PlantGen2019 The Fifth International Scientific Conference Plant Genetics, Genomics, Bioinformatics, and Biotechnology Novosibirsk, russia JuNe 24–29, 2019 Organizers Institute of Cytology and Genetics SB RAS (ICG SB RAS) Novosibirsk State University (NSU) Ministry of Science and Higher Education of the Russian Federation (Minobrnauki of Russia) The Vavilov Society of Geneticists and Breeders (VSGB) The Vavilov Society of Geneticists and Breeders (Novosibirsk Branch) EUCARPIA (European Association for Research on Plant Breeding) Sponsors Грант Российского фонда Целевая субсидия НГУ (Проект 5-100) фундаментальных исследований Минобрнауки России (РФФИ) № 19-04-20015 Silver Sponsors ООО «Максим МЕДИКАл» Представительство компании «АППлАйД Биосистемс ИНТЕРНэШНл, ИНК.» АО «ТЕРМО ФИШЕР САйЕНТИФИК» ООО «СИНТОл» Basic Sponsors ООО «РОШ ООО «АКСИОМА ДИАГНОСТИКА РУС» БИО» ООО «ХИММЕД ООО «ДИАЭМ» СИБИРЬ» ООО «БИОСАН» Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences Novosibirsk State University PLANT GENETICS, GENOMICS, BIOINFORMATICS, AND BIOTECHNOLOGY (PlantGen2019) The Fifth International Scientific Conference Abstracts June 24–29, 2019 Novosibirsk, Russia Editors: Corr. Member of the RAS Alexey V. Kochetov Professor, Dr. Sci. Elena A. Salina Novosibirsk ICG SB RAS 2019 УДК 575 P71 Plant Genetics, Genomics, Bioinformatics, and Biotechnology (PlantGen2019) : The Fifth International Scientific Conference (June 24–29, 2019, Novosibirsk, Russia); Abstracts / Eds. A.V. Ko chetov, E.A. Salina. Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences; – Novosibirsk: ICG SB RAS, 2019. – 255 pp. – ISBN 987-5-91291-047-0. International program committee Alexey Kochetov, Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia (Conference Chair) Elena Salina, Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia (Conference Сo-Chair) Vladimir Shumny, Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia Nikolay Kolchanov, Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia Andreas Börner, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany Yerlan Turuspekov, Institute of Plant Biology and Biotechnology, Almaty, Kazakhstan Konstantin V. Krutovsky, Georg August University of Göttingen, Göttingen, Germany Olga Afanasenko, All-Russian Institute of Plant Protection, St. Petersburg, Russia Philipp B. Gannibal, All-Russian Institute of Plant Protection, St. Petersburg, Russia Tatjana Gavrilenko, Federal Research Center the N.I. Vavilov All-Russian Institute of Plant Genetic Resources, St. Petersburg, Russia Elena Khlestkina, Federal Research Center the N.I. Vavilov All-Russian Institute of Plant Genetic Resources, St. Petersburg, Russia Igor Tikhonovich, All-Russian Research Institute for Agricultural Microbiology, St. Petersburg, Russia Gennady Karlov, All-Russian Research Institute of Agricultural Biotechnology, Moscow, Russia Alexander M. Kudriavtsev, Vavilov Institute of General Genetics, RAS, Moscow, Russia Elena Kochieva, Federal Research Center Fundamentals of Biotechnology, RAS, Moscow, Russia Nikolai Kashevarov, Siberian Federal Scientific Center of Agrobiotechnologies, RAS, Krasnoobsk, Novosibirsk region, Russia Alexander Zhuchenko, All-Russian Breeding and Technological Institute of Horticulture and Nursery, Moscow, Russia Vladimir Kosolapov, Federal Williams Research Center of Forage Production and Agroecology, Lobnya, Moscow region, Russia Nikolay Goncharov, Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia Local organizing committee Volunteers Elena Salina, ICG SB RAS (Chairperson) Maria Bragina, ICG SB RAS Svetlana Zubova, ICG SB RAS (Сo-Chairperson) Vladislav Dolgih, ICG SB RAS Olga Petrovskaya, ICG SB RAS Anastasiya Glagoleva, ICG SB RAS Svetlana Kalachikova, ICG SB RAS Vasily Kelbin, ICG SB RAS Dina Loginova, ICG SB RAS Antonina Kiseleva, ICG SB RAS Olga Znak, ICG SB RAS Dina Loginova, ICG SB RAS Nadezhda Glebova, ICG SB RAS Maremyana Prokopjeva, NSU Tatyana Karamysheva, ICG SB RAS Evgeniya Puhovaja, ICG SB RAS Fedor Kazantsev, ICG SB RAS Liliya Shayakhmetova, ICG SB RAS Alina Morkovina, ICG SB RAS Matvey Tomilin, ICG SB RAS Erlan Tokpanov, ICG SB RAS Igor Totskiy, ICG SB RAS Larisa Eliseeva, ICG SB RAS Andrey Kharkevich, ICG SB RAS Tatyana Chalkova, ICG SB RAS Aleksandr Ovsienko, NSU Contacts Yana Vasilevskaya, NSU e-mail: [email protected] Anastasia Klimenok, NSU conf.bionet.nsc.ru/plantgen2019 ISBN 978-5-91291-047-0 © ICG SB RAS, 2019 Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia Director: Corr. Member of the RAS Alexey V. Kochetov Academic Director: Professor, Full Member of the RAS Nikolay A. Kolchanov Academic Secretary: Candidate of Science (Biology) Galina V. Orlova Phone: +7(383) 363-49-85 ext. 1336; e-mail: [email protected], [email protected] The Institute was founded in 1957, among the first institutions of the Siberian Branch of the Russian Academy of Sciences. It is situated in the Novosibirsk Akademgorodok. Presently, ICG SB RAS is an interdisciplinary biological center, which ranks among the leading biological institutions in Russia. The second step of the restructuring of the Federal Research Center Institute of Cytology and Genetics was completed in May 2017. Presently, ICG includes three affiliated branches: 1) Siberian Research Institute of Plant Production and Breeding (SibRIPPB). The institute is located in Krasnoobsk Village and the Novosibirsk rural area. It conducts academic, prospective, and applied studies including the collection, examination, preservation, and utilization of plant genetic resources for obtaining new biological knowledge; expansion and improvement of crop gene pools; 2) Research Institute of Clinical and Experimental Lymphology (RICEL); 3) Research Institute of Internal and Preventive Medicine (RIIPM). RICEL and RIIPM are situated in the Sovetskiy and Oktyabr'skiy districts of Novosibirsk. They conduct academic, prospective, and applied studies in molecular medicine and human genetics. They also provide medical care. Tasks of ICG SB RAS: Solution of top-priority problems in the development of the Russian science and technology sector in plant genetics and breeding, animal genetics and breeding, human genetics, biotechnology, and fundamental medicine by applying methods of molecular genetics, cell biology, and computational biology. Strategic goal: Integrated studies in plant genetics and breeding, animal genetics and breeding, human genetics, fundamental medicine, and biotechnology by applying methods of molecular genetics, cell biology, and computational biology from the generation of academic knowledge to the solution of top priority problems set by Russian agricultural, biotechnological, biomedical, and pharmaceutical industries. Staff: As on January 1, 2019, ICG included 89 scientific units, which employed 1354 members; of them 487 researchers, 2 RAS Advisors, 8 Full Members of the RAS, 4 Corresponding Members of the RAS, 93 Doctors of Science, and 342 Candidates of Science. Postgraduate education and residency training: As on January 1, 2019, ICG trains 97 postgraduates. Publications: The Institute ranks among acknowledged leaders in Russian biology. Numerous works of its researchers are published in Russian and foreign academic journals. In 2018, the overall number of publications in peer-reviewed periodicals exceeded 530. The overall number of ICG publications indexed in the Web of Science Core Collection was 402. In 2018, papers of the researchers of the Institute received over 4412 citations accounted by WoS. Auxiliaries: Core facility “Center for Genetic Resources of Laboratory Animals”, which includes the unique research unit “SPF vivarium”, and seven shared access centers (www.bionet.nsc.ru/ uslugi/). Institute of Cytology and Genetics is the founder of the following journals (mass media): Vavilov Journal of Genetics and Breeding, Letters to Vavilov Journal of Genetics and Breeding, Atherosclerosis, Siberian Scientific Medical Journal, and Live Science. The Federal Research Center Institute of Cytology and Genetics is looking to cooperate with scientific and commercial enterprises. Address: Prospekt Lavrentyeva 10, Novosibirsk, 630090 Russia; phone: +7(383) 363-49-80; fax: +7(383) 333-12-78; URL: www.bionet.nsc.ru; e-mail: [email protected] Contents Screening sugar beet samples for the presence of bolting gene. Abekova A.M., Yerzhebayeva R.S., Konysbekov K.T., Bersimbaeva G.Kh. 19 Genetic resources in creating sustainable diseases of introgressive spring wheat forms. Abugaliyeva A.I., Morgounov A.I., Kozhakhmetov K., Chudinov V.A., Shamanin V.P., Gultyaeva E.N., Kolomiyec T.M., Rsaliyev A.Sh., Salina E.A. 20 Wheat genetic resources as a raw material for healthy food. Abugaliyeva A.I., Savin T.V. 21 Triticale-wheat hybrid lines with the vaviloid type of spike branching. Adonina I.G., Mehdiyeva S.P., Prokopjeva M.V., Aminov N.Kh., Salina E.A. 22 Wheat–alien introgression breeding: current status and prospects in the 21st century. Adonina I.G., Salina E.A. 23 Analysis of out of the reference transcripts from RNA-seq libraries in crops. Afonnikov D.A., Genaev M.A., Shmakov N.A., Mustafin Z.S., MukhinA.M., Konstantinov D.K., Doroshkov A.V., Lashin S.A. 24 Genome composition and divergence between Russian boreal species in the genus Elymus (Poaceae), as assessed by nuclear gene GBSS1 sequencing. Agafonov A.V., Shabanova (Kobozeva) E.V., Asbaganov