Jaguar and Kraken -The World's Most Powerful Computer Systems
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New CSC Computing Resources
New CSC computing resources Atte Sillanpää, Nino Runeberg CSC – IT Center for Science Ltd. Outline CSC at a glance New Kajaani Data Centre Finland’s new supercomputers – Sisu (Cray XC30) – Taito (HP cluster) CSC resources available for researchers CSC presentation 2 CSC’s Services Funet Services Computing Services Universities Application Services Polytechnics Ministries Data Services for Science and Culture Public sector Information Research centers Management Services Companies FUNET FUNET and Data services – Connections to all higher education institutions in Finland and for 37 state research institutes and other organizations – Network Services and Light paths – Network Security – Funet CERT – eduroam – wireless network roaming – Haka-identity Management – Campus Support – The NORDUnet network Data services – Digital Preservation and Data for Research Data for Research (TTA), National Digital Library (KDK) International collaboration via EU projects (EUDAT, APARSEN, ODE, SIM4RDM) – Database and information services Paituli: GIS service Nic.funet.fi – freely distributable files with FTP since 1990 CSC Stream Database administration services – Memory organizations (Finnish university and polytechnics libraries, Finnish National Audiovisual Archive, Finnish National Archives, Finnish National Gallery) 4 Current HPC System Environment Name Louhi Vuori Type Cray XT4/5 HP Cluster DOB 2007 2010 Nodes 1864 304 CPU Cores 10864 3648 Performance ~110 TFlop/s 34 TF Total memory ~11 TB 5 TB Interconnect Cray QDR IB SeaStar Fat tree 3D Torus CSC -
Petaflops for the People
PETAFLOPS SPOTLIGHT: NERSC housands of researchers have used facilities of the Advanced T Scientific Computing Research (ASCR) program and its EXTREME-WEATHER Department of Energy (DOE) computing predecessors over the past four decades. Their studies of hurricanes, earthquakes, NUMBER-CRUNCHING green-energy technologies and many other basic and applied Certain problems lend themselves to solution by science problems have, in turn, benefited millions of people. computers. Take hurricanes, for instance: They’re They owe it mainly to the capacity provided by the National too big, too dangerous and perhaps too expensive Energy Research Scientific Computing Center (NERSC), the Oak to understand fully without a supercomputer. Ridge Leadership Computing Facility (OLCF) and the Argonne Leadership Computing Facility (ALCF). Using decades of global climate data in a grid comprised of 25-kilometer squares, researchers in These ASCR installations have helped train the advanced Berkeley Lab’s Computational Research Division scientific workforce of the future. Postdoctoral scientists, captured the formation of hurricanes and typhoons graduate students and early-career researchers have worked and the extreme waves that they generate. Those there, learning to configure the world’s most sophisticated same models, when run at resolutions of about supercomputers for their own various and wide-ranging projects. 100 kilometers, missed the tropical cyclones and Cutting-edge supercomputing, once the purview of a small resulting waves, up to 30 meters high. group of experts, has trickled down to the benefit of thousands of investigators in the broader scientific community. Their findings, published inGeophysical Research Letters, demonstrated the importance of running Today, NERSC, at Lawrence Berkeley National Laboratory; climate models at higher resolution. -
Red Storm Infrastructure at Sandia National Laboratories
Red Storm Infrastructure Robert A. Ballance, John P. Noe, Milton J. Clauser, Martha J. Ernest, Barbara J. Jennings, David S. Logsted, David J. Martinez, John H. Naegle, and Leonard Stans Sandia National Laboratories∗ P.O. Box 5800 Albquuerque, NM 87185-0807 May 13, 2005 Abstract Large computing systems, like Sandia National Laboratories’ Red Storm, are not deployed in isolation. The computer, its infrastructure support, and the operations of both have to be designed to support the mission of the or- ganization. This talk and paper will describe the infrastructure and operational requirements of Red Storm along with a discussion of how Sandia is meeting those requirements. It will include discussions of the facilities that surround and support Red Storm: shelter, power, cooling, security, networking, interactions with other Sandia platforms and capabilities, operations support, and user services. 1 Introduction mary components: Stewart Brand, in How Buildings Learn[Bra95], has doc- 1. The physical setting, such as buildings, power, and umented many of the ways in which buildings — often cooling, thought to be static structures – evolve over time to meet the needs of their occupants and the constraints of their 2. The computational setting which includes the re- environments. Machines learn in the same way. This is lated computing systems that support ASC efforts not the learning of “Machine learning” in Artificial Intel- on Red Storm, ligence; it is the very human result of making a machine 3. The networking setting that ties all of these to- smarter as it operates within its distinct environment. gether, and Deploying a large computational resource teaches many lessons, including the need to meet the expecta- 4. -
Merrimac – High-Performance and Highly-Efficient Scientific Computing with Streams
MERRIMAC – HIGH-PERFORMANCE AND HIGHLY-EFFICIENT SCIENTIFIC COMPUTING WITH STREAMS A DISSERTATION SUBMITTED TO THE DEPARTMENT OF ELECTRICAL ENGINEERING AND THE COMMITTEE ON GRADUATE STUDIES OF STANFORD UNIVERSITY IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY Mattan Erez May 2007 c Copyright by Mattan Erez 2007 All Rights Reserved ii I certify that I have read this dissertation and that, in my opinion, it is fully adequate in scope and quality as a dissertation for the degree of Doctor of Philosophy. (William J. Dally) Principal Adviser I certify that I have read this dissertation and that, in my opinion, it is fully adequate in scope and quality as a dissertation for the degree of Doctor of Philosophy. (Patrick M. Hanrahan) I certify that I have read this dissertation and that, in my opinion, it is fully adequate in scope and quality as a dissertation for the degree of Doctor of Philosophy. (Mendel Rosenblum) Approved for the University Committee on Graduate Studies. iii iv Abstract Advances in VLSI technology have made the raw ingredients for computation plentiful. Large numbers of fast functional units and large amounts of memory and bandwidth can be made efficient in terms of chip area, cost, and energy, however, high-performance com- puters realize only a small fraction of VLSI’s potential. This dissertation describes the Merrimac streaming supercomputer architecture and system. Merrimac has an integrated view of the applications, software system, compiler, and architecture. We will show how this approach leads to over an order of magnitude gains in performance per unit cost, unit power, and unit floor-space for scientific applications when compared to common scien- tific computers designed around clusters of commodity general-purpose processors. -
Cray XT and Cray XE Y Y System Overview
Crayyy XT and Cray XE System Overview Customer Documentation and Training Overview Topics • System Overview – Cabinets, Chassis, and Blades – Compute and Service Nodes – Components of a Node Opteron Processor SeaStar ASIC • Portals API Design Gemini ASIC • System Networks • Interconnection Topologies 10/18/2010 Cray Private 2 Cray XT System 10/18/2010 Cray Private 3 System Overview Y Z GigE X 10 GigE GigE SMW Fibre Channels RAID Subsystem Compute node Login node Network node Boot /Syslog/Database nodes 10/18/2010 Cray Private I/O and Metadata nodes 4 Cabinet – The cabinet contains three chassis, a blower for cooling, a power distribution unit (PDU), a control system (CRMS), and the compute and service blades (modules) – All components of the system are air cooled A blower in the bottom of the cabinet cools the blades within the cabinet • Other rack-mounted devices within the cabinet have their own internal fans for cooling – The PDU is located behind the blower in the back of the cabinet 10/18/2010 Cray Private 5 Liquid Cooled Cabinets Heat exchanger Heat exchanger (XT5-HE LC only) (LC cabinets only) 48Vdc flexible Cage 2 buses Cage 2 Cage 1 Cage 1 Cage VRMs Cage 0 Cage 0 backplane assembly Cage ID controller Interconnect 01234567 Heat exchanger network cable Cage inlet (LC cabinets only) connection air temp sensor Airflow Heat exchanger (slot 3 rail) conditioner 48Vdc shelf 3 (XT5-HE LC only) 48Vdc shelf 2 L1 controller 48Vdc shelf 1 Blower speed controller (VFD) Blooewer PDU line filter XDP temperature XDP interface & humidity sensor -
Developing Integrated Data Services for Cray Systems with a Gemini Interconnect
Developing Integrated Data Services for Cray Systems with a Gemini Interconnect Ron A. Oldeld Todd Kordenbrock Jay Lofstead May 1, 2012 Abstract Over the past several years, there has been increasing interest in injecting a layer of compute resources between a high-performance computing application and the end storage devices. For some projects, the objective is to present the parallel le system with a reduced set of clients, making it easier for le-system vendors to support extreme-scale systems. In other cases, the objective is to use these resources as staging areas to aggregate data or cache bursts of I/O operations. Still others use these staging areas for in-situ analysis on data in-transit between the application and the storage system. To simplify our discussion, we adopt the general term Integrated Data Services to represent these use-cases. This paper describes how we provide user-level, integrated data services for Cray systems that use the Gemini Interconnect. In particular, we describe our implementation and performance results on the Cray XE6, Cielo, at Los Alamos National Laboratory. 1 Introduction den on the le system and potentially improve over- all ecency of the application workow. Current In our quest toward exascale systems and applica- work to enable these coupling and workow scenar- tions, one topic that is frequently discussed is the ios are focused on the data issues to resolve resolu- need for more exible execution models. Current tion and mesh mismatches, time scale mismatches, models for capability class high-performance comput- and make data available through data staging tech- ing (HPC) systems are essentially static, requiring niques [20, 34, 21, 11, 2, 40, 10]. -
Pubtex Output 2006.05.15:1001
Cray XD1™ Release Description Private S–2453–14 © 2006 Cray Inc. All Rights Reserved. Unpublished Private Information. This unpublished work is protected to trade secret, copyright and other laws. Except as permitted by contract or express written permission of Cray Inc., no part of this work or its content may be used, reproduced or disclosed in any form. U.S. GOVERNMENT RESTRICTED RIGHTS NOTICE The Computer Software is delivered as "Commercial Computer Software" as defined in DFARS 48 CFR 252.227-7014. All Computer Software and Computer Software Documentation acquired by or for the U.S. Government is provided with Restricted Rights. Use, duplication or disclosure by the U.S. Government is subject to the restrictions described in FAR 48 CFR 52.227-14 or DFARS 48 CFR 252.227-7014, as applicable. Technical Data acquired by or for the U.S. Government, if any, is provided with Limited Rights. Use, duplication or disclosure by the U.S. Government is subject to the restrictions described in FAR 48 CFR 52.227-14 or DFARS 48 CFR 252.227-7013, as applicable. Autotasking, Cray, Cray Channels, Cray Y-MP, GigaRing, LibSci, UNICOS and UNICOS/mk are federally registered trademarks and Active Manager, CCI, CCMT, CF77, CF90, CFT, CFT2, CFT77, ConCurrent Maintenance Tools, COS, Cray Ada, Cray Animation Theater, Cray APP, Cray Apprentice2, Cray C++ Compiling System, Cray C90, Cray C90D, Cray CF90, Cray EL, Cray Fortran Compiler, Cray J90, Cray J90se, Cray J916, Cray J932, Cray MTA, Cray MTA-2, Cray MTX, Cray NQS, Cray Research, Cray SeaStar, Cray S-MP, -
Cray XT3/XT4 Software
Cray XT3/XT4 Software: Status and Plans David Wallace Cray Inc ABSTRACT: : This presentation will discuss the current status of software and development plans for the CRAY XT3 and XT4 systems. A review of major milestones and accomplishments over the past year will be presented. KEYWORDS: ‘Cray XT3’, ‘Cray XT4’, software, CNL, ‘compute node OS’, Catamount/Qk processors, support for larger system configurations (five 1. Introduction rows and larger), a new version of SuSE Linux and CFS Lustre as well as a host of other new features and fixes to The theme for CUG 2007 is "New Frontiers ," which software deficiencies. Much has been done in terms of reflects upon how the many improvements in High new software releases and adding support for new Performance Computing have significantly facilitated hardware. advances in Technology and Engineering. UNICOS/lc is 2.1 UNICOS/lc Releases moving to new frontiers as well. The first section of this paper will provide a perspective of the major software The last twelve months have been very busy with milestones and accomplishments over the past twelve respect to software releases. Two major releases months. The second section will discuss the current status (UNICOS/lc 1.4 and 1.5) and almost weekly updates have of the software with respect to development, releases and provided a steady stream of new features, enhancements support. The paper will conclude with a view of future and fixes to our customers. UNICOS/lc 1.4 was released software plans. for general availability in June 2006. A total of fourteen minor releases have been released since last June. -
The Gemini Network
The Gemini Network Rev 1.1 Cray Inc. © 2010 Cray Inc. All Rights Reserved. Unpublished Proprietary Information. This unpublished work is protected by trade secret, copyright and other laws. Except as permitted by contract or express written permission of Cray Inc., no part of this work or its content may be used, reproduced or disclosed in any form. Technical Data acquired by or for the U.S. Government, if any, is provided with Limited Rights. Use, duplication or disclosure by the U.S. Government is subject to the restrictions described in FAR 48 CFR 52.227-14 or DFARS 48 CFR 252.227-7013, as applicable. Autotasking, Cray, Cray Channels, Cray Y-MP, UNICOS and UNICOS/mk are federally registered trademarks and Active Manager, CCI, CCMT, CF77, CF90, CFT, CFT2, CFT77, ConCurrent Maintenance Tools, COS, Cray Ada, Cray Animation Theater, Cray APP, Cray Apprentice2, Cray C90, Cray C90D, Cray C++ Compiling System, Cray CF90, Cray EL, Cray Fortran Compiler, Cray J90, Cray J90se, Cray J916, Cray J932, Cray MTA, Cray MTA-2, Cray MTX, Cray NQS, Cray Research, Cray SeaStar, Cray SeaStar2, Cray SeaStar2+, Cray SHMEM, Cray S-MP, Cray SSD-T90, Cray SuperCluster, Cray SV1, Cray SV1ex, Cray SX-5, Cray SX-6, Cray T90, Cray T916, Cray T932, Cray T3D, Cray T3D MC, Cray T3D MCA, Cray T3D SC, Cray T3E, Cray Threadstorm, Cray UNICOS, Cray X1, Cray X1E, Cray X2, Cray XD1, Cray X-MP, Cray XMS, Cray XMT, Cray XR1, Cray XT, Cray XT3, Cray XT4, Cray XT5, Cray XT5h, Cray Y-MP EL, Cray-1, Cray-2, Cray-3, CrayDoc, CrayLink, Cray-MP, CrayPacs, CrayPat, CrayPort, Cray/REELlibrarian, CraySoft, CrayTutor, CRInform, CRI/TurboKiva, CSIM, CVT, Delivering the power…, Dgauss, Docview, EMDS, GigaRing, HEXAR, HSX, IOS, ISP/Superlink, LibSci, MPP Apprentice, ND Series Network Disk Array, Network Queuing Environment, Network Queuing Tools, OLNET, RapidArray, RQS, SEGLDR, SMARTE, SSD, SUPERLINK, System Maintenance and Remote Testing Environment, Trusted UNICOS, TurboKiva, UNICOS MAX, UNICOS/lc, and UNICOS/mp are trademarks of Cray Inc. -
A Cray Manufactured XE6 System Called “HERMIT” at HLRS in Use in Autumn 2011
Press release For release 21/04/2011 More capacity to the PRACE Research Infrastructure: a Cray manufactured XE6 system called “HERMIT” at HLRS in use in autumn 2011 PRACE, the Partnership for Advanced Computing in Europe, adds more capacity to the PRACE Research Infrastructure as the Gauss Centre for Supercomputing (GCS) partner High Performance Computing Center of University Stuttgart (HLRS) will deploy the first installation step of a system called Hermit, a 1 Petaflop/s Cray system in the autumn of 2011. This first installation step is to be followed by a 4-5 Petaflop/s second step in 2013. The contract with Cray includes the delivery of a Cray XE6 supercomputer and the future delivery of Cray's next-generation supercomputer code-named "Cascade." The new Cray system at HLRS will serve as a supercomputing resource for researchers, scientists and engineers throughout Europe. HLRS is one of the leading centers in the European PRACE initiative and is currently the only large European high performance computing (HPC) center to work directly with industrial partners in automotive and aerospace engineering. HLRS is also a key partner of the Gauss Centre for Supercomputing (GCS), which is an alliance of the three major supercomputing centers in Germany that collectively provide one of the largest and most powerful supercomputer infrastructures in the world. "Cray is just the right partner as we enter the era of petaflops computing. Together with Cray's outstanding supercomputing technology, our center will be able to carry through the new initiative for engineering and industrial simulation. This is especially important as we work at the forefront of electric mobility and sustainable energy supply", said prof. -
Cray DVS: Data Virtualization Service
Cray DVS: Data Virtualization Service Stephen Sugiyama and David Wallace, Cray Inc. ABSTRACT: Cray DVS, the Cray Data Virtualization Service, is a new capability being added to the XT software environment with the Unicos/lc 2.1 release. DVS is a configurable service that provides compute-node access to a variety of file systems across the Cray high-speed network. The flexibility of DVS makes it a useful solution for many common situations at XT sites, such as providing I/O to compute nodes from NFS file systems. A limited set of use cases will be supported in the initial release but additional features will be added in the future. KEYWORDS: DVS, file systems, network protocol used in the communication layer takes advantage 1. Introduction of the high-performance network. The Cray Data Virtualization Service (Cray DVS) is Most file systems are not capable of supporting a network service that provides compute nodes hundreds or thousands or tens of thousands file system transparent access to file systems mounted on service clients. With DVS, there may be thousands of clients that nodes. DVS projects file systems mounted on service connect to a small number of DVS servers; the underlying nodes to the compute nodes: the remote file system file system sees only the aggregated requests from the appears to be local to applications running on the DVS servers. compute nodes. This solves several common problems: • Access to multiple file systems in the data center 2. Architecture • Resource overhead of file system clients on the The Cray XT series of supercomputers contain compute nodes compute nodes and service nodes. -
Accelerators in Cray's Adaptive Supercomputing
Accelerators in Cray's Adaptive Supercomputing NCSA’s Reconfigurable Systems Summer Institute Dave Strenski Application Analyst [email protected] What does a petaflop look like? Theoretical Performance with 10 Gflop/s Nodes 1000 900 800 700 600 Tflop/s 500 400 300 200 1.00000 0.99999 100 0.99990 0.99900 % Parallel 0 0.99000 1 10 0.90000 100 1000 10000 0.00000 Number of Nodes 100000 May 16, 2007 Copyright 2007 – Cray Inc. 2 Supercomputing is increasingly about managing scalability 16,316 • Exponential increase with advent of multi-core chips • Systems with more than 100,000 10,073 processing cores • 80+ core processor expected within the decade 3,518 2,827 3,093 2,230 1,644 1,847 1,245 1,073 722 808 202 408 1993 1994 1995 1996 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006 Average Number of Processors Per Supercomputer (Top 20) Source: www.top500.org May 16, 2007 Copyright 2007 – Cray Inc. 3 Opportunities to Exploit Heterogeneity Applications vary considerably in their demands Any HPC application contains some form of parallelism • Many HPC apps have rich, SIMD-style data-level parallelism Can significantly accelerate via vectorization • Those that don’t generally have rich thread-level parallelism Can significantly accelerate via multithreading • Some parts of applications are not parallel at all Need fast serial scalar execution speed (Amdahl’s Law) Applications also vary in their communications needs • Required memory bandwidth and granularity Some work well out of cache, some don’t • Required network bandwidth and granularity Some ok with message passing , some need shared memory No one processor/system design is best for all apps May 16, 2007 Copyright 2007 – Cray Inc.