DNA Sequencing Reveals Three New Species of Chamberlainium

DNA Sequencing Reveals Three New Species of Chamberlainium

Botanica Marina 2021; 64(1): 19–40 Research article Courtney A. Puckree-Padua, Paul W. Gabrielson and Gavin W. Maneveldt* DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi https://doi.org/10.1515/bot-2020-0074 are correctly applied; all other non-geniculate coralline Received November 27, 2020; accepted December 18, 2020; names are likely misapplied in South Africa. published online January 6, 2021 Keywords: biogeography; Chamberlainoideae; cryptic Abstract: Three new non-geniculate coralline algal spe- diversity; morpho-anatomy; non-geniculate coralline algae. cies from South Africa are described that were passing under the misapplied name, Spongites yendoi. Based on plastid encoded DNA sequences from psbA and rbcL 1 Introduction markers, these species belong in the subfamily Chamber- lainoideae. The DNA sequences, supported by the morpho- The South African rocky intertidal and shallow subtidal anatomical character of tetrasporangial conceptacle roof zones have both an abundance and diversity of non- development, placed all three species in the genus Cham- geniculate coralline red algae with three (Corallinales, berlainium and not Pneophyllum, the only other genus in Hapalidiales, Sporolithales; Stephenson and Stephenson Chamberlainoideae. In addition to the diagnostic DNA se- 1972; Maneveldt et al. 2008) of the four orders (Corallinales, quences, Chamberlainium capense sp. nov., C. glebosum Corallinapetrales, Hapalidiales, Sporolithales; Jeong et al. sp. nov. and Chamberlainium occidentale sp. nov. may 2020) represented. South Africa has representative species be distinguished by a combination of habit, habitat, from more than half of the currently recognized extant geographic distribution, and several morpho-anatomical genera of non-geniculate coralline red algae, with the order features. Biogeographically all three species are found in Corallinales best represented (Maneveldt et al. 2016). the Benguela Marine Province of South Africa, with Included in this order are species previously placed in C. occidentale being the most widespread. Chamberlainium Spongites and the recently erected Chamberlainium that are glebosum also has a wide, but disjunct distribution particularly widespread and ecologically important in and C. capense is another South African endemic non- South Africa (Chamberlain 1993; Keats et al. 1993; Man- geniculate coralline, whose range is restricted to a 43 km eveldt and Keats 2008; Puckree-Padua et al. 2020b). stretch of coastline. Thus far, DNA sequences from type Based on a multi-gene molecular phylogeny, Rösler specimens of non-geniculate corallines show that only et al. (2016) noted that numerous southern hemisphere those species whose type localities are from South Africa species, assigned to Spongites, did not occur in the same clade with the generitype, Spongites fruticulosus Kützing (type locality: Mediterranean Sea), and would have to be placed in another genus. Caragnano et al. (2018) subse- *Corresponding author: Gavin W. Maneveldt, Department of quently proposed a new genus Chamberlainium and a new Biodiversity and Conservation Biology, University of the Western Cape, P. Bag X17, Bellville 7535, South Africa, subfamily Chamberlainoideae to accommodate sequenced E-mail: [email protected]. https://orcid.org/0000-0002-5656- and named Spongites species from the northeast Pacific 5348 and from South Africa (van der Merwe et al. 2015), making Courtney A. Puckree-Padua, Department of Biodiversity and the new combinations Chamberlainium tumidum (Foslie) Conservation Biology, University of the Western Cape, P. Bag X17, Caragnano, Foetisch, Maneveldt et Payri, Chamberlainium Bellville 7535, South Africa. https://orcid.org/0000-0001-7684-0610 decipiens (Foslie) Caragnano, Foetisch, Maneveldt et Payri Paul W. Gabrielson, Biology Department and Herbarium, University of North Carolina at Chapel Hill, Coker Hall CB 3280, Chapel Hill, NC, and Chamberlainium agulhense (Maneveldt, E.van der 27599-3280, USA. https://orcid.org/0000-0001-9416-1187 Merwe et P.W.Gabrielson) Caragnano, Foetisch, Maneveldt Open Access. © 2020 Courtney A. Puckree-Padua et al., published by De Gruyter. This work is licensed under the Creative Commons Attribution 4.0 International License. 20 C.A. Puckree-Padua et al.: South African species of Chamberlainium et Payri. Two morpho-anatomical characters were pro- ecologically important and abundant epilithic intertidal posed to segregate Chamberlainium from Spongites:1) species along the entire South African coast of roughly diameter of tetra/bisporangial conceptacle chambers 3000 km (Chamberlain 1993; Maneveldt and Keats 2008; (<300 µm for Chamberlainium and >300 µm for Spongites); Maneveldt et al. 2008). The species’ morphological vari- and 2) number of cell layers composing roofs of tetra/bis- ability was largely attributed to variable grazing pressure porangial conceptacles (≤8 cell layers for Chamberlainium and/or to sand scouring (Chamberlain 1993; Maneveldt and >8 for Spongites; Caragnano et al. 2018). The former of and Keats 2008). Recently, DNA sequencing has resolved these characters no longer holds true for separating the seven distinct species passing under S. yendoi in South genera morpho-anatomically (Puckree-Padua et al. 2020b). Africa likely none of which are S. yendoi (Puckree-Padua Until recently, three species were recognized in Spon- et al. 2020b). Three of these species have already been gites in South Africa, based on morpho-anatomy, Spongites treated, Chamberlainium agulhense (Caragnano et al. 2018; impar (Foslie) Y.M.Chamberlain (type locality: Cape van der Merwe et al. 2015), Chamberlainium cochleare Peninsula, Western Cape Province, South Africa), Spongites Puckree-Padua, Haywood, P.W.Gabrielson et Maneveldt, discoideus (Foslie) Penrose et Woelkerling (type locality and Chamberlainium natalense (Foslie) Puckree-Padua, mouth of the Rio Grande, Tierra del Fuego, Argentina), and P.W.Gabrielson et Maneveldt (Puckree-Padua et al. 2020b). Spongites yendoi (Foslie) Y.M.Chamberlain (type locality: Herein we describe, name, and transfer to Chamberlainium Shimoda Harbor, Shimoda Prefecture, Japan). Spon- three additional species. The seventh species, geographi- gites impar was transferred to Chamberlainium as Cham- cally distinct, which also was passing under S. yendoi, will berlainium impar (Foslie) Puckree-Padua, P.W.Gabrielson be transferred later. et Maneveldt (Puckree-Padua et al. 2020b). The lectotype of S. discoideus was sequenced and shown to be distinct from South African specimens given that name and to belong in 2 Materials and methods Pneophyllum to which it was transferred as Pneophyllum discoideum (Foslie) Puckree-Padua, Maneveldt et Specimens were collected during spring low tides from the rocky P.W.Gabrielson (Puckree-Padua et al. 2020a). An existing intertidal and shallow subtidal at various locations along the South name was available for the South African S. discoideus African coastline (Figure 1). Additional specimens from Namibia (southern West Africa), housed in the UWC herbarium, were also specimens, Lithophyllum marlothii (Heydrich) Heydrich, examined. Specimens on bedrock were removed using a geological whose type specimen was also sequenced, and it too was hammer and chisel. Where specimens occurred on pebbles or transferred to Pneophyllum as Pneophyllum marlothii gastropod shells, the entire pebble or shell along with the coralline (Heydrich) Puckree-Padua, P.W.Gabrielson, Hughey et was sampled. Specimens were sorted in the field. For each specimen, fi Maneveldt (Puckree-Padua et al. 2020a). one fragment was air-dried, one placed in silica gel, and one xed in 10% formalin. In South Africa, based on morpho-anatomy, S. yendoi Specimens for sequencing were examined and prepared was considered to be variable in morphology (thin and following Gabrielson et al. (2011) and extracted following Hughey et al. featureless to thick and protuberant) and the most (2001). Voucher specimens were deposited in UWC and NCU. Type Figure 1: Map of South Africa (gray shade), with an inset of False Bay, showing the coastal provinces, the biogeographic marine provinces and the approximate locations of collecting sites (● = Chamberlainium capense, ■ = C. glebosum, : = C. occidentale). C.A. Puckree-Padua et al.: South African species of Chamberlainium 21 specimens were deposited in L (Naturalis, Netherlands, Leiden). and 24 from GenBank) were used in the phylogenetic an- Herbarium acronyms followed Thiers (2020, continuously updated). alyses (Supplementary Table S1). The RAxML and Bayesian Specimens for light microscopy were prepared following Man- analyses, for both the psbA (Figure 2) and rbcL (Figure 3) eveldt and van der Merwe (2012). In cell measurements, length denotes the distance between primary pit connections, and diameter the genes were congruent in resolving Chamberlainium maximum width of the cell lumen at right angles to this. Conceptacle capense sp. nov., Chamberlainium glebosum sp. nov. and measurements followed Adey and Adey (1973). The determination and Chamberlainium occidentale sp. nov. in a monophyletic presentation (i.e., ranges and not averages with standard deviations/ clade in Chamberlainoideae with full support (100% BS/ errors) of all measurements followed Maneveldt et al. (2017). Thallus 1 PP). These three species occurred in a clade with the anatomical terminology followed Chamberlain (1990). Growth form generitype of Chamberlainium, C. tumidum,

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