PDF Output of CLIC (clustering by inferred co-expression) Dataset: Num of genes in input gene set: 93 Total number of genes: 16493 CLIC PDF output has three sections: 1) Overview of Co-Expression Modules (CEMs) Heatmap shows pairwise correlations between all genes in the input query gene set. Red lines shows the partition of input genes into CEMs, ordered by CEM strength. Each row shows one gene, and the brightness of squares indicates its correlations with other genes. Gene symbols are shown at left side and on the top of the heatmap. 2) Details of each CEM and its expansion CEM+ Top panel shows the posterior selection probability (dataset weights) for top GEO series datasets. Bottom panel shows the CEM genes (blue rows) as well as expanded CEM+ genes (green rows). Each column is one GEO series dataset, sorted by their posterior probability of being selected. The brightness of squares indicates the gene's correlations with CEM genes in the corresponding dataset. CEM+ includes genes that co-express with CEM genes in high-weight datasets, measured by LLR score. 3) Details of each GEO series dataset and its expression profile: Top panel shows the detailed information (e.g. title, summary) for the GEO series dataset. Bottom panel shows the background distribution and the expression profile for CEM genes in this dataset. Overview of Co-Expression Modules (CEMs) with Dataset Weighting Scale of average Pearson correlations Num of Genes in Query Geneset: 93. Num of CEMs: 0. 0.0 0.2 0.4 0.6 0.8 1.0 Arfgef1 Gbf1 Rab31 Inpp5k Scoc Ap4b1 Snap25 Pcsk1n Cln3 Slc11a2 Sod3 Cpd Fbxo8 Furin Psd3 Cyth3 Crhr1 Aqp2 Birc6 Pcsk1 Atp7b Bace1 Golph3 Rab10 Prkd1 Chst2 Vamp4 Syt17 Snx9 Dpy30 5430435G22Rik Arfrp1 Atp9a D230025D16Rik Flna 5330417C22Rik Iqsec1 March9 Gsap Bicd1 Gga2 Psd2 Mon2 Gcc2 Smpd4 Optn Clasp2 Becn1 Clip3 Mlana Atp2c1 Lrrk2 Clvs1 Golga1 Rab11a D10Bwg1379e Psd Plekha8 Nmnat2 AI314180 Arfgef2 Iqsec2 Cnst Atp7a Clvs2 Iqsec3 Gga3 Fam109b Rbfox1 Tgfb2 Wipi1 Atp9b March4 Atxn2 Arl1 Cyth1 Cdh1 Rab6a Golga4 Car4 Vamp5 Cyth2 Cby1 Chac1 Stx4a Nbea Scamp1 Cltb Pifo Chst4 Fam109a Psd4 Cyth4 Arfgef1 Gbf1 Rab31 Inpp5k Scoc Ap4b1 Snap25 Pcsk1n Cln3 Slc11a2 Sod3 Cpd Fbxo8 Furin Psd3 Cyth3 Crhr1 Aqp2 Birc6 Pcsk1 Atp7b Bace1 Golph3 Rab10 Prkd1 Chst2 Vamp4 Syt17 Snx9 Dpy30 5430435G22Rik Arfrp1 Atp9a D230025D16Rik Flna 5330417C22Rik Iqsec1 March9 Gsap Bicd1 Gga2 Psd2 Mon2 Gcc2 Smpd4 Optn Clasp2 Singletons Becn1 Clip3 Mlana Atp2c1 Lrrk2 Clvs1 Golga1 Rab11a D10Bwg1379e Psd Plekha8 Nmnat2 AI314180 Arfgef2 Iqsec2 Cnst Atp7a Clvs2 Iqsec3 Gga3 Fam109b Rbfox1 Tgfb2 Wipi1 Atp9b March4 Atxn2 Arl1 Cyth1 Cdh1 Rab6a Golga4 Car4 Vamp5 Cyth2 Cby1 Chac1 Stx4a Nbea Scamp1 Cltb Pifo Chst4 Fam109a Psd4 Cyth4.