International Journal of Molecular Sciences Article Molecular Structure and Phylogenetic Analyses of Complete Chloroplast Genomes of Two Aristolochia Medicinal Species Jianguo Zhou 1, Xinlian Chen 1, Yingxian Cui 1, Wei Sun 2, Yonghua Li 3, Yu Wang 1, Jingyuan Song 1 and Hui Yao 1,* ID 1 Key Lab of Chinese Medicine Resources Conservation, State Administration of Traditional Chinese Medicine of the People’s Republic of China, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China;
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[email protected]; Tel.: +86-10-5783-3194 Received: 27 July 2017; Accepted: 20 August 2017; Published: 24 August 2017 Abstract: The family Aristolochiaceae, comprising about 600 species of eight genera, is a unique plant family containing aristolochic acids (AAs). The complete chloroplast genome sequences of Aristolochia debilis and Aristolochia contorta are reported here. The results show that the complete chloroplast genomes of A. debilis and A. contorta comprise circular 159,793 and 160,576 bp-long molecules, respectively and have typical quadripartite structures. The GC contents of both species were 38.3% each. A total of 131 genes were identified in each genome including 85 protein-coding genes, 37 tRNA genes, eight rRNA genes and one pseudogene (ycf1).