana A. Maslakova2 & ✉ J. David Lambert 1 Spiralia is a large, ancient and diverse clade of animals, with a conserved early developmental 1234567890():,; program but diverse larval and adult morphologies. One trait shared by many spiralians is the presence of ciliary bands used for locomotion and feeding. To learn more about spiralian- specific traits we have examined the expression of 20 genes with protein motifs that are strongly conserved within the Spiralia, but not detectable outside of it. Here, we show that two of these are specifically expressed in the main ciliary band of the mollusc Tritia (also known as Ilyanassa). Their expression patterns in representative species from five more spiralian phyla—the annelids, nemerteans, phoronids, brachiopods and rotifers—show that at least one of these, lophotrochin, has a conserved and specific role in particular ciliated structures, most consistently in ciliary bands. These results highlight the potential importance of lineage-specific genes or protein motifs for understanding traits shared across ancient lineages. 1 Department of Biology, University of Rochester, Rochester, NY 14627, USA. 2 Oregon Institute of Marine Biology, University of Oregon, Charleston, OR 97420, USA. 3 Whitney Laboratory for Marine Bioscience, University of Florida, 9505 Ocean Shore Blvd., St. Augustine, FL 32080, USA. 4 Kewalo Marine Laboratory, PBRC, University of Hawaii, 41 Ahui Street, Honolulu, HI 96813, USA.